AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040444.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040444.01.T01 MTR_7g089780 73.464 358 71 6 9 357 291 633 4.89e-170 500
MsG0780040444.01.T01 MTR_7g089780 87.342 79 10 0 368 446 755 833 1.37e-38 149
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 222 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAATCTCTCTGTTGATTT+TGG 0.067059 7:+77652140 None:intergenic
TCTTGTTCATGATCCCTTTC+TGG 0.086737 7:+77650600 None:intergenic
GGATATGAAGTTGAAGATTT+TGG 0.173828 7:-77655187 MsG0780040444.01.T01:five_prime_UTR
ATTAAGGTTGGTTCCATTAT+TGG 0.180842 7:-77650984 MsG0780040444.01.T01:three_prime_UTR
CCTACATCGAAGGCAGTATT+TGG 0.182366 7:+77652943 None:intergenic
CAATGATTTCTCAGCTTTCT+TGG 0.183532 7:-77655435 MsG0780040444.01.T01:five_prime_UTR
GTAGCAGTTGGCTGCATATT+TGG 0.192060 7:-77651078 MsG0780040444.01.T01:CDS
GGCTCACACTTTGGTGGAAT+TGG 0.208025 7:-77653361 MsG0780040444.01.T01:CDS
TCAAAAGGTTTCTCCAATAA+TGG 0.215341 7:+77650971 None:intergenic
AACTGTCATACCATCAATAT+TGG 0.223957 7:-77655779 MsG0780040444.01.T01:five_prime_UTR
CTTGAGTTATCAACAATTCT+TGG 0.231983 7:-77651179 MsG0780040444.01.T01:CDS
GATGATAAAAGTAACTTAAT+TGG 0.235269 7:-77650562 MsG0780040444.01.T01:three_prime_UTR
AAGTTTGAGATTACACTTTC+TGG 0.243067 7:-77650522 MsG0780040444.01.T01:three_prime_UTR
AGAGGATGGATGGCTGATTT+TGG 0.243979 7:-77652844 MsG0780040444.01.T01:CDS
TTATCCTGCTGTATTTATTA+AGG 0.245649 7:-77651000 MsG0780040444.01.T01:three_prime_UTR
CAAACCCTATTGAACTCTTT+TGG 0.248131 7:+77654576 None:intergenic
TTTGAATTGTTTATGTGTTT+TGG 0.252225 7:+77655685 None:intergenic
ACGTTCCTGTCTCAGGATTT+TGG 0.253778 7:-77653544 MsG0780040444.01.T01:CDS
ATAGGATTAATCAATGAATT+TGG 0.255569 7:-77655222 MsG0780040444.01.T01:five_prime_UTR
TGCTTCCAGAGTGGAATATC+TGG 0.269196 7:-77653634 MsG0780040444.01.T01:CDS
TGCATAAACAAATGGCCTTT+TGG 0.269553 7:+77655041 None:intergenic
CTGCTAACTTGGTTAGTTAC+AGG 0.271881 7:-77654415 MsG0780040444.01.T01:intron
CAATAATGGGAATGCATATA+TGG 0.288175 7:-77652968 MsG0780040444.01.T01:CDS
TTATGAACATGTTCATCATT+AGG 0.289122 7:+77651202 None:intergenic
GAATATAGAACCGCGTCAAC+GGG 0.305740 7:+77652811 None:intergenic
AGCTCCAGTGTACAGAAAAT+TGG 0.308573 7:+77653756 None:intergenic
CTCAGAAAACTAGACCAATT+TGG 0.308722 7:-77655371 MsG0780040444.01.T01:five_prime_UTR
GTTGACGCGGTTCTATATTC+AGG 0.313245 7:-77652808 MsG0780040444.01.T01:intron
CAAAACCAAAAGAGTTCAAT+AGG 0.317943 7:-77654581 MsG0780040444.01.T01:five_prime_UTR
TATGAACATGTTCATCATTA+GGG 0.321975 7:+77651203 None:intergenic
TTTCTGTGAAATGTTCAATT+AGG 0.337554 7:+77653675 None:intergenic
AATAGAGAGCCTTGGACATT+AGG 0.338490 7:+77655506 None:intergenic
CCATGATTCACTTCCTTGTT+CGG 0.340613 7:+77651040 None:intergenic
ATAACAGATATCCTGAACTA+TGG 0.342076 7:-77652164 MsG0780040444.01.T01:CDS
TTCTTTCCTTTGTCAAGAAC+AGG 0.344396 7:+77651133 None:intergenic
CTTCCTGTGATCAAACAAAT+AGG 0.354146 7:+77655130 None:intergenic
CCGATGCTGTACGCCGTGTT+TGG 0.357828 7:-77653586 MsG0780040444.01.T01:CDS
CATCAAACCATTGATGATAT+AGG 0.359766 7:-77655240 MsG0780040444.01.T01:five_prime_UTR
TTGGTGTATAATTCATGTTT+TGG 0.364334 7:+77650431 None:intergenic
CCTTGTTCTTGAACTAAGAT+AGG 0.364449 7:+77654470 None:intergenic
AGTGGATGAACAAAGATATT+GGG 0.364811 7:-77653336 MsG0780040444.01.T01:CDS
CAAAAGAGTTCAATAGGGTT+TGG 0.366276 7:-77654575 MsG0780040444.01.T01:five_prime_UTR
TATTGGTGAAAGACAATAAT+GGG 0.369012 7:-77652981 MsG0780040444.01.T01:CDS
TTACAAACTATGTTAAATAT+CGG 0.370492 7:+77650722 None:intergenic
CATTTGTTTATGCAAGTATT+GGG 0.375354 7:-77655032 MsG0780040444.01.T01:five_prime_UTR
AAGTGGATGAACAAAGATAT+TGG 0.375947 7:-77653337 MsG0780040444.01.T01:CDS
AATCTGAGTATTCAATCATT+TGG 0.376850 7:-77650625 MsG0780040444.01.T01:three_prime_UTR
CAAACAGATTCTACTTGAAA+TGG 0.378043 7:-77652881 MsG0780040444.01.T01:CDS
ACCATCAATATTGGGTGGCT+TGG 0.379588 7:-77655770 MsG0780040444.01.T01:five_prime_UTR
CTTTCTTGGTCCACAATCAA+TGG 0.379909 7:-77655421 MsG0780040444.01.T01:five_prime_UTR
CCATTTGTTTATGCAAGTAT+TGG 0.380130 7:-77655033 MsG0780040444.01.T01:five_prime_UTR
TTAGTTCAAGAACAAGGTAT+TGG 0.380621 7:-77654464 MsG0780040444.01.T01:CDS
CACTGGAGCTTGCAGATATA+CGG 0.381170 7:-77653743 MsG0780040444.01.T01:CDS
AAGCATTACCGGAGCTAGAC+AGG 0.385122 7:+77653252 None:intergenic
CAAAGTGTGACAGAGTTTGA+TGG 0.389027 7:+77651434 None:intergenic
TTTGATGGTTTGAGTAAAAC+TGG 0.389311 7:+77651449 None:intergenic
TGTAAGTAAGCTTTCAAGTC+AGG 0.394700 7:-77650704 MsG0780040444.01.T01:three_prime_UTR
TGGTATAATCATATCCTTCC+AGG 0.400938 7:+77654129 None:intergenic
TGAAGCTAGTGTACAGATAT+AGG 0.403174 7:-77650654 MsG0780040444.01.T01:three_prime_UTR
TATCACTTTAGCTGCTAACT+TGG 0.404655 7:-77654426 MsG0780040444.01.T01:CDS
TTCTCATAAGTTTCCTCCAC+TGG 0.410241 7:+77650766 None:intergenic
CCATCAATATTGGGTGGCTT+GGG 0.410600 7:-77655769 MsG0780040444.01.T01:five_prime_UTR
GCTCACACTTTGGTGGAATT+GGG 0.413738 7:-77653360 MsG0780040444.01.T01:CDS
CAATCATTTGGCACCAGAAA+GGG 0.414708 7:-77650613 MsG0780040444.01.T01:three_prime_UTR
TAATCAAATAAATATAATAT+AGG 0.417791 7:+77655615 None:intergenic
GGGGATGGGTCTAGCGGAAG+GGG 0.419087 7:-77650883 MsG0780040444.01.T01:three_prime_UTR
GTGATGAGTCCAGAAGCTTC+TGG 0.420160 7:-77654735 MsG0780040444.01.T01:intron
GAGGCAAAACAGTTGGATAT+TGG 0.423553 7:-77652998 MsG0780040444.01.T01:CDS
ATCTTGTGAAGATAAAGCTT+TGG 0.425183 7:+77655475 None:intergenic
CCTGCTGTATTTATTAAGGT+TGG 0.427200 7:-77650996 MsG0780040444.01.T01:three_prime_UTR
AAGGATGAATGCCAACCAAC+GGG 0.427735 7:-77650903 MsG0780040444.01.T01:three_prime_UTR
GATTAATCCTATATCATCAA+TGG 0.428287 7:+77655233 None:intergenic
TGTATTGGTTTCTTCAGTGC+AGG 0.430997 7:-77654628 MsG0780040444.01.T01:five_prime_UTR
CCAATTTGGTCTACAATCTC+AGG 0.431661 7:-77655357 MsG0780040444.01.T01:five_prime_UTR
ACTTATGACGTTCCTGTCTC+AGG 0.433122 7:-77653551 MsG0780040444.01.T01:CDS
CCTGAGATTGTAGACCAAAT+TGG 0.434883 7:+77655357 None:intergenic
AATGAAGCATTCATTGAAGA+AGG 0.436188 7:-77650922 MsG0780040444.01.T01:three_prime_UTR
CGATGCTGTACGCCGTGTTT+GGG 0.438290 7:-77653585 MsG0780040444.01.T01:CDS
CCAATACTTGCATAAACAAA+TGG 0.438927 7:+77655033 None:intergenic
AATACAGCAGGATAACCTAT+TGG 0.441828 7:+77651008 None:intergenic
AAAACCAAAAGAGTTCAATA+GGG 0.442082 7:-77654580 MsG0780040444.01.T01:five_prime_UTR
AATTTCTCATATGAATTTCA+AGG 0.443254 7:-77654503 MsG0780040444.01.T01:CDS
CCCAAGCCACCCAATATTGA+TGG 0.447807 7:+77655769 None:intergenic
TTGACAGGGCAGGAGGTGAT+TGG 0.450945 7:-77654207 MsG0780040444.01.T01:intron
AACAAGAAAACAATGTATAT+AGG 0.452434 7:-77650584 MsG0780040444.01.T01:three_prime_UTR
ACTGTCATACCATCAATATT+GGG 0.452474 7:-77655778 MsG0780040444.01.T01:five_prime_UTR
ATATTGGTGAAAGACAATAA+TGG 0.455299 7:-77652982 MsG0780040444.01.T01:CDS
