Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048016.01.T01 | AES79543.1 | 94.059 | 202 | 12 | 0 | 1 | 202 | 1 | 202 | 7.16E-136 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048016.01.T01 | Q8RX71 | 45.283 | 212 | 90 | 5 | 19 | 213 | 10 | 212 | 4.65E-49 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048016.01.T01 | G7KSC2 | 94.059 | 202 | 12 | 0 | 1 | 202 | 1 | 202 | 3.42e-136 | 390 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048016.01 | MsG0080048845.01 | 0.803633 | 3.176028e-49 | 1.604031e-46 |
| MsG0080048016.01 | MsG0080048938.01 | 0.835076 | 2.071308e-56 | 2.505230e-53 |
| MsG0080048016.01 | MsG0080049130.01 | 0.807483 | 4.945158e-50 | 2.757621e-47 |
| MsG0080048016.01 | MsG0080049147.01 | 0.816913 | 4.326718e-52 | 3.105986e-49 |
| MsG0080048016.01 | MsG0180000114.01 | 0.853898 | 1.762483e-61 | 3.866932e-58 |
| MsG0080048016.01 | MsG0180000246.01 | 0.844388 | 7.796235e-59 | 1.256581e-55 |
| MsG0080048016.01 | MsG0180000482.01 | 0.840322 | 9.324895e-58 | 1.323385e-54 |
| MsG0080048016.01 | MsG0180000599.01 | 0.842171 | 3.044085e-58 | 4.576501e-55 |
| MsG0080048016.01 | MsG0180000843.01 | 0.814399 | 1.571621e-51 | 1.053478e-48 |
| MsG0080048016.01 | MsG0180000854.01 | 0.820985 | 5.136301e-53 | 4.126719e-50 |
| MsG0080048016.01 | MsG0180000977.01 | 0.811741 | 6.015045e-51 | 3.753251e-48 |
| MsG0080048016.01 | MsG0180001064.01 | 0.820832 | 5.568225e-53 | 4.454519e-50 |
| MsG0080048016.01 | MsG0180001100.01 | 0.841320 | 5.103801e-58 | 7.471049e-55 |
| MsG0080048016.01 | MsG0180001105.01 | 0.836647 | 8.277475e-57 | 1.049577e-53 |
| MsG0080048016.01 | MsG0180002399.01 | 0.807859 | 4.114329e-50 | 2.316779e-47 |
| MsG0080048016.01 | MsG0180003189.01 | 0.808155 | 3.557989e-50 | 2.019376e-47 |
| MsG0080048016.01 | MsG0180003253.01 | 0.816041 | 6.783245e-52 | 4.754848e-49 |
| MsG0080048016.01 | MsG0180003357.01 | 0.836254 | 1.042088e-56 | 1.306252e-53 |
| MsG0080048016.01 | MsG0180003821.01 | 0.814638 | 1.391248e-51 | 9.385934e-49 |
| MsG0080048016.01 | MsG0180004025.01 | 0.808574 | 2.896423e-50 | 1.661973e-47 |
| MsG0080048016.01 | MsG0180004103.01 | 0.810094 | 1.367430e-50 | 8.168553e-48 |
| MsG0080048016.01 | MsG0180004448.01 | 0.806910 | 6.538625e-50 | 3.592262e-47 |
| MsG0080048016.01 | MsG0180004684.01 | 0.811520 | 6.718113e-51 | 4.167700e-48 |
| MsG0080048016.01 | MsG0180004934.01 | 0.816321 | 5.874209e-52 | 4.149249e-49 |
| MsG0080048016.01 | MsG0180005184.01 | 0.800813 | 1.208457e-48 | 5.680456e-46 |
| MsG0080048016.01 | MsG0180005220.01 | 0.800131 | 1.663941e-48 | 7.687714e-46 |
| MsG0080048016.01 | MsG0180005240.01 | 0.807751 | 4.336491e-50 | 2.435142e-47 |
| MsG0080048016.01 | MsG0180005339.01 | 0.825220 | 5.278890e-54 | 4.782053e-51 |
| MsG0080048016.01 | MsG0180005391.01 | 0.810895 | 9.180900e-51 | 5.602292e-48 |
| MsG0080048016.01 | MsG0180005397.01 | 0.828051 | 1.114209e-54 | 1.095089e-51 |
| MsG0080048016.01 | MsG0180005408.01 | 0.834974 | 2.197580e-56 | 2.650288e-53 |
| MsG0080048016.01 | MsG0180005418.01 | 0.858365 | 8.659774e-63 | 2.204711e-59 |
| MsG0080048016.01 | MsG0180005509.01 | 0.831899 | 1.284682e-55 | 1.413482e-52 |
| MsG0080048016.01 | MsG0180005787.01 | 0.815461 | 9.138176e-52 | 6.304485e-49 |
| MsG0080048016.01 | MsG0180005829.01 | 0.812970 | 3.242339e-51 | 2.090575e-48 |
| MsG0080048016.01 | MsG0180006104.01 | 0.844962 | 5.461551e-59 | 8.964317e-56 |
| MsG0080048016.01 | MsG0280006465.01 | 0.800968 | 1.123529e-48 | 5.302582e-46 |
| MsG0080048016.01 | MsG0280006634.01 | 0.816723 | 4.774973e-52 | 3.409891e-49 |
| MsG0080048016.01 | MsG0280006669.01 | 0.862691 | 4.234369e-64 | 1.251017e-60 |
| MsG0080048016.01 | MsG0280008419.01 | 0.835080 | 2.065971e-56 | 2.499170e-53 |
| MsG0080048016.01 | MsG0280008928.01 | 0.819083 | 1.399211e-52 | 1.066163e-49 |
| MsG0080048016.01 | MsG0280008929.01 | 0.847734 | 9.586463e-60 | 1.720166e-56 |
| MsG0080048016.01 | MsG0280008932.01 | 0.865326 | 6.403352e-65 | 2.074956e-61 |
| MsG0080048016.01 | MsG0280009256.01 | 0.800777 | 1.229377e-48 | 5.773529e-46 |
| MsG0080048016.01 | MsG0280009435.01 | 0.812498 | 4.112548e-51 | 2.619072e-48 |
| MsG0080048016.01 | MsG0280009436.01 | 0.804291 | 2.317844e-49 | 1.190594e-46 |
| MsG0080048016.01 | MsG0280009685.01 | 0.816846 | 4.480599e-52 | 3.210509e-49 |
| MsG0080048016.01 | MsG0280009756.01 | 0.809056 | 2.285389e-50 | 1.328172e-47 |
| MsG0080048016.01 | MsG0280010181.01 | 0.802085 | 6.631944e-49 | 3.219592e-46 |
| MsG0080048016.01 | MsG0280010254.01 | 0.809861 | 1.534793e-50 | 9.112674e-48 |
| MsG0080048016.01 | MsG0280010288.01 | 0.819917 | 9.030360e-53 | 7.042822e-50 |
