AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002810.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002810.01.T01 MTR_1g053270 90.617 373 18 2 44 399 12 384 0.0 680
MsG0180002810.01.T01 MTR_1g007340 71.579 380 83 4 37 399 1 372 0.0 552
MsG0180002810.01.T01 MTR_1g007340 56.552 145 52 3 5 144 342 480 3.54e-39 146
MsG0180002810.01.T01 MTR_1g007325 69.512 246 58 2 161 399 1 236 9.86e-117 340
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002810.01.T01 AT2G33840 72.414 348 77 3 69 399 40 385 0.0 525
MsG0180002810.01.T01 AT1G28350 63.003 373 119 3 44 399 1 371 7.23e-166 483
MsG0180002810.01.T01 AT1G28350 59.564 413 144 6 5 399 341 748 1.33e-160 470
MsG0180002810.01.T01 AT1G28350 63.003 373 119 3 44 399 1 371 7.23e-166 483
MsG0180002810.01.T01 AT1G28350 59.564 413 144 6 5 399 341 748 1.33e-160 470
MsG0180002810.01.T01 AT1G28350 59.564 413 144 6 5 399 275 682 3.14e-161 469
MsG0180002810.01.T01 AT1G28350 65.798 307 86 3 110 399 1 305 2.19e-139 413

Find 87 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGGTTTGCAGGCTTAC+AGG 0.188149 1:+45657381 MsG0180002810.01.T01:intron
TGCTAAGCTTAATAACAAAA+TGG 0.199810 1:+45654555 MsG0180002810.01.T01:CDS
AATTATGTGGTATGCATCTT+TGG 0.229122 1:+45658508 MsG0180002810.01.T01:three_prime_UTR
TTACAGGTGTAGCCAAATTA+TGG 0.234560 1:+45654855 MsG0180002810.01.T01:intron
CTCTTCATCCTCCATGTAAA+TGG 0.251052 1:-45655858 None:intergenic
GCCGCTACTTGATCGAAATT+TGG 0.252289 1:+45654608 MsG0180002810.01.T01:CDS
GTTCACTCCGTCCCATAATT+TGG 0.255447 1:-45654867 None:intergenic
AATTACTGCGGTGCTGGATT+TGG 0.273627 1:-45650884 None:intergenic
ACTTCGACAAAGCCGGTTTA+AGG 0.288565 1:-45656572 None:intergenic
CAATGCAAGCATCAATATAT+AGG 0.304263 1:-45654975 None:intergenic
GGGTTTCCTTCCACAATCTT+TGG 0.305525 1:-45656246 None:intergenic
ATTATGTGGTATGCATCTTT+GGG 0.306769 1:+45658509 MsG0180002810.01.T01:three_prime_UTR
TGCGGTGCTGGATTTGGATT+TGG 0.330970 1:-45650878 None:intergenic
ACAACCTTAAAAGAATTATC+AGG 0.345241 1:+45654746 MsG0180002810.01.T01:CDS
TCCATGTAAATGGATGATAA+AGG 0.366918 1:-45655848 None:intergenic
CCCTTTATCATCCATTTACA+TGG 0.371480 1:+45655847 MsG0180002810.01.T01:CDS
CTGGTTGCCTAGTCAAAATA+TGG 0.374269 1:+45654518 MsG0180002810.01.T01:CDS
TCAAAATATGGATTGCTGAT+TGG 0.384798 1:+45654530 MsG0180002810.01.T01:CDS
AATGCAAGCATCAATATATA+GGG 0.387760 1:-45654974 None:intergenic
TTGAAGAAAATTGAGATTGT+TGG 0.389262 1:+45654586 MsG0180002810.01.T01:CDS
TACAGGTGTAGCCAAATTAT+GGG 0.395127 1:+45654856 MsG0180002810.01.T01:intron
GCTAAGCTTAATAACAAAAT+GGG 0.426202 1:+45654556 MsG0180002810.01.T01:CDS
ATGTTCTGACTATAGACTTC+AGG 0.426285 1:+45657415 MsG0180002810.01.T01:exon
CTTTGGTTTGCAGGCTTACA+GGG 0.434499 1:+45657382 MsG0180002810.01.T01:intron
AGCCGCCGCCGCAGTAGCAC+TGG 0.438411 1:+45650820 MsG0180002810.01.T01:CDS
CCATGTAAATGGATGATAAA+GGG 0.439796 1:-45655847 None:intergenic
TCGAAATTTGGAAAGCCGTT+GGG 0.440768 1:+45654620 MsG0180002810.01.T01:CDS
TTGGAAATATGCAGCCTGTA+AGG 0.446216 1:+45657214 MsG0180002810.01.T01:intron
GAAAGCCGTTGGGATGGATC+TGG 0.454876 1:+45654630 MsG0180002810.01.T01:CDS
TTAAATATCTTATCTTACCT+TGG 0.454939 1:+45656283 MsG0180002810.01.T01:CDS
ATCGAAATTTGGAAAGCCGT+TGG 0.468318 1:+45654619 MsG0180002810.01.T01:CDS
TGTATGAGTTTCAAATTATG+TGG 0.468998 1:+45658495 MsG0180002810.01.T01:three_prime_UTR
ACATCCAGCTGACCTTAAAC+CGG 0.474408 1:+45656560 MsG0180002810.01.T01:CDS
TGGACGAATGCACATTGCTC+AGG 0.484195 1:+45651111 MsG0180002810.01.T01:CDS
TCTTGCCCTTGTTGTAGACC+AGG 0.488474 1:-45655806 None:intergenic
TTTCCTTCCACAATCTTTGG+CGG 0.490487 1:-45656243 None:intergenic
TCAAAACCATCGTAACAAAC+AGG 0.493209 1:-45651082 None:intergenic
TTCAATGACTTCGACAAAGC+CGG 0.497005 1:-45656579 None:intergenic
TGAGTATTGGCCTCTTGTGT+TGG 0.497158 1:+45654708 MsG0180002810.01.T01:CDS
GTGGAGCGTAATGCAGATAA+TGG 0.504803 1:+45656321 MsG0180002810.01.T01:CDS
TGCTGGATTTGGATTTGGAT+TGG 0.505166 1:-45650873 None:intergenic
TTCCTTCCACAATCTTTGGC+GGG 0.512138 1:-45656242 None:intergenic
ATTGAAATTCCGACCGACGC+TGG 0.513517 1:+45650746 MsG0180002810.01.T01:CDS
TGTGGAAGGAAACCCATGCT+TGG 0.518682 1:+45656254 MsG0180002810.01.T01:CDS
ATGCCAGAGCTGATGAGTAT+TGG 0.524296 1:+45654695 MsG0180002810.01.T01:CDS
TATTTAATGTACTCCAAGCA+TGG 0.526777 1:-45656267 None:intergenic
ATGTCAGCACACTGCATGCA+TGG 0.529807 1:-45654922 None:intergenic
ATTTAATGTACTCCAAGCAT+GGG 0.531281 1:-45656266 None:intergenic
TTCCAGTGCTACTGCGGCGG+CGG 0.533461 1:-45650822 None:intergenic
CCTCAGCCTGTTTGTTACGA+TGG 0.535553 1:+45651076 MsG0180002810.01.T01:CDS
TTTGAGATCGTGAGAAGCAT+CGG 0.543232 1:+45651004 MsG0180002810.01.T01:CDS
AAAGCCGGTTTAAGGTCAGC+TGG 0.544325 1:-45656564 None:intergenic
AGGCCAATACTCATCAGCTC+TGG 0.554004 1:-45654698 None:intergenic
TCTATAGTCAGAACATTACT+TGG 0.561058 1:-45657408 None:intergenic
AAAATATATAAATAAAAGGA+GGG 0.563104 1:-45658542 None:intergenic
CATTTACATGGAGGATGAAG+AGG 0.563565 1:+45655859 MsG0180002810.01.T01:CDS
TAACTCTCCGCTTTCATAGT+CGG 0.564786 1:-45656538 None:intergenic
AATTTGGAAAGCCGTTGGGA+TGG 0.569257 1:+45654624 MsG0180002810.01.T01:CDS
TCCAAATTTCGATCAAGTAG+CGG 0.571639 1:-45654609 None:intergenic
CGTGCATAGGTTGTTGAGTG+CGG 0.576234 1:+45650973 MsG0180002810.01.T01:intron
TACTATCGCAATGCCAGCGT+CGG 0.586492 1:-45650759 None:intergenic
ATCGCAATGCCAGCGTCGGT+CGG 0.590400 1:-45650755 None:intergenic
ATGTTACCTGGTCTACAACA+AGG 0.591222 1:+45655800 MsG0180002810.01.T01:CDS
AAGCTTAATAACAAAATGGG+TGG 0.593404 1:+45654559 MsG0180002810.01.T01:CDS
TGCCCGCCAAAGATTGTGGA+AGG 0.597557 1:+45656240 MsG0180002810.01.T01:CDS
CCATCGTAACAAACAGGCTG+AGG 0.597768 1:-45651076 None:intergenic
ATATTGCCCGCCAAAGATTG+TGG 0.598009 1:+45656236 MsG0180002810.01.T01:CDS
GTGAACAAGCTAACATCCGC+TGG 0.599305 1:+45654499 MsG0180002810.01.T01:CDS
GTCATTGAATAAAATTCTAG+AGG 0.600216 1:+45656593 MsG0180002810.01.T01:CDS
TTATGTGGTATGCATCTTTG+GGG 0.607958 1:+45658510 MsG0180002810.01.T01:three_prime_UTR
TCCTTCCAGATCCATCCCAA+CGG 0.609022 1:-45654635 None:intergenic
CAATGATTCCAGTGCTACTG+CGG 0.621909 1:-45650828 None:intergenic
GCAATGTGCATTCGTCCAGA+AGG 0.623405 1:-45651106 None:intergenic
TGGATAGAATATTTGAGCAG+CGG 0.624441 1:-45654902 None:intergenic
GTTGGGATGGATCTGGAAGG+AGG 0.625900 1:+45654637 MsG0180002810.01.T01:CDS
TTGATTGCCGACTATGAAAG+CGG 0.628637 1:+45656531 MsG0180002810.01.T01:CDS
TGTTACCTGGTCTACAACAA+GGG 0.634319 1:+45655801 MsG0180002810.01.T01:CDS
TGAGCTATATCCAACACAAG+AGG 0.641928 1:-45654718 None:intergenic
TTTATCATCCATTTACATGG+AGG 0.642941 1:+45655850 MsG0180002810.01.T01:CDS
TTGGTTTAACGAGTTTACTG+TGG 0.643574 1:+45656302 MsG0180002810.01.T01:CDS
TGATTCCAGTGCTACTGCGG+CGG 0.646365 1:-45650825 None:intergenic
GGTAGATGATGATTCAGCGA+CGG 0.660169 1:-45650852 None:intergenic