CATGTTCATCATTAGGGTAA+TGG 0.458098 7:+77651209 None:intergenic
ACAGAGAGATTGTGGAAGAA+TGG 0.458297 7:-77652131 MsG0780040444.01.T01:CDS
GTCTTCCTTCAACTTGTCCA+AGG 0.464772 7:+77652098 None:intergenic
CCGAACAAGGAAGTGAATCA+TGG 0.465495 7:-77651040 MsG0780040444.01.T01:CDS
TCTCAGCAGGATTCAAACCT+TGG 0.465528 7:+77650836 None:intergenic
CCAAATACTGCCTTCGATGT+AGG 0.466466 7:-77652943 MsG0780040444.01.T01:CDS
GGAATGGTGGTTGGTGCAGA+AGG 0.466873 7:+77655527 None:intergenic
GGAATATCTGGGGCTATAGT+TGG 0.468299 7:-77653622 MsG0780040444.01.T01:CDS
AAGTTAGCAGCTAAAGTGAT+AGG 0.474949 7:+77654428 None:intergenic
ACCAAAGTGTGAGCCAATCA+TGG 0.477073 7:+77653369 None:intergenic
AGAATGGAAAAGTAAATCCT+TGG 0.478857 7:-77652115 MsG0780040444.01.T01:CDS
CATATGAATTTCAAGGGGAA+AGG 0.484725 7:-77654496 MsG0780040444.01.T01:CDS
AGAAAGAGGTGGCGGCATAC+AGG 0.485434 7:+77651232 None:intergenic
TAAATCCTTGGACAAGTTGA+AGG 0.490011 7:-77652103 MsG0780040444.01.T01:CDS
TGGGGCTATAGTTGGAATGC+AGG 0.493339 7:-77653614 MsG0780040444.01.T01:CDS
ATGATTGGCTCACACTTTGG+TGG 0.498611 7:-77653367 MsG0780040444.01.T01:CDS
ACGGGGATGGGTCTAGCGGA+AGG 0.499436 7:-77650885 MsG0780040444.01.T01:three_prime_UTR
TGAATATAGAACCGCGTCAA+CGG 0.500768 7:+77652810 None:intergenic
TTGAAGGAAGACAAAGAAGA+TGG 0.501509 7:-77652087 MsG0780040444.01.T01:intron
GAATGCCAACCAACGGGGAT+GGG 0.503237 7:-77650897 MsG0780040444.01.T01:three_prime_UTR
ACCATGATTGGCTCACACTT+TGG 0.503591 7:-77653370 MsG0780040444.01.T01:CDS
CGGGGATGGGTCTAGCGGAA+GGG 0.505462 7:-77650884 MsG0780040444.01.T01:three_prime_UTR
AGAAGCTTCTGGAATTTACA+AGG 0.508592 7:-77654724 MsG0780040444.01.T01:five_prime_UTR
AGTTATCAACAATTCTTGGT+TGG 0.510221 7:-77651175 MsG0780040444.01.T01:CDS
TCTCCTATTTGTTTGATCAC+AGG 0.512275 7:-77655133 MsG0780040444.01.T01:five_prime_UTR
ATATGAATTTCAAGGGGAAA+GGG 0.515667 7:-77654495 MsG0780040444.01.T01:CDS
CATTAGGGTAATGGAGAAAG+AGG 0.516353 7:+77651218 None:intergenic
AGTTGGCTGCATATTTGGAC+AGG 0.517374 7:-77651073 MsG0780040444.01.T01:CDS
ATGTCGGCATCTCTCTCAGC+AGG 0.518796 7:+77650823 None:intergenic
TCATGGATAGAAGCTCCAAT+AGG 0.521819 7:-77651023 MsG0780040444.01.T01:exon
TCCGCTAGACCCATCCCCGT+TGG 0.522003 7:+77650888 None:intergenic
GAGAATGTTTGTTTAAAGTG+TGG 0.522176 7:+77655637 None:intergenic
AATTGATGAATAGAGAGCCT+TGG 0.522284 7:+77655498 None:intergenic
CAAGAACAAGGTATTGGAAG+AGG 0.523278 7:-77654458 MsG0780040444.01.T01:CDS
TCAATCATTTGGCACCAGAA+AGG 0.524252 7:-77650614 MsG0780040444.01.T01:three_prime_UTR
GCCTTGGACATTAGGAATGG+TGG 0.524690 7:+77655514 None:intergenic
TGAATGCCAACCAACGGGGA+TGG 0.525445 7:-77650898 MsG0780040444.01.T01:three_prime_UTR
ATGAACAAAGATATTGGGGT+TGG 0.527562 7:-77653331 MsG0780040444.01.T01:CDS
GCTTCCAGAGTGGAATATCT+GGG 0.527861 7:-77653633 MsG0780040444.01.T01:CDS
GAACATTTCACAGAAACCAT+TGG 0.527950 7:-77653668 MsG0780040444.01.T01:CDS
GGATTAATCAATGAATTTGG+TGG 0.528589 7:-77655219 MsG0780040444.01.T01:five_prime_UTR
TTTGTAGTTCAGTAATAATG+TGG 0.529026 7:-77654947 MsG0780040444.01.T01:five_prime_UTR
ACTTGACAGAGTACAGATAC+AGG 0.529662 7:-77654090 MsG0780040444.01.T01:intron
ATATACAGTTTGAATCCAAA+AGG 0.529774 7:-77655056 MsG0780040444.01.T01:five_prime_UTR
GGTTGGTTCTGAGTTTCTAG+TGG 0.531402 7:-77651158 MsG0780040444.01.T01:CDS
GGGCAGAGAGAAACCATGAT+TGG 0.534957 7:-77653382 MsG0780040444.01.T01:CDS
ATTTCTCATATGAATTTCAA+GGG 0.535115 7:-77654502 MsG0780040444.01.T01:CDS
ATATTCCACTCTGGAAGCAC+TGG 0.535235 7:+77653638 None:intergenic
ATTGAAGGGCGGATATTGCA+TGG 0.536273 7:-77653713 MsG0780040444.01.T01:CDS
TAACAGATATCCTGAACTAT+GGG 0.537517 7:-77652163 MsG0780040444.01.T01:CDS
TGTAACCAAAATCCTGAGAC+AGG 0.541890 7:+77653539 None:intergenic
GAGGCCGAGAGGGTTTGTAT+TGG 0.542213 7:-77654643 MsG0780040444.01.T01:five_prime_UTR
TTTACAAGGGTTTCAAGAAG+AGG 0.543736 7:-77654710 MsG0780040444.01.T01:five_prime_UTR
ATATACGGAAACTCAATTGA+AGG 0.544165 7:-77653728 MsG0780040444.01.T01:CDS
TGTCCGACGGTGCCTCGAGT+AGG 0.544453 7:-77650796 MsG0780040444.01.T01:three_prime_UTR
TTGCATGTAGAATCTGGAAG+AGG 0.545776 7:+77655725 None:intergenic
CTAGACCCATCCCCGTTGGT+TGG 0.550534 7:+77650892 None:intergenic
GTGGTTGGTGCAGAAGGGAA+AGG 0.553206 7:+77655533 None:intergenic
TCTTCAGTGCAGGATGAAAG+TGG 0.553916 7:-77654618 MsG0780040444.01.T01:five_prime_UTR
TTGCAATCCCTGTCTAGCTC+CGG 0.554010 7:-77653260 MsG0780040444.01.T01:intron
CAAAATCAACAGAGAGATTG+TGG 0.554365 7:-77652139 MsG0780040444.01.T01:CDS
TTGGGTGGCTTGGGTCCATA+CGG 0.555005 7:-77655760 MsG0780040444.01.T01:five_prime_UTR
GTGGTTCCTGTTCTTGACAA+AGG 0.555848 7:-77651139 MsG0780040444.01.T01:CDS
GAATGGTGGTTGGTGCAGAA+GGG 0.558082 7:+77655528 None:intergenic
GTGGATGAACAAAGATATTG+GGG 0.561688 7:-77653335 MsG0780040444.01.T01:CDS
AAAAGAGGATAGGTTGGTGT+TGG 0.562926 7:-77654674 MsG0780040444.01.T01:five_prime_UTR
ACAAAGATATTGGGGTTGGA+AGG 0.564659 7:-77653327 MsG0780040444.01.T01:CDS
CAAACCCTCTCGGCCTCGAT+AGG 0.571848 7:+77654649 None:intergenic
GAAACTGTGCAGGATTGGGT+AGG 0.578944 7:-77653403 MsG0780040444.01.T01:intron
GATGTCATGTAGAATGGGGA+AGG 0.579176 7:+77654169 None:intergenic
AATGAGGTCTCTTACCTGGA+AGG 0.579625 7:-77654143 MsG0780040444.01.T01:CDS
ACAGATTCTACTTGAAATGG+TGG 0.583683 7:-77652878 MsG0780040444.01.T01:CDS
TTCTTAATTCATCCCAAACA+CGG 0.585708 7:+77653573 None:intergenic
AGTAGGATTGCTTCCAGTGG+AGG 0.585947 7:-77650779 MsG0780040444.01.T01:three_prime_UTR
ACTTTGGTGGAATTGGGAAG+TGG 0.586294 7:-77653354 MsG0780040444.01.T01:CDS
CAAAATATAATCAAACATCA+AGG 0.587676 7:+77650495 None:intergenic
CGAAGGCCTCCCCGTTGACG+CGG 0.588005 7:-77652821 MsG0780040444.01.T01:CDS
CTATTTGTTTGATCACAGGA+AGG 0.588030 7:-77655129 MsG0780040444.01.T01:five_prime_UTR
GAAGGATGAATGCCAACCAA+CGG 0.591154 7:-77650904 MsG0780040444.01.T01:three_prime_UTR
AAGCACTGGTAGCCTTCCAA+TGG 0.592511 7:+77653652 None:intergenic
CTACTTGAAATGGTGGATGA+CGG 0.593327 7:-77652871 MsG0780040444.01.T01:CDS
CCAAACACGGCGTACAGCAT+CGG 0.593757 7:+77653586 None:intergenic
GCAGGATGAAAGTGGAGTGA+TGG 0.594671 7:-77654610 MsG0780040444.01.T01:five_prime_UTR
AAACTGTGCAGGATTGGGTA+GGG 0.594862 7:-77653402 MsG0780040444.01.T01:intron
TCTTGGTCCACAATCAATGG+AGG 0.595057 7:-77655418 MsG0780040444.01.T01:five_prime_UTR
AAAATGCCCTCCATTGATTG+TGG 0.598414 7:+77655411 None:intergenic
ATCGAGCATTCCTACATCGA+AGG 0.598768 7:+77652933 None:intergenic
GGTAATGGAGAAAGAGGTGG+CGG 0.598856 7:+77651224 None:intergenic
ATTGGTATTGACAGGGCAGG+AGG 0.601923 7:-77654214 MsG0780040444.01.T01:intron
ACCAACGGGGATGGGTCTAG+CGG 0.601937 7:-77650889 MsG0780040444.01.T01:three_prime_UTR
GGGGCTATAGTTGGAATGCA+GGG 0.602027 7:-77653613 MsG0780040444.01.T01:CDS
CATTGGGAGAGAGTAGCAGT+TGG 0.604965 7:-77651090 MsG0780040444.01.T01:CDS
ATTTCACAGAAACCATTGGA+AGG 0.607756 7:-77653664 MsG0780040444.01.T01:CDS