| MsG0080048016.01 | MsG0280010564.01 | 0.848022 | 7.987975e-60 | 1.446217e-56 |
| MsG0080048016.01 | MsG0280011073.01 | 0.884689 | 1.547006e-71 | 1.030641e-67 |
| MsG0080048016.01 | MsG0280011287.01 | 0.802679 | 5.003647e-49 | 2.466089e-46 |
| MsG0080048016.01 | MsG0280011401.01 | 0.826140 | 3.193367e-54 | 2.969569e-51 |
| MsG0080048016.01 | MsG0380011656.01 | 0.846425 | 2.190007e-59 | 3.768028e-56 |
| MsG0080048016.01 | MsG0380012011.01 | 0.804611 | 1.987562e-49 | 1.029376e-46 |
| MsG0080048016.01 | MsG0380012184.01 | 0.838135 | 3.441385e-57 | 4.566683e-54 |
| MsG0080048016.01 | MsG0380013050.01 | -0.834720 | 2.545624e-56 | 3.046113e-53 |
| MsG0080048016.01 | MsG0380013853.01 | 0.816628 | 5.014558e-52 | 3.571678e-49 |
| MsG0080048016.01 | MsG0380014538.01 | 0.840020 | 1.117990e-57 | 1.572226e-54 |
| MsG0080048016.01 | MsG0380014727.01 | 0.838174 | 3.364156e-57 | 4.469261e-54 |
| MsG0080048016.01 | MsG0380014866.01 | 0.826641 | 2.426945e-54 | 2.289200e-51 |
| MsG0080048016.01 | MsG0380015372.01 | 0.812842 | 3.458590e-51 | 2.222397e-48 |
| MsG0080048016.01 | MsG0380015438.01 | 0.807184 | 5.720358e-50 | 3.165241e-47 |
| MsG0080048016.01 | MsG0380015547.01 | 0.819469 | 1.142381e-52 | 8.799083e-50 |
| MsG0080048016.01 | MsG0380015637.01 | 0.806931 | 6.471904e-50 | 3.557579e-47 |
| MsG0080048016.01 | MsG0380015745.01 | 0.815355 | 9.647008e-52 | 6.635962e-49 |
| MsG0080048016.01 | MsG0380015847.01 | -0.806734 | 7.124367e-50 | 3.896345e-47 |
| MsG0080048016.01 | MsG0380015896.01 | 0.810730 | 9.970283e-51 | 6.057113e-48 |
| MsG0080048016.01 | MsG0380016182.01 | 0.804303 | 2.304988e-49 | 1.184337e-46 |
| MsG0080048016.01 | MsG0380016194.01 | 0.843349 | 1.479971e-58 | 2.309252e-55 |
| MsG0080048016.01 | MsG0380016284.01 | 0.811545 | 6.636235e-51 | 4.119538e-48 |
| MsG0080048016.01 | MsG0380016740.01 | 0.856418 | 3.260648e-62 | 7.777956e-59 |
| MsG0080048016.01 | MsG0380016963.01 | 0.807614 | 4.637664e-50 | 2.594836e-47 |
| MsG0080048016.01 | MsG0380017037.01 | 0.841890 | 3.610445e-58 | 5.380331e-55 |
| MsG0080048016.01 | MsG0380017085.01 | 0.801350 | 9.387124e-49 | 4.473010e-46 |
| MsG0080048016.01 | MsG0380017338.01 | 0.826407 | 2.759655e-54 | 2.585880e-51 |
| MsG0080048016.01 | MsG0380017728.01 | 0.804960 | 1.680399e-49 | 8.782201e-47 |
| MsG0080048016.01 | MsG0380017931.01 | 0.810896 | 9.178867e-51 | 5.601211e-48 |
| MsG0080048016.01 | MsG0380018046.01 | -0.822558 | 2.221909e-53 | 1.866234e-50 |
| MsG0080048016.01 | MsG0480018402.01 | 0.820623 | 6.219708e-53 | 4.946228e-50 |
| MsG0080048016.01 | MsG0480018847.01 | 0.836019 | 1.195647e-56 | 1.487807e-53 |
| MsG0080048016.01 | MsG0480018848.01 | 0.800449 | 1.433771e-48 | 6.677815e-46 |
| MsG0080048016.01 | MsG0480018911.01 | 0.833011 | 6.812295e-56 | 7.746025e-53 |
| MsG0080048016.01 | MsG0480019007.01 | 0.808369 | 3.204483e-50 | 1.829000e-47 |
| MsG0080048016.01 | MsG0480020024.01 | 0.821010 | 5.067815e-53 | 4.074690e-50 |
| MsG0080048016.01 | MsG0480021168.01 | 0.806769 | 7.003194e-50 | 3.833453e-47 |
| MsG0080048016.01 | MsG0480021207.01 | 0.835180 | 1.949726e-56 | 2.365778e-53 |
| MsG0080048016.01 | MsG0480021294.01 | 0.805974 | 1.030236e-49 | 5.526163e-47 |
| MsG0080048016.01 | MsG0480021564.01 | 0.801215 | 1.000271e-48 | 4.750130e-46 |
| MsG0080048016.01 | MsG0480021737.01 | 0.804932 | 1.703409e-49 | 8.896127e-47 |
| MsG0080048016.01 | MsG0480021739.01 | 0.808180 | 3.515735e-50 | 1.996718e-47 |
| MsG0080048016.01 | MsG0480022155.01 | 0.819144 | 1.354853e-52 | 1.034067e-49 |
| MsG0080048016.01 | MsG0480022239.01 | 0.846959 | 1.564583e-59 | 2.738619e-56 |
| MsG0080048016.01 | MsG0480022245.01 | 0.803315 | 3.696158e-49 | 1.851484e-46 |
| MsG0080048016.01 | MsG0480022248.01 | 0.838220 | 3.272466e-57 | 4.353704e-54 |
| MsG0080048016.01 | MsG0480022401.01 | 0.800071 | 1.711404e-48 | 7.894939e-46 |
| MsG0080048016.01 | MsG0480022537.01 | 0.824617 | 7.323856e-54 | 6.521682e-51 |
| MsG0080048016.01 | MsG0480022624.01 | 0.850593 | 1.535917e-60 | 3.023787e-57 |
| MsG0080048016.01 | MsG0480022918.01 | 0.835238 | 1.884464e-56 | 2.290851e-53 |
| MsG0080048016.01 | MsG0480023381.01 | 0.817285 | 3.570601e-52 | 2.589316e-49 |
| MsG0080048016.01 | MsG0480023384.01 | 0.827396 | 1.600738e-54 | 1.543686e-51 |
| MsG0080048016.01 | MsG0480023578.01 | 0.807142 | 5.840418e-50 | 3.227980e-47 |
| MsG0080048016.01 | MsG0480023638.01 | 0.811681 | 6.199385e-51 | 3.861862e-48 |
| MsG0080048016.01 | MsG0480023641.01 | 0.856053 | 4.172210e-62 | 9.831110e-59 |
| MsG0080048016.01 | MsG0580024717.01 | 0.814655 | 1.379198e-51 | 9.308651e-49 |
| MsG0080048016.01 | MsG0580024775.01 | 0.841919 | 3.547381e-58 | 5.291153e-55 |
| MsG0080048016.01 | MsG0580024829.01 | 0.834062 | 3.724109e-56 | 4.369844e-53 |