GCCGTTGGGATGGATCTGGA+AGG 0.662319 1:+45654634 MsG0180002810.01.T01:CDS
GGTGTAGCCAAATTATGGGA+CGG 0.675643 1:+45654860 MsG0180002810.01.T01:intron
ACAGTAAACTCGTTAAACCA+AGG 0.685168 1:-45656300 None:intergenic
AAAGAGTGAACTTCACCTTG+AGG 0.695572 1:-45654951 None:intergenic
GAGCGTAATGCAGATAATGG+TGG 0.730139 1:+45656324 MsG0180002810.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAATATATAAATAAA+AGG - Chr1:45658549-45658568 None:intergenic 0.0%
!! AAAAAAAACAAAAAAATACA+AGG - Chr1:45651578-45651597 None:intergenic 10.0%
!! AAAAATATATAAATAAAAGG+AGG - Chr1:45658546-45658565 None:intergenic 10.0%
!! AAAATATATAAATAAAAGGA+GGG - Chr1:45658545-45658564 None:intergenic 10.0%
!! AAATAAAAATTAATATCATC+TGG - Chr1:45655476-45655495 None:intergenic 10.0%
!! AATTTAAAAATTTAATGTGA+TGG + Chr1:45656758-45656777 MsG0180002810.01.T01:intron 10.0%
!!! GAATATTTTTATCTTAAAAT+AGG + Chr1:45655590-45655609 MsG0180002810.01.T01:intron 10.0%
!!! GATAAAAAAGTTTTTTTTTT+TGG + Chr1:45653474-45653493 MsG0180002810.01.T01:intron 10.0%
!!! GATAAAAACAATAAAATTTT+GGG + Chr1:45657810-45657829 MsG0180002810.01.T01:intron 10.0%
!!! TGATAAAAACAATAAAATTT+TGG + Chr1:45657809-45657828 MsG0180002810.01.T01:intron 10.0%
!!! TTGGAAATTTTATTATAATA+AGG - Chr1:45656976-45656995 None:intergenic 10.0%
!!! TTTATTGTTTTTATCAATTA+GGG - Chr1:45657805-45657824 None:intergenic 10.0%
!!! TTTTAATTTTTTATGAGTTT+TGG - Chr1:45653628-45653647 None:intergenic 10.0%
!!! TTTTATTGTTTTTATCAATT+AGG - Chr1:45657806-45657825 None:intergenic 10.0%
!!! TTTTTTTTTATGTATATCTA+GGG + Chr1:45654457-45654476 MsG0180002810.01.T01:intron 10.0%
!!! TTTTTTTTTTATGTATATCT+AGG + Chr1:45654456-45654475 MsG0180002810.01.T01:intron 10.0%
!! AAATAATGAAAATTGAAAAC+AGG - Chr1:45650943-45650962 None:intergenic 15.0%
!! AACTCATAAAAAATTAAAAC+TGG + Chr1:45653629-45653648 MsG0180002810.01.T01:intron 15.0%
!! ACTCATAAAAAATTAAAACT+GGG + Chr1:45653630-45653649 MsG0180002810.01.T01:intron 15.0%
!! ATTACTATGTTATTACTTAA+TGG - Chr1:45651398-45651417 None:intergenic 15.0%
!! ATTTAAATAGATATTGAAGA+AGG - Chr1:45653927-45653946 None:intergenic 15.0%
!! TAAAATAAACTATTCTACAT+TGG + Chr1:45651708-45651727 MsG0180002810.01.T01:intron 15.0%
!! TAAATTTGTCATTACTAAAA+AGG + Chr1:45655902-45655921 MsG0180002810.01.T01:intron 15.0%
!! TTCATCCATAAATTTAAATT+CGG - Chr1:45653402-45653421 None:intergenic 15.0%
!!! AAAATGTTGGTTTTTAAAAT+AGG + Chr1:45653657-45653676 MsG0180002810.01.T01:intron 15.0%
!!! AAATGTTGGTTTTTAAAATA+GGG + Chr1:45653658-45653677 MsG0180002810.01.T01:intron 15.0%
!!! AAATTTTAAGAATTAAAGAG+AGG + Chr1:45657708-45657727 MsG0180002810.01.T01:intron 15.0%
!!! AAATTTTAAGAATTAAAGAG+AGG - Chr1:45657727-45657708 None:intergenic 15.0%
!!! AAATTTTGGGAATTAAAAAA+AGG + Chr1:45657823-45657842 MsG0180002810.01.T01:intron 15.0%
!!! AATTTTAAGAATTAAAGAGA+GGG + Chr1:45657709-45657728 MsG0180002810.01.T01:intron 15.0%
!!! AATTTTAAGAATTAAAGAGA+GGG - Chr1:45657728-45657709 None:intergenic 15.0%
!!! AATTTTGGGAATTAAAAAAA+GGG + Chr1:45657824-45657843 MsG0180002810.01.T01:intron 15.0%
!!! AATTTTTGTTCTGTTTTAAT+TGG + Chr1:45651668-45651687 MsG0180002810.01.T01:intron 15.0%
!!! ATTTTCCGAATTTAAATTTA+TGG + Chr1:45653394-45653413 MsG0180002810.01.T01:intron 15.0%
!!! ATTTTTAATTTAGTTGTTGA+AGG + Chr1:45654395-45654414 MsG0180002810.01.T01:intron 15.0%
!!! CATTTTCATATCATAATAAA+AGG - Chr1:45654774-45654793 None:intergenic 15.0%
!!! GATTTCTTTTAAAAATTAAG+AGG - Chr1:45656658-45656677 None:intergenic 15.0%
!!! TACATTTTCAAAAGAATAAA+AGG - Chr1:45651901-45651920 None:intergenic 15.0%
!!! TAGAACAATTATTTTGAATA+GGG - Chr1:45652859-45652878 None:intergenic 15.0%
!!! TATTTTAAAAACCAACATTT+TGG + Chr1:45653159-45653178 MsG0180002810.01.T01:intron 15.0%
!!! TATTTTAAAAACCAACATTT+TGG - Chr1:45653178-45653159 None:intergenic 15.0%
!!! TGTAACATTTTCTTATAAAT+AGG - Chr1:45657012-45657031 None:intergenic 15.0%
!!! TTAGAACAATTATTTTGAAT+AGG - Chr1:45652860-45652879 None:intergenic 15.0%
!!! TTTGAGTTTATTGATTTTAA+TGG + Chr1:45653340-45653359 MsG0180002810.01.T01:intron 15.0%
!! AAAAACCATGTATTCATTTA+TGG - Chr1:45655289-45655308 None:intergenic 20.0%
!! AAAAATATGATTTACACACT+TGG + Chr1:45658245-45658264 MsG0180002810.01.T01:intron 20.0%
!! AAAAATATGATTTACACACT+TGG - Chr1:45658264-45658245 None:intergenic 20.0%
!! AAAACAAAACATAACTAGAT+AGG - Chr1:45655942-45655961 None:intergenic 20.0%
!! AAACTATAAGAAACTAAGAT+GGG - Chr1:45655434-45655453 None:intergenic 20.0%
!! AAAGAATCAAAATTAGATGT+AGG + Chr1:45654229-45654248 MsG0180002810.01.T01:intron 20.0%
!! AAATAGCCCAATTAAAATAA+TGG + Chr1:45658366-45658385 MsG0180002810.01.T01:intron 20.0%
!! AATAGCCCAATTAAAATAAT+GGG + Chr1:45658367-45658386 MsG0180002810.01.T01:intron 20.0%
!! ACAAAAAGCAAAATATTACA+AGG + Chr1:45651820-45651839 MsG0180002810.01.T01:intron 20.0%
!! ACATTTAGTAAACAAAGTAA+AGG - Chr1:45657187-45657206 None:intergenic 20.0%
!! AGTATTATCAGAAAAATAGT+GGG + Chr1:45657045-45657064 MsG0180002810.01.T01:intron 20.0%
!! AGTGAATGTGAAAATAAAAA+AGG + Chr1:45656212-45656231 MsG0180002810.01.T01:CDS 20.0%
!! CTCATAAAAAATTAAAACTG+GGG + Chr1:45653631-45653650 MsG0180002810.01.T01:intron 20.0%
!! CTTCAAGAAGATAATTAAAA+AGG - Chr1:45658063-45658082 None:intergenic 20.0%
!! CTTTATCTTATAATTGAAAC+CGG + Chr1:45653862-45653881 MsG0180002810.01.T01:intron 20.0%
!! GAAACTACTACTATTATAAA+TGG - Chr1:45656393-45656412 None:intergenic 20.0%
!! GTAAAAAAAATTGTCCATTT+AGG + Chr1:45653538-45653557 MsG0180002810.01.T01:intron 20.0%
!! TAGTATTATCAGAAAAATAG+TGG + Chr1:45657044-45657063 MsG0180002810.01.T01:intron 20.0%
!! TTAAATATCTTATCTTACCT+TGG + Chr1:45656283-45656302 MsG0180002810.01.T01:CDS 20.0%
!! TTCATTTATGGAAAAAACTT+AGG - Chr1:45655277-45655296 None:intergenic 20.0%
!! TTTAAATTAACATAGTGCAT+TGG + Chr1:45653940-45653959 MsG0180002810.01.T01:intron 20.0%
!! TTTGATTGTGTAAAAACATA+CGG - Chr1:45654008-45654027 None:intergenic 20.0%
!!! AAAGAAATTTGATAGCAAAT+GGG - Chr1:45651504-45651523 None:intergenic 20.0%
!!! AATAGGATCAACAAATTTTT+TGG - Chr1:45656995-45657014 None:intergenic 20.0%
!!! AATGTTGGTTTTTAAAATAG+AGG - Chr1:45653678-45653659 None:intergenic 20.0%
!!! AATGTTGGTTTTTAAAATAG+GGG + Chr1:45653659-45653678 MsG0180002810.01.T01:intron 20.0%
!!! AGAAAATGTTACAACTTTTA+CGG + Chr1:45657019-45657038 MsG0180002810.01.T01:intron 20.0%
!!! ATGTTGGTTTTTAAAATAGA+GGG - Chr1:45653157-45653176 None:intergenic 20.0%
!!! ATTTTGAATGAAGGAATAAA+AGG + Chr1:45656038-45656057 MsG0180002810.01.T01:intron 20.0%
!!! CAGAAAAATATTTTGAATGA+AGG + Chr1:45656029-45656048 MsG0180002810.01.T01:intron 20.0%
!!! CATTGTTTAGAATACATTTT+TGG + Chr1:45657474-45657493 MsG0180002810.01.T01:intron 20.0%
!!! GATTAATGGAATACTTTTTT+TGG + Chr1:45653452-45653471 MsG0180002810.01.T01:intron 20.0%