AAACAGGAAGCAGCACAGAA+AGG 0.609719 7:-77651259 MsG0780040444.01.T01:intron
CTTGGTCCACAATCAATGGA+GGG 0.609794 7:-77655417 MsG0780040444.01.T01:five_prime_UTR
GGGACTAGTCTCTTACAAGA+TGG 0.613744 7:-77650863 MsG0780040444.01.T01:three_prime_UTR
TGGACATTAGGAATGGTGGT+TGG 0.613810 7:+77655518 None:intergenic
ATGAAAGTGATGAGAATGAG+AGG 0.615474 7:-77654545 MsG0780040444.01.T01:CDS
AAACTCTGTCACACTTTGCG+CGG 0.615548 7:-77651429 MsG0780040444.01.T01:intron
TTGAAGGGCGGATATTGCAT+GGG 0.616099 7:-77653712 MsG0780040444.01.T01:CDS
TATACGGAAACTCAATTGAA+GGG 0.617010 7:-77653727 MsG0780040444.01.T01:CDS
TTTCTCATATGAATTTCAAG+GGG 0.617228 7:-77654501 MsG0780040444.01.T01:CDS
CCAACCTTAATAAATACAGC+AGG 0.617716 7:+77650996 None:intergenic
GAAACCAATACAAACCCTCT+CGG 0.621595 7:+77654639 None:intergenic
CCTATCTTAGTTCAAGAACA+AGG 0.626318 7:-77654470 MsG0780040444.01.T01:CDS
ATGTAGAATCTGGAAGAGGT+TGG 0.626565 7:+77655729 None:intergenic
TGACGGAGTCAGAGGATGGA+TGG 0.626833 7:-77652854 MsG0780040444.01.T01:CDS
AGAGCCTTGGACATTAGGAA+TGG 0.628729 7:+77655511 None:intergenic
AAATGTTCAATTAGGTCACA+AGG 0.629845 7:+77653683 None:intergenic
ACCACCATTCCTAATGTCCA+AGG 0.629938 7:-77655515 MsG0780040444.01.T01:five_prime_UTR
ACAGAGATTGAAGAAAGTAG+AGG 0.633504 7:-77655305 MsG0780040444.01.T01:five_prime_UTR
TAGCCCCAGATATTCCACTC+TGG 0.633546 7:+77653629 None:intergenic
TCGAGTAGGATTGCTTCCAG+TGG 0.634438 7:-77650782 MsG0780040444.01.T01:three_prime_UTR
GAAGCTTCTGGAATTTACAA+GGG 0.635022 7:-77654723 MsG0780040444.01.T01:five_prime_UTR
GGTACCTATCGAGGCCGAGA+GGG 0.637283 7:-77654653 MsG0780040444.01.T01:five_prime_UTR
TGGATGACGGAGTCAGAGGA+TGG 0.638039 7:-77652858 MsG0780040444.01.T01:CDS
TAAAACTGGCTGTTGCATGA+TGG 0.638053 7:+77651463 None:intergenic
AATATAGAACCGCGTCAACG+GGG 0.646560 7:+77652812 None:intergenic
AGCATTACCGGAGCTAGACA+GGG 0.650231 7:+77653253 None:intergenic
GTCATACCATCAATATTGGG+TGG 0.650667 7:-77655775 MsG0780040444.01.T01:five_prime_UTR
GGCTACCAGTGCTTCCAGAG+TGG 0.659909 7:-77653643 MsG0780040444.01.T01:CDS
TGCCGACATTTAGTGTCCGA+CGG 0.665924 7:-77650809 MsG0780040444.01.T01:three_prime_UTR
CACCGTCGGACACTAAATGT+CGG 0.668277 7:+77650807 None:intergenic
GTTGGTGTTGGTACCTATCG+AGG 0.669645 7:-77654662 MsG0780040444.01.T01:five_prime_UTR
TCTTACAAGATGGCAAACCA+AGG 0.669755 7:-77650853 MsG0780040444.01.T01:three_prime_UTR
ATGGTGGATGACGGAGTCAG+AGG 0.669797 7:-77652862 MsG0780040444.01.T01:CDS
TAGGGTAATGGAGAAAGAGG+TGG 0.673045 7:+77651221 None:intergenic
ATAGAACCGCGTCAACGGGG+AGG 0.678721 7:+77652815 None:intergenic
CTTCCAGAGTGGAATATCTG+GGG 0.679488 7:-77653632 MsG0780040444.01.T01:CDS
AATCCTACTCGAGGCACCGT+CGG 0.680144 7:+77650793 None:intergenic
TGGTACCTATCGAGGCCGAG+AGG 0.683213 7:-77654654 MsG0780040444.01.T01:five_prime_UTR
CAACTGCTACTCTCTCCCAA+TGG 0.686540 7:+77651091 None:intergenic
ACGGAAACTCAATTGAAGGG+CGG 0.691210 7:-77653724 MsG0780040444.01.T01:CDS
ACTGGAAGCAATCCTACTCG+AGG 0.695673 7:+77650784 None:intergenic
AGGATGAATGCCAACCAACG+GGG 0.748887 7:-77650902 MsG0780040444.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTAAAAAACATATACT+TGG + Chr7:77652237-77652256 None:intergenic 10.0%
!!! TATATTTTTTTTTATCCATT+AGG + Chr7:77653748-77653767 None:intergenic 10.0%
!!! TTGATTATTTTTTTGTAAAA+TGG - Chr7:77650628-77650647 MsG0780040444.01.T01:three_prime_UTR 10.0%
!! ACTTCTTCTATATTTAATAT+AGG + Chr7:77654359-77654378 None:intergenic 15.0%
!! CATTCATATACTTATATATA+AGG + Chr7:77652437-77652456 None:intergenic 15.0%
!! TTACAAACTATGTTAAATAT+CGG + Chr7:77655508-77655527 None:intergenic 15.0%
!! TTTGAATAACCTAAAAATTT+AGG - Chr7:77655274-77655293 MsG0780040444.01.T01:five_prime_UTR 15.0%
!!! AAATTTTTAGGTTATTCAAA+AGG + Chr7:77655274-77655293 None:intergenic 15.0%
!! AACAAGAAAACAATGTATAT+AGG - Chr7:77655643-77655662 MsG0780040444.01.T01:five_prime_UTR 20.0%
!! AAGAAATTAGTTCATGATAT+TGG - Chr7:77653582-77653601 MsG0780040444.01.T01:CDS 20.0%
!! AATTTCTCATATGAATTTCA+AGG - Chr7:77651724-77651743 MsG0780040444.01.T01:intron 20.0%
!! ACTATTGATGAATAAATGAA+TGG - Chr7:77654655-77654674 MsG0780040444.01.T01:five_prime_UTR 20.0%
!! AGTTTCAAAAATATGAATCA+AGG - Chr7:77651147-77651166 MsG0780040444.01.T01:CDS 20.0%
!! ATAGGATTAATCAATGAATT+TGG - Chr7:77651005-77651024 MsG0780040444.01.T01:three_prime_UTR 20.0%
!! ATCATATTTAATGAACAGTA+AGG - Chr7:77653637-77653656 MsG0780040444.01.T01:CDS 20.0%
!! ATTTCTCATATGAATTTCAA+GGG - Chr7:77651725-77651744 MsG0780040444.01.T01:intron 20.0%
!! CAAAATATAATCAAACATCA+AGG + Chr7:77655735-77655754 None:intergenic 20.0%
!! CTGATAAAAAAAACTGAATT+AGG + Chr7:77651863-77651882 None:intergenic 20.0%
!! GATGATAAAAGTAACTTAAT+TGG - Chr7:77655665-77655684 MsG0780040444.01.T01:five_prime_UTR 20.0%
!! TGATGATTATAATTGATTGA+TGG - Chr7:77652286-77652305 MsG0780040444.01.T01:intron 20.0%
!! TGTAAAAATATTTGCATTGA+CGG - Chr7:77653946-77653965 MsG0780040444.01.T01:intron 20.0%
!!! ATTCAGTTTTTTTTATCAGT+AGG - Chr7:77651864-77651883 MsG0780040444.01.T01:intron 20.0%
!!! GATTATATTTTGTATGACAT+TGG - Chr7:77655743-77655762 MsG0780040444.01.T01:five_prime_UTR 20.0%
!!! TGATGTTTTTGGTTATTTAA+AGG + Chr7:77650658-77650677 None:intergenic 20.0%
!!! TTTAAAGTGTGGTTTTTTTT+TGG + Chr7:77650582-77650601 None:intergenic 20.0%
!!! TTTGAATTGTTTATGTGTTT+TGG + Chr7:77650545-77650564 None:intergenic 20.0%
! AAAACCAAAAGAGTTCAATA+GGG - Chr7:77651647-77651666 MsG0780040444.01.T01:intron 25.0%
! AAATCTAAGGATTGACTATT+CGG - Chr7:77654591-77654610 MsG0780040444.01.T01:five_prime_UTR 25.0%
! AAGAAAATATGTCATATTGC+AGG + Chr7:77654457-77654476 None:intergenic 25.0%
! AATCTGAGTATTCAATCATT+TGG - Chr7:77655602-77655621 MsG0780040444.01.T01:five_prime_UTR 25.0%
! AGAATGAAAACTTTCATTGA+TGG + Chr7:77654544-77654563 None:intergenic 25.0%
! ATATACAGTTTGAATCCAAA+AGG - Chr7:77651171-77651190 MsG0780040444.01.T01:CDS 25.0%
! ATATTGGTGAAAGACAATAA+TGG - Chr7:77653245-77653264 MsG0780040444.01.T01:intron 25.0%
! CAGTTTCAATAAGTAAACAA+CGG + Chr7:77652811-77652830 None:intergenic 25.0%
! CATTTGTTTATGCAAGTATT+GGG - Chr7:77651195-77651214 MsG0780040444.01.T01:CDS 25.0%
! CTCTATATTCTTATGTAAAC+AGG - Chr7:77654952-77654971 MsG0780040444.01.T01:five_prime_UTR 25.0%
! GATTAATCCTATATCATCAA+TGG + Chr7:77650997-77651016 None:intergenic 25.0%
! GTGTAAAGATGATAGAATTT+AGG + Chr7:77654880-77654899 None:intergenic 25.0%
! TATGAACATGTTCATCATTA+GGG + Chr7:77655027-77655046 None:intergenic 25.0%
! TATTGGTGAAAGACAATAAT+GGG - Chr7:77653246-77653265 MsG0780040444.01.T01:intron 25.0%
! TCTACATCAAATAACTATGT+AGG + Chr7:77653716-77653735 None:intergenic 25.0%
! TTATCCTGCTGTATTTATTA+AGG - Chr7:77655227-77655246 MsG0780040444.01.T01:five_prime_UTR 25.0%
! TTATGAACATGTTCATCATT+AGG + Chr7:77655028-77655047 None:intergenic 25.0%