| MsG0080048016.01 | MsG0580024862.01 | 0.825292 | 5.075898e-54 | 4.607536e-51 |
| MsG0080048016.01 | MsG0580024873.01 | 0.812125 | 4.961914e-51 | 3.128337e-48 |
| MsG0080048016.01 | MsG0580025625.01 | 0.800984 | 1.115309e-48 | 5.265958e-46 |
| MsG0080048016.01 | MsG0580025906.01 | 0.801331 | 9.471110e-49 | 4.510826e-46 |
| MsG0080048016.01 | MsG0580026032.01 | 0.813711 | 2.228771e-51 | 1.466369e-48 |
| MsG0080048016.01 | MsG0580028024.01 | 0.848118 | 7.515012e-60 | 1.364702e-56 |
| MsG0080048016.01 | MsG0580028033.01 | 0.810139 | 1.336941e-50 | 7.995850e-48 |
| MsG0080048016.01 | MsG0580028316.01 | 0.820240 | 7.613936e-53 | 5.991449e-50 |
| MsG0080048016.01 | MsG0580029879.01 | 0.840393 | 8.935086e-58 | 1.271004e-54 |
| MsG0080048016.01 | MsG0580029912.01 | 0.878762 | 2.159633e-69 | 1.141245e-65 |
| MsG0080048016.01 | MsG0580029914.01 | 0.818276 | 2.132757e-52 | 1.589261e-49 |
| MsG0080048016.01 | MsG0680030464.01 | 0.843621 | 1.252146e-58 | 1.970589e-55 |
| MsG0080048016.01 | MsG0680030515.01 | 0.814443 | 1.536746e-51 | 1.031297e-48 |
| MsG0080048016.01 | MsG0680030549.01 | 0.803607 | 3.215195e-49 | 1.622786e-46 |
| MsG0080048016.01 | MsG0680030555.01 | 0.813774 | 2.158448e-51 | 1.422436e-48 |
| MsG0080048016.01 | MsG0680031056.01 | 0.814041 | 1.885132e-51 | 1.251383e-48 |
| MsG0080048016.01 | MsG0680031815.01 | 0.801661 | 8.104944e-49 | 3.892377e-46 |
| MsG0080048016.01 | MsG0680032006.01 | 0.845350 | 4.290099e-59 | 7.129235e-56 |
| MsG0080048016.01 | MsG0680032254.01 | 0.801284 | 9.682070e-49 | 4.605930e-46 |
| MsG0080048016.01 | MsG0680032830.01 | 0.816904 | 4.346681e-52 | 3.119553e-49 |
| MsG0080048016.01 | MsG0680034064.01 | 0.805010 | 1.640778e-49 | 8.585596e-47 |
| MsG0080048016.01 | MsG0680034235.01 | 0.865418 | 5.990561e-65 | 1.947488e-61 |
| MsG0080048016.01 | MsG0680035307.01 | 0.808341 | 3.248925e-50 | 1.852995e-47 |
| MsG0080048016.01 | MsG0780036117.01 | 0.837000 | 6.727635e-57 | 8.623212e-54 |
| MsG0080048016.01 | MsG0780036263.01 | 0.824847 | 6.464301e-54 | 5.794084e-51 |
| MsG0080048016.01 | MsG0780036567.01 | 0.802622 | 5.141620e-49 | 2.530424e-46 |
| MsG0080048016.01 | MsG0780036803.01 | 0.815969 | 7.038357e-52 | 4.923784e-49 |
| MsG0080048016.01 | MsG0780037330.01 | 0.858743 | 6.681961e-63 | 1.722965e-59 |
| MsG0080048016.01 | MsG0780037331.01 | 0.805871 | 1.082788e-49 | 5.792798e-47 |
| MsG0080048016.01 | MsG0780037399.01 | 0.873210 | 1.754238e-67 | 7.551078e-64 |
| MsG0080048016.01 | MsG0780037701.01 | 0.888349 | 6.387664e-73 | 4.931196e-69 |
| MsG0080048016.01 | MsG0780037946.01 | 0.831263 | 1.843207e-55 | 1.989668e-52 |
| MsG0080048016.01 | MsG0780039711.01 | 0.807117 | 5.912582e-50 | 3.265712e-47 |
| MsG0080048016.01 | MsG0780039964.01 | 0.850305 | 1.849989e-60 | 3.608176e-57 |
| MsG0080048016.01 | MsG0780039994.01 | 0.821987 | 3.013927e-53 | 2.490316e-50 |
| MsG0080048016.01 | MsG0780040444.01 | 0.803520 | 3.351779e-49 | 1.687969e-46 |
| MsG0080048016.01 | MsG0780040794.01 | 0.803108 | 4.080215e-49 | 2.032999e-46 |
| MsG0080048016.01 | MsG0780041091.01 | 0.800297 | 1.539903e-48 | 7.144788e-46 |
| MsG0080048016.01 | MsG0780041159.01 | 0.806779 | 6.968949e-50 | 3.815703e-47 |
| MsG0080048016.01 | MsG0780041729.01 | -0.824670 | 7.118616e-54 | 6.348510e-51 |
| MsG0080048016.01 | MsG0880042000.01 | 0.809791 | 1.588867e-50 | 9.416862e-48 |
| MsG0080048016.01 | MsG0880042022.01 | 0.819932 | 8.955929e-53 | 6.987883e-50 |
| MsG0080048016.01 | MsG0880042622.01 | 0.816898 | 4.361890e-52 | 3.129880e-49 |
| MsG0080048016.01 | MsG0880042987.01 | -0.811034 | 8.568024e-51 | 5.247614e-48 |
| MsG0080048016.01 | MsG0880043014.01 | 0.819557 | 1.090923e-52 | 8.423044e-50 |
| MsG0080048016.01 | MsG0880043885.01 | 0.806163 | 9.401429e-50 | 5.067324e-47 |
| MsG0080048016.01 | MsG0880044105.01 | 0.800935 | 1.140991e-48 | 5.380389e-46 |
| MsG0080048016.01 | MsG0880044224.01 | -0.850350 | 1.797338e-60 | 3.510392e-57 |
| MsG0080048016.01 | MsG0880044524.01 | 0.822958 | 1.793190e-53 | 1.523231e-50 |
| MsG0080048016.01 | MsG0880044564.01 | 0.804443 | 2.154485e-49 | 1.110987e-46 |
| MsG0080048016.01 | MsG0880045044.01 | 0.822539 | 2.244493e-53 | 1.884144e-50 |
| MsG0080048016.01 | MsG0880047152.01 | 0.876202 | 1.684575e-68 | 8.095435e-65 |
| MsG0080048016.01 | MsG0880047266.01 | 0.812561 | 3.984387e-51 | 2.541611e-48 |
| MsG0080048016.01 | MsG0880047267.01 | 0.810982 | 8.791583e-51 | 5.377579e-48 |
| MsG0080048016.01 | MsG0880047519.01 | 0.841398 | 4.868842e-58 | 7.145606e-55 |
| MsG0080048016.01 | MsG0880047614.01 | 0.803589 | 3.243611e-49 | 1.636399e-46 |