!!! TATTTTACTAATTCTAAACG+AGG - Chr1:45657296-45657315 None:intergenic 20.0%
!!! TCTTATCATACAATTAGTTT+AGG - Chr1:45652385-45652404 None:intergenic 20.0%
!!! TTATTCTTTTGAAAATGTAG+AGG + Chr1:45651902-45651921 MsG0180002810.01.T01:intron 20.0%
!!! TTATTGTTTTGTTTTAGTTC+CGG - Chr1:45651760-45651779 None:intergenic 20.0%
!!! TTCTTTTAAAAATTAAGAGG+AGG - Chr1:45656655-45656674 None:intergenic 20.0%
!!! TTGATTTTTGAAGATGTTTT+AGG + Chr1:45653293-45653312 MsG0180002810.01.T01:intron 20.0%
!!! TTTAAGCCAATTTACTTTTT+AGG + Chr1:45653725-45653744 MsG0180002810.01.T01:intron 20.0%
!!! TTTACTAAATGTTTGTTTCT+TGG + Chr1:45657195-45657214 MsG0180002810.01.T01:intron 20.0%
!!! TTTTATTTTCACATTCACTT+CGG - Chr1:45656211-45656230 None:intergenic 20.0%
!!! TTTTTCCATAAATGAATACA+TGG + Chr1:45655281-45655300 MsG0180002810.01.T01:intron 20.0%
! AAATAGCCCAATTAAAACAA+TGG - Chr1:45657551-45657570 None:intergenic 25.0%
! AAATGCATGAATTATTGTTG+TGG - Chr1:45653103-45653122 None:intergenic 25.0%
! AACTAAAAATACACCTTTGT+TGG + Chr1:45655169-45655188 MsG0180002810.01.T01:intron 25.0%
! AAGAAATAAATAAATCGCTG+TGG - Chr1:45654138-45654157 None:intergenic 25.0%
! AAGAATTATCCAACTAATTG+TGG + Chr1:45653028-45653047 MsG0180002810.01.T01:intron 25.0%
! AATAGCCCAATTAAAACAAT+GGG - Chr1:45657550-45657569 None:intergenic 25.0%
! AATGAAAATCTTTACCAGAA+AGG - Chr1:45656097-45656116 None:intergenic 25.0%
! AATGCAAGCATCAATATATA+GGG - Chr1:45654977-45654996 None:intergenic 25.0%
! ACAACCTTAAAAGAATTATC+AGG + Chr1:45654746-45654765 MsG0180002810.01.T01:CDS 25.0%
! ACTATCAGAGAAATAAATGA+AGG + Chr1:45655102-45655121 MsG0180002810.01.T01:intron 25.0%
! AGAAATAAATAAATCGCTGT+GGG - Chr1:45654137-45654156 None:intergenic 25.0%
! AGTATTGTGATGTTATTAAG+AGG + Chr1:45655667-45655686 MsG0180002810.01.T01:intron 25.0%
! AGTTGGATAATTCTTATTGT+AGG - Chr1:45653023-45653042 None:intergenic 25.0%
! ATAGCCCAATTAAAATAATG+GGG + Chr1:45658368-45658387 MsG0180002810.01.T01:intron 25.0%
! ATATATCAAGACTAATTCAG+AGG - Chr1:45652931-45652950 None:intergenic 25.0%
! ATCTTATGGTAGTAATACTA+CGG - Chr1:45654046-45654065 None:intergenic 25.0%
! CAAGGACAAAAAACAAAAAA+TGG + Chr1:45651838-45651857 MsG0180002810.01.T01:intron 25.0%
! CTATCAGAGAAATAAATGAA+GGG + Chr1:45655103-45655122 MsG0180002810.01.T01:intron 25.0%
! CTTAATAATTATAGCAACCT+AGG - Chr1:45652229-45652248 None:intergenic 25.0%
! GAAACTATAAGAAACTAAGA+TGG - Chr1:45655435-45655454 None:intergenic 25.0%
! GAAGAAGGATAAAGAAAAAA+CGG - Chr1:45653912-45653931 None:intergenic 25.0%
! GCTAAGCTTAATAACAAAAT+GGG + Chr1:45654556-45654575 MsG0180002810.01.T01:CDS 25.0%
! GTCATTGAATAAAATTCTAG+AGG + Chr1:45656593-45656612 MsG0180002810.01.T01:CDS 25.0%
! GTTGGATAATTCTTATTGTA+GGG - Chr1:45653022-45653041 None:intergenic 25.0%
! TATAGAATGATCTCCTTATT+AGG + Chr1:45655054-45655073 MsG0180002810.01.T01:intron 25.0%
! TATGAAAATAAGCTGAAAAC+AGG - Chr1:45651152-45651171 None:intergenic 25.0%
! TCAAAAATGATATGCTTGAA+GGG - Chr1:45651614-45651633 None:intergenic 25.0%
! TCAGAACCTAAAAAGTAAAT+TGG - Chr1:45653734-45653753 None:intergenic 25.0%
! TGATAAGAATAGTAATTCAG+AGG + Chr1:45652397-45652416 MsG0180002810.01.T01:intron 25.0%
! TGATGTATCAAGTCTATATT+AGG - Chr1:45653777-45653796 None:intergenic 25.0%
! TGCTAAGCTTAATAACAAAA+TGG + Chr1:45654555-45654574 MsG0180002810.01.T01:CDS 25.0%
! TGTATGAGTTTCAAATTATG+TGG + Chr1:45658495-45658514 MsG0180002810.01.T01:three_prime_UTR 25.0%
! TGTGATTTGATATAAGATTG+TGG + Chr1:45656062-45656081 MsG0180002810.01.T01:intron 25.0%
! TTATTATAATAAGGACCAGA+GGG - Chr1:45656967-45656986 None:intergenic 25.0%
! TTCACAAGTGAAAAAAATGT+AGG - Chr1:45658443-45658462 None:intergenic 25.0%
! TTGAAGAAAATTGAGATTGT+TGG + Chr1:45654586-45654605 MsG0180002810.01.T01:CDS 25.0%
! TTTATTATAATAAGGACCAG+AGG - Chr1:45656968-45656987 None:intergenic 25.0%
!! AACAAACTTTGAGAAAATGA+TGG + Chr1:45655196-45655215 MsG0180002810.01.T01:intron 25.0%
!! AACTCCCTTTTTATGAAAAA+AGG + Chr1:45653688-45653707 MsG0180002810.01.T01:intron 25.0%
!! AATACTACGGAATCATTTTA+AGG - Chr1:45654033-45654052 None:intergenic 25.0%
!! ACTCCCTTTTTATGAAAAAA+GGG + Chr1:45653689-45653708 MsG0180002810.01.T01:intron 25.0%
!! ACTTAATGGTAATGAACAAT+TGG - Chr1:45651384-45651403 None:intergenic 25.0%
!! AGAGATTTGTTCTTTGAAAA+AGG + Chr1:45651930-45651949 MsG0180002810.01.T01:intron 25.0%
!! ATACTACGGAATCATTTTAA+GGG - Chr1:45654032-45654051 None:intergenic 25.0%
!! CAAAGAAATTTGATAGCAAA+TGG - Chr1:45651505-45651524 None:intergenic 25.0%
!! CAGAATTGTCTTATTAGTAT+TGG + Chr1:45656715-45656734 MsG0180002810.01.T01:intron 25.0%
!! CCAATATGAATAAATTTTGC+CGG + Chr1:45651738-45651757 MsG0180002810.01.T01:intron 25.0%
!! TCTCTGATTTTACAATTCTT+TGG + Chr1:45656842-45656861 MsG0180002810.01.T01:intron 25.0%
!!! AATAAGTTGATTATCCAATC+AGG + Chr1:45651237-45651256 MsG0180002810.01.T01:intron 25.0%
!!! ACAATTATTTTGAATAGGGA+TGG - Chr1:45652855-45652874 None:intergenic 25.0%
!!! AGCATATCATTTTTGAGTTT+TGG + Chr1:45651618-45651637 MsG0180002810.01.T01:intron 25.0%
!!! AGTCTTATTAAATTGAGTGA+TGG + Chr1:45652958-45652977 MsG0180002810.01.T01:intron 25.0%
!!! ATACATTTGTTTTCCACTAT+GGG - Chr1:45651263-45651282 None:intergenic 25.0%
!!! ATGTTGGTTTTTAAAATAGG+GGG + Chr1:45653660-45653679 MsG0180002810.01.T01:intron 25.0%
!!! CATTTGCTATCAAATTTCTT+TGG + Chr1:45651503-45651522 MsG0180002810.01.T01:intron 25.0%
!!! TATACATTTGTTTTCCACTA+TGG - Chr1:45651264-45651283 None:intergenic 25.0%
!!! TATTTTAGTCCGTCAAAATA+AGG - Chr1:45651695-45651714 None:intergenic 25.0%
!!! TGGATAATTTTTTCGATCTA+CGG + Chr1:45654277-45654296 MsG0180002810.01.T01:intron 25.0%
!!! TGTTGGTTTTTAAAATAGAG+GGG - Chr1:45653156-45653175 None:intergenic 25.0%
!!! TTAATTGGTCCTTATTTTGA+CGG + Chr1:45651683-45651702 MsG0180002810.01.T01:intron 25.0%
!!! TTAGAAAAGCAATTTTCAAG+TGG + Chr1:45657154-45657173 MsG0180002810.01.T01:intron 25.0%
AAACTTAGGTGCAATTCTTT+AGG + Chr1:45655128-45655147 MsG0180002810.01.T01:intron 30.0%
AAAGATGCATAAACATAACC+AGG - Chr1:45656627-45656646 None:intergenic 30.0%
AAATAAATAAATCGCTGTGG+GGG - Chr1:45654135-45654154 None:intergenic 30.0%
AAGCTTAATAACAAAATGGG+TGG + Chr1:45654559-45654578 MsG0180002810.01.T01:CDS 30.0%
AAGGATAAAGAAAAAACGGT+TGG - Chr1:45653908-45653927 None:intergenic 30.0%
AATAACATCACAATACTCTC+TGG - Chr1:45655664-45655683 None:intergenic 30.0%
AATCTTCATCTCTTCATCAA+TGG - Chr1:45653436-45653455 None:intergenic 30.0%
AATGAACAATTGGAAAACCT+TGG - Chr1:45651374-45651393 None:intergenic 30.0%
AATTATGTGGTATGCATCTT+TGG + Chr1:45658508-45658527 MsG0180002810.01.T01:three_prime_UTR 30.0%
ACACAATTAGGAAAAGATAG+GGG + Chr1:45658400-45658419 MsG0180002810.01.T01:intron 30.0%
ACACAATTGGAAAAAGATAG+GGG - Chr1:45657517-45657536 None:intergenic 30.0%
ACTACCATAAGATTCAATAC+TGG + Chr1:45654053-45654072 MsG0180002810.01.T01:intron 30.0%
ATAAATGAAGGGCAAAACTT+AGG + Chr1:45655114-45655133 MsG0180002810.01.T01:intron 30.0%
ATAGCCCAATTAAAACAATG+GGG - Chr1:45657549-45657568 None:intergenic 30.0%
ATCAACTTATTTGCAGCTTA+CGG - Chr1:45651228-45651247 None:intergenic 30.0%
ATCTCTACTATCTATGTACT+AGG + Chr1:45656675-45656694 MsG0180002810.01.T01:intron 30.0%
ATGAACAATTGGAAAACCTT+GGG - Chr1:45651373-45651392 None:intergenic 30.0%
ATTATGTGGTATGCATCTTT+GGG + Chr1:45658509-45658528 MsG0180002810.01.T01:three_prime_UTR 30.0%
ATTTAATGTACTCCAAGCAT+GGG - Chr1:45656269-45656288 None:intergenic 30.0%
CAAAAAATGGTAAACTTGCA+GGG - Chr1:45651547-45651566 None:intergenic 30.0%
CAAGGACTTAAACCAAAAAA+TGG - Chr1:45651560-45651579 None:intergenic 30.0%
CAATGCAAGCATCAATATAT+AGG - Chr1:45654978-45654997 None:intergenic 30.0%
CACACAATTAGGAAAAGATA+GGG + Chr1:45658399-45658418 MsG0180002810.01.T01:intron 30.0%
CACACAATTGGAAAAAGATA+GGG - Chr1:45657518-45657537 None:intergenic 30.0%
CATTTAGTTAAACTGAGGAT+TGG + Chr1:45654319-45654338 MsG0180002810.01.T01:intron 30.0%
CCATGTAAATGGATGATAAA+GGG - Chr1:45655850-45655869 None:intergenic 30.0%
CCGGCAAAATTTATTCATAT+TGG - Chr1:45651741-45651760 None:intergenic 30.0%
CTCAAAAATGATATGCTTGA+AGG - Chr1:45651615-45651634 None:intergenic 30.0%
CTTTATGTATGATACTACTC+CGG - Chr1:45653884-45653903 None:intergenic 30.0%
GAAAGTCAAAACCCTAAAAA+TGG + Chr1:45650784-45650803 MsG0180002810.01.T01:CDS 30.0%
GAAATAAATAAATCGCTGTG+GGG - Chr1:45654136-45654155 None:intergenic 30.0%
GACTAAACTGAAATTGTCTT+TGG + Chr1:45657365-45657384 MsG0180002810.01.T01:intron 30.0%
GACTGTTCAATCTTTGTATT+TGG + Chr1:45656175-45656194 MsG0180002810.01.T01:intron 30.0%
GACTTCTTCCATTAAAAGAA+TGG - Chr1:45652363-45652382 None:intergenic 30.0%
GAGAGAAGAAAAAATTACTG+CGG - Chr1:45650899-45650918 None:intergenic 30.0%
GATGAAGAGATGAAGATTAA+TGG + Chr1:45653438-45653457 MsG0180002810.01.T01:intron 30.0%
GATGTAGGAAAAATTGTTCA+AGG + Chr1:45654244-45654263 MsG0180002810.01.T01:intron 30.0%
GATTCTTGTATTCAATCGTT+TGG + Chr1:45656454-45656473 MsG0180002810.01.T01:intron 30.0%
GCTAGAAGAATACTCTTAAA+TGG + Chr1:45652533-45652552 MsG0180002810.01.T01:intron 30.0%
GTCACTTACTAATTTATCCT+CGG + Chr1:45655764-45655783 MsG0180002810.01.T01:intron 30.0%
GTTCAAAATGAGGAAATAGA+AGG - Chr1:45656362-45656381 None:intergenic 30.0%
TAAATTTGCATATATGCCCA+AGG + Chr1:45651354-45651373 MsG0180002810.01.T01:intron 30.0%
TAAGCAAGATAAAACTCACA+GGG - Chr1:45652313-45652332 None:intergenic 30.0%
TATTATAATAAGGACCAGAG+GGG - Chr1:45656966-45656985 None:intergenic 30.0%
TATTTAATGTACTCCAAGCA+TGG - Chr1:45656270-45656289 None:intergenic 30.0%
TCACACAATTAGGAAAAGAT+AGG + Chr1:45658398-45658417 MsG0180002810.01.T01:intron 30.0%
TCACACAATTGGAAAAAGAT+AGG - Chr1:45657519-45657538 None:intergenic 30.0%
TCACTTACTAATTTATCCTC+GGG + Chr1:45655765-45655784 MsG0180002810.01.T01:intron 30.0%
TCATATGATCCACTGAATAA+TGG + Chr1:45654797-45654816 MsG0180002810.01.T01:intron 30.0%
TCCATGTAAATGGATGATAA+AGG - Chr1:45655851-45655870 None:intergenic 30.0%
TCTATAGTCAGAACATTACT+TGG - Chr1:45657411-45657430 None:intergenic 30.0%
TCTTTGTATTTGGATATCAC+AGG + Chr1:45656185-45656204 MsG0180002810.01.T01:intron 30.0%
TGAACAGTAGATCAAATAGA+AGG + Chr1:45652153-45652172 MsG0180002810.01.T01:intron 30.0%
TGCAATGTTAGTTGTGAAAA+TGG + Chr1:45655308-45655327 MsG0180002810.01.T01:intron 30.0%
TTAAGCAAGATAAAACTCAC+AGG - Chr1:45652314-45652333 None:intergenic 30.0%
TTCTTATTGTAGGGTAAATG+TGG - Chr1:45653013-45653032 None:intergenic 30.0%
TTTATCATCCATTTACATGG+AGG + Chr1:45655850-45655869 MsG0180002810.01.T01:CDS 30.0%
TTTGATGAATTTACGTGCAT+AGG + Chr1:45650960-45650979 MsG0180002810.01.T01:intron 30.0%
! AACCAAATTGACTCCAAATT+TGG - Chr1:45653205-45653224 None:intergenic 30.0%
! AAGTTTGTTCTATCCAACAA+AGG - Chr1:45655185-45655204 None:intergenic 30.0%
! AATTGTTCTAAACCTTGCAA+TGG + Chr1:45652869-45652888 MsG0180002810.01.T01:intron 30.0%
! AATTTCAAGTGTTCTGTTCT+TGG + Chr1:45655403-45655422 MsG0180002810.01.T01:intron 30.0%
! ACCAAATTGACTCCAAATTT+GGG - Chr1:45653204-45653223 None:intergenic 30.0%
! AGATCCAGTATTGAATCTTA+TGG - Chr1:45654060-45654079 None:intergenic 30.0%
! CTCCCTTTTTATGAAAAAAG+GGG + Chr1:45653690-45653709 MsG0180002810.01.T01:intron 30.0%
! GGAACCTGATAATTCTTTTA+AGG - Chr1:45654753-45654772 None:intergenic 30.0%
! TAAGGGTATGTTTACAAGTT+GGG + Chr1:45653266-45653285 MsG0180002810.01.T01:intron 30.0%
! TATCAGAAAAATAGTGGGAA+TGG + Chr1:45657050-45657069 MsG0180002810.01.T01:intron 30.0%
! TCAAAATATGGATTGCTGAT+TGG + Chr1:45654530-45654549 MsG0180002810.01.T01:CDS 30.0%
! TCTACGGCAATAACTATTTT+TGG + Chr1:45654293-45654312 MsG0180002810.01.T01:intron 30.0%
! TCTAGTACTTCTCAGTTTTA+GGG + Chr1:45652012-45652031 MsG0180002810.01.T01:intron 30.0%
! TTAAGGGTATGTTTACAAGT+TGG + Chr1:45653265-45653284 MsG0180002810.01.T01:intron 30.0%
! TTTTCACTTGTGAAATACAG+TGG + Chr1:45658449-45658468 MsG0180002810.01.T01:three_prime_UTR 30.0%
!! AATTGGCTTAAATGCACTTT+TGG - Chr1:45653717-45653736 None:intergenic 30.0%
!! ATCACATGTTCGAGTTTTAT+TGG + Chr1:45652788-45652807 MsG0180002810.01.T01:intron 30.0%
!! GTACAATTTTGCTTTTCGTA+TGG - Chr1:45655255-45655274 None:intergenic 30.0%
!! GTGTTTATTTTTCCATTGCA+AGG - Chr1:45652884-45652903 None:intergenic 30.0%
!! TGATGGATTTGATGAAATCA+TGG + Chr1:45655213-45655232 MsG0180002810.01.T01:intron 30.0%
!! TTTTAATTAAATACCCCCTC+TGG + Chr1:45656949-45656968 MsG0180002810.01.T01:intron 30.0%
!!! CATTTTTGAGTTTTGGTCTT+GGG + Chr1:45651625-45651644 MsG0180002810.01.T01:intron 30.0%
!!! GTCCCCTTTTTTCATAAAAA+GGG - Chr1:45653695-45653714 None:intergenic 30.0%
!!! GTTGGTTTTTAAAATAGAGG+GGG - Chr1:45653155-45653174 None:intergenic 30.0%
!!! TCATTTTTGAGTTTTGGTCT+TGG + Chr1:45651624-45651643 MsG0180002810.01.T01:intron 30.0%
!!! TGCACCCCATTATTTTAATT+GGG - Chr1:45658375-45658394 None:intergenic 30.0%
!!! TTGCACCCCATTATTTTAAT+TGG - Chr1:45658376-45658395 None:intergenic 30.0%
AATTCATGCATTTGTCCCTT+CGG + Chr1:45653110-45653129 MsG0180002810.01.T01:intron 35.0%
ACAATTAGGAAAAGATAGGG+GGG + Chr1:45658402-45658421 MsG0180002810.01.T01:intron 35.0%
ACAATTGGAAAAAGATAGGG+GGG - Chr1:45657515-45657534 None:intergenic 35.0%
ACACTTGTATTGAGTAGTGT+AGG - Chr1:45651308-45651327 None:intergenic 35.0%
ACAGTAAACTCGTTAAACCA+AGG - Chr1:45656303-45656322 None:intergenic 35.0%
ACCCTTAGTATACACTATCA+GGG + Chr1:45656801-45656820 MsG0180002810.01.T01:intron 35.0%
AGAGCTACTAAAAAGAGTCA+AGG + Chr1:45657266-45657285 MsG0180002810.01.T01:CDS 35.0%
AGCCAAATATCCTTCTAACA+AGG - Chr1:45652460-45652479 None:intergenic 35.0%
AGTAGTTTCCTAAACCATTC+TGG + Chr1:45656404-45656423 MsG0180002810.01.T01:intron 35.0%
AGTCCTTAAACAGTTTCATG+TGG + Chr1:45657986-45658005 MsG0180002810.01.T01:intron 35.0%
ATGTTCTGACTATAGACTTC+AGG + Chr1:45657415-45657434 MsG0180002810.01.T01:exon 35.0%
ATTACGGTGTGATAAGATGA+CGG - Chr1:45655703-45655722 None:intergenic 35.0%
ATTATAATAAGGACCAGAGG+GGG - Chr1:45656965-45656984 None:intergenic 35.0%
ATTCCAGATCCATTATTCAG+TGG - Chr1:45654809-45654828 None:intergenic 35.0%
ATTTGGCTACACCTGTAAAT+TGG - Chr1:45654853-45654872 None:intergenic 35.0%
CACAATTAGGAAAAGATAGG+GGG + Chr1:45658401-45658420 MsG0180002810.01.T01:intron 35.0%
CACAATTGGAAAAAGATAGG+GGG - Chr1:45657516-45657535 None:intergenic 35.0%
CACTTGGCATGAATTAATTG+CGG + Chr1:45658261-45658280 MsG0180002810.01.T01:intron 35.0%
CACTTGGCATGAATTAATTG+CGG - Chr1:45658280-45658261 None:intergenic 35.0%
CAGAAAAGTCTAACATGTTG+AGG + Chr1:45651419-45651438 MsG0180002810.01.T01:intron 35.0%
CATACAGTTAACACATCCAA+AGG - Chr1:45655363-45655382 None:intergenic 35.0%
CCAAAAAATGGTAAACTTGC+AGG - Chr1:45651548-45651567 None:intergenic 35.0%
CCAAATATCCTTCTAACAAG+GGG - Chr1:45652458-45652477 None:intergenic 35.0%
CCCTTTATCATCCATTTACA+TGG + Chr1:45655847-45655866 MsG0180002810.01.T01:CDS 35.0%
CGATATTACTCGCTTCATTT+GGG + Chr1:45657868-45657887 MsG0180002810.01.T01:intron 35.0%
CGGAGTAGTATCATACATAA+AGG + Chr1:45653882-45653901 MsG0180002810.01.T01:intron 35.0%
GAAAGGAAATCTGGAGATTA+CGG - Chr1:45655719-45655738 None:intergenic 35.0%
GAATAATTCAGAGCTCTTAG+AGG - Chr1:45652428-45652447 None:intergenic 35.0%
GCCAAATATCCTTCTAACAA+GGG - Chr1:45652459-45652478 None:intergenic 35.0%
GGAACATGAAGTTCAAAATG+AGG - Chr1:45656372-45656391 None:intergenic 35.0%
GGGGAAGAAGATAGAAATTA+GGG - Chr1:45657760-45657779 None:intergenic 35.0%
GGTGACATTTAGTTAAACTG+AGG + Chr1:45654314-45654333 MsG0180002810.01.T01:intron 35.0%
GTGGCAATGTCTGAATTTAA+GGG + Chr1:45653249-45653268 MsG0180002810.01.T01:intron 35.0%
GTTAACTGAAAGACGACTAA+GGG + Chr1:45656864-45656883 MsG0180002810.01.T01:intron 35.0%
TAAAACTCGAACATGTGATG+TGG - Chr1:45652787-45652806 None:intergenic 35.0%
TAAGCTGAAAACAGGTAATG+AGG - Chr1:45651144-45651163 None:intergenic 35.0%
TAATCCTCAAACATTTGCCT+AGG + Chr1:45652209-45652228 MsG0180002810.01.T01:intron 35.0%
TACAGGTGTAGCCAAATTAT+GGG + Chr1:45654856-45654875 MsG0180002810.01.T01:intron 35.0%
TAGTCGATCAAATAGAAGAG+TGG - Chr1:45652667-45652686 None:intergenic 35.0%
TATCAGTAGCGTTTACATCT+TGG + Chr1:45657928-45657947 MsG0180002810.01.T01:intron 35.0%
TATTGTTGTGGTGAAGAGTA+GGG - Chr1:45653091-45653110 None:intergenic 35.0%
TCAAAACCATCGTAACAAAC+AGG - Chr1:45651085-45651104 None:intergenic 35.0%
TCCAAATTTCGATCAAGTAG+CGG - Chr1:45654612-45654631 None:intergenic 35.0%
TCGATATTACTCGCTTCATT+TGG + Chr1:45657867-45657886 MsG0180002810.01.T01:intron 35.0%
TCTCCACATGAAACTGTTTA+AGG - Chr1:45657992-45658011 None:intergenic 35.0%
TGGATAGAATATTTGAGCAG+CGG - Chr1:45654905-45654924 None:intergenic 35.0%
TGGGGAAGAAGATAGAAATT+AGG - Chr1:45657761-45657780 None:intergenic 35.0%
TGTGGCTATTTATTCCTTTC+TGG + Chr1:45656080-45656099 MsG0180002810.01.T01:intron 35.0%
TTAAACAGTTTCATGTGGAG+AGG + Chr1:45657991-45658010 MsG0180002810.01.T01:intron 35.0%
TTACAGGTGTAGCCAAATTA+TGG + Chr1:45654855-45654874 MsG0180002810.01.T01:intron 35.0%
TTATGTGGTATGCATCTTTG+GGG + Chr1:45658510-45658529 MsG0180002810.01.T01:three_prime_UTR 35.0%
TTATTGTTGTGGTGAAGAGT+AGG - Chr1:45653092-45653111 None:intergenic 35.0%
TTCATGCTTTCATTCTACGT+AGG + Chr1:45656487-45656506 MsG0180002810.01.T01:intron 35.0%
TTGGTTTAACGAGTTTACTG+TGG + Chr1:45656302-45656321 MsG0180002810.01.T01:CDS 35.0%
TTGTTCAAGGTGAGATTCTA+TGG + Chr1:45654257-45654276 MsG0180002810.01.T01:intron 35.0%
! AAAAGTGCATTTAAGACCGA+AGG - Chr1:45653129-45653148 None:intergenic 35.0%
! AAAGTGCATTTAAGACCGAA+GGG - Chr1:45653128-45653147 None:intergenic 35.0%
! AAATTGACTCCAAATTTGGG+TGG - Chr1:45653201-45653220 None:intergenic 35.0%
! AACCAAATTGACTCCACATT+GGG + Chr1:45653594-45653613 MsG0180002810.01.T01:intron 35.0%
! AAGGGTATGTTTACAAGTTG+GGG + Chr1:45653267-45653286 MsG0180002810.01.T01:intron 35.0%
! AATTGACTCCAAATTTGGGT+GGG - Chr1:45653200-45653219 None:intergenic 35.0%
! ACCCAAATTTGGAGTCAATT+TGG + Chr1:45653200-45653219 MsG0180002810.01.T01:intron 35.0%
! ATTCTAGAGGTAATGTTTCC+TGG + Chr1:45656606-45656625 MsG0180002810.01.T01:intron 35.0%
! CTCAACATGTTAGACTTTTC+TGG - Chr1:45651421-45651440 None:intergenic 35.0%
! GACATACAACGTTTTGCTTT+TGG - Chr1:45651786-45651805 None:intergenic 35.0%
! GAGGAAAAGTTGAGTTTTTG+TGG + Chr1:45654656-45654675 MsG0180002810.01.T01:CDS 35.0%
! GTCTAGTACTTCTCAGTTTT+AGG + Chr1:45652011-45652030 MsG0180002810.01.T01:intron 35.0%
! GTGATCTGCCATTCTTTTAA+TGG + Chr1:45652352-45652371 MsG0180002810.01.T01:intron 35.0%
! TAGAGATTTTCATGGAAGGT+GGG + Chr1:45656909-45656928 MsG0180002810.01.T01:intron 35.0%
! TGATTTTCAGACATGTTACC+TGG + Chr1:45655788-45655807 MsG0180002810.01.T01:intron 35.0%
! TTCGGTCTTAAATGCACTTT+TGG + Chr1:45653128-45653147 MsG0180002810.01.T01:intron 35.0%
!! AGATCAAATAGAAGGTGTTC+TGG + Chr1:45652161-45652180 MsG0180002810.01.T01:intron 35.0%
!! CTGGAATGTTGTTTCATGTT+TGG + Chr1:45654822-45654841 MsG0180002810.01.T01:intron 35.0%
!! TGAAATTGTCTTTGGTTTGC+AGG + Chr1:45657373-45657392 MsG0180002810.01.T01:intron 35.0%
!! TTGTGCTGTTTATTATGTCC+TGG + Chr1:45655518-45655537 MsG0180002810.01.T01:intron 35.0%
!!! AAGCAATTTTCAAGTGGCAT+TGG + Chr1:45657160-45657179 MsG0180002810.01.T01:intron 35.0%
!!! CAGCAATCCATATTTTGACT+AGG - Chr1:45654528-45654547 None:intergenic 35.0%
!!! CCTGCAAGTTTACCATTTTT+TGG + Chr1:45651545-45651564 MsG0180002810.01.T01:intron 35.0%
!!! GGTCCCCTTTTTTCATAAAA+AGG - Chr1:45653696-45653715 None:intergenic 35.0%
!!! GTTTGGCTTTTCCAATTTAC+AGG + Chr1:45654839-45654858 MsG0180002810.01.T01:intron 35.0%
!!! TGCACCCCATTGTTTTAATT+GGG + Chr1:45657542-45657561 MsG0180002810.01.T01:intron 35.0%
!!! TGCTGACATTTTTTTCCTCA+AGG + Chr1:45654936-45654955 MsG0180002810.01.T01:CDS 35.0%
!!! TGCTTCTTCTGCCATTTTTA+GGG - Chr1:45650798-45650817 None:intergenic 35.0%
!!! TTGCACCCCATTGTTTTAAT+TGG + Chr1:45657541-45657560 MsG0180002810.01.T01:intron 35.0%
!!! TTTTTGAAGTGTTGCCTTAC+AGG - Chr1:45657231-45657250 None:intergenic 35.0%
AAAACTGGGGACCAAAATGT+TGG + Chr1:45653644-45653663 MsG0180002810.01.T01:intron 40.0%
AAAGAGTGAACTTCACCTTG+AGG - Chr1:45654954-45654973 None:intergenic 40.0%
AAATACTTAAATGCCCCCAG+CGG - Chr1:45657105-45657124 None:intergenic 40.0%
ACCAAAAAGGGAGAAAAGGA+TGG + Chr1:45658337-45658356 MsG0180002810.01.T01:intron 40.0%
ACCAAAAAGGGGGAAAATGA+TGG - Chr1:45657580-45657599 None:intergenic 40.0%
ACTTTCTCATCAGGCATTAC+TGG - Chr1:45658139-45658158 None:intergenic 40.0%
AGAAAAAATTACTGCGGTGC+TGG - Chr1:45650893-45650912 None:intergenic 40.0%
AGACATTGCCACGTCATAAA+TGG - Chr1:45653241-45653260 None:intergenic 40.0%
AGTTACAACCCAAACACTAG+CGG + Chr1:45652632-45652651 MsG0180002810.01.T01:intron 40.0%
ATCACTTTGACACAGAATGG+TGG - Chr1:45652337-45652356 None:intergenic 40.0%
ATCATCACCAAAACACCCAA+AGG - Chr1:45658325-45658306 None:intergenic 40.0%
ATCATCACCAAAACACCCAA+GGG + Chr1:45658306-45658325 MsG0180002810.01.T01:intron 40.0%
ATCGAAATTTGGAAAGCCGT+TGG + Chr1:45654619-45654638 MsG0180002810.01.T01:CDS 40.0%
ATGACATGGCAACACCTAAA+TGG - Chr1:45653555-45653574 None:intergenic 40.0%
ATGTTACCTGGTCTACAACA+AGG + Chr1:45655800-45655819 MsG0180002810.01.T01:CDS 40.0%
CAAAAAGGGAGAAAAGGATG+GGG + Chr1:45658339-45658358 MsG0180002810.01.T01:intron 40.0%
CAAAAAGGGGGAAAATGATG+GGG - Chr1:45657578-45657597 None:intergenic 40.0%
CAAAACGTTGTATGTCTGCA+GGG + Chr1:45651790-45651809 MsG0180002810.01.T01:intron 40.0%
CAAAACTGGGACCAAAATGT+TGG - Chr1:45653173-45653192 None:intergenic 40.0%
CACACATCTGATGTCAAGTA+TGG - Chr1:45654188-45654207 None:intergenic 40.0%
CAGATCACTTTGACACAGAA+TGG - Chr1:45652340-45652359 None:intergenic 40.0%
CATCCATCACAAGCCTAATA+AGG - Chr1:45655070-45655089 None:intergenic 40.0%
CATTTACATGGAGGATGAAG+AGG + Chr1:45655859-45655878 MsG0180002810.01.T01:CDS 40.0%
CCAAAAAGGGAGAAAAGGAT+GGG + Chr1:45658338-45658357 MsG0180002810.01.T01:intron 40.0%
CCAAAAAGGGGGAAAATGAT+GGG - Chr1:45657579-45657598 None:intergenic 40.0%
CCAAACCAAAAAGGGAGAAA+AGG + Chr1:45658333-45658352 MsG0180002810.01.T01:intron 40.0%
CCCCTTGTTAGAAGGATATT+TGG + Chr1:45652455-45652474 MsG0180002810.01.T01:intron 40.0%
CCCTTAGTATACACTATCAG+GGG + Chr1:45656802-45656821 MsG0180002810.01.T01:intron 40.0%
CGTGGCAATGTCTGAATTTA+AGG + Chr1:45653248-45653267 MsG0180002810.01.T01:intron 40.0%
CTCTTCATCCTCCATGTAAA+TGG - Chr1:45655861-45655880 None:intergenic 40.0%
CTGGTTGCCTAGTCAAAATA+TGG + Chr1:45654518-45654537 MsG0180002810.01.T01:CDS 40.0%
GAAGAGGTAAGCTGCTAAAA+GGG + Chr1:45655875-45655894 MsG0180002810.01.T01:intron 40.0%
GACCCTTAGTATACACTATC+AGG + Chr1:45656800-45656819 MsG0180002810.01.T01:intron 40.0%
GATGTAAACGCTACTGATAC+AGG - Chr1:45657927-45657946 None:intergenic 40.0%
GGAGTCACTTGATCTCAAAA+AGG - Chr1:45658188-45658207 None:intergenic 40.0%
GGGTGCAAAATCACACAATT+AGG + Chr1:45658388-45658407 MsG0180002810.01.T01:intron 40.0%
GGTTAACTGAAAGACGACTA+AGG + Chr1:45656863-45656882 MsG0180002810.01.T01:intron 40.0%
GTTTCCTAAACCATTCTGGT+TGG + Chr1:45656408-45656427 MsG0180002810.01.T01:intron 40.0%
TAACTCTCCGCTTTCATAGT+CGG - Chr1:45656541-45656560 None:intergenic 40.0%
TATGAGTGAGTCGAAGGAAT+GGG - Chr1:45657780-45657799 None:intergenic 40.0%
TCAGTGCAAACTTTCTCATC+AGG - Chr1:45658148-45658167 None:intergenic 40.0%
TCATCACCAAAACACCCAAA+GGG - Chr1:45657611-45657630 None:intergenic 40.0%
TCCAATATACGCTAGCTGAA+AGG - Chr1:45655736-45655755 None:intergenic 40.0%
TCCTTTCAGCTAGCGTATAT+TGG + Chr1:45655732-45655751 MsG0180002810.01.T01:intron 40.0%
TCGAAATTTGGAAAGCCGTT+GGG + Chr1:45654620-45654639 MsG0180002810.01.T01:CDS 40.0%
TCTCCTTATTAGGCTTGTGA+TGG + Chr1:45655064-45655083 MsG0180002810.01.T01:intron 40.0%
TGAAGAGGTAAGCTGCTAAA+AGG + Chr1:45655874-45655893 MsG0180002810.01.T01:intron 40.0%
TGAGCTATATCCAACACAAG+AGG - Chr1:45654721-45654740 None:intergenic 40.0%
TGATAGATGTTCACAGCCTT+TGG + Chr1:45655344-45655363 MsG0180002810.01.T01:intron 40.0%
TGATGTTATGCCACATACTG+TGG - Chr1:45651981-45652000 None:intergenic 40.0%
TGCGGACATGTCATCAAAAA+CGG - Chr1:45658298-45658279 None:intergenic 40.0%
TGCTGGATTTGGATTTGGAT+TGG - Chr1:45650876-45650895 None:intergenic 40.0%
TGGGTTGTAACTGATCTCAT+AGG - Chr1:45652624-45652643 None:intergenic 40.0%
TGTTACCTGGTCTACAACAA+GGG + Chr1:45655801-45655820 MsG0180002810.01.T01:CDS 40.0%
TTACGGTGTGATAAGATGAC+GGG - Chr1:45655702-45655721 None:intergenic 40.0%
TTCAATGACTTCGACAAAGC+CGG - Chr1:45656582-45656601 None:intergenic 40.0%
TTCTCTGATCCATTCCCAAT+TGG - Chr1:45655626-45655645 None:intergenic 40.0%
TTGGAAATATGCAGCCTGTA+AGG + Chr1:45657214-45657233 MsG0180002810.01.T01:intron 40.0%
TTTCCTTCCACAATCTTTGG+CGG - Chr1:45656246-45656265 None:intergenic 40.0%
! ACCAAATTGACTCCACATTG+GGG + Chr1:45653595-45653614 MsG0180002810.01.T01:intron 40.0%
! ACTGAATTGCTTGATTCGCT+TGG - Chr1:45657969-45657988 None:intergenic 40.0%
! ACTGAGGGTAGAGATTTTCA+TGG + Chr1:45656901-45656920 MsG0180002810.01.T01:intron 40.0%
! AGAGATTTTCATGGAAGGTG+GGG + Chr1:45656910-45656929 MsG0180002810.01.T01:intron 40.0%
! AGGGTAGAGATTTTCATGGA+AGG + Chr1:45656905-45656924 MsG0180002810.01.T01:intron 40.0%
! ATTGACTCCAAATTTGGGTG+GGG - Chr1:45653199-45653218 None:intergenic 40.0%
! CAACCAAATTGACTCCACAT+TGG + Chr1:45653593-45653612 MsG0180002810.01.T01:intron 40.0%
! CCCCTGATAGTGTATACTAA+GGG - Chr1:45656805-45656824 None:intergenic 40.0%
! GCACTGATGAGAAAGTTGAA+TGG + Chr1:45658107-45658126 MsG0180002810.01.T01:intron 40.0%
! GTAGAGATTTTCATGGAAGG+TGG + Chr1:45656908-45656927 MsG0180002810.01.T01:intron 40.0%
! TCCCCTGATAGTGTATACTA+AGG - Chr1:45656806-45656825 None:intergenic 40.0%
! TGGAGTCAATTTGGTTGATG+TGG + Chr1:45653209-45653228 MsG0180002810.01.T01:intron 40.0%
! TGGAGTCAATTTGGTTGATG+TGG - Chr1:45653228-45653209 None:intergenic 40.0%
! TTGATTGCCGACTATGAAAG+CGG + Chr1:45656531-45656550 MsG0180002810.01.T01:CDS 40.0%
! TTTGAGATCGTGAGAAGCAT+CGG + Chr1:45651004-45651023 MsG0180002810.01.T01:CDS 40.0%
!! AGTTGTTGAAGGTGTTGTAC+TGG + Chr1:45654406-45654425 MsG0180002810.01.T01:intron 40.0%
!! CAACATTTTGGTCCCAGTTT+TGG + Chr1:45653171-45653190 MsG0180002810.01.T01:intron 40.0%
!! GATCCACTGAATAATGGATC+TGG + Chr1:45654803-45654822 MsG0180002810.01.T01:intron 40.0%
!! GTTGGTTTGGTTCAAACTGA+GGG + Chr1:45656886-45656905 MsG0180002810.01.T01:intron 40.0%
!! TGTCAAGTATGGCTTGTTTC+AGG - Chr1:45654177-45654196 None:intergenic 40.0%
!! TTTCAGGCTTTCAGGTTTCT+GGG - Chr1:45654161-45654180 None:intergenic 40.0%
!!! CATTTTCCCCCTTTTTGGTT+TGG + Chr1:45657581-45657600 MsG0180002810.01.T01:intron 40.0%
!!! CCTTTTCTCCCTTTTTGGTT+TGG - Chr1:45658336-45658355 None:intergenic 40.0%
!!! CTGCTTCTTCTGCCATTTTT+AGG - Chr1:45650799-45650818 None:intergenic 40.0%
!!! TACGATGGTTTTGAACCTTC+TGG + Chr1:45651091-45651110 MsG0180002810.01.T01:CDS 40.0%
!!! TATTTTGACTAGGCAACCAG+CGG - Chr1:45654518-45654537 None:intergenic 40.0%
!!! TTTCTCCCTTTTTGGTTTGG+AGG - Chr1:45658333-45658352 None:intergenic 40.0%
AAACTCACAGGGTGATTGCT+CGG - Chr1:45652302-45652321 None:intergenic 45.0%
AAATAGAAGAGTGGCTGCAG+AGG - Chr1:45652658-45652677 None:intergenic 45.0%
AATTTGGAAAGCCGTTGGGA+TGG + Chr1:45654624-45654643 MsG0180002810.01.T01:CDS 45.0%
ACATCCAGCTGACCTTAAAC+CGG + Chr1:45656560-45656579 MsG0180002810.01.T01:CDS 45.0%
ACATGTCTGAAAATCACCCG+AGG - Chr1:45655784-45655803 None:intergenic 45.0%
ACGCTAGCTGAAAGGAAATC+TGG - Chr1:45655728-45655747 None:intergenic 45.0%
ACTGAAAGACGACTAAGGGT+TGG + Chr1:45656868-45656887 MsG0180002810.01.T01:intron 45.0%
AGTTATAAGTTAGCGCCGCT+GGG + Chr1:45657087-45657106 MsG0180002810.01.T01:intron 45.0%
ATATTGCCCGCCAAAGATTG+TGG + Chr1:45656236-45656255 MsG0180002810.01.T01:CDS 45.0%
ATGAGTGAGTCGAAGGAATG+GGG - Chr1:45657779-45657798 None:intergenic 45.0%
CATCACCAAAACACCCAAAG+GGG - Chr1:45657610-45657629 None:intergenic 45.0%
CATCATCACCAAAACACCCA+AGG + Chr1:45658305-45658324 MsG0180002810.01.T01:intron 45.0%
CATTCCCAATTGGCAGATGT+CGG - Chr1:45655616-45655635 None:intergenic 45.0%
CCTTCTAACAAGGGGATGAT+GGG - Chr1:45652450-45652469 None:intergenic 45.0%
GAAGCCAACCAGAATGGTTT+AGG - Chr1:45656415-45656434 None:intergenic 45.0%
GAGATTTCGCAAAGCACACA+TGG + Chr1:45652695-45652714 MsG0180002810.01.T01:intron 45.0%
GCAAAACGTTGTATGTCTGC+AGG + Chr1:45651789-45651808 MsG0180002810.01.T01:intron 45.0%
GCAACCTAGGCAAATGTTTG+AGG - Chr1:45652216-45652235 None:intergenic 45.0%
GCAGCTTGAACAGAAGTTTG+AGG + Chr1:45652588-45652607 MsG0180002810.01.T01:intron 45.0%
GCCGCTACTTGATCGAAATT+TGG + Chr1:45654608-45654627 MsG0180002810.01.T01:CDS 45.0%
GGGGTGCAAAATCACACAAT+TGG - Chr1:45658406-45658387 None:intergenic 45.0%
GGGTTTCCTTCCACAATCTT+TGG - Chr1:45656249-45656268 None:intergenic 45.0%
GGTAGATGATGATTCAGCGA+CGG - Chr1:45650855-45650874 None:intergenic 45.0%
GGTGTAGCCAAATTATGGGA+CGG + Chr1:45654860-45654879 MsG0180002810.01.T01:intron 45.0%
GTATGAGTGAGTCGAAGGAA+TGG - Chr1:45657781-45657800 None:intergenic 45.0%
GTGGAGCGTAATGCAGATAA+TGG + Chr1:45656321-45656340 MsG0180002810.01.T01:CDS 45.0%
GTTCACTCCGTCCCATAATT+TGG - Chr1:45654870-45654889 None:intergenic 45.0%
GTTGAGACGCCACAATTAGT+TGG - Chr1:45653040-45653059 None:intergenic 45.0%
TAGTTATAAGTTAGCGCCGC+TGG + Chr1:45657086-45657105 MsG0180002810.01.T01:intron 45.0%
TCATCACCAAAACACCCAAG+GGG + Chr1:45658307-45658326 MsG0180002810.01.T01:intron 45.0%
TCCTTCTAACAAGGGGATGA+TGG - Chr1:45652451-45652470 None:intergenic 45.0%
TGACAACTACAGATGAAGCC+AGG - Chr1:45655539-45655558 None:intergenic 45.0%
TTATCCAATCAGGCCCATAG+TGG + Chr1:45651247-45651266 MsG0180002810.01.T01:intron 45.0%
TTCCTTCCACAATCTTTGGC+GGG - Chr1:45656245-45656264 None:intergenic 45.0%
TTGACTCCAAATTTGGGTGG+GGG - Chr1:45653198-45653217 None:intergenic 45.0%
TTTGGTGAATGCGCTTGAAG+AGG + Chr1:45652076-45652095 MsG0180002810.01.T01:intron 45.0%
! AAATTGACTCCACATTGGGG+CGG + Chr1:45653598-45653617 MsG0180002810.01.T01:intron 45.0%
! AATTACTGCGGTGCTGGATT+TGG - Chr1:45650887-45650906 None:intergenic 45.0%
! ACTTCGACAAAGCCGGTTTA+AGG - Chr1:45656575-45656594 None:intergenic 45.0%
! AGGTGTTGCCATGTCATTAG+TGG + Chr1:45653558-45653577 MsG0180002810.01.T01:intron 45.0%
! CAATGATTCCAGTGCTACTG+CGG - Chr1:45650831-45650850 None:intergenic 45.0%
! CCCATCATTTTCCCCCTTTT+TGG + Chr1:45657576-45657595 MsG0180002810.01.T01:intron 45.0%
! CCCATCCTTTTCTCCCTTTT+TGG - Chr1:45658341-45658360 None:intergenic 45.0%
! GAGCGTAATGCAGATAATGG+TGG + Chr1:45656324-45656343 MsG0180002810.01.T01:CDS 45.0%
! GGTGTTGCCATGTCATTAGT+GGG + Chr1:45653559-45653578 MsG0180002810.01.T01:intron 45.0%
! TTTTCCACTATGGGCCTGAT+TGG - Chr1:45651254-45651273 None:intergenic 45.0%
!! AAGACGACTAAGGGTTGGTT+TGG + Chr1:45656873-45656892 MsG0180002810.01.T01:intron 45.0%
!! ATGGCTTGTTTCAGGCTTTC+AGG - Chr1:45654169-45654188 None:intergenic 45.0%
!! CTTTGGTTTGCAGGCTTACA+GGG + Chr1:45657382-45657401 MsG0180002810.01.T01:intron 45.0%
!! GGCATTGACCATTTATGACG+TGG + Chr1:45653230-45653249 MsG0180002810.01.T01:intron 45.0%
!! GGTTGGTTTGGTTCAAACTG+AGG + Chr1:45656885-45656904 MsG0180002810.01.T01:intron 45.0%
!! GTTTCAGGCTTTCAGGTTTC+TGG - Chr1:45654162-45654181 None:intergenic 45.0%
!! TCAAGAGTGTCCACAGTATG+TGG + Chr1:45651968-45651987 MsG0180002810.01.T01:intron 45.0%
!! TCTTTGGTTTGCAGGCTTAC+AGG + Chr1:45657381-45657400 MsG0180002810.01.T01:intron 45.0%
!!! TGGGTGTTTTGGTGATGATG+TGG + Chr1:45657613-45657632 MsG0180002810.01.T01:intron 45.0%
!!! TGGGTGTTTTGGTGATGATG+TGG - Chr1:45657632-45657613 None:intergenic 45.0%
!!! TTTCCCCCTTTTTGGTTTGG+AGG + Chr1:45657584-45657603 MsG0180002810.01.T01:intron 45.0%
AAGGGGCCTCCAAACCAAAA+AGG + Chr1:45658324-45658343 MsG0180002810.01.T01:intron 50.0%
AAGGGGCCTCCAAACCAAAA+AGG - Chr1:45658343-45658324 None:intergenic 50.0%
AGGGGCCTCCAAACCAAAAA+GGG + Chr1:45658325-45658344 MsG0180002810.01.T01:intron 50.0%
AGGGGCCTCCAAACCAAAAA+GGG - Chr1:45658344-45658325 None:intergenic 50.0%
ATAGGCCGACATCTGCCAAT+TGG + Chr1:45655608-45655627 MsG0180002810.01.T01:intron 50.0%
ATGGAAGGTGGGGTAAGAGA+GGG + Chr1:45656920-45656939 MsG0180002810.01.T01:intron 50.0%
ATGTCAGCACACTGCATGCA+TGG - Chr1:45654925-45654944 None:intergenic 50.0%
ATTGAAATTCCGACCGACGC+TGG + Chr1:45650746-45650765 MsG0180002810.01.T01:CDS 50.0%
CAGACTGAAGCCAACCAGAA+TGG - Chr1:45656421-45656440 None:intergenic 50.0%
CCATCGTAACAAACAGGCTG+AGG - Chr1:45651079-45651098 None:intergenic 50.0%
CCCATCATCCCCTTGTTAGA+AGG + Chr1:45652447-45652466 MsG0180002810.01.T01:intron 50.0%
CCTGCGCAAAATTCTGTTGC+AGG + Chr1:45654090-45654109 MsG0180002810.01.T01:intron 50.0%
CGACATCTGCCAATTGGGAA+TGG + Chr1:45655614-45655633 MsG0180002810.01.T01:intron 50.0%
CGTGCATAGGTTGTTGAGTG+CGG + Chr1:45650973-45650992 MsG0180002810.01.T01:intron 50.0%
GCAATGTGCATTCGTCCAGA+AGG - Chr1:45651109-45651128 None:intergenic 50.0%
GCCCCAATGTGGAGTCAATT+TGG - Chr1:45653599-45653618 None:intergenic 50.0%
GGCATTGCCCACTAATGACA+TGG - Chr1:45653569-45653588 None:intergenic 50.0%
GTGAACAAGCTAACATCCGC+TGG + Chr1:45654499-45654518 MsG0180002810.01.T01:CDS 50.0%
GTTATAAGTTAGCGCCGCTG+GGG + Chr1:45657088-45657107 MsG0180002810.01.T01:intron 50.0%
TACTATCGCAATGCCAGCGT+CGG - Chr1:45650762-45650781 None:intergenic 50.0%
TAGGCCGACATCTGCCAATT+GGG + Chr1:45655609-45655628 MsG0180002810.01.T01:intron 50.0%
TCCTTCCAGATCCATCCCAA+CGG - Chr1:45654638-45654657 None:intergenic 50.0%
TGGACGAATGCACATTGCTC+AGG + Chr1:45651111-45651130 MsG0180002810.01.T01:CDS 50.0%
TGTGGAAGGAAACCCATGCT+TGG + Chr1:45656254-45656273 MsG0180002810.01.T01:CDS 50.0%
TTATAAGTTAGCGCCGCTGG+GGG + Chr1:45657089-45657108 MsG0180002810.01.T01:intron 50.0%
TTTGGTCCCCCACCCAAATT+TGG + Chr1:45653189-45653208 MsG0180002810.01.T01:intron 50.0%
! AAAGCCGGTTTAAGGTCAGC+TGG - Chr1:45656567-45656586 None:intergenic 50.0%
! AATTGACTCCACATTGGGGC+GGG + Chr1:45653599-45653618 MsG0180002810.01.T01:intron 50.0%
! AGGGAGTATGAGTGAGTCGA+AGG - Chr1:45657786-45657805 None:intergenic 50.0%
! CCTCAGCCTGTTTGTTACGA+TGG + Chr1:45651076-45651095 MsG0180002810.01.T01:CDS 50.0%
! CCTGCAACAGAATTTTGCGC+AGG - Chr1:45654093-45654112 None:intergenic 50.0%
! TCTTGCCCTTGTTGTAGACC+AGG - Chr1:45655809-45655828 None:intergenic 50.0%
! TGCGGTGCTGGATTTGGATT+TGG - Chr1:45650881-45650900 None:intergenic 50.0%
!! TTCATGTGGAGAGGCGTCAT+CGG + Chr1:45658000-45658019 MsG0180002810.01.T01:intron 50.0%
!! TTTGGTTTGGAGGCCCCTTT+GGG + Chr1:45657594-45657613 MsG0180002810.01.T01:intron 50.0%
!!! TTTTGGTTTGGAGGCCCCTT+GGG - Chr1:45657612-45657593 None:intergenic 50.0%
!!! TTTTGGTTTGGAGGCCCCTT+TGG + Chr1:45657593-45657612 MsG0180002810.01.T01:intron 50.0%
!!! TTTTTGGTTTGGAGGCCCCT+TGG - Chr1:45657611-45657592 None:intergenic 50.0%
CACTATCAGGGGAGAGCTAG+AGG + Chr1:45656813-45656832 MsG0180002810.01.T01:intron 55.0%
CATGGAAGGTGGGGTAAGAG+AGG + Chr1:45656919-45656938 MsG0180002810.01.T01:intron 55.0%
GAAAGCCGTTGGGATGGATC+TGG + Chr1:45654630-45654649 MsG0180002810.01.T01:CDS 55.0%
GGGCCTCCAAACCAAAAAGG+GGG - Chr1:45658346-45658327 None:intergenic 55.0%
GGGGCCTCCAAACCAAAAAG+GGG - Chr1:45658345-45658326 None:intergenic 55.0%
GTTGGGATGGATCTGGAAGG+AGG + Chr1:45654637-45654656 MsG0180002810.01.T01:CDS 55.0%
TCTTGCTCGAACACGTGGTG+CGG + Chr1:45652051-45652070 MsG0180002810.01.T01:intron 55.0%
TGAGCTCTTGCTCGAACACG+TGG + Chr1:45652046-45652065 MsG0180002810.01.T01:intron 55.0%
TGCAGAGGCCGCTAGTGTTT+GGG - Chr1:45652643-45652662 None:intergenic 55.0%
TGCCCGCCAAAGATTGTGGA+AGG + Chr1:45656240-45656259 MsG0180002810.01.T01:CDS 55.0%
TGGAAGGTGGGGTAAGAGAG+GGG + Chr1:45656921-45656940 MsG0180002810.01.T01:intron 55.0%
TTGGGTGGGGGACCAAAACT+GGG - Chr1:45653186-45653205 None:intergenic 55.0%
TTTGGGTGGGGGACCAAAAC+TGG - Chr1:45653187-45653206 None:intergenic 55.0%
! ATTGACTCCACATTGGGGCG+GGG + Chr1:45653600-45653619 MsG0180002810.01.T01:intron 55.0%
! CGAACACGTGGTGCGGTTTT+TGG + Chr1:45652058-45652077 MsG0180002810.01.T01:intron 55.0%
! TGATTCCAGTGCTACTGCGG+CGG - Chr1:45650828-45650847 None:intergenic 55.0%
!! CAGGCTGAGGCTTTTTAGCG+AGG - Chr1:45651066-45651085 None:intergenic 55.0%
!! GCTGAGGCTTTTTAGCGAGG+AGG - Chr1:45651063-45651082 None:intergenic 55.0%
AAGGTGGGGTAAGAGAGGGG+AGG + Chr1:45656924-45656943 MsG0180002810.01.T01:intron 60.0%
CTGCAGAGGCCGCTAGTGTT+TGG - Chr1:45652644-45652663 None:intergenic 60.0%
GCCGTTGGGATGGATCTGGA+AGG + Chr1:45654634-45654653 MsG0180002810.01.T01:CDS 60.0%
TTGACTCCACATTGGGGCGG+GGG + Chr1:45653601-45653620 MsG0180002810.01.T01:intron 60.0%
! GGAGGCCCCTTTGGGTGTTT+TGG + Chr1:45657602-45657621 MsG0180002810.01.T01:intron 60.0%
! TGGAGGCCCCTTGGGTGTTT+TGG - Chr1:45658316-45658335 None:intergenic 60.0%
!! ATCGCAATGCCAGCGTCGGT+CGG - Chr1:45650758-45650777 None:intergenic 60.0%
TTTGGTCCCCCGCCCCAATG+TGG - Chr1:45653610-45653629 None:intergenic 65.0%
! TTCCAGTGCTACTGCGGCGG+CGG - Chr1:45650825-45650844 None:intergenic 65.0%
AGCCGCCGCCGCAGTAGCAC+TGG + Chr1:45650820-45650839 MsG0180002810.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 45650710 45658604 45650710 ID=MsG0180002810.01;Name=MsG0180002810.01
Chr1 mRNA 45650710 45658604 45650710 ID=MsG0180002810.01.T01;Parent=MsG0180002810.01;Name=MsG0180002810.01.T01;_AED=0.41;_eAED=0.44;_QI=0|0.88|0.8|1|0.77|0.8|10|233|399
Chr1 exon 45650710 45650900 45650710 ID=MsG0180002810.01.T01:exon:38702;Parent=MsG0180002810.01.T01
Chr1 exon 45650982 45651132 45650982 ID=MsG0180002810.01.T01:exon:38703;Parent=MsG0180002810.01.T01
Chr1 exon 45654478 45654767 45654478 ID=MsG0180002810.01.T01:exon:38704;Parent=MsG0180002810.01.T01
Chr1 exon 45654861 45655012 45654861 ID=MsG0180002810.01.T01:exon:38705;Parent=MsG0180002810.01.T01
Chr1 exon 45655798 45655880 45655798 ID=MsG0180002810.01.T01:exon:38706;Parent=MsG0180002810.01.T01
Chr1 exon 45656207 45656352 45656207 ID=MsG0180002810.01.T01:exon:38707;Parent=MsG0180002810.01.T01
Chr1 exon 45656509 45656614 45656509 ID=MsG0180002810.01.T01:exon:38708;Parent=MsG0180002810.01.T01
Chr1 exon 45657228 45657287 45657228 ID=MsG0180002810.01.T01:exon:38709;Parent=MsG0180002810.01.T01
Chr1 exon 45657395 45657490 45657395 ID=MsG0180002810.01.T01:exon:38710;Parent=MsG0180002810.01.T01
Chr1 exon 45658447 45658604 45658447 ID=MsG0180002810.01.T01:exon:38711;Parent=MsG0180002810.01.T01
Chr1 CDS 45650710 45650900 45650710 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 CDS 45650982 45651132 45650982 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 CDS 45654478 45654767 45654478 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 CDS 45654861 45655012 45654861 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 CDS 45655798 45655880 45655798 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 CDS 45656207 45656352 45656207 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 CDS 45656509 45656614 45656509 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 CDS 45657228 45657287 45657228 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 CDS 45657395 45657415 45657395 ID=MsG0180002810.01.T01:cds;Parent=MsG0180002810.01.T01
Chr1 three_prime_UTR 45657416 45657490 45657416 ID=MsG0180002810.01.T01:three_prime_utr;Parent=MsG0180002810.01.T01
Chr1 three_prime_UTR 45658447 45658604 45658447 ID=MsG0180002810.01.T01:three_prime_utr;Parent=MsG0180002810.01.T01
Gene Sequence

>MsG0180002810.01.T01

ATGATTTTTGATAATGGGTTAAATGAGAGTATAAAGATTGAAATTCCGACCGACGCTGGCATTGCGATAGTATTGAAAGTCAAAACCCTAAAAATGGCAGAAGAAGCAGTAGCCGCCGCCGCAGTAGCACTGGAATCATTGTCCGTCGCTGAATCATCATCTACCAATCCAAATCCAAATCCAGCACCGCAGTTGTTGAGTGCGGAACAGAGATTTGAGATCGTGAGAAGCATCGGAGAAGAGTGCATTCAAGAAGATGAACTTCTTAACCTCCTCGCTAAAAAGCCTCAGCCTGTTTGTTACGATGGTTTTGAACCTTCTGGACGAATGCACATTGCTCAGGGTGTCATGAAAACAATCAATGTGAACAAGCTAACATCCGCTGGTTGCCTAGTCAAAATATGGATTGCTGATTGGTTTGCTAAGCTTAATAACAAAATGGGTGGAGATTTGAAGAAAATTGAGATTGTTGGCCGCTACTTGATCGAAATTTGGAAAGCCGTTGGGATGGATCTGGAAGGAGGAAAAGTTGAGTTTTTGTGGTCGTCTAAAGAGATTAATGCCAGAGCTGATGAGTATTGGCCTCTTGTGTTGGATATAGCTCAGAAGAACAACCTTAAAAGAATTATCAGGTGTAGCCAAATTATGGGACGGAGTGAACAAGATGAATTAACCGCTGCTCAAATATTCTATCCATGCATGCAGTGTGCTGACATTTTTTTCCTCAAGGTGAAGTTCACTCTTTCCCTATATATTGATGCTTGCATTGATTGCTTGAACTTATACATGTTACCTGGTCTACAACAAGGGCAAGAGAAGATGTCAAAAAGTGACCCTTTATCATCCATTTACATGGAGGATGAAGAGGCCGAAGTGAATGTGAAAATAAAAAAGGCATATTGCCCGCCAAAGATTGTGGAAGGAAACCCATGCTTGGAGTACATTAAATATCTTATCTTACCTTGGTTTAACGAGTTTACTGTGGAGCGTAATGCAGATAATGGTGGTAATAAGACGTTCAAAAGCTTTGAAGAGTTGATTGCCGACTATGAAAGCGGAGAGTTACATCCAGCTGACCTTAAACCGGCTTTGTCGAAGTCATTGAATAAAATTCTAGAGCCTGTAAGGCAACACTTCAAAAATGACAGCAATGCTAAAGAGCTACTAAAAAGAGTCAAGGCTTACAGGGTCACCAAGTAA
Protein sequence

>MsG0180002810.01.T01

MIFDNGLNESIKIEIPTDAGIAIVLKVKTLKMAEEAVAAAAVALESLSVAESSSTNPNPNPAPQLLSAEQRFEIVRSIGEECIQEDELLNLLAKKPQPVCYDGFEPSGRMHIAQGVMKTINVNKLTSAGCLVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINARADEYWPLVLDIAQKNNLKRIIRCSQIMGRSEQDELTAAQIFYPCMQCADIFFLKVKFTLSLYIDACIDCLNLYMLPGLQQGQEKMSKSDPLSSIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYLILPWFNEFTVERNADNGGNKTFKSFEELIADYESGELHPADLKPALSKSLNKILEPVRQHFKNDSNAKELLKRVKAYRVTK*