! TTTCTCATATGAATTTCAAG+GGG - Chr7:77651726-77651745 MsG0780040444.01.T01:intron 25.0%
! TTTCTGTGAAATGTTCAATT+AGG + Chr7:77652555-77652574 None:intergenic 25.0%
! TTTGATTCTCATATCTTCTT+TGG - Chr7:77653443-77653462 MsG0780040444.01.T01:intron 25.0%
! TTTGTAGTTCAGTAATAATG+TGG - Chr7:77651280-77651299 MsG0780040444.01.T01:intron 25.0%
!! AGTACAATTTCAGTTTCTTT+TGG - Chr7:77653611-77653630 MsG0780040444.01.T01:CDS 25.0%
!! ATTTTTGATGTCATGTAGAA+TGG + Chr7:77652067-77652086 None:intergenic 25.0%
!! GAAATTTTACAGAATTCAAC+TGG - Chr7:77654844-77654863 MsG0780040444.01.T01:intron 25.0%
!! TGAAGAATGCCTAAATTTTT+AGG + Chr7:77655286-77655305 None:intergenic 25.0%
!! TGTGATTGTTTGAAATGTAA+AGG + Chr7:77652213-77652232 None:intergenic 25.0%
!! TTCTGTATATTTCTATCAAC+TGG + Chr7:77653525-77653544 None:intergenic 25.0%
!! TTTTTGATGTCATGTAGAAT+GGG + Chr7:77652066-77652085 None:intergenic 25.0%
!!! AGTTAAAGCTTATTTTCCAT+TGG - Chr7:77655120-77655139 MsG0780040444.01.T01:five_prime_UTR 25.0%
!!! ATGGTTTTTTTTCTTCATGA+GGG - Chr7:77654159-77654178 MsG0780040444.01.T01:CDS 25.0%
!!! CAAGATCAAACTTTTTCAAT+TGG - Chr7:77650769-77650788 MsG0780040444.01.T01:three_prime_UTR 25.0%
!!! GTTAAAGCTTATTTTCCATT+GGG - Chr7:77655121-77655140 MsG0780040444.01.T01:five_prime_UTR 25.0%
!!! GTTTTTATTGGTTTTTCTTC+AGG - Chr7:77651400-77651419 MsG0780040444.01.T01:intron 25.0%
AAAACCAATAAAAACCCTCT+CGG + Chr7:77651395-77651414 None:intergenic 30.0%
AAATGTTCAATTAGGTCACA+AGG + Chr7:77652547-77652566 None:intergenic 30.0%
AACTGTCATACCATCAATAT+TGG - Chr7:77650448-77650467 MsG0780040444.01.T01:three_prime_UTR 30.0%
AAGTAGTAGAAAAAGAGGAT+AGG - Chr7:77651347-77651366 MsG0780040444.01.T01:intron 30.0%
AAGTGGATGAACAAAGATAT+TGG - Chr7:77652890-77652909 MsG0780040444.01.T01:CDS 30.0%
ACAGTAAGGTTATTCTTCAT+AGG - Chr7:77653651-77653670 MsG0780040444.01.T01:CDS 30.0%
ACTGTCATACCATCAATATT+GGG - Chr7:77650449-77650468 MsG0780040444.01.T01:three_prime_UTR 30.0%
AGAACAAACGATATAACATC+GGG - Chr7:77653780-77653799 MsG0780040444.01.T01:intron 30.0%
AGAATGGAAAAGTAAATCCT+TGG - Chr7:77654112-77654131 MsG0780040444.01.T01:CDS 30.0%
AGTAGTAGAAAAAAGAGGAT+AGG - Chr7:77651543-77651562 MsG0780040444.01.T01:intron 30.0%
AGTGGATGAACAAAGATATT+GGG - Chr7:77652891-77652910 MsG0780040444.01.T01:CDS 30.0%
AGTTATCAACAATTCTTGGT+TGG - Chr7:77655052-77655071 MsG0780040444.01.T01:five_prime_UTR 30.0%
ATAACAGATATCCTGAACTA+TGG - Chr7:77654063-77654082 MsG0780040444.01.T01:intron 30.0%
ATATACGGAAACTCAATTGA+AGG - Chr7:77652499-77652518 MsG0780040444.01.T01:intron 30.0%
ATATGAATTTCAAGGGGAAA+GGG - Chr7:77651732-77651751 MsG0780040444.01.T01:intron 30.0%
ATCTTGTGAAGATAAAGCTT+TGG + Chr7:77650755-77650774 None:intergenic 30.0%
CAAAACCAAAAGAGTTCAAT+AGG - Chr7:77651646-77651665 MsG0780040444.01.T01:intron 30.0%
CAAACAGATTCTACTTGAAA+TGG - Chr7:77653346-77653365 MsG0780040444.01.T01:CDS 30.0%
CACAAAAACACTCAATGAAA+TGG - Chr7:77652721-77652740 MsG0780040444.01.T01:intron 30.0%
CATTACTCTCGATAAATCTA+AGG - Chr7:77654578-77654597 MsG0780040444.01.T01:five_prime_UTR 30.0%
CCAATACTTGCATAAACAAA+TGG + Chr7:77651197-77651216 None:intergenic 30.0%
CCATTTGTTTATGCAAGTAT+TGG - Chr7:77651194-77651213 MsG0780040444.01.T01:CDS 30.0%
CTTATGAGAAACCAAAAAGA+AGG - Chr7:77655474-77655493 MsG0780040444.01.T01:five_prime_UTR 30.0%
CTTGAGTTATCAACAATTCT+TGG - Chr7:77655048-77655067 MsG0780040444.01.T01:five_prime_UTR 30.0%
GAATAAAGAGTTTCTGTTGT+TGG - Chr7:77654260-77654279 MsG0780040444.01.T01:intron 30.0%
GACAGTGTGAAAATATCTTA+CGG + Chr7:77653829-77653848 None:intergenic 30.0%
GAGAACAAACGATATAACAT+CGG - Chr7:77653779-77653798 MsG0780040444.01.T01:intron 30.0%
GGATTAATCAATGAATTTGG+TGG - Chr7:77651008-77651027 MsG0780040444.01.T01:three_prime_UTR 30.0%
GGTTAAGTAGTAGAAAAAAG+AGG - Chr7:77651538-77651557 MsG0780040444.01.T01:intron 30.0%
GGTTTAAGTAGTAGAAAAAG+AGG - Chr7:77651342-77651361 MsG0780040444.01.T01:intron 30.0%
GTCAAACAAAATGATAGTAC+AGG - Chr7:77653105-77653124 MsG0780040444.01.T01:intron 30.0%
TAACAGATATCCTGAACTAT+GGG - Chr7:77654064-77654083 MsG0780040444.01.T01:intron 30.0%
TATACGGAAACTCAATTGAA+GGG - Chr7:77652500-77652519 MsG0780040444.01.T01:intron 30.0%
TCAAAAGGTTTCTCCAATAA+TGG + Chr7:77655259-77655278 None:intergenic 30.0%
TCTACATGACATCAAAAATG+AGG - Chr7:77652068-77652087 MsG0780040444.01.T01:intron 30.0%
TGATGAGTATAATTGTGCTA+AGG + Chr7:77654506-77654525 None:intergenic 30.0%
TTAGTTCAAGAACAAGGTAT+TGG - Chr7:77651763-77651782 MsG0780040444.01.T01:intron 30.0%
TTCTTAATTCATCCCAAACA+CGG + Chr7:77652657-77652676 None:intergenic 30.0%
TTTACTTATTGAAACTGTGC+AGG - Chr7:77652814-77652833 MsG0780040444.01.T01:CDS 30.0%
! AAGTTTGAGATTACACTTTC+TGG - Chr7:77655705-77655724 MsG0780040444.01.T01:five_prime_UTR 30.0%
! AATGAAGCATTCATTGAAGA+AGG - Chr7:77655305-77655324 MsG0780040444.01.T01:five_prime_UTR 30.0%
! ACAAAAAGAGAAACCTTTTG+AGG - Chr7:77653207-77653226 MsG0780040444.01.T01:intron 30.0%
! ACAGGTACTGTTACAATATA+TGG - Chr7:77652155-77652174 MsG0780040444.01.T01:CDS 30.0%
! ATTAAGGTTGGTTCCATTAT+TGG - Chr7:77655243-77655262 MsG0780040444.01.T01:five_prime_UTR 30.0%
! ATTGTTTTCTCTGACACTAT+AGG - Chr7:77653169-77653188 MsG0780040444.01.T01:intron 30.0%
! ATTTTCTACTTCACATATCC+AGG - Chr7:77654020-77654039 MsG0780040444.01.T01:intron 30.0%
! CAATAATGGGAATGCATATA+TGG - Chr7:77653259-77653278 MsG0780040444.01.T01:intron 30.0%
! CATCAAACCATTGATGATAT+AGG - Chr7:77650987-77651006 MsG0780040444.01.T01:three_prime_UTR 30.0%
! GAAATGGCGAAATTATTTCT+CGG - Chr7:77652737-77652756 MsG0780040444.01.T01:intron 30.0%
! GAGAATGTTTGTTTAAAGTG+TGG + Chr7:77650593-77650612 None:intergenic 30.0%
! GGATATGAAGTTGAAGATTT+TGG - Chr7:77651040-77651059 MsG0780040444.01.T01:CDS 30.0%
! TGAAACGTTTGTGATGTTTT+TGG + Chr7:77650669-77650688 None:intergenic 30.0%
! TTTGATGGTTTGAGTAAAAC+TGG + Chr7:77654781-77654800 None:intergenic 30.0%
! TTTTGATGTCATGTAGAATG+GGG + Chr7:77652065-77652084 None:intergenic 30.0%
!! AAGTTTTGTAAGATCGAAGA+TGG + Chr7:77652121-77652140 None:intergenic 30.0%
!! AATGAGAGGTTTTATGGTTT+TGG - Chr7:77651696-77651715 MsG0780040444.01.T01:intron 30.0%
!! ATGAGAGGTTTTATGGTTTT+GGG - Chr7:77651697-77651716 MsG0780040444.01.T01:intron 30.0%
!! GATTGATGGTGTAATAACTT+AGG - Chr7:77652300-77652319 MsG0780040444.01.T01:intron 30.0%
!! TGAATTTGGTGGTACATTTT+TGG - Chr7:77651019-77651038 MsG0780040444.01.T01:exon 30.0%
!! TGATTAAAGAGAAGCATTAC+CGG + Chr7:77652989-77653008 None:intergenic 30.0%
!! TTCATTGAGTGTTTTTGTGA+GGG + Chr7:77652720-77652739 None:intergenic 30.0%
!! TTTCATTGAGTGTTTTTGTG+AGG + Chr7:77652721-77652740 None:intergenic 30.0%
!!! ATGTGTTTTGGAGATTCTAT+GGG + Chr7:77650533-77650552 None:intergenic 30.0%
!!! CTATTGAACTCTTTTGGTTT+TGG + Chr7:77651648-77651667 None:intergenic 30.0%