| MsG0080048016.01 | MsG0880047703.01 | 0.804515 | 2.081886e-49 | 1.075501e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048016.01.T01 | MTR_7g069610 | 94.059 | 202 | 12 | 0 | 1 | 202 | 1 | 202 | 8.68e-140 | 390 |
| MsG0080048016.01.T01 | MTR_4g017810 | 57.353 | 204 | 67 | 3 | 1 | 202 | 1 | 186 | 1.61e-67 | 207 |
| MsG0080048016.01.T01 | MTR_0086s0010 | 42.079 | 202 | 114 | 2 | 3 | 202 | 18 | 218 | 3.63e-44 | 151 |
| MsG0080048016.01.T01 | MTR_1g101440 | 40.394 | 203 | 120 | 1 | 1 | 202 | 4 | 206 | 5.64e-44 | 150 |
| MsG0080048016.01.T01 | MTR_2g018860 | 37.222 | 180 | 111 | 2 | 19 | 198 | 30 | 207 | 1.43e-36 | 128 |
| MsG0080048016.01.T01 | MTR_4g102740 | 41.579 | 190 | 108 | 2 | 13 | 202 | 28 | 214 | 3.01e-36 | 129 |
| MsG0080048016.01.T01 | MTR_2g032910 | 96.226 | 53 | 2 | 0 | 132 | 184 | 1 | 53 | 4.51e-29 | 103 |
| MsG0080048016.01.T01 | MTR_6g022040 | 44.068 | 118 | 58 | 2 | 10 | 123 | 23 | 136 | 5.04e-24 | 93.6 |
| MsG0080048016.01.T01 | MTR_6g022020 | 45.370 | 108 | 56 | 1 | 16 | 123 | 35 | 139 | 6.60e-24 | 93.2 |
| MsG0080048016.01.T01 | MTR_2g018860 | 38.462 | 130 | 80 | 0 | 69 | 198 | 36 | 165 | 1.24e-23 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048016.01.T01 | AT3G51780 | 45.283 | 212 | 90 | 5 | 19 | 213 | 10 | 212 | 4.74e-50 | 164 |
| MsG0080048016.01.T01 | AT5G07220 | 38.916 | 203 | 119 | 3 | 1 | 202 | 4 | 202 | 4.21e-37 | 131 |
| MsG0080048016.01.T01 | AT5G52060 | 40.761 | 184 | 107 | 1 | 21 | 202 | 41 | 224 | 1.46e-36 | 131 |
| MsG0080048016.01.T01 | AT5G62100 | 35.204 | 196 | 121 | 3 | 10 | 203 | 6 | 197 | 2.34e-34 | 122 |
| MsG0080048016.01.T01 | AT5G62100 | 34.872 | 195 | 121 | 3 | 10 | 202 | 6 | 196 | 1.27e-33 | 120 |
| MsG0080048016.01.T01 | AT5G62100 | 34.694 | 196 | 124 | 2 | 16 | 211 | 12 | 203 | 5.21e-32 | 118 |
| MsG0080048016.01.T01 | AT5G62100 | 35.484 | 186 | 118 | 1 | 16 | 201 | 12 | 195 | 6.75e-32 | 117 |
| MsG0080048016.01.T01 | AT5G62100 | 35.616 | 146 | 88 | 3 | 10 | 153 | 6 | 147 | 5.54e-23 | 90.9 |
| MsG0080048016.01.T01 | AT5G62100 | 35.616 | 146 | 88 | 3 | 10 | 153 | 6 | 147 | 5.54e-23 | 90.9 |
| MsG0080048016.01.T01 | AT5G14360 | 46.602 | 103 | 47 | 2 | 17 | 117 | 46 | 142 | 6.63e-22 | 88.6 |
| MsG0080048016.01.T01 | AT5G40630 | 40.952 | 105 | 58 | 3 | 14 | 117 | 51 | 152 | 1.62e-18 | 79.7 |
Find 53 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCAAATACTCTTCTTTAA+AGG | 0.201663 | contig171end:-3015 | MsG0080048016.01.T01:CDS |
| AAAAGCTGAGGTAATGTTTA+TGG | 0.261142 | contig171end:-2566 | MsG0080048016.01.T01:CDS |
| AAGAAGAGTATTTGCTGTTC+AGG | 0.301501 | contig171end:+3021 | None:intergenic |
| GAAATCAAAACGCGAGTAAT+TGG | 0.308015 | contig171end:+5318 | None:intergenic |
| GCTGGAGCTGGATGGTATTA+AGG | 0.331947 | contig171end:-2614 | MsG0080048016.01.T01:CDS |
| AACACCGCCGCTTATTCTTC+CGG | 0.374973 | contig171end:-5279 | MsG0080048016.01.T01:CDS |
| TTCGTACAGACACGCGAATC+AGG | 0.397002 | contig171end:-5201 | MsG0080048016.01.T01:CDS |
| GCCTTGGATGTGGCTGTCAA+TGG | 0.409273 | contig171end:-2697 | MsG0080048016.01.T01:CDS |
| GTTGCTTATGAGGAAATTGC+TGG | 0.415619 | contig171end:-2632 | MsG0080048016.01.T01:CDS |
| AAATTCTTTGTCAGAAACCT+TGG | 0.460069 | contig171end:+2669 | None:intergenic |
| CGGTGTCTCGCCGCCGAATG+AGG | 0.463239 | contig171end:-5259 | MsG0080048016.01.T01:CDS |
| TTACTACAGAGTTGCTTATG+AGG | 0.464936 | contig171end:-2642 | MsG0080048016.01.T01:CDS |
| GCAGGTGTTGGCCTTGGATG+TGG | 0.469671 | contig171end:-2707 | MsG0080048016.01.T01:intron |
| CATTCGATATCCGCCTCATT+CGG | 0.471255 | contig171end:+5246 | None:intergenic |
| CTTCTTTAAAGGAAAAGAAA+AGG | 0.482417 | contig171end:-3004 | MsG0080048016.01.T01:CDS |
| ATCGAATGGGAGATGCGTCC+CGG | 0.483739 | contig171end:-5231 | MsG0080048016.01.T01:CDS |
| GAAGAGAGTCTCACAGAAAG+AGG | 0.485676 | contig171end:+5092 | None:intergenic |
| CTCATTCGGCGGCGAGACAC+CGG | 0.488256 | contig171end:+5260 | None:intergenic |
| GAATAAGCGGCGGTGTTCAT+CGG | 0.491708 | contig171end:+5285 | None:intergenic |
| TATGAGGAAATTGCTGGAGC+TGG | 0.493825 | contig171end:-2626 | MsG0080048016.01.T01:CDS |
| TTGGATGTGGCTGTCAATGG+AGG | 0.496098 | contig171end:-2694 | MsG0080048016.01.T01:CDS |
| TTTCAAGCTGTTGCTGTAGT+CGG | 0.509391 | contig171end:-2856 | MsG0080048016.01.T01:CDS |
| AGGTGGACAAGCTTTGTGAC+AGG | 0.514120 | contig171end:-2828 | MsG0080048016.01.T01:CDS |
| AAGTATGAGATGACGAGAGG+AGG | 0.532726 | contig171end:-5395 | MsG0080048016.01.T01:five_prime_UTR |
| ATCAATATCAGTGTTGCGTA+TGG | 0.535248 | contig171end:-5150 | MsG0080048016.01.T01:CDS |
| TCACAGAAAGAGGATTGAGC+TGG | 0.549543 | contig171end:+5102 | None:intergenic |
| CGAATGAGGCGGATATCGAA+TGG | 0.551079 | contig171end:-5245 | MsG0080048016.01.T01:CDS |