!!! GATGGTTTTTTTTCTTCATG+AGG - Chr7:77654158-77654177 MsG0780040444.01.T01:CDS 30.0%
!!! TATGTGTTTTGGAGATTCTA+TGG + Chr7:77650534-77650553 None:intergenic 30.0%
!!! TTTATTGGTTTTTCTTCAGG+TGG - Chr7:77651403-77651422 MsG0780040444.01.T01:intron 30.0%
AACAATCACTAGCTCATACT+TGG + Chr7:77653992-77654011 None:intergenic 35.0%
AACCAAACCTATTGAACCTT+TGG + Chr7:77651461-77651480 None:intergenic 35.0%
AACCAAAGGTTCAATAGGTT+TGG - Chr7:77651456-77651475 MsG0780040444.01.T01:CDS 35.0%
AACTCAGCAGGCTTATAAAA+TGG - Chr7:77654925-77654944 MsG0780040444.01.T01:intron 35.0%
AAGTTAGCAGCTAAAGTGAT+AGG + Chr7:77651802-77651821 None:intergenic 35.0%
AATACAGCAGGATAACCTAT+TGG + Chr7:77655222-77655241 None:intergenic 35.0%
AATTGATGAATAGAGAGCCT+TGG + Chr7:77650732-77650751 None:intergenic 35.0%
ACACAATGATAGCCTTTCAT+TGG - Chr7:77651995-77652014 MsG0780040444.01.T01:intron 35.0%
ACAGAGATTGAAGAAAGTAG+AGG - Chr7:77650922-77650941 MsG0780040444.01.T01:three_prime_UTR 35.0%
ACAGATTCTACTTGAAATGG+TGG - Chr7:77653349-77653368 MsG0780040444.01.T01:CDS 35.0%
ACCAAAACCAAAGGTTCAAT+AGG - Chr7:77651451-77651470 MsG0780040444.01.T01:CDS 35.0%
AGTAGAAAAAGAGGATAGGT+TGG - Chr7:77651351-77651370 MsG0780040444.01.T01:intron 35.0%
ATGAAAGTGATGAGAATGAG+AGG - Chr7:77651682-77651701 MsG0780040444.01.T01:intron 35.0%
ATGAACAAAGATATTGGGGT+TGG - Chr7:77652896-77652915 MsG0780040444.01.T01:CDS 35.0%
ATGTAAAGGTTCTACAACGA+CGG + Chr7:77652199-77652218 None:intergenic 35.0%
ATTTCACAGAAACCATTGGA+AGG - Chr7:77652563-77652582 MsG0780040444.01.T01:intron 35.0%
CAAAAGAGTTCAATAGGGTT+TGG - Chr7:77651652-77651671 MsG0780040444.01.T01:intron 35.0%
CAAAATCAACAGAGAGATTG+TGG - Chr7:77654088-77654107 MsG0780040444.01.T01:intron 35.0%
CAATCGTGATCTTCCTAATA+TGG + Chr7:77653133-77653152 None:intergenic 35.0%
CAATGATTTCTCAGCTTTCT+TGG - Chr7:77650792-77650811 MsG0780040444.01.T01:three_prime_UTR 35.0%
CATATGAATTTCAAGGGGAA+AGG - Chr7:77651731-77651750 MsG0780040444.01.T01:intron 35.0%
CATGTTCATCATTAGGGTAA+TGG + Chr7:77655021-77655040 None:intergenic 35.0%
CCAACCTTAATAAATACAGC+AGG + Chr7:77655234-77655253 None:intergenic 35.0%
CCTATCTTAGTTCAAGAACA+AGG - Chr7:77651757-77651776 MsG0780040444.01.T01:intron 35.0%
CCTGCTGTATTTATTAAGGT+TGG - Chr7:77655231-77655250 MsG0780040444.01.T01:five_prime_UTR 35.0%
CCTTGTTCTTGAACTAAGAT+AGG + Chr7:77651760-77651779 None:intergenic 35.0%
CTATTTGTTTGATCACAGGA+AGG - Chr7:77651098-77651117 MsG0780040444.01.T01:CDS 35.0%
CTCAGAAAACTAGACCAATT+TGG - Chr7:77650856-77650875 MsG0780040444.01.T01:three_prime_UTR 35.0%
CTTCCTGTGATCAAACAAAT+AGG + Chr7:77651100-77651119 None:intergenic 35.0%
GAACATTTCACAGAAACCAT+TGG - Chr7:77652559-77652578 MsG0780040444.01.T01:intron 35.0%
GATGGAAATACCAAAACCAA+AGG - Chr7:77651442-77651461 MsG0780040444.01.T01:CDS 35.0%
GTAGAAAAAAGAGGATAGGT+TGG - Chr7:77651547-77651566 MsG0780040444.01.T01:intron 35.0%
GTGGATGAACAAAGATATTG+GGG - Chr7:77652892-77652911 MsG0780040444.01.T01:CDS 35.0%
TATCACTTTAGCTGCTAACT+TGG - Chr7:77651801-77651820 MsG0780040444.01.T01:intron 35.0%
TATTAGGAAGATCACGATTG+CGG - Chr7:77653133-77653152 MsG0780040444.01.T01:intron 35.0%
TATTGAAACTGTGCAGGATT+GGG - Chr7:77652820-77652839 MsG0780040444.01.T01:CDS 35.0%
TCATCAGAAAAACAAGCATG+AGG - Chr7:77651225-77651244 MsG0780040444.01.T01:CDS 35.0%
TCCAATGTCACTGTGATTAA+AGG + Chr7:77654315-77654334 None:intergenic 35.0%
TCTCCTATTTGTTTGATCAC+AGG - Chr7:77651094-77651113 MsG0780040444.01.T01:CDS 35.0%
TGAAGCTAGTGTACAGATAT+AGG - Chr7:77655573-77655592 MsG0780040444.01.T01:five_prime_UTR 35.0%
TGGTATAATCATATCCTTCC+AGG + Chr7:77652101-77652120 None:intergenic 35.0%
TGTAGAAAACTCACTCCTAA+TGG - Chr7:77653730-77653749 MsG0780040444.01.T01:CDS 35.0%
TTACAGAATTCAACTGGTGA+AGG - Chr7:77654850-77654869 MsG0780040444.01.T01:intron 35.0%
TTACTTAGCAGTGGAATTTC+TGG - Chr7:77654284-77654303 MsG0780040444.01.T01:intron 35.0%
TTATTGAAACTGTGCAGGAT+TGG - Chr7:77652819-77652838 MsG0780040444.01.T01:CDS 35.0%
TTCTTTCCTTTGTCAAGAAC+AGG + Chr7:77655097-77655116 None:intergenic 35.0%
TTGAAGGAAGACAAAGAAGA+TGG - Chr7:77654140-77654159 MsG0780040444.01.T01:CDS 35.0%
TTGTAAATTCCAGAAGCTTC+TGG + Chr7:77651504-77651523 None:intergenic 35.0%
TTTAATCACAGTGACATTGG+AGG - Chr7:77654314-77654333 MsG0780040444.01.T01:intron 35.0%
TTTACAAGGGTTTCAAGAAG+AGG - Chr7:77651517-77651536 MsG0780040444.01.T01:intron 35.0%
! CAAACCCTATTGAACTCTTT+TGG + Chr7:77651654-77651673 None:intergenic 35.0%
! GATGAGAATGAGAGGTTTTA+TGG - Chr7:77651690-77651709 MsG0780040444.01.T01:intron 35.0%
! GTTTCCAATTTTCTGTACAC+TGG - Chr7:77652467-77652486 MsG0780040444.01.T01:intron 35.0%
! GTTTTCTTGCATGTAGAATC+TGG + Chr7:77650511-77650530 None:intergenic 35.0%
! TAAATCCTTGGACAAGTTGA+AGG - Chr7:77654124-77654143 MsG0780040444.01.T01:CDS 35.0%
! TGAACCAAGTTGCAGTTTTT+GGG + Chr7:77653328-77653347 None:intergenic 35.0%
! TGCATAAACAAATGGCCTTT+TGG + Chr7:77651189-77651208 None:intergenic 35.0%
! TGTAAGTAAGCTTTCAAGTC+AGG - Chr7:77655523-77655542 MsG0780040444.01.T01:five_prime_UTR 35.0%
! TTGAACCAAGTTGCAGTTTT+TGG + Chr7:77653329-77653348 None:intergenic 35.0%
! TTTCGCAAACTTCTGAGAAA+TGG + Chr7:77652786-77652805 None:intergenic 35.0%
!! AAAAGAGAAACCTTTTGAGG+AGG - Chr7:77653210-77653229 MsG0780040444.01.T01:intron 35.0%
!! ACCTATTGAACCTTTGGTTT+TGG + Chr7:77651455-77651474 None:intergenic 35.0%
!! AGAAGCTTCTGGAATTTACA+AGG - Chr7:77651503-77651522 MsG0780040444.01.T01:intron 35.0%
!! CCATGCTGTGTATATTTTTG+CGG + Chr7:77654825-77654844 None:intergenic 35.0%
!! GAAGCTTCTGGAATTTACAA+GGG - Chr7:77651504-77651523 MsG0780040444.01.T01:intron 35.0%
!! TATTTTGGGAAGGAGATCAA+TGG - Chr7:77654216-77654235 MsG0780040444.01.T01:intron 35.0%
!! TGAGAGGTTTTATGGTTTTG+GGG - Chr7:77651698-77651717 MsG0780040444.01.T01:intron 35.0%
!! TGTAATAACTTAGGTGCTGA+TGG - Chr7:77652309-77652328 MsG0780040444.01.T01:intron 35.0%
!! TTTACAAGGGTTTTGTCAAG+AGG - Chr7:77651321-77651340 MsG0780040444.01.T01:intron 35.0%
!! TTTTAGAGATAGCCCGAAAT+GGG - Chr7:77654187-77654206 MsG0780040444.01.T01:CDS 35.0%
!! TTTTTAGAGATAGCCCGAAA+TGG - Chr7:77654186-77654205 MsG0780040444.01.T01:CDS 35.0%
!!! AGGAAAGTATTTTCCGAACA+AGG - Chr7:77655174-77655193 MsG0780040444.01.T01:five_prime_UTR 35.0%
!!! AGTGTGGTTTTTTTTTGGAG+AGG + Chr7:77650577-77650596 None:intergenic 35.0%
!!! CACAATCTCTCTGTTGATTT+TGG + Chr7:77654090-77654109 None:intergenic 35.0%
!!! GTGTGGTTTTTTTTTGGAGA+GGG + Chr7:77650576-77650595 None:intergenic 35.0%
!!! TTAGAAAACCCTTTTGAAGC+AGG + Chr7:77653500-77653519 None:intergenic 35.0%
!!! TTTTTTTGGAGAGGGAATGT+TGG + Chr7:77650568-77650587 None:intergenic 35.0%
!!! TTTTTTTTCTTCATGAGGGC+TGG - Chr7:77654163-77654182 MsG0780040444.01.T01:CDS 35.0%
AAAATAGCATCCCCCATTTC+GGG + Chr7:77654202-77654221 None:intergenic 40.0%
AATAGAGAGCCTTGGACATT+AGG + Chr7:77650724-77650743 None:intergenic 40.0%
ACAAAGATATTGGGGTTGGA+AGG - Chr7:77652900-77652919 MsG0780040444.01.T01:CDS 40.0%
ACAGAGAGATTGTGGAAGAA+TGG - Chr7:77654096-77654115 MsG0780040444.01.T01:CDS 40.0%
ACTTGACAGAGTACAGATAC+AGG - Chr7:77652137-77652156 MsG0780040444.01.T01:CDS 40.0%
AGCTCCAGTGTACAGAAAAT+TGG + Chr7:77652474-77652493 None:intergenic 40.0%
AGGTTGGAAAAAAGTCCGTA+TGG + Chr7:77650485-77650504 None:intergenic 40.0%
ATGTACAAAGCAAACTCAGC+AGG - Chr7:77654913-77654932 MsG0780040444.01.T01:intron 40.0%
ATGTAGAATCTGGAAGAGGT+TGG + Chr7:77650501-77650520 None:intergenic 40.0%
CAAAAATGAGGTCTCTTACC+TGG - Chr7:77652080-77652099 MsG0780040444.01.T01:intron 40.0%
CAAAATAGCATCCCCCATTT+CGG + Chr7:77654203-77654222 None:intergenic 40.0%
CAAAGTGTGACAGAGTTTGA+TGG + Chr7:77654796-77654815 None:intergenic 40.0%
CAATCATTTGGCACCAGAAA+GGG - Chr7:77655614-77655633 MsG0780040444.01.T01:five_prime_UTR 40.0%
CAGAAAAACAAGCATGAGGT+TGG - Chr7:77651229-77651248 MsG0780040444.01.T01:CDS 40.0%
CCAATTTGGTCTACAATCTC+AGG - Chr7:77650870-77650889 MsG0780040444.01.T01:three_prime_UTR 40.0%
CCATGATTCACTTCCTTGTT+CGG + Chr7:77655190-77655209 None:intergenic 40.0%
CCGCAAAAATATACACAGCA+TGG - Chr7:77654822-77654841 MsG0780040444.01.T01:intron 40.0%
CCTGAGATTGTAGACCAAAT+TGG + Chr7:77650873-77650892 None:intergenic 40.0%
CTTTCTTGGTCCACAATCAA+TGG - Chr7:77650806-77650825 MsG0780040444.01.T01:three_prime_UTR 40.0%
GAAACCAATACAAACCCTCT+CGG + Chr7:77651591-77651610 None:intergenic 40.0%
GAGGCAAAACAGTTGGATAT+TGG - Chr7:77653229-77653248 MsG0780040444.01.T01:intron 40.0%
GCCTTTAATCACAGTGACAT+TGG - Chr7:77654311-77654330 MsG0780040444.01.T01:intron 40.0%
GCTGAAATAGAATCTTCACC+TGG + Chr7:77654041-77654060 None:intergenic 40.0%
GTCACACTCACACATATGAT+TGG - Chr7:77653907-77653926 MsG0780040444.01.T01:intron 40.0%
GTCATACCATCAATATTGGG+TGG - Chr7:77650452-77650471 MsG0780040444.01.T01:three_prime_UTR 40.0%
TAAAACTGGCTGTTGCATGA+TGG + Chr7:77654767-77654786 None:intergenic 40.0%
TCAATCATTTGGCACCAGAA+AGG - Chr7:77655613-77655632 MsG0780040444.01.T01:five_prime_UTR 40.0%
TCATGGATAGAAGCTCCAAT+AGG - Chr7:77655204-77655223 MsG0780040444.01.T01:five_prime_UTR 40.0%
TCTTACAAGATGGCAAACCA+AGG - Chr7:77655374-77655393 MsG0780040444.01.T01:five_prime_UTR 40.0%
TCTTGTTCATGATCCCTTTC+TGG + Chr7:77655630-77655649 None:intergenic 40.0%
TGAATATAGAACCGCGTCAA+CGG + Chr7:77653420-77653439 None:intergenic 40.0%
TGTAACCAAAATCCTGAGAC+AGG + Chr7:77652691-77652710 None:intergenic 40.0%
TTCTCATAAGTTTCCTCCAC+TGG + Chr7:77655464-77655483 None:intergenic 40.0%
TTGCATGTAGAATCTGGAAG+AGG + Chr7:77650505-77650524 None:intergenic 40.0%
TTTAGAGATAGCCCGAAATG+GGG - Chr7:77654188-77654207 MsG0780040444.01.T01:CDS 40.0%
! AAAATGCCCTCCATTGATTG+TGG + Chr7:77650819-77650838 None:intergenic 40.0%
! AACTGTTTTGCCTCCTCAAA+AGG + Chr7:77653223-77653242 None:intergenic 40.0%
! CGGAGATTCAACCTTCTTTT+TGG + Chr7:77655488-77655507 None:intergenic 40.0%
! CTGCTAACTTGGTTAGTTAC+AGG - Chr7:77651812-77651831 MsG0780040444.01.T01:intron 40.0%
! GATAGTACAGGTGCCATATT+AGG - Chr7:77653117-77653136 MsG0780040444.01.T01:intron 40.0%
! TGCTGAGTTTGCTTTGTACA+TGG + Chr7:77654914-77654933 None:intergenic 40.0%
!! AAAAGAGGATAGGTTGGTGT+TGG - Chr7:77651357-77651376 MsG0780040444.01.T01:intron 40.0%
!! AATAACTTAGGTGCTGATGG+CGG - Chr7:77652312-77652331 MsG0780040444.01.T01:intron 40.0%
!! AGAATTGCTTTTGCGTTGGA+TGG - Chr7:77654381-77654400 MsG0780040444.01.T01:intron 40.0%
!! AGCCTTTCATTGGTATTGAC+AGG - Chr7:77652005-77652024 MsG0780040444.01.T01:intron 40.0%
!! CAACTCACTTTAGAGTGTAG+AGG - Chr7:77654621-77654640 MsG0780040444.01.T01:five_prime_UTR 40.0%
!! CAAGAACAAGGTATTGGAAG+AGG - Chr7:77651769-77651788 MsG0780040444.01.T01:intron 40.0%
!! CATTAGGGTAATGGAGAAAG+AGG + Chr7:77655012-77655031 None:intergenic 40.0%
!! CCAGAGTTCTGGATTTACAA+GGG - Chr7:77651308-77651327 MsG0780040444.01.T01:intron 40.0%
!! CTACTTGAAATGGTGGATGA+CGG - Chr7:77653356-77653375 MsG0780040444.01.T01:CDS 40.0%
!! GCCTTTCATTGGTATTGACA+GGG - Chr7:77652006-77652025 MsG0780040444.01.T01:intron 40.0%
!! GTCAAGAATTGCTTTTGCGT+TGG - Chr7:77654377-77654396 MsG0780040444.01.T01:intron 40.0%
!! GTTGTTGGTTTACTTAGCAG+TGG - Chr7:77654275-77654294 MsG0780040444.01.T01:intron 40.0%
!! TCCAGAGTTCTGGATTTACA+AGG - Chr7:77651307-77651326 MsG0780040444.01.T01:intron 40.0%
!! TGTATTGGTTTCTTCAGTGC+AGG - Chr7:77651599-77651618 MsG0780040444.01.T01:intron 40.0%
!! TTGATTTTGGCCCATAGTTC+AGG + Chr7:77654077-77654096 None:intergenic 40.0%
!! TTTTGAGGAGGCAAAACAGT+TGG - Chr7:77653222-77653241 MsG0780040444.01.T01:intron 40.0%
!!! AAAACCCTTTTGAAGCAGGT+AGG + Chr7:77653496-77653515 None:intergenic 40.0%
!!! ATTGGTTTTTCTTCAGGTGG+AGG - Chr7:77651406-77651425 MsG0780040444.01.T01:intron 40.0%
!!! GAAATGGGGGATGCTATTTT+GGG - Chr7:77654202-77654221 MsG0780040444.01.T01:CDS 40.0%
!!! TGTCTCAGGATTTTGGTTAC+AGG - Chr7:77652690-77652709 MsG0780040444.01.T01:intron 40.0%
AAACAGGAAGCAGCACAGAA+AGG - Chr7:77654968-77654987 MsG0780040444.01.T01:five_prime_UTR 45.0%
AAACTCTGTCACACTTTGCG+CGG - Chr7:77654798-77654817 MsG0780040444.01.T01:intron 45.0%
AAACTGTGCAGGATTGGGTA+GGG - Chr7:77652825-77652844 MsG0780040444.01.T01:CDS 45.0%
AACCTCCTACCTGCTTCAAA+AGG - Chr7:77653488-77653507 MsG0780040444.01.T01:intron 45.0%
AAGGATGAATGCCAACCAAC+GGG - Chr7:77655324-77655343 MsG0780040444.01.T01:five_prime_UTR 45.0%
AATATAGAACCGCGTCAACG+GGG + Chr7:77653418-77653437 None:intergenic 45.0%
AATGAGGTCTCTTACCTGGA+AGG - Chr7:77652084-77652103 MsG0780040444.01.T01:intron 45.0%
ACCAAAGTGTGAGCCAATCA+TGG + Chr7:77652861-77652880 None:intergenic 45.0%
ACCACCATTCCTAATGTCCA+AGG - Chr7:77650712-77650731 MsG0780040444.01.T01:three_prime_UTR 45.0%
ACCATCAATATTGGGTGGCT+TGG - Chr7:77650457-77650476 MsG0780040444.01.T01:three_prime_UTR 45.0%
ACCTCCTACCTGCTTCAAAA+GGG - Chr7:77653489-77653508 MsG0780040444.01.T01:intron 45.0%
ACGGAAACTCAATTGAAGGG+CGG - Chr7:77652503-77652522 MsG0780040444.01.T01:intron 45.0%
ACTTATGACGTTCCTGTCTC+AGG - Chr7:77652676-77652695 MsG0780040444.01.T01:intron 45.0%
ACTTTGGTGGAATTGGGAAG+TGG - Chr7:77652873-77652892 MsG0780040444.01.T01:CDS 45.0%
AGAGCCTTGGACATTAGGAA+TGG + Chr7:77650719-77650738 None:intergenic 45.0%
AGTTGGCTGCATATTTGGAC+AGG - Chr7:77655154-77655173 MsG0780040444.01.T01:five_prime_UTR 45.0%
ATCGAGCATTCCTACATCGA+AGG + Chr7:77653297-77653316 None:intergenic 45.0%
ATTGAAGGGCGGATATTGCA+TGG - Chr7:77652514-77652533 MsG0780040444.01.T01:intron 45.0%
CACTGGAGCTTGCAGATATA+CGG - Chr7:77652484-77652503 MsG0780040444.01.T01:intron 45.0%
CCAAATACTGCCTTCGATGT+AGG - Chr7:77653284-77653303 MsG0780040444.01.T01:CDS 45.0%