| GAAGAGAATTTGCACATGGA+AGG | 0.561882 | contig171end:-2976 | MsG0080048016.01.T01:CDS |
| GATATTGATCATCGGTCCAT+CGG | 0.567639 | contig171end:+5164 | None:intergenic |
| GAATGAGGCGGATATCGAAT+GGG | 0.572222 | contig171end:-5244 | MsG0080048016.01.T01:CDS |
| GTCTGTACGAACATACCGCC+GGG | 0.573976 | contig171end:+5213 | None:intergenic |
| TGCTGTAGTCGGATCAGAGG+TGG | 0.577219 | contig171end:-2845 | MsG0080048016.01.T01:CDS |
| GAATTTGCACATGGAAGGTG+TGG | 0.586370 | contig171end:-2971 | MsG0080048016.01.T01:CDS |
| TCGATATCCGCCTCATTCGG+CGG | 0.587767 | contig171end:+5249 | None:intergenic |
| TGTCTCGCCGCCGAATGAGG+CGG | 0.594723 | contig171end:-5256 | MsG0080048016.01.T01:CDS |
| GGTGGACAAGCTTTGTGACA+GGG | 0.600958 | contig171end:-2827 | MsG0080048016.01.T01:intron |
| TGGATGTGGCTGTCAATGGA+GGG | 0.601202 | contig171end:-2693 | MsG0080048016.01.T01:CDS |
| CTGGATGGTATTAAGGCTGA+AGG | 0.605506 | contig171end:-2607 | MsG0080048016.01.T01:CDS |
| CGAGACACCGGAAGAATAAG+CGG | 0.607254 | contig171end:+5272 | None:intergenic |
| GGCTGTCAATGGAGGGACCA+AGG | 0.612660 | contig171end:-2686 | MsG0080048016.01.T01:CDS |
| AGGAAATTGCTGGAGCTGGA+TGG | 0.613422 | contig171end:-2622 | MsG0080048016.01.T01:CDS |
| TTTGCACATGGAAGGTGTGG+AGG | 0.613848 | contig171end:-2968 | MsG0080048016.01.T01:CDS |
| TAGCATAGAGAGTAATCTTG+AGG | 0.621786 | contig171end:-2911 | MsG0080048016.01.T01:CDS |
| TCCATTGACAGCCACATCCA+AGG | 0.628433 | contig171end:+2696 | None:intergenic |
| TGTTGCTGTAGTCGGATCAG+AGG | 0.628867 | contig171end:-2848 | MsG0080048016.01.T01:CDS |
| TGTCTGTACGAACATACCGC+CGG | 0.633853 | contig171end:+5212 | None:intergenic |
| ACGGGGAAAGACAAGAGAAG+AGG | 0.635564 | contig171end:+5354 | None:intergenic |
| TAAGTTGCAGAGAAAAGCTG+AGG | 0.643704 | contig171end:-2578 | MsG0080048016.01.T01:CDS |
| GCAACACTGATATTGATCAT+CGG | 0.662843 | contig171end:+5156 | None:intergenic |
| GAATGAAGAGAATTTGCACA+TGG | 0.664413 | contig171end:-2980 | MsG0080048016.01.T01:CDS |
| GGTGACGATGATCATACCGA+TGG | 0.677266 | contig171end:-5180 | MsG0080048016.01.T01:CDS |
| GACACCGGAAGAATAAGCGG+CGG | 0.727415 | contig171end:+5275 | None:intergenic |
| GAATGGGAGATGCGTCCCGG+CGG | 0.755454 | contig171end:-5228 | MsG0080048016.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAATAATAATAT+GGG | + | contig171end:5159-5178 | None:intergenic | 0.0% |
| !! | TAATAATAATAATAATAATA+TGG | + | contig171end:5160-5179 | None:intergenic | 0.0% |
| !! | AAATAGGAGATATATATTTA+TGG | - | contig171end:3927-3946 | MsG0080048016.01.T01:intron | 15.0% |
| !! | ATTAAACTGTTTATCTAAAT+AGG | - | contig171end:3911-3930 | MsG0080048016.01.T01:intron | 15.0% |
| !!! | ATATTAATTTCTTTTCTTTC+AGG | - | contig171end:4229-4248 | MsG0080048016.01.T01:intron | 15.0% |
| !!! | ATTAGCTTACATAAAATTAA+AGG | + | contig171end:4344-4363 | None:intergenic | 15.0% |
| !!! | TAATTTAGTCTTTAATAACA+GGG | - | contig171end:4864-4883 | MsG0080048016.01.T01:intron | 15.0% |
| !!! | TATAACATATAATTTGCTTA+AGG | + | contig171end:4684-4703 | None:intergenic | 15.0% |
| !!! | TTAATTTAGTCTTTAATAAC+AGG | - | contig171end:4863-4882 | MsG0080048016.01.T01:intron | 15.0% |
| !!! | TTTTTATAAGCTAATTCAAT+TGG | - | contig171end:3230-3249 | MsG0080048016.01.T01:intron | 15.0% |
| !! | AACTTGTAATGACAATATTA+GGG | - | contig171end:4281-4300 | MsG0080048016.01.T01:intron | 20.0% |
| !! | AAGATTAAAATGGAGATAAA+AGG | + | contig171end:3279-3298 | None:intergenic | 20.0% |
| !! | AATAATAATATGGGAAACAT+GGG | + | contig171end:5150-5169 | None:intergenic | 20.0% |
| !! | AATACTTGTAATTAAACCTA+AGG | + | contig171end:3565-3584 | None:intergenic | 20.0% |
| !! | ATGAAGATTCAAGATTAAAA+TGG | + | contig171end:3289-3308 | None:intergenic | 20.0% |
| !! | ATTAATATACCTAACCATTT+AGG | + | contig171end:4217-4236 | None:intergenic | 20.0% |
| !! | CATTATAGAAACATAATAAC+TGG | - | contig171end:5182-5201 | MsG0080048016.01.T01:CDS | 20.0% |
| !! | TAATAATAATATGGGAAACA+TGG | + | contig171end:5151-5170 | None:intergenic | 20.0% |
| !! | TGAAATGAAGAATAATTGAT+TGG | - | contig171end:3025-3044 | MsG0080048016.01.T01:CDS | 20.0% |
| !!! | AATTTAGTCTTTAATAACAG+GGG | - | contig171end:4865-4884 | MsG0080048016.01.T01:intron | 20.0% |
| !!! | AGAAAATATTTTGTTTCCAT+TGG | - | contig171end:4827-4846 | MsG0080048016.01.T01:intron | 20.0% |
| !!! | CTTTATTTATGTATTAGTGT+AGG | - | contig171end:4562-4581 | MsG0080048016.01.T01:intron | 20.0% |
| !!! | TTACTCTATTTGTTGAAATT+GGG | - | contig171end:3971-3990 | MsG0080048016.01.T01:intron | 20.0% |
| !!! | TTATTTTCATGAGTTTATAG+CGG | - | contig171end:3206-3225 | MsG0080048016.01.T01:intron | 20.0% |
| !!! | TTTACTCTATTTGTTGAAAT+TGG | - | contig171end:3970-3989 | MsG0080048016.01.T01:intron | 20.0% |