CCAACAATTTGCGCTAGACT+CGG - Chr7:77651934-77651953 MsG0780040444.01.T01:intron 45.0%
CCATCAATATTGGGTGGCTT+GGG - Chr7:77650458-77650477 MsG0780040444.01.T01:three_prime_UTR 45.0%
CCCTTGTAAATCCAGAACTC+TGG + Chr7:77651311-77651330 None:intergenic 45.0%
CCGAACAAGGAAGTGAATCA+TGG - Chr7:77655187-77655206 MsG0780040444.01.T01:five_prime_UTR 45.0%
CCTACATCGAAGGCAGTATT+TGG + Chr7:77653287-77653306 None:intergenic 45.0%
CTCACCCAAAAACTGCAACT+TGG - Chr7:77653321-77653340 MsG0780040444.01.T01:CDS 45.0%
CTTCCAGAGTGGAATATCTG+GGG - Chr7:77652595-77652614 MsG0780040444.01.T01:intron 45.0%
CTTGGTCCACAATCAATGGA+GGG - Chr7:77650810-77650829 MsG0780040444.01.T01:three_prime_UTR 45.0%
GAAGGAGATCAATGGTGAGT+TGG - Chr7:77654224-77654243 MsG0780040444.01.T01:intron 45.0%
GAAGGATGAATGCCAACCAA+CGG - Chr7:77655323-77655342 MsG0780040444.01.T01:five_prime_UTR 45.0%
GAATATAGAACCGCGTCAAC+GGG + Chr7:77653419-77653438 None:intergenic 45.0%
GATGTCATGTAGAATGGGGA+AGG + Chr7:77652061-77652080 None:intergenic 45.0%
GCCCTGTCAATACCAATGAA+AGG + Chr7:77652010-77652029 None:intergenic 45.0%
GCTCACACTTTGGTGGAATT+GGG - Chr7:77652867-77652886 MsG0780040444.01.T01:CDS 45.0%
GCTTCCAGAGTGGAATATCT+GGG - Chr7:77652594-77652613 MsG0780040444.01.T01:intron 45.0%
GTAGCAGTTGGCTGCATATT+TGG - Chr7:77655149-77655168 MsG0780040444.01.T01:five_prime_UTR 45.0%
GTCTTCCTTCAACTTGTCCA+AGG + Chr7:77654132-77654151 None:intergenic 45.0%
GTGGTTCCTGTTCTTGACAA+AGG - Chr7:77655088-77655107 MsG0780040444.01.T01:five_prime_UTR 45.0%
GTTGACGCGGTTCTATATTC+AGG - Chr7:77653419-77653438 MsG0780040444.01.T01:intron 45.0%
TCTCAGCAGGATTCAAACCT+TGG + Chr7:77655394-77655413 None:intergenic 45.0%
TCTTCAGTGCAGGATGAAAG+TGG - Chr7:77651609-77651628 MsG0780040444.01.T01:intron 45.0%
TCTTGGTCCACAATCAATGG+AGG - Chr7:77650809-77650828 MsG0780040444.01.T01:three_prime_UTR 45.0%
TGCTTCCAGAGTGGAATATC+TGG - Chr7:77652593-77652612 MsG0780040444.01.T01:intron 45.0%
TGGACATTAGGAATGGTGGT+TGG + Chr7:77650712-77650731 None:intergenic 45.0%
TTAGAGATAGCCCGAAATGG+GGG - Chr7:77654189-77654208 MsG0780040444.01.T01:CDS 45.0%
TTGAAGGGCGGATATTGCAT+GGG - Chr7:77652515-77652534 MsG0780040444.01.T01:intron 45.0%
! ACCATGATTGGCTCACACTT+TGG - Chr7:77652857-77652876 MsG0780040444.01.T01:CDS 45.0%
! ACGTTCCTGTCTCAGGATTT+TGG - Chr7:77652683-77652702 MsG0780040444.01.T01:intron 45.0%
! ATATTCCACTCTGGAAGCAC+TGG + Chr7:77652592-77652611 None:intergenic 45.0%
! ATGATTGGCTCACACTTTGG+TGG - Chr7:77652860-77652879 MsG0780040444.01.T01:CDS 45.0%
! GGAATATCTGGGGCTATAGT+TGG - Chr7:77652605-77652624 MsG0780040444.01.T01:intron 45.0%
! GTGAGTTGGCAAGCAAATGA+TGG - Chr7:77654238-77654257 MsG0780040444.01.T01:intron 45.0%
! TGATGCTTTTCCTGCAACCA+GGG - Chr7:77654734-77654753 MsG0780040444.01.T01:intron 45.0%
!! AGAGGATGGATGGCTGATTT+TGG - Chr7:77653383-77653402 MsG0780040444.01.T01:CDS 45.0%
!! CGAAATGGGGGATGCTATTT+TGG - Chr7:77654201-77654220 MsG0780040444.01.T01:CDS 45.0%
!! GGGACTAGTCTCTTACAAGA+TGG - Chr7:77655364-77655383 MsG0780040444.01.T01:five_prime_UTR 45.0%
!! GGTTGGTTCTGAGTTTCTAG+TGG - Chr7:77655069-77655088 MsG0780040444.01.T01:five_prime_UTR 45.0%
!! GTGGAGTGTTGTACATCTCA+GGG + Chr7:77651904-77651923 None:intergenic 45.0%
!! TAGGGTAATGGAGAAAGAGG+TGG + Chr7:77655009-77655028 None:intergenic 45.0%
!! TGCATGATGGTTTGTTTCCC+TGG + Chr7:77654754-77654773 None:intergenic 45.0%
!! TGCTTTTGTTTCAGCTGCAG+TGG - Chr7:77650895-77650914 MsG0780040444.01.T01:three_prime_UTR 45.0%
!! TGTGGAGTGTTGTACATCTC+AGG + Chr7:77651905-77651924 None:intergenic 45.0%
!! TTCATTGGTATTGACAGGGC+AGG - Chr7:77652010-77652029 MsG0780040444.01.T01:intron 45.0%
!! TAATCAAATAAATATAATAT+AGG + Chr7:77650615-77650634 None:intergenic 5.0%
AAGCATTACCGGAGCTAGAC+AGG + Chr7:77652978-77652997 None:intergenic 50.0%
AATTGTTGGTGCGCAGTGTG+TGG + Chr7:77651923-77651942 None:intergenic 50.0%
ACTGGAAGCAATCCTACTCG+AGG + Chr7:77655446-77655465 None:intergenic 50.0%
AGCATTACCGGAGCTAGACA+GGG + Chr7:77652977-77652996 None:intergenic 50.0%
AGGATGAATGCCAACCAACG+GGG - Chr7:77655325-77655344 MsG0780040444.01.T01:five_prime_UTR 50.0%
AGTAGGATTGCTTCCAGTGG+AGG - Chr7:77655448-77655467 MsG0780040444.01.T01:five_prime_UTR 50.0%
ATGTGGTGTCTCCAGAGTTC+TGG - Chr7:77651297-77651316 MsG0780040444.01.T01:intron 50.0%
CAACTGCTACTCTCTCCCAA+TGG + Chr7:77655139-77655158 None:intergenic 50.0%
CACCGTCGGACACTAAATGT+CGG + Chr7:77655423-77655442 None:intergenic 50.0%
CATTGGGAGAGAGTAGCAGT+TGG - Chr7:77655137-77655156 MsG0780040444.01.T01:five_prime_UTR 50.0%
CCCAAGCCACCCAATATTGA+TGG + Chr7:77650461-77650480 None:intergenic 50.0%
CCGAGTCTAGCGCAAATTGT+TGG + Chr7:77651937-77651956 None:intergenic 50.0%
CTTCAGGTGGAGGATGAAAG+TGG - Chr7:77651416-77651435 MsG0780040444.01.T01:intron 50.0%
GAAACTGTGCAGGATTGGGT+AGG - Chr7:77652824-77652843 MsG0780040444.01.T01:CDS 50.0%
GCAGGATGAAAGTGGAGTGA+TGG - Chr7:77651617-77651636 MsG0780040444.01.T01:intron 50.0%
GCCTTGGACATTAGGAATGG+TGG + Chr7:77650716-77650735 None:intergenic 50.0%
GGAGGATGAAAGTGGAGTGA+TGG - Chr7:77651424-77651443 MsG0780040444.01.T01:intron 50.0%
GGCTCACACTTTGGTGGAAT+TGG - Chr7:77652866-77652885 MsG0780040444.01.T01:CDS 50.0%
GGGCAGAGAGAAACCATGAT+TGG - Chr7:77652845-77652864 MsG0780040444.01.T01:CDS 50.0%
GGGGCTATAGTTGGAATGCA+GGG - Chr7:77652614-77652633 MsG0780040444.01.T01:intron 50.0%
GTGATGAGTCCAGAAGCTTC+TGG - Chr7:77651492-77651511 MsG0780040444.01.T01:intron 50.0%
TAGCCCCAGATATTCCACTC+TGG + Chr7:77652601-77652620 None:intergenic 50.0%
TCGAGTAGGATTGCTTCCAG+TGG - Chr7:77655445-77655464 MsG0780040444.01.T01:five_prime_UTR 50.0%
TGCCGACATTTAGTGTCCGA+CGG - Chr7:77655418-77655437 MsG0780040444.01.T01:five_prime_UTR 50.0%
TGGGGCTATAGTTGGAATGC+AGG - Chr7:77652613-77652632 MsG0780040444.01.T01:intron 50.0%
! CTGATGCTTTTCCTGCAACC+AGG - Chr7:77654733-77654752 MsG0780040444.01.T01:intron 50.0%
! GAATGGTGGTTGGTGCAGAA+GGG + Chr7:77650702-77650721 None:intergenic 50.0%
! GAGGCCGAGAGGGTTTTTAT+TGG - Chr7:77651388-77651407 MsG0780040444.01.T01:intron 50.0%
! TTGCAATCCCTGTCTAGCTC+CGG - Chr7:77652967-77652986 MsG0780040444.01.T01:CDS 50.0%
!! AAGCACTGGTAGCCTTCCAA+TGG + Chr7:77652578-77652597 None:intergenic 50.0%
!! ATTGGTATTGACAGGGCAGG+AGG - Chr7:77652013-77652032 MsG0780040444.01.T01:intron 50.0%
!! GGTAATGGAGAAAGAGGTGG+CGG + Chr7:77655006-77655025 None:intergenic 50.0%
!! GTTGGTGTTGGTACCTATCG+AGG - Chr7:77651369-77651388 MsG0780040444.01.T01:intron 50.0%
!! TGGATGGCTGATTTTGGCGA+AGG - Chr7:77653389-77653408 MsG0780040444.01.T01:CDS 50.0%
!! TGGTTTGTTTCCCTGGTTGC+AGG + Chr7:77654747-77654766 None:intergenic 50.0%
!!! ACCCTTTTGAAGCAGGTAGG+AGG + Chr7:77653493-77653512 None:intergenic 50.0%
!!! TGGGGGATGCTATTTTGGGA+AGG - Chr7:77654206-77654225 MsG0780040444.01.T01:intron 50.0%