| ! | AAATTTACTTAGTGTCTGTT+TGG | - | contig171end:3072-3091 | MsG0080048016.01.T01:intron | 25.0% |
| ! | AAGAAAGAATGATTGTTGAA+TGG | + | contig171end:4396-4415 | None:intergenic | 25.0% |
| ! | AATTCTCGATGCAAATTAAA+TGG | + | contig171end:4533-4552 | None:intergenic | 25.0% |
| ! | ACTTGTAATGACAATATTAG+GGG | - | contig171end:4282-4301 | MsG0080048016.01.T01:intron | 25.0% |
| ! | ATAGCTTATAGTTTATAAGC+TGG | - | contig171end:3122-3141 | MsG0080048016.01.T01:intron | 25.0% |
| ! | ATAGTGTATTGTGTTGAAAA+TGG | - | contig171end:4160-4179 | MsG0080048016.01.T01:intron | 25.0% |
| ! | ATCTTGATATGGAATATGTT+TGG | - | contig171end:4753-4772 | MsG0080048016.01.T01:intron | 25.0% |
| ! | CTGTTTGGCAAAAAAAATAA+TGG | + | contig171end:3495-3514 | None:intergenic | 25.0% |
| ! | GAACTTGTAATGACAATATT+AGG | - | contig171end:4280-4299 | MsG0080048016.01.T01:intron | 25.0% |
| ! | TCAGTTCGAAATTCAAATTT+CGG | + | contig171end:4469-4488 | None:intergenic | 25.0% |
| ! | TCTTGATATGGAATATGTTT+GGG | - | contig171end:4754-4773 | MsG0080048016.01.T01:intron | 25.0% |
| ! | TTCAACAGTACATATTTGTT+CGG | + | contig171end:4420-4439 | None:intergenic | 25.0% |
| !! | AGTTGATTAACTTGAAAACT+TGG | - | contig171end:4656-4675 | MsG0080048016.01.T01:intron | 25.0% |
| !! | CTTCTTTAAAGGAAAAGAAA+AGG | - | contig171end:4943-4962 | MsG0080048016.01.T01:intron | 25.0% |
| !! | GTTGATTAACTTGAAAACTT+GGG | - | contig171end:4657-4676 | MsG0080048016.01.T01:intron | 25.0% |
| !! | TACTCTATTTGTTGAAATTG+GGG | - | contig171end:3972-3991 | MsG0080048016.01.T01:intron | 25.0% |
| !! | TATTACTAGTTTAGTCACTA+AGG | + | contig171end:4611-4630 | None:intergenic | 25.0% |
| !!! | AGGTTTAAACTGTTTTTGAT+AGG | - | contig171end:4249-4268 | MsG0080048016.01.T01:intron | 25.0% |
| !!! | GTTACTGATTTTAATTTTGC+AGG | - | contig171end:5222-5241 | MsG0080048016.01.T01:CDS | 25.0% |
| !!! | GTTGTATTTTCGTTTGATTT+TGG | - | contig171end:2913-2932 | MsG0080048016.01.T01:CDS | 25.0% |
| AAAAGCTGAGGTAATGTTTA+TGG | - | contig171end:5381-5400 | MsG0080048016.01.T01:five_prime_UTR | 30.0% | |
| AAATTCTTTGTCAGAAACCT+TGG | + | contig171end:5281-5300 | None:intergenic | 30.0% | |
| AAGACATAAAATTGAGCTCA+TGG | - | contig171end:3096-3115 | MsG0080048016.01.T01:intron | 30.0% | |
| AAGCTAATACCTATTAGTGA+AGG | - | contig171end:4356-4375 | MsG0080048016.01.T01:intron | 30.0% | |
| CAGCAAATACTCTTCTTTAA+AGG | - | contig171end:4932-4951 | MsG0080048016.01.T01:intron | 30.0% | |
| CTGATTGAATTTGTAGTGTT+TGG | + | contig171end:3389-3408 | None:intergenic | 30.0% | |
| CTTGATATGGAATATGTTTG+GGG | - | contig171end:4755-4774 | MsG0080048016.01.T01:intron | 30.0% | |
| GCATCATTTGTATCTTGATA+TGG | - | contig171end:4742-4761 | MsG0080048016.01.T01:intron | 30.0% | |
| TAAGACAAAACACATACCAA+TGG | + | contig171end:4846-4865 | None:intergenic | 30.0% | |
| TATTACTGTGTTACAAAGAG+TGG | - | contig171end:4502-4521 | MsG0080048016.01.T01:intron | 30.0% | |
| TCAACAGTACATATTTGTTC+GGG | + | contig171end:4419-4438 | None:intergenic | 30.0% | |
| TTCGAACTGAGTTAAACTTA+AGG | - | contig171end:4479-4498 | MsG0080048016.01.T01:intron | 30.0% | |
| !! | AATTGGTGCGTTTTGATAAA+CGG | + | contig171end:2615-2634 | None:intergenic | 30.0% |
| !! | GGATAAGAGGTTTTATATCT+CGG | - | contig171end:4070-4089 | MsG0080048016.01.T01:intron | 30.0% |
| !!! | ATTGGGGTTGATTTAGTTTT+TGG | - | contig171end:3988-4007 | MsG0080048016.01.T01:intron | 30.0% |
| !!! | GATTTTAATTTTGCAGGTGT+TGG | - | contig171end:5228-5247 | MsG0080048016.01.T01:CDS | 30.0% |
| !!! | GGTTGAGTTGATTTTTTGAA+GGG | - | contig171end:4094-4113 | MsG0080048016.01.T01:intron | 30.0% |
| !!! | TGGTTGAGTTGATTTTTTGA+AGG | - | contig171end:4093-4112 | MsG0080048016.01.T01:intron | 30.0% |
| AACCATTTAACCCCAAAAGT+GGG | + | contig171end:3620-3639 | None:intergenic | 35.0% | |
| AGCCTTAGTTACTTGGATTA+GGG | - | contig171end:3515-3534 | MsG0080048016.01.T01:intron | 35.0% | |
| ATCAATATCAGTGTTGCGTA+TGG | - | contig171end:2797-2816 | MsG0080048016.01.T01:intron | 35.0% | |
| CTCGATGCAAATTAAATGGA+GGG | + | contig171end:4529-4548 | None:intergenic | 35.0% | |
| GAAATCAAAACGCGAGTAAT+TGG | + | contig171end:2632-2651 | None:intergenic | 35.0% | |
| GAATGAAGAGAATTTGCACA+TGG | - | contig171end:4967-4986 | MsG0080048016.01.T01:intron | 35.0% | |
| GCAACACTGATATTGATCAT+CGG | + | contig171end:2794-2813 | None:intergenic | 35.0% | |
| GTAGTGTTTGGTAGAATTAG+CGG | + | contig171end:3377-3396 | None:intergenic | 35.0% | |
| GTGTATTGTGTTGAAAATGG+TGG | - | contig171end:4163-4182 | MsG0080048016.01.T01:intron | 35.0% | |
| TAACCATTTAACCCCAAAAG+TGG | + | contig171end:3621-3640 | None:intergenic | 35.0% | |
| TACCCTAATCCAAGTAACTA+AGG | + | contig171end:3520-3539 | None:intergenic | 35.0% | |
| TAGCATAGAGAGTAATCTTG+AGG | - | contig171end:5036-5055 | MsG0080048016.01.T01:intron | 35.0% | |
| TCCAAACTCGTCTATAATGT+CGG | + | contig171end:3650-3669 | None:intergenic | 35.0% | |
| TCGATGCAAATTAAATGGAG+GGG | + | contig171end:4528-4547 | None:intergenic | 35.0% | |
| TCTCGATGCAAATTAAATGG+AGG | + | contig171end:4530-4549 | None:intergenic | 35.0% | |
| TGAGAGATTCAATGGATAAG+AGG | - | contig171end:4057-4076 | MsG0080048016.01.T01:intron | 35.0% | |
| TGGTGAAAACATGTTGTAAG+TGG | - | contig171end:4008-4027 | MsG0080048016.01.T01:intron | 35.0% | |
| TTACTACAGAGTTGCTTATG+AGG | - | contig171end:5305-5324 | MsG0080048016.01.T01:five_prime_UTR | 35.0% | |
| ! | AAAAAGTATGAGATGACGAG+AGG | - | contig171end:2549-2568 | MsG0080048016.01.T01:CDS | 35.0% |
| ! | ATGTTGGTTGAGAGATTCAA+TGG | - | contig171end:4049-4068 | MsG0080048016.01.T01:intron | 35.0% |
| ! | CAAGTCAAAGCTTTTGCTTT+TGG | - | contig171end:5003-5022 | MsG0080048016.01.T01:intron | 35.0% |
| !! | AAGAAGAGTATTTGCTGTTC+AGG | + | contig171end:4929-4948 | None:intergenic | 35.0% |
| !! | ATTGGTGCGTTTTGATAAAC+GGG | + | contig171end:2614-2633 | None:intergenic | 35.0% |
| !! | TAAGAGGTTTTATATCTCGG+TGG | - | contig171end:4073-4092 | MsG0080048016.01.T01:intron | 35.0% |
| !!! | ATGCTGATTTTGTGGTTGAA+TGG | - | contig171end:2883-2902 | MsG0080048016.01.T01:CDS | 35.0% |
| !!! | CTGTTTTTGATAGGTGAAAG+TGG | - | contig171end:4258-4277 | MsG0080048016.01.T01:intron | 35.0% |
| !!! | TGAGTTGATTTTTTGAAGGG+TGG | - | contig171end:4097-4116 | MsG0080048016.01.T01:intron | 35.0% |
| !!! | TTCTCTCTATGCTGATTTTG+TGG | - | contig171end:2875-2894 | MsG0080048016.01.T01:CDS | 35.0% |
| ACCGACATTATAGACGAGTT+TGG | - | contig171end:3646-3665 | MsG0080048016.01.T01:intron | 40.0% | |
| CAAACAGAGCCTTAGTTACT+TGG | - | contig171end:3508-3527 | MsG0080048016.01.T01:intron | 40.0% | |
| CAAGTAACTAAGGCTCTGTT+TGG | + | contig171end:3510-3529 | None:intergenic | 40.0% | |
| CATTACACGCCTTCACTAAT+AGG | + | contig171end:4368-4387 | None:intergenic | 40.0% | |
| GAAGAGAATTTGCACATGGA+AGG | - | contig171end:4971-4990 | MsG0080048016.01.T01:intron | 40.0% | |
| GAGCCTTAGTTACTTGGATT+AGG | - | contig171end:3514-3533 | MsG0080048016.01.T01:intron | 40.0% | |
| GATATTGATCATCGGTCCAT+CGG | + | contig171end:2786-2805 | None:intergenic | 40.0% | |
| GTTGCTTATGAGGAAATTGC+TGG | - | contig171end:5315-5334 | MsG0080048016.01.T01:five_prime_UTR | 40.0% | |
| TAAGTTGCAGAGAAAAGCTG+AGG | - | contig171end:5369-5388 | MsG0080048016.01.T01:five_prime_UTR | 40.0% | |
| TGATAGAGCTGCATCCTAAA+TGG | - | contig171end:4200-4219 | MsG0080048016.01.T01:intron | 40.0% | |
| TTTCAAGCTGTTGCTGTAGT+CGG | - | contig171end:5091-5110 | MsG0080048016.01.T01:intron | 40.0% | |
| ! | AGAATGTAAGCTCCCACTTT+TGG | - | contig171end:3605-3624 | MsG0080048016.01.T01:intron | 40.0% |
| ! | GCTGATAAGCTAGCTTATAG+CGG | + | contig171end:3469-3488 | None:intergenic | 40.0% |
| ! | TTGGATTAGGGTAATGACGA+GGG | - | contig171end:3527-3546 | MsG0080048016.01.T01:intron | 40.0% |
| !! | AATGTAAGCTCCCACTTTTG+GGG | - | contig171end:3607-3626 | MsG0080048016.01.T01:intron | 40.0% |
| !! | CATCTTGTGTGAGTTGATGT+TGG | - | contig171end:4033-4052 | MsG0080048016.01.T01:intron | 40.0% |
| !! | GAATGTAAGCTCCCACTTTT+GGG | - | contig171end:3606-3625 | MsG0080048016.01.T01:intron | 40.0% |
| !! | GTCAAAGCTTTTGCTTTTGG+AGG | - | contig171end:5006-5025 | MsG0080048016.01.T01:intron | 40.0% |
| !! | TTAAAGGACTTAGCTTGCTC+AGG | + | contig171end:4328-4347 | None:intergenic | 40.0% |
| !! | TTGGTGCGTTTTGATAAACG+GGG | + | contig171end:2613-2632 | None:intergenic | 40.0% |
| AAATGACGCAAAGACGCGTT+TGG | - | contig171end:3154-3173 | MsG0080048016.01.T01:intron | 45.0% | |
| AACTGAAAAACAGCAGCGCA+TGG | + | contig171end:3758-3777 | None:intergenic | 45.0% | |
| AAGTATGAGATGACGAGAGG+AGG | - | contig171end:2552-2571 | MsG0080048016.01.T01:CDS | 45.0% | |
| AGGGGATTGGATATTGCCTT+AGG | - | contig171end:3546-3565 | MsG0080048016.01.T01:intron | 45.0% | |
| CATTCGATATCCGCCTCATT+CGG | + | contig171end:2704-2723 | None:intergenic | 45.0% | |
| CTGGATGGTATTAAGGCTGA+AGG | - | contig171end:5340-5359 | MsG0080048016.01.T01:five_prime_UTR | 45.0% | |
| GAAGAGAGTCTCACAGAAAG+AGG | + | contig171end:2858-2877 | None:intergenic | 45.0% | |
| GAATGAGGCGGATATCGAAT+GGG | - | contig171end:2703-2722 | MsG0080048016.01.T01:CDS | 45.0% | |
| GAATTTGCACATGGAAGGTG+TGG | - | contig171end:4976-4995 | MsG0080048016.01.T01:intron | 45.0% | |
| GAGCTGCATCCTAAATGGTT+AGG | - | contig171end:4205-4224 | MsG0080048016.01.T01:intron | 45.0% | |
| TATGAGGAAATTGCTGGAGC+TGG | - | contig171end:5321-5340 | MsG0080048016.01.T01:five_prime_UTR | 45.0% | |
| TCACAGAAAGAGGATTGAGC+TGG | + | contig171end:2848-2867 | None:intergenic | 45.0% | |
| TGATTGTCAGAGAGAGCTTC+TGG | - | contig171end:3714-3733 | MsG0080048016.01.T01:intron | 45.0% | |
| ! | CTTGGATTAGGGTAATGACG+AGG | - | contig171end:3526-3545 | MsG0080048016.01.T01:intron | 45.0% |
| ! | TGGATTAGGGTAATGACGAG+GGG | - | contig171end:3528-3547 | MsG0080048016.01.T01:intron | 45.0% |
| !!! | AATTTTGCAGGTGTTGGCCT+TGG | - | contig171end:5234-5253 | MsG0080048016.01.T01:CDS | 45.0% |
| !!! | CTCCCACTTTTGGGGTTAAA+TGG | - | contig171end:3615-3634 | MsG0080048016.01.T01:intron | 45.0% |
| AACACCGCCGCTTATTCTTC+CGG | - | contig171end:2668-2687 | MsG0080048016.01.T01:CDS | 50.0% | |
| ACGGGGAAAGACAAGAGAAG+AGG | + | contig171end:2596-2615 | None:intergenic | 50.0% | |
| AGGAAATTGCTGGAGCTGGA+TGG | - | contig171end:5325-5344 | MsG0080048016.01.T01:five_prime_UTR | 50.0% | |
| CGAATGAGGCGGATATCGAA+TGG | - | contig171end:2702-2721 | MsG0080048016.01.T01:CDS | 50.0% | |
| CGAGACACCGGAAGAATAAG+CGG | + | contig171end:2678-2697 | None:intergenic | 50.0% | |
| GAATAAGCGGCGGTGTTCAT+CGG | + | contig171end:2665-2684 | None:intergenic | 50.0% | |
| GCTGGAGCTGGATGGTATTA+AGG | - | contig171end:5333-5352 | MsG0080048016.01.T01:five_prime_UTR | 50.0% | |
| GGTGACGATGATCATACCGA+TGG | - | contig171end:2767-2786 | MsG0080048016.01.T01:intron | 50.0% | |
| TAGGGTAATGACGAGGGGAT+TGG | - | contig171end:3533-3552 | MsG0080048016.01.T01:intron | 50.0% | |
| TCCATTGACAGCCACATCCA+AGG | + | contig171end:5254-5273 | None:intergenic | 50.0% | |
| TGAAAAACAGCAGCGCATGG+AGG | + | contig171end:3755-3774 | None:intergenic | 50.0% | |
| TGGATGTGGCTGTCAATGGA+GGG | - | contig171end:5254-5273 | MsG0080048016.01.T01:CDS | 50.0% | |
| TGTCTGTACGAACATACCGC+CGG | + | contig171end:2738-2757 | None:intergenic | 50.0% | |
| TGTTGCTGTAGTCGGATCAG+AGG | - | contig171end:5099-5118 | MsG0080048016.01.T01:intron | 50.0% | |
| TTCGTACAGACACGCGAATC+AGG | - | contig171end:2746-2765 | MsG0080048016.01.T01:intron | 50.0% | |
| TTGGATGTGGCTGTCAATGG+AGG | - | contig171end:5253-5272 | MsG0080048016.01.T01:CDS | 50.0% | |
| ! | AGGTGGACAAGCTTTGTGAC+AGG | - | contig171end:5119-5138 | MsG0080048016.01.T01:CDS | 50.0% |
| ! | GGTGGACAAGCTTTGTGACA+GGG | - | contig171end:5120-5139 | MsG0080048016.01.T01:CDS | 50.0% |
| ! | TTTGCACATGGAAGGTGTGG+AGG | - | contig171end:4979-4998 | MsG0080048016.01.T01:intron | 50.0% |
| ATCGAATGGGAGATGCGTCC+CGG | - | contig171end:2716-2735 | MsG0080048016.01.T01:intron | 55.0% | |
| GACACCGGAAGAATAAGCGG+CGG | + | contig171end:2675-2694 | None:intergenic | 55.0% | |
| GCCTTGGATGTGGCTGTCAA+TGG | - | contig171end:5250-5269 | MsG0080048016.01.T01:CDS | 55.0% | |
| GTCTGTACGAACATACCGCC+GGG | + | contig171end:2737-2756 | None:intergenic | 55.0% | |
| TCGATATCCGCCTCATTCGG+CGG | + | contig171end:2701-2720 | None:intergenic | 55.0% | |
| TGCTGTAGTCGGATCAGAGG+TGG | - | contig171end:5102-5121 | MsG0080048016.01.T01:intron | 55.0% | |
| GGCTGTCAATGGAGGGACCA+AGG | - | contig171end:5261-5280 | MsG0080048016.01.T01:CDS | 60.0% | |
| !! | GCAGGTGTTGGCCTTGGATG+TGG | - | contig171end:5240-5259 | MsG0080048016.01.T01:CDS | 60.0% |
| CTCATTCGGCGGCGAGACAC+CGG | + | contig171end:2690-2709 | None:intergenic | 65.0% | |
| GAATGGGAGATGCGTCCCGG+CGG | - | contig171end:2719-2738 | MsG0080048016.01.T01:intron | 65.0% | |
| TGTCTCGCCGCCGAATGAGG+CGG | - | contig171end:2691-2710 | MsG0080048016.01.T01:CDS | 65.0% | |
| CGGTGTCTCGCCGCCGAATG+AGG | - | contig171end:2688-2707 | MsG0080048016.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig171end | gene | 2537 | 5432 | 2537 | ID=MsG0080048016.01;Name=MsG0080048016.01 |
| contig171end | mRNA | 2537 | 5432 | 2537 | ID=MsG0080048016.01.T01;Parent=MsG0080048016.01;Name=MsG0080048016.01.T01;_AED=0.42;_eAED=0.42;_QI=128|1|0.66|1|1|1|3|0|214 |
| contig171end | exon | 5106 | 5432 | 5106 | ID=MsG0080048016.01.T01:exon:7638;Parent=MsG0080048016.01.T01 |
| contig171end | exon | 2828 | 3084 | 2828 | ID=MsG0080048016.01.T01:exon:7639;Parent=MsG0080048016.01.T01 |
| contig171end | exon | 2537 | 2725 | 2537 | ID=MsG0080048016.01.T01:exon:7640;Parent=MsG0080048016.01.T01 |
| contig171end | five_prime_UTR | 5305 | 5432 | 5305 | ID=MsG0080048016.01.T01:five_prime_utr;Parent=MsG0080048016.01.T01 |
| contig171end | CDS | 5106 | 5304 | 5106 | ID=MsG0080048016.01.T01:cds;Parent=MsG0080048016.01.T01 |
| contig171end | CDS | 2828 | 3084 | 2828 | ID=MsG0080048016.01.T01:cds;Parent=MsG0080048016.01.T01 |
| contig171end | CDS | 2537 | 2725 | 2537 | ID=MsG0080048016.01.T01:cds;Parent=MsG0080048016.01.T01 |
| Gene Sequence |
| Protein sequence |