AAAACCCTCTCGGCCTCGAT+AGG + Chr7:77651385-77651404 None:intergenic 55.0%
ATGTCGGCATCTCTCTCAGC+AGG + Chr7:77655407-77655426 None:intergenic 55.0%
CCAAACACGGCGTACAGCAT+CGG + Chr7:77652644-77652663 None:intergenic 55.0%
CGATGCTGTACGCCGTGTTT+GGG - Chr7:77652642-77652661 MsG0780040444.01.T01:intron 55.0%
GAATGCCAACCAACGGGGAT+GGG - Chr7:77655330-77655349 MsG0780040444.01.T01:five_prime_UTR 55.0%
GAGGCCGAGAGGGTTTGTAT+TGG - Chr7:77651584-77651603 MsG0780040444.01.T01:intron 55.0%
TGAATGCCAACCAACGGGGA+TGG - Chr7:77655329-77655348 MsG0780040444.01.T01:five_prime_UTR 55.0%
TGACGGAGTCAGAGGATGGA+TGG - Chr7:77653373-77653392 MsG0780040444.01.T01:CDS 55.0%
TTGACAGGGCAGGAGGTGAT+TGG - Chr7:77652020-77652039 MsG0780040444.01.T01:intron 55.0%
! AGAAAGAGGTGGCGGCATAC+AGG + Chr7:77654998-77655017 None:intergenic 55.0%
! GGAATGGTGGTTGGTGCAGA+AGG + Chr7:77650703-77650722 None:intergenic 55.0%
! GTGGTTGGTGCAGAAGGGAA+AGG + Chr7:77650697-77650716 None:intergenic 55.0%
! TTGGGTGGCTTGGGTCCATA+CGG - Chr7:77650467-77650486 MsG0780040444.01.T01:three_prime_UTR 55.0%
!! AATCCTACTCGAGGCACCGT+CGG + Chr7:77655437-77655456 None:intergenic 55.0%
!! ATGGTGGATGACGGAGTCAG+AGG - Chr7:77653365-77653384 MsG0780040444.01.T01:CDS 55.0%
!! TGGATGACGGAGTCAGAGGA+TGG - Chr7:77653369-77653388 MsG0780040444.01.T01:CDS 55.0%
ACCAACGGGGATGGGTCTAG+CGG - Chr7:77655338-77655357 MsG0780040444.01.T01:five_prime_UTR 60.0%
ATAGAACCGCGTCAACGGGG+AGG + Chr7:77653415-77653434 None:intergenic 60.0%
CAAACCCTCTCGGCCTCGAT+AGG + Chr7:77651581-77651600 None:intergenic 60.0%
CCGATGCTGTACGCCGTGTT+TGG - Chr7:77652641-77652660 MsG0780040444.01.T01:intron 60.0%
CTAGACCCATCCCCGTTGGT+TGG + Chr7:77655338-77655357 None:intergenic 60.0%
GGCTACCAGTGCTTCCAGAG+TGG - Chr7:77652584-77652603 MsG0780040444.01.T01:intron 60.0%
GGTACCTATCGAGGCCGAGA+GGG - Chr7:77651378-77651397 MsG0780040444.01.T01:intron 60.0%
TGGTACCTATCGAGGCCGAG+AGG - Chr7:77651377-77651396 MsG0780040444.01.T01:intron 60.0%
ACGGGGATGGGTCTAGCGGA+AGG - Chr7:77655342-77655361 MsG0780040444.01.T01:five_prime_UTR 65.0%
CGGGGATGGGTCTAGCGGAA+GGG - Chr7:77655343-77655362 MsG0780040444.01.T01:five_prime_UTR 65.0%
GGGGATGGGTCTAGCGGAAG+GGG - Chr7:77655344-77655363 MsG0780040444.01.T01:five_prime_UTR 65.0%
TCCGCTAGACCCATCCCCGT+TGG + Chr7:77655342-77655361 None:intergenic 65.0%
TGTCCGACGGTGCCTCGAGT+AGG - Chr7:77655431-77655450 MsG0780040444.01.T01:five_prime_UTR 65.0%
CGAAGGCCTCCCCGTTGACG+CGG - Chr7:77653406-77653425 MsG0780040444.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 77650436 77655813 77650436 ID=MsG0780040444.01;Name=MsG0780040444.01
Chr7 mRNA 77650436 77655813 77650436 ID=MsG0780040444.01.T01;Parent=MsG0780040444.01;Name=MsG0780040444.01.T01;_AED=0.34;_eAED=0.34;_QI=1053|0.62|0.66|1|0.87|0.77|9|600|451
Chr7 exon 77650436 77651275 77650436 ID=MsG0780040444.01.T01:exon:15491;Parent=MsG0780040444.01.T01
Chr7 exon 77651430 77651494 77651430 ID=MsG0780040444.01.T01:exon:15490;Parent=MsG0780040444.01.T01
Chr7 exon 77652088 77652207 77652088 ID=MsG0780040444.01.T01:exon:15489;Parent=MsG0780040444.01.T01
Chr7 exon 77652809 77653058 77652809 ID=MsG0780040444.01.T01:exon:15488;Parent=MsG0780040444.01.T01
Chr7 exon 77653261 77653413 77653261 ID=MsG0780040444.01.T01:exon:15487;Parent=MsG0780040444.01.T01
Chr7 exon 77653538 77653781 77653538 ID=MsG0780040444.01.T01:exon:15486;Parent=MsG0780040444.01.T01
Chr7 exon 77654091 77654222 77654091 ID=MsG0780040444.01.T01:exon:15485;Parent=MsG0780040444.01.T01
Chr7 exon 77654416 77654744 77654416 ID=MsG0780040444.01.T01:exon:15484;Parent=MsG0780040444.01.T01
Chr7 exon 77654938 77655813 77654938 ID=MsG0780040444.01.T01:exon:15483;Parent=MsG0780040444.01.T01
Chr7 five_prime_UTR 77654938 77655813 77654938 ID=MsG0780040444.01.T01:five_prime_utr;Parent=MsG0780040444.01.T01
Chr7 five_prime_UTR 77654568 77654744 77654568 ID=MsG0780040444.01.T01:five_prime_utr;Parent=MsG0780040444.01.T01
Chr7 CDS 77654416 77654567 77654416 ID=MsG0780040444.01.T01:cds;Parent=MsG0780040444.01.T01
Chr7 CDS 77654091 77654222 77654091 ID=MsG0780040444.01.T01:cds;Parent=MsG0780040444.01.T01
Chr7 CDS 77653538 77653781 77653538 ID=MsG0780040444.01.T01:cds;Parent=MsG0780040444.01.T01
Chr7 CDS 77653261 77653413 77653261 ID=MsG0780040444.01.T01:cds;Parent=MsG0780040444.01.T01
Chr7 CDS 77652809 77653058 77652809 ID=MsG0780040444.01.T01:cds;Parent=MsG0780040444.01.T01
Chr7 CDS 77652088 77652207 77652088 ID=MsG0780040444.01.T01:cds;Parent=MsG0780040444.01.T01
Chr7 CDS 77651430 77651494 77651430 ID=MsG0780040444.01.T01:cds;Parent=MsG0780040444.01.T01
Chr7 CDS 77651036 77651275 77651036 ID=MsG0780040444.01.T01:cds;Parent=MsG0780040444.01.T01
Chr7 three_prime_UTR 77650436 77651035 77650436 ID=MsG0780040444.01.T01:three_prime_utr;Parent=MsG0780040444.01.T01
Gene Sequence

>MsG0780040444.01.T01

ATGAAAGTGATGAGAATGAGAGGTTTTATGGTTTTGGGGAGCAATTTCTCATATGAATTTCAAGGGGAAAGGGTACCTATCTTAGTTCAAGAACAAGGTATTGGAAGAGGTGATCAACCTATCACTTTAGCTGCTAACTTGGTTAGTTACAGGGCAGGAGGTGATTGGAGTACAACATATGCTCCTTCCCCATTCTACATGACATCAAAAATGAGGTCTCTTACCTGGAAGGATATGATTATACCATCTTCGATCTTACAAAACTTGACAGAGTACAGATACAGTTTCCAATTTTCTGTACACTGGAGCTTGCAGATATACGGAAACTCAATTGAAGGGCGGATATTGCATGGGAACACTCCTTGTGACCTAATTGAACATTTCACAGAAACCATTGGAAGGCTACCAGTGCTTCCAGAGTGGAATATCTGGGGCTATAGTTGGAATGCAGGGTGCACCGATGCTGTACGCCGTGTTTGGGATGAATTAAGAACTTATGACGTTCCTGTCTCAGGATTTTGGTTACAGGATTGGGTAGGGCAGAGAGAAACCATGATTGGCTCACACTTTGGTGGAATTGGGAAGTGGATGAACAAAGATATTGGGGTTGGAAGGAACTTCTCAATGATCTCAGCACTCAACATAAAAGTTATGACGTATTGCAATCCCTGTCTAGCTCCGGTTGATGAGAAGAATAACAAAAAGAGAAACCTTTTGAGGAGGCAAAACAGTTGGATATTGGTGAAAGACAATAATGGGAATGCATATATGGTTCCAAATACTGCCTTCGATGTAGGAATGCTCGATCTAACTCACCCAAAAACTGCAACTTGGTTCAAACAGATTCTACTTGAAATGGTGGATGACGGAGTCAGAGGATGGATGGCTGATTTTGGCGAAGGCCTCCCCGTTGACGCGGTTCTATATTCAGGTGAAGATTCTATTTCAGCTCATAACAGATATCCTGAACTATGGGCCAAAATCAACAGAGAGATTGTGGAAGAATGGAAAAGTAAATCCTTGGACAAGTTGAAGGAAGACAAAGAAGATGGGAAACAAACCATCATGCAACAGCCAGTTTTACTCAAACCATCAAACTCTGTCACACTTTGCGCGGAAGCAGCACAGAAAGGATTGCCTGTATGCCGCCACCTCTTTCTCCATTACCCTAATGATGAACATGTTCATAACTTGAGTTATCAACAATTCTTGGTTGGTTCTGAGTTTCTAGTGGTTCCTGTTCTTGACAAAGGAAAGAAGAAAGTTAAAGCTTATTTTCCATTGGGAGAGAGTAGCAGTTGGCTGCATATTTGGACAGGAAAGTATTTTCCGAACAAGGAAGTGAATCATGGATAG
Protein sequence

>MsG0780040444.01.T01

MKVMRMRGFMVLGSNFSYEFQGERVPILVQEQGIGRGDQPITLAANLVSYRAGGDWSTTYAPSPFYMTSKMRSLTWKDMIIPSSILQNLTEYRYSFQFSVHWSLQIYGNSIEGRILHGNTPCDLIEHFTETIGRLPVLPEWNIWGYSWNAGCTDAVRRVWDELRTYDVPVSGFWLQDWVGQRETMIGSHFGGIGKWMNKDIGVGRNFSMISALNIKVMTYCNPCLAPVDEKNNKKRNLLRRQNSWILVKDNNGNAYMVPNTAFDVGMLDLTHPKTATWFKQILLEMVDDGVRGWMADFGEGLPVDAVLYSGEDSISAHNRYPELWAKINREIVEEWKSKSLDKLKEDKEDGKQTIMQQPVLLKPSNSVTLCAEAAQKGLPVCRHLFLHYPNDEHVHNLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWLHIWTGKYFPNKEVNHG*