AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011287.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011287.01.T01 MTR_2g101560 80.208 192 4 2 189 346 430 621 4.61e-92 292
MsG0280011287.01.T01 MTR_2g101560 77.778 180 33 2 1 176 1 177 3.86e-76 250
MsG0280011287.01.T01 MTR_2g101610 61.215 214 70 3 1 204 1 211 1.94e-73 243
MsG0280011287.01.T01 MTR_2g101610 63.874 191 36 1 189 346 430 620 1.88e-72 241
MsG0280011287.01.T01 MTR_2g101590 63.874 191 36 1 189 346 429 619 2.60e-72 240
MsG0280011287.01.T01 MTR_2g101590 67.582 182 51 3 1 178 1 178 4.58e-70 234
MsG0280011287.01.T01 MTR_2g101640 64.398 191 30 2 189 346 426 611 1.86e-70 235
MsG0280011287.01.T01 MTR_2g101640 63.187 182 56 4 1 178 1 175 2.89e-63 216
MsG0280011287.01.T01 MTR_4g011280 50.794 189 77 6 1 178 1 184 1.50e-46 170
MsG0280011287.01.T01 MTR_4g011280 50.920 163 45 2 189 318 433 593 2.64e-41 155
MsG0280011287.01.T01 MTR_2g101650 48.108 185 81 6 1 178 1 177 6.43e-44 163
MsG0280011287.01.T01 MTR_2g101650 48.438 128 62 1 174 301 412 535 2.55e-30 124
MsG0280011287.01.T01 MTR_1g057460 52.486 181 66 5 1 178 24 187 1.51e-42 159
MsG0280011287.01.T01 MTR_1g057460 58.594 128 41 2 174 301 421 536 3.92e-37 144
MsG0280011287.01.T01 MTR_1g057460 58.594 128 41 2 174 301 350 465 2.06e-37 143
MsG0280011287.01.T01 MTR_1g057460 48.031 127 52 3 55 178 1 116 3.80e-22 99.4
MsG0280011287.01.T01 MTR_0236s0050 56.250 128 44 2 174 301 350 465 3.75e-35 137
MsG0280011287.01.T01 MTR_0236s0050 46.875 128 52 4 55 178 1 116 1.19e-21 97.8
MsG0280011287.01.T01 MTR_1g009200 41.111 180 93 5 5 175 1 176 6.41e-28 117
MsG0280011287.01.T01 MTR_1g009200 42.708 96 55 0 195 290 434 529 1.03e-17 86.3
MsG0280011287.01.T01 MTR_8g103233 45.299 117 64 0 174 290 402 518 4.70e-27 114
MsG0280011287.01.T01 MTR_8g103233 39.881 168 92 4 16 178 6 169 2.66e-25 109
MsG0280011287.01.T01 MTR_1g026740 36.139 202 113 6 14 207 7 200 7.42e-26 110
MsG0280011287.01.T01 MTR_1g026740 50.000 100 50 0 192 291 420 519 1.42e-23 103
MsG0280011287.01.T01 MTR_1g026770 50.000 106 53 0 186 291 411 516 2.94e-25 108
MsG0280011287.01.T01 MTR_1g026770 35.323 201 114 6 15 207 6 198 1.84e-18 88.6
MsG0280011287.01.T01 MTR_1g026750 52.000 100 48 0 192 291 421 520 9.11e-25 107
MsG0280011287.01.T01 MTR_1g026750 38.647 207 109 7 11 207 3 201 1.01e-19 92.4
MsG0280011287.01.T01 MTR_4g107580 33.939 165 106 3 9 171 7 170 9.05e-21 95.5
MsG0280011287.01.T01 MTR_4g107580 37.500 104 63 1 189 290 432 535 1.42e-13 73.2
MsG0280011287.01.T01 MTR_5g055000 35.882 170 94 5 25 186 16 178 6.64e-20 92.8
MsG0280011287.01.T01 MTR_5g055000 29.524 105 74 0 186 290 417 521 3.88e-12 68.9
MsG0280011287.01.T01 MTR_5g038060 34.545 165 97 4 15 171 19 180 8.42e-20 92.8
MsG0280011287.01.T01 MTR_5g038060 36.752 117 69 2 175 290 427 539 7.20e-14 74.3
MsG0280011287.01.T01 MTR_4g107510 31.138 167 113 2 11 175 20 186 1.23e-17 85.9
MsG0280011287.01.T01 MTR_4g107510 38.136 118 71 1 175 290 429 546 2.68e-16 82.0
MsG0280011287.01.T01 MTR_7g088820 31.285 179 118 4 10 185 8 184 3.97e-17 84.3
MsG0280011287.01.T01 MTR_7g088825 33.140 172 110 4 17 185 12 181 4.74e-17 84.3
MsG0280011287.01.T01 MTR_3g112450 32.584 178 106 4 5 174 1 172 6.80e-17 83.6
MsG0280011287.01.T01 MTR_7g064800 31.443 194 113 8 25 204 24 211 7.62e-16 80.5
MsG0280011287.01.T01 MTR_5g038190 31.548 168 101 6 14 171 10 173 4.19e-15 78.2
MsG0280011287.01.T01 MTR_3g112470 33.548 155 93 4 25 174 21 170 8.57e-15 77.0
MsG0280011287.01.T01 MTR_4g107610 32.298 161 106 3 14 171 18 178 2.22e-14 75.9
MsG0280011287.01.T01 MTR_8g469480 32.184 174 100 6 30 189 41 210 2.45e-14 75.9
MsG0280011287.01.T01 MTR_8g469480 36.538 104 63 1 187 290 446 546 1.95e-12 69.7
MsG0280011287.01.T01 MTR_4g107530 38.136 118 71 2 175 290 426 543 3.90e-14 75.1
MsG0280011287.01.T01 MTR_4g107530 28.916 166 110 4 14 171 15 180 3.62e-12 68.9
MsG0280011287.01.T01 MTR_5g012270 27.746 173 110 6 25 186 26 194 7.86e-14 73.9
MsG0280011287.01.T01 MTR_3g112460 33.548 155 93 4 25 174 21 170 8.83e-14 73.9
MsG0280011287.01.T01 MTR_4g033385 31.034 116 80 0 175 290 299 414 2.10e-13 72.4
MsG0280011287.01.T01 MTR_8g469470 35.294 102 63 1 189 290 445 543 2.34e-13 72.8
MsG0280011287.01.T01 MTR_8g469470 28.824 170 104 6 14 171 17 181 2.61e-13 72.4
MsG0280011287.01.T01 MTR_7g005930 28.902 173 121 2 10 180 18 190 4.15e-13 72.0
MsG0280011287.01.T01 MTR_4g033325 31.034 116 80 0 175 290 272 387 5.40e-13 70.9
MsG0280011287.01.T01 MTR_4g033325 31.034 116 80 0 175 290 298 413 5.47e-13 71.2
MsG0280011287.01.T01 MTR_3g005010 34.615 104 68 0 187 290 402 505 8.74e-13 70.9
MsG0280011287.01.T01 MTR_4g033325 31.034 116 80 0 175 290 396 511 1.05e-12 70.5
MsG0280011287.01.T01 MTR_7g098220 29.798 198 127 7 11 196 12 209 1.07e-12 70.5
MsG0280011287.01.T01 MTR_7g098220 30.172 116 80 1 175 290 416 530 1.59e-11 67.0
MsG0280011287.01.T01 MTR_3g462710 32.800 125 76 3 168 290 298 416 1.40e-12 69.7
MsG0280011287.01.T01 MTR_1g009170 33.566 143 79 3 190 319 246 385 1.86e-12 68.9
MsG0280011287.01.T01 MTR_3g462710 32.800 125 76 3 168 290 407 525 2.06e-12 69.7
MsG0280011287.01.T01 MTR_7g064780 28.571 182 101 6 14 175 3 175 3.95e-12 68.9
MsG0280011287.01.T01 MTR_5g085850 31.081 148 97 3 29 171 32 179 4.08e-12 68.6
MsG0280011287.01.T01 MTR_1g075440 30.081 123 85 1 175 297 414 535 1.01e-11 67.4
MsG0280011287.01.T01 MTR_1g041835 29.448 163 107 4 36 190 36 198 1.04e-11 67.4
MsG0280011287.01.T01 MTR_7g098200 30.769 143 95 3 36 174 38 180 1.17e-11 67.4
MsG0280011287.01.T01 MTR_7g098200 30.769 143 95 3 36 174 38 180 1.20e-11 67.4
MsG0280011287.01.T01 MTR_7g088790 29.885 174 117 4 15 185 17 188 1.31e-11 67.0
MsG0280011287.01.T01 MTR_7g088790 29.808 104 71 1 187 290 432 533 3.49e-11 65.9
MsG0280011287.01.T01 MTR_4g019580 30.000 100 70 0 188 287 430 529 1.36e-11 67.0
MsG0280011287.01.T01 MTR_4g033330 29.310 116 82 0 175 290 398 513 1.61e-11 66.6
MsG0280011287.01.T01 MTR_7g098220 30.172 116 80 1 175 290 372 486 1.78e-11 66.6
MsG0280011287.01.T01 MTR_7g098090 28.834 163 107 4 36 189 42 204 1.92e-11 66.6
MsG0280011287.01.T01 MTR_5g012290 25.397 189 119 6 11 186 14 193 2.20e-11 66.2
MsG0280011287.01.T01 MTR_7g098040 30.070 143 96 3 36 174 43 185 2.23e-11 66.6
MsG0280011287.01.T01 MTR_7g006540 35.484 124 71 3 168 287 451 569 2.78e-11 66.2
MsG0280011287.01.T01 MTR_3g072300 30.851 94 65 0 197 290 430 523 3.22e-11 65.9
MsG0280011287.01.T01 MTR_0294s0020 32.692 104 69 1 188 290 408 511 4.36e-11 65.5
MsG0280011287.01.T01 MTR_4g033310 32.000 100 68 0 191 290 350 449 4.37e-11 65.5
MsG0280011287.01.T01 MTR_4g033315 32.000 100 68 0 191 290 414 513 4.44e-11 65.5
MsG0280011287.01.T01 MTR_4g033310 32.000 100 68 0 191 290 414 513 4.44e-11 65.5
MsG0280011287.01.T01 MTR_4g015080 34.400 125 74 3 168 290 415 533 4.47e-11 65.5
MsG0280011287.01.T01 MTR_4g101380 29.375 160 97 6 25 174 24 177 4.64e-11 65.5
MsG0280011287.01.T01 MTR_1g041815 27.976 168 112 5 36 194 36 203 4.68e-11 65.5
MsG0280011287.01.T01 MTR_6g008690 32.710 107 68 1 188 290 392 498 5.21e-11 65.1
MsG0280011287.01.T01 MTR_7g067010 30.081 123 82 2 168 290 405 523 5.36e-11 65.1
MsG0280011287.01.T01 MTR_7g098150 30.612 147 90 5 36 174 42 184 6.21e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011287.01.T01 AT1G52190 40.933 193 98 5 15 194 9 198 9.75e-35 137
MsG0280011287.01.T01 AT1G52190 38.710 155 61 2 190 311 431 584 1.65e-26 113
MsG0280011287.01.T01 AT3G16180 44.000 175 88 5 11 178 6 177 1.03e-31 128
MsG0280011287.01.T01 AT3G16180 34.375 160 72 2 190 317 431 589 4.94e-23 102
MsG0280011287.01.T01 AT1G68570 36.559 186 103 5 9 186 5 183 2.90e-19 91.3
MsG0280011287.01.T01 AT1G68570 34.615 104 68 0 187 290 426 529 1.15e-14 76.6
MsG0280011287.01.T01 AT5G28470 27.419 310 203 8 20 317 10 309 1.49e-18 89.0
MsG0280011287.01.T01 AT5G28470 27.419 310 203 8 20 317 10 309 1.71e-18 88.6
MsG0280011287.01.T01 AT5G62680 35.088 171 106 5 9 175 25 194 1.48e-17 85.9
MsG0280011287.01.T01 AT5G62680 38.318 107 63 1 187 290 448 554 5.49e-14 74.7
MsG0280011287.01.T01 AT5G11570 51.136 88 36 2 195 282 357 437 1.93e-17 85.1
MsG0280011287.01.T01 AT5G11570 35.359 181 98 5 28 196 14 187 1.16e-16 82.8
MsG0280011287.01.T01 AT1G69870 38.596 114 65 2 175 288 444 552 1.74e-16 82.4
MsG0280011287.01.T01 AT1G69870 29.878 164 106 4 18 175 42 202 3.49e-15 78.6
MsG0280011287.01.T01 AT1G69860 33.974 156 95 4 25 174 16 169 3.14e-16 81.6
MsG0280011287.01.T01 AT3G47960 40.187 107 61 1 187 290 464 570 2.71e-15 79.0
MsG0280011287.01.T01 AT3G47960 33.929 168 102 5 10 175 50 210 1.05e-14 77.0
MsG0280011287.01.T01 AT2G26690 31.138 167 110 4 12 175 9 173 3.51e-15 78.6
MsG0280011287.01.T01 AT1G68570 34.615 104 68 0 187 290 396 499 1.22e-14 76.6
MsG0280011287.01.T01 AT1G18880 37.383 107 64 1 187 290 422 528 4.79e-14 74.7
MsG0280011287.01.T01 AT1G18880 30.488 164 111 3 15 175 7 170 7.86e-14 74.3
MsG0280011287.01.T01 AT5G01180 35.772 123 75 2 168 290 407 525 4.92e-14 74.7
MsG0280011287.01.T01 AT5G01180 35.772 123 75 2 168 290 407 525 4.92e-14 74.7
MsG0280011287.01.T01 AT5G01180 35.772 123 75 2 168 290 407 525 4.92e-14 74.7
MsG0280011287.01.T01 AT2G02040 33.333 177 105 6 5 174 18 188 7.17e-14 74.3
MsG0280011287.01.T01 AT2G02040 38.000 100 61 1 191 290 445 543 1.71e-11 67.0
MsG0280011287.01.T01 AT1G22540 35.345 116 75 0 175 290 399 514 7.62e-14 74.3
MsG0280011287.01.T01 AT1G62200 40.594 101 51 1 191 291 488 579 8.58e-14 73.9
MsG0280011287.01.T01 AT1G62200 40.594 101 51 1 191 291 459 550 9.84e-14 73.9
MsG0280011287.01.T01 AT1G62200 40.594 101 51 1 191 291 502 593 1.03e-13 73.9
MsG0280011287.01.T01 AT1G72140 34.483 116 76 0 175 290 399 514 1.53e-13 73.2
MsG0280011287.01.T01 AT2G26690 33.333 138 87 4 41 175 5 140 1.45e-12 70.1
MsG0280011287.01.T01 AT3G54450 27.193 114 83 0 175 288 390 503 1.62e-12 70.1
MsG0280011287.01.T01 AT5G46040 30.070 143 95 4 36 174 36 177 6.92e-12 68.2
MsG0280011287.01.T01 AT5G14940 32.520 123 77 3 186 306 397 515 8.66e-12 67.8
MsG0280011287.01.T01 AT5G13400 33.065 124 80 2 168 290 452 573 1.04e-11 67.4
MsG0280011287.01.T01 AT1G22570 33.333 105 67 1 186 290 421 522 1.13e-11 67.4
MsG0280011287.01.T01 AT1G22570 33.333 105 67 1 186 290 384 485 1.15e-11 67.4
MsG0280011287.01.T01 AT2G40460 32.979 94 63 0 197 290 424 517 1.39e-11 67.0
MsG0280011287.01.T01 AT5G46050 33.333 102 67 1 189 290 314 414 1.69e-11 66.6
MsG0280011287.01.T01 AT3G21670 27.136 199 133 5 11 197 12 210 2.28e-11 66.6
MsG0280011287.01.T01 AT1G22550 31.373 102 70 0 189 290 420 521 2.56e-11 66.2
MsG0280011287.01.T01 AT1G27080 31.034 116 71 1 175 290 362 468 2.62e-11 66.2
MsG0280011287.01.T01 AT5G46050 33.333 102 67 1 189 290 426 526 2.69e-11 66.2
MsG0280011287.01.T01 AT1G27080 31.034 116 71 1 175 290 404 510 3.29e-11 65.9
MsG0280011287.01.T01 AT3G54140 30.081 123 82 2 168 290 407 525 6.71e-11 65.1
MsG0280011287.01.T01 AT3G54140 30.081 123 82 2 168 290 407 525 6.71e-11 65.1
MsG0280011287.01.T01 AT1G12110 32.099 162 103 6 21 176 19 179 9.77e-11 64.3
MsG0280011287.01.T01 AT2G26690 34.109 129 80 4 50 175 2 128 9.88e-11 64.3

Find 118 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAAAGCTCTATTGTTAT+TGG 0.116841 2:-82006463 None:intergenic
CTTTGTAATAAAACTCATTT+TGG 0.123205 2:-82007484 None:intergenic
GCTGAGGCATTCAATGTTAT+TGG 0.226194 2:+82007461 MsG0280011287.01.T01:CDS
GCTTGCACCTTCACTTTGTT+TGG 0.290635 2:+82007430 MsG0280011287.01.T01:CDS
TAGCAATGTGGATATAAATT+AGG 0.297045 2:-82004853 None:intergenic
CAAGTAGGAGGCTGCGTCGC+TGG 0.300060 2:-82006295 None:intergenic
CAACATGATATTGTATTTGA+TGG 0.300550 2:+82005228 MsG0280011287.01.T01:CDS
ATTTCATGTTCTTTAGCATT+TGG 0.304538 2:+82006412 MsG0280011287.01.T01:CDS
TTAGTATGCAGTTGGGCTTA+TGG 0.310648 2:+82007721 MsG0280011287.01.T01:intron
GATAAGATACCAATGATAAA+AGG 0.324542 2:-82005070 None:intergenic
TGCTTGGATCTGCCACTTGT+TGG 0.331059 2:+82010626 MsG0280011287.01.T01:CDS
GCTTGGATCTGCCACTTGTT+GGG 0.334413 2:+82010627 MsG0280011287.01.T01:CDS
AAGGAGAAAGAAAGCAATTC+AGG 0.340505 2:+82007358 MsG0280011287.01.T01:CDS
AGGTTCTATTATCAGTTTCC+TGG 0.349967 2:+82005378 MsG0280011287.01.T01:CDS
GCAATCATTTGTAGCCCTTC+CGG 0.356272 2:+82011343 MsG0280011287.01.T01:CDS
GCGTTAATTCTGATAGGAAT+TGG 0.359891 2:+82006379 MsG0280011287.01.T01:CDS
TTTGCTGATATACAGCCTTC+AGG 0.359961 2:-82006328 None:intergenic
GAAACACTAGACATAGTCTT+TGG 0.360014 2:-82007512 None:intergenic
GCACCTTCACTTTGTTTGGC+TGG 0.361719 2:+82007434 MsG0280011287.01.T01:CDS
AAAAGAAGACACCAAGTTTC+CGG 0.373199 2:-82007564 None:intergenic
TCTGCCTGACTCAGCCAAGC+TGG 0.375001 2:+82010674 MsG0280011287.01.T01:CDS
AGTGTTTCTTCAGCACTCTC+TGG 0.375458 2:+82007527 MsG0280011287.01.T01:CDS
CTAACCTTGTCATCAATTTG+TGG 0.379224 2:-82007826 None:intergenic
TTCCAATAACAATAGAGCTT+TGG 0.382182 2:+82006461 MsG0280011287.01.T01:CDS
TATAAATTAGGAAAATTCTA+TGG 0.383085 2:-82004841 None:intergenic
AGACCACCCTTGCTTCTTTG+TGG 0.395960 2:-82005037 None:intergenic
TCCAAAGTGAGTGAAGAAAA+TGG 0.396852 2:+82007763 MsG0280011287.01.T01:CDS
CGATTCCTAGGTGTTGGAAT+AGG 0.398985 2:+82005358 MsG0280011287.01.T01:CDS
TTCTTCAGCACTCTCTGGAT+TGG 0.405295 2:+82007532 MsG0280011287.01.T01:CDS
TAAAAGATAGATATATATAT+AGG 0.412365 2:-82004911 None:intergenic
ATCAAATACAATATCATGTT+GGG 0.422265 2:-82005226 None:intergenic
CATCCCAGCTTGGCTGAGTC+AGG 0.422883 2:-82010678 None:intergenic
ACTTGTTGGGGTAGATCCAC+TGG 0.424440 2:+82010640 MsG0280011287.01.T01:CDS
AGGCTGCGTCGCTGGGATCA+TGG 0.429972 2:-82006287 None:intergenic
CTTTGGAAATATTCTTCACT+TGG 0.431586 2:+82006478 MsG0280011287.01.T01:CDS
TTCTATATTGGTCGATTCCT+AGG 0.447848 2:+82005346 MsG0280011287.01.T01:CDS
TGGAATCACAATTGCGTCTC+CGG 0.449417 2:-82011362 None:intergenic
ATCAGCAAAACCAGGTCAAA+TGG 0.449605 2:+82006342 MsG0280011287.01.T01:CDS
CTCTCTGCGTTAATTCTGAT+AGG 0.460782 2:+82006373 MsG0280011287.01.T01:CDS
GGCAATGGCTGCCGGAAACT+TGG 0.462855 2:+82007553 MsG0280011287.01.T01:CDS
TGCTGCTGATGAAGAAGAAA+TGG 0.464327 2:+82005000 MsG0280011287.01.T01:CDS
AAGTAGGAGGCTGCGTCGCT+GGG 0.464764 2:-82006294 None:intergenic
TGATATAGCCATTTACTTGA+CGG 0.465286 2:-82011215 None:intergenic
ACTTCAAGTGGAGGAAAAGA+TGG 0.470588 2:+82007611 MsG0280011287.01.T01:CDS
GCAATAAAAGCAGCAACAAC+AGG 0.471001 2:-82005320 None:intergenic
ATTCTGATAGGAATTGGAAA+TGG 0.478772 2:+82006385 MsG0280011287.01.T01:CDS
AATGACCACTTTCGAGGGGC+AGG 0.480998 2:-82011278 None:intergenic
GACTCAGCCAAGCTGGGATG+AGG 0.481244 2:+82010681 MsG0280011287.01.T01:CDS
TCTGGATTGGCAATGGCTGC+CGG 0.481828 2:+82007545 MsG0280011287.01.T01:CDS
TGAATTCAAGAATGGTGGTC+AGG 0.484071 2:+82007882 MsG0280011287.01.T01:CDS
AGGATGGCAAGTGCTGGACT+TGG 0.485050 2:+82005202 MsG0280011287.01.T01:CDS
CTTGCTAGGATGGCAAGTGC+TGG 0.493484 2:+82005196 MsG0280011287.01.T01:CDS
TAGGGATAATCCATCGATCT+CGG 0.494394 2:+82011307 MsG0280011287.01.T01:CDS
CTGCCTGACTCAGCCAAGCT+GGG 0.494779 2:+82010675 MsG0280011287.01.T01:CDS
GGTGCTAGGAAAGCTTCAAC+AGG 0.504246 2:-82011257 None:intergenic
GAGGAAAATGACCACTTTCG+AGG 0.504278 2:-82011284 None:intergenic
TAATGAGGCACTTGCTAGGA+TGG 0.505197 2:+82005186 MsG0280011287.01.T01:CDS
AAGAGGATGATTGAGATGCT+TGG 0.505379 2:+82010610 MsG0280011287.01.T01:intron
GATGTCATTGTATAAACAGT+GGG 0.505445 2:+82004751 None:intergenic
CTTGGATCTGCCACTTGTTG+GGG 0.505692 2:+82010628 MsG0280011287.01.T01:CDS
CTTCTCATATCCTCTGCAGC+TGG 0.510191 2:+82005287 MsG0280011287.01.T01:CDS
ATTGGTCGATTCCTAGGTGT+TGG 0.510993 2:+82005352 MsG0280011287.01.T01:CDS
TAGCACCTGCCCCTCGAAAG+TGG 0.511987 2:+82011273 MsG0280011287.01.T01:CDS
AGGGATAATCCATCGATCTC+GGG 0.512536 2:+82011308 MsG0280011287.01.T01:CDS
CATCAAATACAATATCATGT+TGG 0.514107 2:-82005227 None:intergenic
ACTTTCGAGGGGCAGGTGCT+AGG 0.516994 2:-82011271 None:intergenic
AGCACTCTCTGGATTGGCAA+TGG 0.530645 2:+82007538 MsG0280011287.01.T01:CDS
TTGAGCGTCGGAGCTTGTGC+AGG 0.536149 2:-82010760 None:intergenic
AGGAAAATGACCACTTTCGA+GGG 0.542238 2:-82011283 None:intergenic
GTCTGCCCCAGTGAGACAAA+GGG 0.546103 2:+82010727 MsG0280011287.01.T01:CDS
ATCACAATTGCGTCTCCGGA+AGG 0.546849 2:-82011358 None:intergenic
CTGATAGGAATTGGAAATGG+TGG 0.549275 2:+82006388 MsG0280011287.01.T01:CDS
ATTGAAAACACTACTTCAAG+TGG 0.549303 2:+82007599 MsG0280011287.01.T01:CDS
TTGTTTGGCTGGTATAGCTG+AGG 0.550780 2:+82007445 MsG0280011287.01.T01:CDS
CAATCCACAAATTGATGACA+AGG 0.554131 2:+82007822 MsG0280011287.01.T01:CDS
ATGAGGTGGTAGTTGTGTTG+AGG 0.556390 2:+82010698 MsG0280011287.01.T01:CDS
AGTAACATTGCCATTTGACC+TGG 0.557875 2:-82006352 None:intergenic
AGTCTGCCCCAGTGAGACAA+AGG 0.559198 2:+82010726 MsG0280011287.01.T01:CDS
CAGCTAATGAGGCACTTGCT+AGG 0.560867 2:+82005182 MsG0280011287.01.T01:intron
GGTGGATTGCTGCAAGTAGG+AGG 0.569731 2:-82006307 None:intergenic
GAGTAGCTGTAGCAAGATGA+AGG 0.573554 2:-82005259 None:intergenic
GAGTTAACTGAATTCAAGAA+TGG 0.573785 2:+82007874 MsG0280011287.01.T01:CDS
TTGGATACTTGATCAGCTGT+AGG 0.577217 2:-82007745 None:intergenic
ACTACCACCTCATCCCAGCT+TGG 0.577700 2:-82010688 None:intergenic
TAGTGATGAAACTAGTTCAA+AGG 0.587940 2:+82007846 MsG0280011287.01.T01:CDS
TGTGAAATTTCCAGCTGCAG+AGG 0.589353 2:-82005297 None:intergenic
TTGAAATCACCCGAGATCGA+TGG 0.590801 2:-82011317 None:intergenic
AGAAAGAAAGCAATTCAGGC+AGG 0.591725 2:+82007362 MsG0280011287.01.T01:CDS
GCTTGGCTGAGTCAGGCAGA+CGG 0.594311 2:-82010671 None:intergenic
GAGTGAAGAAAATGGTTCCA+AGG 0.598642 2:+82007771 MsG0280011287.01.T01:CDS
TGATGTCATTGTATAAACAG+TGG 0.599888 2:+82004750 None:intergenic
TCAGCCAAGCTGGGATGAGG+TGG 0.600589 2:+82010684 MsG0280011287.01.T01:CDS
CTTCAAGTGGAGGAAAAGAT+GGG 0.602416 2:+82007612 MsG0280011287.01.T01:CDS
GATACCAATGATAAAAGGCA+TGG 0.603181 2:-82005065 None:intergenic
GGCTGTATATCAGCAAAACC+AGG 0.607418 2:+82006334 MsG0280011287.01.T01:CDS
TCACAATTGCGTCTCCGGAA+GGG 0.611592 2:-82011357 None:intergenic
GCTGATATACAGCCTTCAGG+TGG 0.623699 2:-82006325 None:intergenic
CCTCTCACTTACTTGAGCGT+CGG 0.625830 2:-82010772 None:intergenic
TTAACTGAATTCAAGAATGG+TGG 0.626429 2:+82007877 MsG0280011287.01.T01:CDS
GAAAACACTACTTCAAGTGG+AGG 0.636406 2:+82007602 MsG0280011287.01.T01:CDS
ACTTGCAGCAATCCACCTGA+AGG 0.637785 2:+82006313 MsG0280011287.01.T01:CDS
TCAGGTGGATTGCTGCAAGT+AGG 0.653513 2:-82006310 None:intergenic
AGTGGATCTACCCCAACAAG+TGG 0.653552 2:-82010638 None:intergenic
ATACCAGCCAAACAAAGTGA+AGG 0.655978 2:-82007437 None:intergenic
GCAGACGGCGGACAAACCAG+TGG 0.665705 2:-82010656 None:intergenic
AAACCACAAAGAAGCAAGGG+TGG 0.667497 2:+82005034 MsG0280011287.01.T01:CDS
TATAGCCATTTACTTGACGG+AGG 0.668150 2:-82011212 None:intergenic
ATTTAAAGTAGCTAGCAATG+TGG 0.685347 2:-82004865 None:intergenic
TGGCTGAGTCAGGCAGACGG+CGG 0.687171 2:-82010668 None:intergenic
GATCGATGGATTATCCCTAG+AGG 0.689361 2:-82011303 None:intergenic
TCTGCCCCAGTGAGACAAAG+GGG 0.689455 2:+82010728 MsG0280011287.01.T01:CDS
CTGCCCCAGTGAGACAAAGG+GGG 0.697147 2:+82010729 MsG0280011287.01.T01:CDS
TATAGGGAATGTCAATGCTG+TGG 0.699156 2:+82006257 MsG0280011287.01.T01:intron
GGAAAATGACCACTTTCGAG+GGG 0.699602 2:-82011282 None:intergenic
TGAAGAAAATGGTTCCAAGG+AGG 0.705179 2:+82007774 MsG0280011287.01.T01:CDS
TAGAACCTATTCCAACACCT+AGG 0.705760 2:-82005363 None:intergenic
ATGTCATTGTATAAACAGTG+GGG 0.719844 2:+82004752 None:intergenic
TGTTGAAAATGTCTGCAATG+TGG 0.749104 2:+82007408 MsG0280011287.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTTATTTATTATTT+TGG + Chr2:82008201-82008220 MsG0280011287.01.T01:intron 0.0%
!! AAAAAACTAATAATTTATGA+AGG - Chr2:82008165-82008184 None:intergenic 10.0%
!! AATTTATATTAAAATTGATC+CGG + Chr2:82010579-82010598 MsG0280011287.01.T01:intron 10.0%
!! TAAAAGATAGATATATATAT+AGG - Chr2:82004914-82004933 None:intergenic 10.0%
!! TGATTAATTAAAGATTATAT+AGG + Chr2:82005789-82005808 MsG0280011287.01.T01:intron 10.0%
!!! AATTAATATTCTGAAATTAT+TGG + Chr2:82006179-82006198 MsG0280011287.01.T01:intron 10.0%
!! AAAGAATATATAATATTACC+AGG - Chr2:82005399-82005418 None:intergenic 15.0%
!! ATATAAGTATTACAAAGATA+AGG - Chr2:82007195-82007214 None:intergenic 15.0%
!! ATATTATTAAGTCCAATTAT+GGG + Chr2:82005481-82005500 MsG0280011287.01.T01:intron 15.0%
!! GAGAAATTATAAAAGATAAT+TGG + Chr2:82009338-82009357 MsG0280011287.01.T01:intron 15.0%
!! TAATACACTATTACTATTAT+CGG - Chr2:82008384-82008403 None:intergenic 15.0%
!! TAGATACCAATAAAAAAAAA+TGG + Chr2:82004949-82004968 MsG0280011287.01.T01:exon 15.0%
!! TATAAATTAGGAAAATTCTA+TGG - Chr2:82004844-82004863 None:intergenic 15.0%
!! TTATCTTTGTAATACTTATA+TGG + Chr2:82007194-82007213 MsG0280011287.01.T01:intron 15.0%
!!! ACACATTTTTATTTTCTTTA+AGG + Chr2:82009023-82009042 MsG0280011287.01.T01:intron 15.0%
!!! AGTTGTTATTTTAAATTCTT+AGG + Chr2:82008230-82008249 MsG0280011287.01.T01:intron 15.0%
!!! ATTATCTTTTATAATTTCTC+AGG - Chr2:82009338-82009357 None:intergenic 15.0%
!!! GGTAATATTATATATTCTTT+TGG + Chr2:82005399-82005418 MsG0280011287.01.T01:intron 15.0%
!!! TATTTTCTTTAAGGAATAAA+AGG + Chr2:82009032-82009051 MsG0280011287.01.T01:intron 15.0%
!! AAACTAATAATTTATGAAGG+AGG - Chr2:82008162-82008181 None:intergenic 20.0%
!! AATGAAATCAAAATAATTCG+TGG - Chr2:82011154-82011173 None:intergenic 20.0%
!! ATCAAATACAATATCATGTT+GGG - Chr2:82005229-82005248 None:intergenic 20.0%
!! ATGAAATCAAACGTTTAATA+TGG - Chr2:82006905-82006924 None:intergenic 20.0%
!! ATTGGTATAATGAAAAAAGT+TGG + Chr2:82006197-82006216 MsG0280011287.01.T01:intron 20.0%
!! CAATGGAATAACTTTAATAA+TGG - Chr2:82007045-82007064 None:intergenic 20.0%
!! CAGGTGAAAAATAAATATTA+AGG + Chr2:82008986-82009005 MsG0280011287.01.T01:intron 20.0%
!! CATATTATTAAGTCCAATTA+TGG + Chr2:82005480-82005499 MsG0280011287.01.T01:intron 20.0%
!! CCAATAAAAAAAAATGGATA+AGG + Chr2:82004955-82004974 MsG0280011287.01.T01:exon 20.0%
!! CTCGAATATTTAATTGATAT+AGG - Chr2:82006016-82006035 None:intergenic 20.0%
!! GATTCTGATAATATTAACAA+GGG + Chr2:82007637-82007656 MsG0280011287.01.T01:intron 20.0%
!! GCTTCTTTCAAAAAAAAAAA+AGG - Chr2:82005705-82005724 None:intergenic 20.0%
!! GTATGAAAAGAATCATATAA+AGG + Chr2:82006123-82006142 MsG0280011287.01.T01:intron 20.0%
!! TCATGTTATAAAACAAATTG+TGG + Chr2:82010272-82010291 MsG0280011287.01.T01:intron 20.0%
!! TCATTTCGACAAATATTTAT+GGG + Chr2:82007660-82007679 MsG0280011287.01.T01:intron 20.0%
!! TGAAATCAAACGTTTAATAT+GGG - Chr2:82006904-82006923 None:intergenic 20.0%
!! TTATTAAAGTTATTCCATTG+TGG + Chr2:82007045-82007064 MsG0280011287.01.T01:intron 20.0%
!!! AAAAGATAAGAAAAGTATCA+TGG - Chr2:82005449-82005468 None:intergenic 20.0%
!!! AAATATTAAGGCATCTTAAA+AGG + Chr2:82008998-82009017 MsG0280011287.01.T01:intron 20.0%
!!! ATTTTTGTTTCTAAGTCAAA+AGG - Chr2:82005588-82005607 None:intergenic 20.0%
!!! CCTTATCCATTTTTTTTTAT+TGG - Chr2:82004958-82004977 None:intergenic 20.0%
!!! CTTTATTTTTACTTTGAATG+AGG + Chr2:82005119-82005138 MsG0280011287.01.T01:intron 20.0%
!!! CTTTGTAATAAAACTCATTT+TGG - Chr2:82007487-82007506 None:intergenic 20.0%
!!! GAATTTTCTTTTCTTTAACT+TGG - Chr2:82006444-82006463 None:intergenic 20.0%
!!! GATTATATAGGAAGTATATT+AGG + Chr2:82005801-82005820 MsG0280011287.01.T01:intron 20.0%
!!! TGAAAGTTTTCTGTTTTTAT+AGG - Chr2:82006712-82006731 None:intergenic 20.0%
!!! TGTTATTTGAACAAAAATTC+AGG + Chr2:82006862-82006881 MsG0280011287.01.T01:intron 20.0%
!!! TGTTTTTTATTTTCTTCACT+TGG + Chr2:82007310-82007329 MsG0280011287.01.T01:intron 20.0%
!!! TTACAAATATCAACATCTTT+TGG - Chr2:82009533-82009552 None:intergenic 20.0%
!!! TTATTTTAAAAAGGAATCTG+AGG - Chr2:82006081-82006100 None:intergenic 20.0%
!!! TTTTATTGCAGATTCTATAT+TGG + Chr2:82005334-82005353 MsG0280011287.01.T01:CDS 20.0%
!!! TTTTCACAGTTTTTGTTTTT+TGG - Chr2:82010085-82010104 None:intergenic 20.0%
!!! TTTTTATGATGGTAAAATTC+AGG - Chr2:82006753-82006772 None:intergenic 20.0%
! AAAAAAGAATTCTAGTATGC+AGG - Chr2:82010466-82010485 None:intergenic 25.0%
! AAATTTGCATCTCTAATTTG+AGG - Chr2:82010365-82010384 None:intergenic 25.0%
! AATCAAGACGTAAGTTTAAA+GGG + Chr2:82009232-82009251 MsG0280011287.01.T01:intron 25.0%
! AGTATGTGTATTATGAGAAA+AGG + Chr2:82010239-82010258 MsG0280011287.01.T01:intron 25.0%
! AGTCTTAACAACTATGAATA+TGG + Chr2:82009841-82009860 MsG0280011287.01.T01:intron 25.0%
! ATATGCAAAAGCTATAAAGA+TGG - Chr2:82006817-82006836 None:intergenic 25.0%
! ATGCAAAAGTGACAATATAA+AGG + Chr2:82005611-82005630 MsG0280011287.01.T01:intron 25.0%
! ATTTCATGTTCTTTAGCATT+TGG + Chr2:82006412-82006431 MsG0280011287.01.T01:CDS 25.0%
! CAAACAAACAAACAAAAAGA+AGG - Chr2:82006230-82006249 None:intergenic 25.0%
! CAACATGATATTGTATTTGA+TGG + Chr2:82005228-82005247 MsG0280011287.01.T01:CDS 25.0%
! CATCAAATACAATATCATGT+TGG - Chr2:82005230-82005249 None:intergenic 25.0%
! GAAGTTGTAATACAAATTGT+AGG - Chr2:82010120-82010139 None:intergenic 25.0%
! GATAAGATACCAATGATAAA+AGG - Chr2:82005073-82005092 None:intergenic 25.0%
! GGATTCTGATAATATTAACA+AGG + Chr2:82007636-82007655 MsG0280011287.01.T01:intron 25.0%
! GTAAACCTCAAAAAACTATT+GGG - Chr2:82009938-82009957 None:intergenic 25.0%
! GTATCATGGAATGAAAAAAA+AGG - Chr2:82005435-82005454 None:intergenic 25.0%
! GTATGTGTATTATGAGAAAA+GGG + Chr2:82010240-82010259 MsG0280011287.01.T01:intron 25.0%
! GTATTATTTAGTATGCAGTT+GGG + Chr2:82007714-82007733 MsG0280011287.01.T01:intron 25.0%
! GTCATTTCGACAAATATTTA+TGG + Chr2:82007659-82007678 MsG0280011287.01.T01:intron 25.0%
! TAGCAATGTGGATATAAATT+AGG - Chr2:82004856-82004875 None:intergenic 25.0%
! TATATTAAAATTGATCCGGT+TGG + Chr2:82010583-82010602 MsG0280011287.01.T01:intron 25.0%
! TATTTATACTAACCGTTGAT+GGG + Chr2:82010486-82010505 MsG0280011287.01.T01:intron 25.0%
! TGTATTATTTAGTATGCAGT+TGG + Chr2:82007713-82007732 MsG0280011287.01.T01:intron 25.0%
! TGTTATAAAACAAATTGTGG+TGG + Chr2:82010275-82010294 MsG0280011287.01.T01:intron 25.0%
! TTATTTATACTAACCGTTGA+TGG + Chr2:82010485-82010504 MsG0280011287.01.T01:intron 25.0%
! TTCAAGATTAGTGAAGAAAA+TGG + Chr2:82007915-82007934 MsG0280011287.01.T01:intron 25.0%
! TTTGATTGTCAAATTGCTTA+TGG - Chr2:82009680-82009699 None:intergenic 25.0%
!! AAATATTTATGGGTTATAGC+TGG + Chr2:82007670-82007689 MsG0280011287.01.T01:intron 25.0%
!! ACACATACTTTTCAATATAC+AGG - Chr2:82010228-82010247 None:intergenic 25.0%
!! CTAAAATAGCTTGTGTTATT+AGG + Chr2:82006935-82006954 MsG0280011287.01.T01:intron 25.0%
!! GGATTTTTGAATAATACTCA+TGG + Chr2:82007383-82007402 MsG0280011287.01.T01:CDS 25.0%
!! TGTGTAATTTTCACATAAAG+AGG - Chr2:82006645-82006664 None:intergenic 25.0%
!!! AAACGTTTGATTTCATTTTC+AGG + Chr2:82006909-82006928 MsG0280011287.01.T01:intron 25.0%
!!! AGGTTTCTAAGATTTTCTTA+TGG + Chr2:82008250-82008269 MsG0280011287.01.T01:intron 25.0%
!!! CTAACTCATTTTTACAAAAC+CGG + Chr2:82008668-82008687 MsG0280011287.01.T01:intron 25.0%
!!! GTTTGTTTGTTGTTGTTATA+GGG + Chr2:82006241-82006260 MsG0280011287.01.T01:intron 25.0%
!!! TGTTTGTTTGTTGTTGTTAT+AGG + Chr2:82006240-82006259 MsG0280011287.01.T01:intron 25.0%
!!! TTATGAGTTTTTAGGAAACT+TGG - Chr2:82010321-82010340 None:intergenic 25.0%
!!! TTTTAGCTATGCATATTAGT+TGG - Chr2:82008455-82008474 None:intergenic 25.0%
AAAATACAAAGATTGTTGGC+CGG + Chr2:82010424-82010443 MsG0280011287.01.T01:intron 30.0%
AAAGTTCTTATCAGCAAGTA+TGG + Chr2:82009138-82009157 MsG0280011287.01.T01:intron 30.0%
AAATCACAAAGGAAGAAGTT+CGG - Chr2:82011038-82011057 None:intergenic 30.0%
AAATTCGTTTATCACGAGAT+TGG + Chr2:82011086-82011105 MsG0280011287.01.T01:intron 30.0%
AATTAGTATGATACTCGTGA+AGG + Chr2:82008322-82008341 MsG0280011287.01.T01:intron 30.0%
AGAAAGAATCACAAATCAAG+GGG - Chr2:82005912-82005931 None:intergenic 30.0%
AGCCAAAATACAAAGATTGT+TGG + Chr2:82010420-82010439 MsG0280011287.01.T01:intron 30.0%
ATCCATGTGTCATAATCTTA+AGG - Chr2:82008277-82008296 None:intergenic 30.0%
ATCGCAATGTCTATTAACAT+CGG + Chr2:82007077-82007096 MsG0280011287.01.T01:intron 30.0%
ATGGTTCAACAATAAATCGT+TGG + Chr2:82006982-82007001 MsG0280011287.01.T01:intron 30.0%
ATTCTGATAGGAATTGGAAA+TGG + Chr2:82006385-82006404 MsG0280011287.01.T01:CDS 30.0%
ATTGAAAACACTACTTCAAG+TGG + Chr2:82007599-82007618 MsG0280011287.01.T01:CDS 30.0%
ATTTATTGTTGAACCATCTG+AGG - Chr2:82006979-82006998 None:intergenic 30.0%
CAATCAAGACGTAAGTTTAA+AGG + Chr2:82009231-82009250 MsG0280011287.01.T01:intron 30.0%
CATAAAATATGCAAGGTCTA+GGG + Chr2:82010044-82010063 MsG0280011287.01.T01:intron 30.0%
CCTTTATAAAAGAAGTCTAC+AGG + Chr2:82008967-82008986 MsG0280011287.01.T01:intron 30.0%
CTGATACCATGTTGAAATTT+GGG + Chr2:82008643-82008662 MsG0280011287.01.T01:intron 30.0%
CTTTAGCATCAAAGATAAGA+GGG + Chr2:82007245-82007264 MsG0280011287.01.T01:intron 30.0%
GAACACTTGAATTGAATCTA+TGG + Chr2:82005823-82005842 MsG0280011287.01.T01:intron 30.0%
GACAATGCATAAAATATGCA+AGG + Chr2:82010037-82010056 MsG0280011287.01.T01:intron 30.0%
GAGAAAGAATCACAAATCAA+GGG - Chr2:82005913-82005932 None:intergenic 30.0%
GAGTTAACTGAATTCAAGAA+TGG + Chr2:82007874-82007893 MsG0280011287.01.T01:CDS 30.0%
GATTATAGTAAAAGATCCTG+CGG - Chr2:82007173-82007192 None:intergenic 30.0%
GGTAAACCTCAAAAAACTAT+TGG - Chr2:82009939-82009958 None:intergenic 30.0%
GTACAATTTACTCCCATAAT+TGG - Chr2:82005496-82005515 None:intergenic 30.0%
GTATATATCCAAGATCATCT+TGG + Chr2:82006549-82006568 MsG0280011287.01.T01:intron 30.0%
TAATTCTTACCCTAAACTTG+TGG - Chr2:82010812-82010831 None:intergenic 30.0%
TAGTGATGAAACTAGTTCAA+AGG + Chr2:82007846-82007865 MsG0280011287.01.T01:CDS 30.0%
TCTGATACCATGTTGAAATT+TGG + Chr2:82008642-82008661 MsG0280011287.01.T01:intron 30.0%
TGAAATGATATGTCTGTCTA+AGG - Chr2:82007132-82007151 None:intergenic 30.0%
TGACAATATAAAGGAACTGA+GGG + Chr2:82005620-82005639 MsG0280011287.01.T01:intron 30.0%
TGAGAAAGAATCACAAATCA+AGG - Chr2:82005914-82005933 None:intergenic 30.0%
TGAGATTAATTTCCAAATCG+TGG + Chr2:82008066-82008085 MsG0280011287.01.T01:intron 30.0%
TGATACCATGTTGAAATTTG+GGG + Chr2:82008644-82008663 MsG0280011287.01.T01:intron 30.0%
TGATATAGCCATTTACTTGA+CGG - Chr2:82011218-82011237 None:intergenic 30.0%
TGCATGGCTTAATACTTAAA+AGG + Chr2:82009601-82009620 MsG0280011287.01.T01:intron 30.0%
TGGATTTAAACTGGAAAGTA+AGG + Chr2:82011106-82011125 MsG0280011287.01.T01:intron 30.0%
TGGTAGAAATAACGATCTTA+TGG + Chr2:82009158-82009177 MsG0280011287.01.T01:intron 30.0%
TGTGTATTATACTATCTTGC+AGG - Chr2:82009654-82009673 None:intergenic 30.0%
TTAACTGAATTCAAGAATGG+TGG + Chr2:82007877-82007896 MsG0280011287.01.T01:CDS 30.0%
TTAATCATACTTCAATGCAG+AGG + Chr2:82005651-82005670 MsG0280011287.01.T01:intron 30.0%
TTCCAAAGCTCTATTGTTAT+TGG - Chr2:82006466-82006485 None:intergenic 30.0%
TTCCAATAACAATAGAGCTT+TGG + Chr2:82006461-82006480 MsG0280011287.01.T01:CDS 30.0%
TTGAATATACGTACCAAGTT+TGG - Chr2:82006161-82006180 None:intergenic 30.0%
TTTCTTCTTCTGTTGATCAT+TGG + Chr2:82009502-82009521 MsG0280011287.01.T01:intron 30.0%
TTTGTCCAAAGCTTTCTATA+GGG - Chr2:82009209-82009228 None:intergenic 30.0%
TTTGTGATTCTTTCTCAACT+AGG + Chr2:82005917-82005936 MsG0280011287.01.T01:intron 30.0%
! AAGAAGCATATATGTATACC+TGG + Chr2:82005718-82005737 MsG0280011287.01.T01:intron 30.0%
! ATACTTTTCAATATACAGGC+TGG - Chr2:82010224-82010243 None:intergenic 30.0%
! ATCTGAAACATAAAGAGAGA+CGG + Chr2:82005868-82005887 MsG0280011287.01.T01:intron 30.0%
! ATTTAAAGTAGCTAGCAATG+TGG - Chr2:82004868-82004887 None:intergenic 30.0%
! CCTGTAGACTTCTTTTATAA+AGG - Chr2:82008970-82008989 None:intergenic 30.0%
! CTACTGCTTTATGAGTTTTT+AGG - Chr2:82010329-82010348 None:intergenic 30.0%
! CTTTGGAAATATTCTTCACT+TGG + Chr2:82006478-82006497 MsG0280011287.01.T01:CDS 30.0%
!! CAGCAATTTTTGAGAGTATA+AGG + Chr2:82007339-82007358 MsG0280011287.01.T01:CDS 30.0%
!! CGGTTTTGTAAAAATGAGTT+AGG - Chr2:82008670-82008689 None:intergenic 30.0%
!!! GATCTGAGTCTTTTTTATGA+TGG - Chr2:82006764-82006783 None:intergenic 30.0%
!!! TCACAGTTTTTGTTTTTTGG+TGG - Chr2:82010082-82010101 None:intergenic 30.0%
AAAAGAAGACACCAAGTTTC+CGG - Chr2:82007567-82007586 None:intergenic 35.0%
AACTCATCGGTATGTTTATG+AGG - Chr2:82009109-82009128 None:intergenic 35.0%
AAGACGGAATTTCCAACAAA+CGG + Chr2:82008858-82008877 MsG0280011287.01.T01:intron 35.0%
AAGGAGAAAGAAAGCAATTC+AGG + Chr2:82007358-82007377 MsG0280011287.01.T01:CDS 35.0%
AATAATTCGTGGCAATTGCA+CGG - Chr2:82011143-82011162 None:intergenic 35.0%
AATATACGTACCAAGTTTGG+TGG - Chr2:82006158-82006177 None:intergenic 35.0%
AATCACAAAGGAAGAAGTTC+GGG - Chr2:82011037-82011056 None:intergenic 35.0%
AATCTATGGCTAAAGTCTGT+GGG + Chr2:82005837-82005856 MsG0280011287.01.T01:intron 35.0%
ACAAAAACCACAAAGAAGCA+AGG + Chr2:82005030-82005049 MsG0280011287.01.T01:CDS 35.0%
AGCAAGAAAGAATAAGACAG+TGG - Chr2:82006619-82006638 None:intergenic 35.0%
AGGTGAACAATTTCTATCAC+CGG - Chr2:82010446-82010465 None:intergenic 35.0%
AGGTTCTATTATCAGTTTCC+TGG + Chr2:82005378-82005397 MsG0280011287.01.T01:CDS 35.0%
AGTAAAAAGAGCAGATAGAC+GGG - Chr2:82010521-82010540 None:intergenic 35.0%
ATATCCAAGATCATCTTGGT+TGG + Chr2:82006553-82006572 MsG0280011287.01.T01:intron 35.0%
ATGATGGTAAAATTCAGGTG+AGG - Chr2:82006748-82006767 None:intergenic 35.0%
ATTGTCTTGCCTAAGACATA+TGG - Chr2:82005946-82005965 None:intergenic 35.0%
CAAAAACCACAAAGAAGCAA+GGG + Chr2:82005031-82005050 MsG0280011287.01.T01:CDS 35.0%
CACATTGTATCGTATGAATG+AGG + Chr2:82009058-82009077 MsG0280011287.01.T01:intron 35.0%
CAGTAAAAAGAGCAGATAGA+CGG - Chr2:82010522-82010541 None:intergenic 35.0%
CATAAAGCAGTAGTTACTAC+TGG + Chr2:82010336-82010355 MsG0280011287.01.T01:intron 35.0%
CCTCTTATCTTTGATGCTAA+AGG - Chr2:82007247-82007266 None:intergenic 35.0%
CCTTTAGCATCAAAGATAAG+AGG + Chr2:82007244-82007263 MsG0280011287.01.T01:intron 35.0%
CTAACCTTGTCATCAATTTG+TGG - Chr2:82007829-82007848 None:intergenic 35.0%
CTTGAGAAGAGTTTACAAAG+AGG - Chr2:82008715-82008734 None:intergenic 35.0%
CTTTGCACACTATAACTCAT+CGG - Chr2:82009122-82009141 None:intergenic 35.0%
CTTTGTCCAAAGCTTTCTAT+AGG - Chr2:82009210-82009229 None:intergenic 35.0%
GAAAAAAGTTCCACCAAACT+TGG + Chr2:82006145-82006164 MsG0280011287.01.T01:intron 35.0%
GAAACACTAGACATAGTCTT+TGG - Chr2:82007515-82007534 None:intergenic 35.0%
GAATTATCATACTTGACCCA+AGG + Chr2:82010826-82010845 MsG0280011287.01.T01:intron 35.0%
GACCTTAAGATTATGACACA+TGG + Chr2:82008272-82008291 MsG0280011287.01.T01:intron 35.0%
GATACCAATGATAAAAGGCA+TGG - Chr2:82005068-82005087 None:intergenic 35.0%
GATCATCTTGGTTGGAAAAT+TGG + Chr2:82006561-82006580 MsG0280011287.01.T01:intron 35.0%
GCATAAAATATGCAAGGTCT+AGG + Chr2:82010043-82010062 MsG0280011287.01.T01:intron 35.0%
GCGTTAATTCTGATAGGAAT+TGG + Chr2:82006379-82006398 MsG0280011287.01.T01:CDS 35.0%
GCTTTCTATAGGGGAATATA+AGG - Chr2:82009199-82009218 None:intergenic 35.0%
GTATACCTTAGTCTATCAGT+TGG - Chr2:82006795-82006814 None:intergenic 35.0%
GTCAAAAGGTGACAATTCAA+AGG - Chr2:82005574-82005593 None:intergenic 35.0%
GTGACAATATAAAGGAACTG+AGG + Chr2:82005619-82005638 MsG0280011287.01.T01:intron 35.0%
TACGATAGAAGGCTTATAGT+TGG + Chr2:82007954-82007973 MsG0280011287.01.T01:intron 35.0%
TACGATTGTCAGGATAAGAT+TGG - Chr2:82010894-82010913 None:intergenic 35.0%
TAGTGAAGAAAATGGCTTGA+AGG + Chr2:82007923-82007942 MsG0280011287.01.T01:intron 35.0%
TATCAGTCCGAAGATAAGAA+TGG + Chr2:82007279-82007298 MsG0280011287.01.T01:intron 35.0%
TATTCCCCTATAGAAAGCTT+TGG + Chr2:82009201-82009220 MsG0280011287.01.T01:intron 35.0%
TCAATATGTGTTGTAGATCC+AGG - Chr2:82005739-82005758 None:intergenic 35.0%
TCACGAGATTGGATTTAAAC+TGG + Chr2:82011097-82011116 MsG0280011287.01.T01:intron 35.0%
TCCAAAGTGAGTGAAGAAAA+TGG + Chr2:82007763-82007782 MsG0280011287.01.T01:CDS 35.0%
TGACAATTCAAAGGAAGAGA+GGG - Chr2:82005565-82005584 None:intergenic 35.0%
TGGAAATTCCGTCTTTATTG+TGG - Chr2:82008853-82008872 None:intergenic 35.0%
TGGTATGTCTCTGAATGTAT+TGG - Chr2:82007981-82008000 None:intergenic 35.0%
TGTTGAAAATGTCTGCAATG+TGG + Chr2:82007408-82007427 MsG0280011287.01.T01:CDS 35.0%
TTACAACTCTCTTCAGCTTT+GGG - Chr2:82009965-82009984 None:intergenic 35.0%
TTATTCCATTGTGGTCAACA+GGG + Chr2:82007054-82007073 MsG0280011287.01.T01:intron 35.0%
TTGTCCAAAGCTTTCTATAG+GGG - Chr2:82009208-82009227 None:intergenic 35.0%
TTGTTCCAACTGATAGACTA+AGG + Chr2:82006787-82006806 MsG0280011287.01.T01:intron 35.0%
! ACCATTTTCTTCACTCACTT+TGG - Chr2:82007767-82007786 None:intergenic 35.0%
! AGTCGTGAAAATGACTTTTC+TGG - Chr2:82004818-82004837 None:intergenic 35.0%
! CAATCCACAAATTGATGACA+AGG + Chr2:82007822-82007841 MsG0280011287.01.T01:CDS 35.0%
! GGCCAACAATCTTTGTATTT+TGG - Chr2:82010425-82010444 None:intergenic 35.0%
! TCTAGCAGGAACTCTTTTAT+TGG + Chr2:82008012-82008031 MsG0280011287.01.T01:intron 35.0%
! TTCAGTTGAATTTTCCTCCT+TGG - Chr2:82007791-82007810 None:intergenic 35.0%
! TTCTATATTGGTCGATTCCT+AGG + Chr2:82005346-82005365 MsG0280011287.01.T01:CDS 35.0%
! TTTTCCAACCAAGATGATCT+TGG - Chr2:82006560-82006579 None:intergenic 35.0%
!! AAAGTGGTCATTTTCCTCTA+GGG + Chr2:82011289-82011308 MsG0280011287.01.T01:CDS 35.0%
!! CTTGGTTGGAAAATTGGTTT+TGG + Chr2:82006567-82006586 MsG0280011287.01.T01:intron 35.0%
!! TTTACCATGTTTCTAGAGTG+CGG + Chr2:82009437-82009456 MsG0280011287.01.T01:intron 35.0%
!!! AATTTTGAAGCATGACAGTG+TGG - Chr2:82009738-82009757 None:intergenic 35.0%
!!! TGCATCCCAATAGTTTTTTG+AGG + Chr2:82009930-82009949 MsG0280011287.01.T01:intron 35.0%
!!! TTTTGTTGTTGCAGCTAATG+AGG + Chr2:82005171-82005190 MsG0280011287.01.T01:intron 35.0%
AACTGAGCAAAATAGGGGTT+AGG + Chr2:82010854-82010873 MsG0280011287.01.T01:intron 40.0%
AAGAGGATGATTGAGATGCT+TGG + Chr2:82010610-82010629 MsG0280011287.01.T01:intron 40.0%
AAGTAAGTGAGAGGTTCAAG+AGG + Chr2:82010781-82010800 MsG0280011287.01.T01:intron 40.0%
ACAAGACAACAGTCACTTGA+TGG - Chr2:82009792-82009811 None:intergenic 40.0%
ACATGTCACATGTGTTTCAC+GGG + Chr2:82008093-82008112 MsG0280011287.01.T01:intron 40.0%
ACTAGGACTCCATATGTCTT+AGG + Chr2:82005934-82005953 MsG0280011287.01.T01:intron 40.0%
ACTAGGGCGAACAACAATAA+AGG + Chr2:82008524-82008543 MsG0280011287.01.T01:intron 40.0%
ACTTCAAGTGGAGGAAAAGA+TGG + Chr2:82007611-82007630 MsG0280011287.01.T01:CDS 40.0%
AGAAAGAAAGCAATTCAGGC+AGG + Chr2:82007362-82007381 MsG0280011287.01.T01:CDS 40.0%
AGCAAAATAGGGGTTAGGTA+GGG + Chr2:82010859-82010878 MsG0280011287.01.T01:intron 40.0%
AGCATCTCAATCATCCTCTT+AGG - Chr2:82010610-82010629 None:intergenic 40.0%
AGGAAAATGACCACTTTCGA+GGG - Chr2:82011286-82011305 None:intergenic 40.0%
AGGAGGAATAGTACGATAGA+AGG + Chr2:82007943-82007962 MsG0280011287.01.T01:intron 40.0%
ATACCAGCCAAACAAAGTGA+AGG - Chr2:82007440-82007459 None:intergenic 40.0%
ATCAGCAAAACCAGGTCAAA+TGG + Chr2:82006342-82006361 MsG0280011287.01.T01:CDS 40.0%
ATCCTGACAATCGTACATGT+TGG + Chr2:82010899-82010918 MsG0280011287.01.T01:intron 40.0%
ATTGACCATTGCGTCAAACT+TGG + Chr2:82009259-82009278 MsG0280011287.01.T01:intron 40.0%
CAAACCAAATGCCGCAATTT+AGG + Chr2:82008813-82008832 MsG0280011287.01.T01:intron 40.0%
CAATATACAGGCTGGATTTC+TGG - Chr2:82010216-82010235 None:intergenic 40.0%
CACATGTCACATGTGTTTCA+CGG + Chr2:82008092-82008111 MsG0280011287.01.T01:intron 40.0%
CCCAAGTCCATTCTTATCTT+CGG - Chr2:82007289-82007308 None:intergenic 40.0%
CCTATCCTCGATCTATTGTT+GGG - Chr2:82008621-82008640 None:intergenic 40.0%
CCTGCTAGAAAGAATGTCAT+TGG - Chr2:82008001-82008020 None:intergenic 40.0%
CCTTTGTGATTTACCGATGT+GGG + Chr2:82011046-82011065 MsG0280011287.01.T01:intron 40.0%
CTCTCTGCGTTAATTCTGAT+AGG + Chr2:82006373-82006392 MsG0280011287.01.T01:CDS 40.0%
CTGAGAACTGAGCAAAATAG+GGG + Chr2:82010849-82010868 MsG0280011287.01.T01:intron 40.0%
CTGATAGGAATTGGAAATGG+TGG + Chr2:82006388-82006407 MsG0280011287.01.T01:CDS 40.0%
CTTCAAGTGGAGGAAAAGAT+GGG + Chr2:82007612-82007631 MsG0280011287.01.T01:CDS 40.0%
CTTTGTGATTTACCGATGTG+GGG + Chr2:82011047-82011066 MsG0280011287.01.T01:intron 40.0%
GAAAACACTACTTCAAGTGG+AGG + Chr2:82007602-82007621 MsG0280011287.01.T01:CDS 40.0%
GAAACAGTGAAGACAATGCA+TGG + Chr2:82009585-82009604 MsG0280011287.01.T01:intron 40.0%
GAACAAGATATAGCCTCAGA+TGG + Chr2:82006963-82006982 MsG0280011287.01.T01:intron 40.0%
GAATCTATGGCTAAAGTCTG+TGG + Chr2:82005836-82005855 MsG0280011287.01.T01:intron 40.0%
GACAATCGTACATGTTGGTA+GGG + Chr2:82010904-82010923 MsG0280011287.01.T01:intron 40.0%
GAGAAGAGTTTACAAAGAGG+AGG - Chr2:82008712-82008731 None:intergenic 40.0%
GAGTGAAGAAAATGGTTCCA+AGG + Chr2:82007771-82007790 MsG0280011287.01.T01:CDS 40.0%
GCAATAAAAGCAGCAACAAC+AGG - Chr2:82005323-82005342 None:intergenic 40.0%
GCAATGTCTATTAACATCGG+AGG + Chr2:82007080-82007099 MsG0280011287.01.T01:intron 40.0%
GCATAGCTAAAACCATTACG+AGG + Chr2:82008463-82008482 MsG0280011287.01.T01:intron 40.0%
GCTGAGAACTGAGCAAAATA+GGG + Chr2:82010848-82010867 MsG0280011287.01.T01:intron 40.0%
GGATGGAATCACATAGTTTC+TGG - Chr2:82010195-82010214 None:intergenic 40.0%
GGCTATAACAGTAGTACTCA+TGG + Chr2:82009458-82009477 MsG0280011287.01.T01:intron 40.0%
GTGACAATTCAAAGGAAGAG+AGG - Chr2:82005566-82005585 None:intergenic 40.0%
GTGCAATGAAAGCAAACCAA+AGG + Chr2:82008487-82008506 MsG0280011287.01.T01:intron 40.0%
GTTACAACTCTCTTCAGCTT+TGG - Chr2:82009966-82009985 None:intergenic 40.0%
GTTATTCCATTGTGGTCAAC+AGG + Chr2:82007053-82007072 MsG0280011287.01.T01:intron 40.0%
TACCAACATGTACGATTGTC+AGG - Chr2:82010904-82010923 None:intergenic 40.0%
TAGAACCTATTCCAACACCT+AGG - Chr2:82005366-82005385 None:intergenic 40.0%
TAGGGATAATCCATCGATCT+CGG + Chr2:82011307-82011326 MsG0280011287.01.T01:CDS 40.0%
TATAGCCATTTACTTGACGG+AGG - Chr2:82011215-82011234 None:intergenic 40.0%
TATAGGGAATGTCAATGCTG+TGG + Chr2:82006257-82006276 MsG0280011287.01.T01:intron 40.0%
TCAAACCAAGTTTGACGCAA+TGG - Chr2:82009267-82009286 None:intergenic 40.0%
TCCTTTGTGATTTACCGATG+TGG + Chr2:82011045-82011064 MsG0280011287.01.T01:intron 40.0%
TCTATCTACCTTCCGTTTGT+TGG - Chr2:82008873-82008892 None:intergenic 40.0%
TGAAGAAAATGGCTTGAAGG+AGG + Chr2:82007926-82007945 MsG0280011287.01.T01:intron 40.0%
TGAAGAAAATGGTTCCAAGG+AGG + Chr2:82007774-82007793 MsG0280011287.01.T01:CDS 40.0%
TGAATTCAAGAATGGTGGTC+AGG + Chr2:82007882-82007901 MsG0280011287.01.T01:CDS 40.0%
TGACAATCGTACATGTTGGT+AGG + Chr2:82010903-82010922 MsG0280011287.01.T01:intron 40.0%
TGCAACTCTCATCTGTTCTA+TGG + Chr2:82009891-82009910 MsG0280011287.01.T01:intron 40.0%
TGCTATGACAGCTATAGTTG+TGG - Chr2:82006514-82006533 None:intergenic 40.0%
TGCTGCTGATGAAGAAGAAA+TGG + Chr2:82005000-82005019 MsG0280011287.01.T01:CDS 40.0%
TGTCATGACACCCTAATAGT+CGG - Chr2:82008348-82008367 None:intergenic 40.0%
TGTGTCTTCTGCAATGTTGT+TGG - Chr2:82008901-82008920 None:intergenic 40.0%
TTAGGCCCCAAATTTCAACA+TGG - Chr2:82008652-82008671 None:intergenic 40.0%
TTAGTATGCAGTTGGGCTTA+TGG + Chr2:82007721-82007740 MsG0280011287.01.T01:intron 40.0%
TTGGATACTTGATCAGCTGT+AGG - Chr2:82007748-82007767 None:intergenic 40.0%
TTTCATTGCACTCCTCGTAA+TGG - Chr2:82008478-82008497 None:intergenic 40.0%
TTTGCTGATATACAGCCTTC+AGG - Chr2:82006331-82006350 None:intergenic 40.0%
TTTGTGATTTACCGATGTGG+GGG + Chr2:82011048-82011067 MsG0280011287.01.T01:intron 40.0%
! AATTCAGGTGAGGTTTTCGA+TGG - Chr2:82006738-82006757 None:intergenic 40.0%
! AGTAACATTGCCATTTGACC+TGG - Chr2:82006355-82006374 None:intergenic 40.0%
! CCAATGACATTCTTTCTAGC+AGG + Chr2:82007998-82008017 MsG0280011287.01.T01:intron 40.0%
! CCGAAGATAAGAATGGACTT+GGG + Chr2:82007286-82007305 MsG0280011287.01.T01:intron 40.0%
! CTTTTCCTCCGTCAAGTAAA+TGG + Chr2:82011207-82011226 MsG0280011287.01.T01:CDS 40.0%
! GCTGAGGCATTCAATGTTAT+TGG + Chr2:82007461-82007480 MsG0280011287.01.T01:CDS 40.0%
! GTCACCATGCCTTTTATCAT+TGG + Chr2:82005061-82005080 MsG0280011287.01.T01:CDS 40.0%
! TCCGAAGATAAGAATGGACT+TGG + Chr2:82007285-82007304 MsG0280011287.01.T01:intron 40.0%
! TGTGGTGGCTTTTCATATGA+AGG + Chr2:82010290-82010309 MsG0280011287.01.T01:intron 40.0%
!! ACTTGGTTTGAGCTTTTGAG+AGG + Chr2:82009276-82009295 MsG0280011287.01.T01:intron 40.0%
!! GAAAGTGGTCATTTTCCTCT+AGG + Chr2:82011288-82011307 MsG0280011287.01.T01:CDS 40.0%
!! TTCAAACTTTGAAGTACCGC+AGG + Chr2:82007154-82007173 MsG0280011287.01.T01:intron 40.0%
!! TTTATGAAGGAGGAGTGCTA+TGG - Chr2:82008152-82008171 None:intergenic 40.0%
!!! TTTTACAAAACCGGCTTGCA+AGG + Chr2:82008677-82008696 MsG0280011287.01.T01:intron 40.0%
AAACCACAAAGAAGCAAGGG+TGG + Chr2:82005034-82005053 MsG0280011287.01.T01:CDS 45.0%
AGAGTCCTATTTATCCGACG+TGG + Chr2:82008733-82008752 MsG0280011287.01.T01:intron 45.0%
AGGGATAATCCATCGATCTC+GGG + Chr2:82011308-82011327 MsG0280011287.01.T01:CDS 45.0%
AGGGCGAACAACAATAAAGG+CGG + Chr2:82008527-82008546 MsG0280011287.01.T01:intron 45.0%
AGGGTTACACACAACGTCTT+GGG - Chr2:82010986-82011005 None:intergenic 45.0%
AGTGTTTCTTCAGCACTCTC+TGG + Chr2:82007527-82007546 MsG0280011287.01.T01:CDS 45.0%
ATAATCCCCCTTTGTCTCAC+TGG - Chr2:82010737-82010756 None:intergenic 45.0%
ATCATCCTCTTAGGTCCAAC+CGG - Chr2:82010601-82010620 None:intergenic 45.0%
ATCTTCGGACTGATACTCAC+TGG - Chr2:82007274-82007293 None:intergenic 45.0%
ATGAGGTGGTAGTTGTGTTG+AGG + Chr2:82010698-82010717 MsG0280011287.01.T01:CDS 45.0%
ATTAACATCGGAGGCTCGTT+TGG + Chr2:82007089-82007108 MsG0280011287.01.T01:intron 45.0%
CAAACCAAAGGCCACAGTTT+AGG + Chr2:82008499-82008518 MsG0280011287.01.T01:intron 45.0%
CCCAACAATAGATCGAGGAT+AGG + Chr2:82008618-82008637 MsG0280011287.01.T01:intron 45.0%
CCCACATCGGTAAATCACAA+AGG - Chr2:82011049-82011068 None:intergenic 45.0%
CGGAATTTCCAACAAACGGA+AGG + Chr2:82008862-82008881 MsG0280011287.01.T01:intron 45.0%
CGTGAAACACATGTGACATG+TGG - Chr2:82008094-82008113 None:intergenic 45.0%
CTCTAACACCTTCATTGTGC+TGG - Chr2:82008780-82008799 None:intergenic 45.0%
GAGCAAAATAGGGGTTAGGT+AGG + Chr2:82010858-82010877 MsG0280011287.01.T01:intron 45.0%
GAGGAAAATGACCACTTTCG+AGG - Chr2:82011287-82011306 None:intergenic 45.0%
GAGTAGCTGTAGCAAGATGA+AGG - Chr2:82005262-82005281 None:intergenic 45.0%
GAGTCCTATTTATCCGACGT+GGG + Chr2:82008734-82008753 MsG0280011287.01.T01:intron 45.0%
GCAATCATTTGTAGCCCTTC+CGG + Chr2:82011343-82011362 MsG0280011287.01.T01:CDS 45.0%
GCCTATCCTCGATCTATTGT+TGG - Chr2:82008622-82008641 None:intergenic 45.0%
GCTGTCATAGCAGCTCTATT+TGG + Chr2:82006522-82006541 MsG0280011287.01.T01:intron 45.0%
GCTTGCACCTTCACTTTGTT+TGG + Chr2:82007430-82007449 MsG0280011287.01.T01:CDS 45.0%
GGAAAATGACCACTTTCGAG+GGG - Chr2:82011285-82011304 None:intergenic 45.0%
GGCTGAGAACTGAGCAAAAT+AGG + Chr2:82010847-82010866 MsG0280011287.01.T01:intron 45.0%
GGCTGTATATCAGCAAAACC+AGG + Chr2:82006334-82006353 MsG0280011287.01.T01:CDS 45.0%
GGGGCATACCACAATAAAGA+CGG + Chr2:82008842-82008861 MsG0280011287.01.T01:intron 45.0%
TAACACCCCGATTACAATGC+AGG - Chr2:82011012-82011031 None:intergenic 45.0%
TAATCCCCCTTTGTCTCACT+GGG - Chr2:82010736-82010755 None:intergenic 45.0%
TAGTCCCACGTCGGATAAAT+AGG - Chr2:82008741-82008760 None:intergenic 45.0%
TATCAACTGAGCTAAGCACG+AGG - Chr2:82010015-82010034 None:intergenic 45.0%
TGACATGTGGTTCCACGATT+TGG - Chr2:82008081-82008100 None:intergenic 45.0%
TGCATGATTGACAGAGATCG+TGG - Chr2:82009381-82009400 None:intergenic 45.0%
TGTGAAATTTCCAGCTGCAG+AGG - Chr2:82005300-82005319 None:intergenic 45.0%
TTCTTCAGCACTCTCTGGAT+TGG + Chr2:82007532-82007551 MsG0280011287.01.T01:CDS 45.0%
TTGAAATCACCCGAGATCGA+TGG - Chr2:82011320-82011339 None:intergenic 45.0%
TTGTTTGGCTGGTATAGCTG+AGG + Chr2:82007445-82007464 MsG0280011287.01.T01:CDS 45.0%
TTTGCTCAGTTCTCAGCCTT+GGG - Chr2:82010845-82010864 None:intergenic 45.0%
! ATACAGGCTGGATTTCTGGA+TGG - Chr2:82010212-82010231 None:intergenic 45.0%
! ATAGCCGCACTCTAGAAACA+TGG - Chr2:82009444-82009463 None:intergenic 45.0%
! ATTGGTCGATTCCTAGGTGT+TGG + Chr2:82005352-82005371 MsG0280011287.01.T01:CDS 45.0%
! CGTGCTTAGCTCAGTTGATA+TGG + Chr2:82010015-82010034 MsG0280011287.01.T01:intron 45.0%
! GATATAAGCATGAGTGCTGC+TGG - Chr2:82006597-82006616 None:intergenic 45.0%
! GTACATGTTGGTAGGGATGT+GGG + Chr2:82010911-82010930 MsG0280011287.01.T01:intron 45.0%
! TAATGAGGCACTTGCTAGGA+TGG + Chr2:82005186-82005205 MsG0280011287.01.T01:CDS 45.0%
! TGCATTGTAATCGGGGTGTT+AGG + Chr2:82011011-82011030 MsG0280011287.01.T01:intron 45.0%
! TTTTGCTCAGTTCTCAGCCT+TGG - Chr2:82010846-82010865 None:intergenic 45.0%
!! CAGCACAATGAAGGTGTTAG+AGG + Chr2:82008778-82008797 MsG0280011287.01.T01:intron 45.0%
!! CGATTCCTAGGTGTTGGAAT+AGG + Chr2:82005358-82005377 MsG0280011287.01.T01:CDS 45.0%
!! CTTCATTGTGCTGGCTTTGA+GGG - Chr2:82008771-82008790 None:intergenic 45.0%
!! GATCGATGGATTATCCCTAG+AGG - Chr2:82011306-82011325 None:intergenic 45.0%
!! TTCATTGTGCTGGCTTTGAG+GGG - Chr2:82008770-82008789 None:intergenic 45.0%
!!! ATATCATTTTTATTTTAAAA+AGG - Chr2:82006090-82006109 None:intergenic 5.0%
AAAAGCTCCATCCCCCACAT+CGG - Chr2:82011062-82011081 None:intergenic 50.0%
AAAGAGCAGATAGACGGGCA+AGG - Chr2:82010516-82010535 None:intergenic 50.0%
AATCCCCCTTTGTCTCACTG+GGG - Chr2:82010735-82010754 None:intergenic 50.0%
ACTCGTGAAGGCCGACTATT+AGG + Chr2:82008334-82008353 MsG0280011287.01.T01:intron 50.0%
ACTTGCAGCAATCCACCTGA+AGG + Chr2:82006313-82006332 MsG0280011287.01.T01:CDS 50.0%
AGACCACCCTTGCTTCTTTG+TGG - Chr2:82005040-82005059 None:intergenic 50.0%
AGAGGAGACGCCACAAGTTT+AGG + Chr2:82010799-82010818 MsG0280011287.01.T01:intron 50.0%
AGGCCACAGTTTAGGCAACT+AGG + Chr2:82008507-82008526 MsG0280011287.01.T01:intron 50.0%
AGTGGATCTACCCCAACAAG+TGG - Chr2:82010641-82010660 None:intergenic 50.0%
ATGCCGCAATTTAGGCGACT+AGG + Chr2:82008821-82008840 MsG0280011287.01.T01:intron 50.0%
ATGCTTCAAGCCCATTTGGC+CGG - Chr2:82008583-82008602 None:intergenic 50.0%
CAAGTGGAGGAAAAGATGGG+TGG + Chr2:82007615-82007634 MsG0280011287.01.T01:intron 50.0%
CCCTCAGCCTGCATTGTAAT+CGG + Chr2:82011002-82011021 MsG0280011287.01.T01:intron 50.0%
CCGATTACAATGCAGGCTGA+GGG - Chr2:82011005-82011024 None:intergenic 50.0%
CCTCAAAGCCAGCACAATGA+AGG + Chr2:82008769-82008788 MsG0280011287.01.T01:intron 50.0%
CCTCAGCCTGCATTGTAATC+GGG + Chr2:82011003-82011022 MsG0280011287.01.T01:intron 50.0%
CCTCTCACTTACTTGAGCGT+CGG - Chr2:82010775-82010794 None:intergenic 50.0%
CTCAGCCTGCATTGTAATCG+GGG + Chr2:82011004-82011023 MsG0280011287.01.T01:intron 50.0%
CTCGTGAAGGCCGACTATTA+GGG + Chr2:82008335-82008354 MsG0280011287.01.T01:intron 50.0%
CTTCTCATATCCTCTGCAGC+TGG + Chr2:82005287-82005306 MsG0280011287.01.T01:CDS 50.0%
GAGGAGACGCCACAAGTTTA+GGG + Chr2:82010800-82010819 MsG0280011287.01.T01:intron 50.0%
GAGGGTTACACACAACGTCT+TGG - Chr2:82010987-82011006 None:intergenic 50.0%
GCTGATATACAGCCTTCAGG+TGG - Chr2:82006328-82006347 None:intergenic 50.0%
GGAAGCCCAACAATAGATCG+AGG + Chr2:82008613-82008632 MsG0280011287.01.T01:intron 50.0%
GGCCACAGTTTAGGCAACTA+GGG + Chr2:82008508-82008527 MsG0280011287.01.T01:intron 50.0%
GGTGCTAGGAAAGCTTCAAC+AGG - Chr2:82011260-82011279 None:intergenic 50.0%
GGTGTTAGAGGCTGCAATGA+AGG + Chr2:82008790-82008809 MsG0280011287.01.T01:intron 50.0%
GTCCATGCTTCAAGCCCATT+TGG - Chr2:82008587-82008606 None:intergenic 50.0%
GTCGCCTAAATTGCGGCATT+TGG - Chr2:82008820-82008839 None:intergenic 50.0%
GTTGCCTAAACTGTGGCCTT+TGG - Chr2:82008506-82008525 None:intergenic 50.0%
TCACAATTGCGTCTCCGGAA+GGG - Chr2:82011360-82011379 None:intergenic 50.0%
TGATTTACCGATGTGGGGGA+TGG + Chr2:82011052-82011071 MsG0280011287.01.T01:intron 50.0%
TGCAAAACCAGTGAGCAAGC+TGG - Chr2:82006673-82006692 None:intergenic 50.0%
TGCCGCAATTTAGGCGACTA+GGG + Chr2:82008822-82008841 MsG0280011287.01.T01:intron 50.0%
TTGATCCGGTTGGACCTAAG+AGG + Chr2:82010593-82010612 MsG0280011287.01.T01:intron 50.0%
! AAGGTCTAGGGTTCGAACTC+TGG + Chr2:82010056-82010075 MsG0280011287.01.T01:intron 50.0%
! ACTTGTTGGGGTAGATCCAC+TGG + Chr2:82010640-82010659 MsG0280011287.01.T01:CDS 50.0%
! CAAAGAACCAGCTTGCTCAC+TGG + Chr2:82006663-82006682 MsG0280011287.01.T01:intron 50.0%
! CAGCTAATGAGGCACTTGCT+AGG + Chr2:82005182-82005201 MsG0280011287.01.T01:intron 50.0%
! CGTACATGTTGGTAGGGATG+TGG + Chr2:82010910-82010929 MsG0280011287.01.T01:intron 50.0%
! CTTGGATCTGCCACTTGTTG+GGG + Chr2:82010628-82010647 MsG0280011287.01.T01:CDS 50.0%
! GCACCTTCACTTTGTTTGGC+TGG + Chr2:82007434-82007453 MsG0280011287.01.T01:CDS 50.0%
! GCTTGGATCTGCCACTTGTT+GGG + Chr2:82010627-82010646 MsG0280011287.01.T01:CDS 50.0%
! TGCTTGGATCTGCCACTTGT+TGG + Chr2:82010626-82010645 MsG0280011287.01.T01:CDS 50.0%
!! ACTCTCTTCAGCTTTGGGTG+TGG - Chr2:82009960-82009979 None:intergenic 50.0%
!! AGCACTCTCTGGATTGGCAA+TGG + Chr2:82007538-82007557 MsG0280011287.01.T01:CDS 50.0%
!! CCTTCATTGTGCTGGCTTTG+AGG - Chr2:82008772-82008791 None:intergenic 50.0%
!! TCAGGTGGATTGCTGCAAGT+AGG - Chr2:82006313-82006332 None:intergenic 50.0%
!! TCATTGTGCTGGCTTTGAGG+GGG - Chr2:82008769-82008788 None:intergenic 50.0%
AATGACCACTTTCGAGGGGC+AGG - Chr2:82011281-82011300 None:intergenic 55.0%
ACTACCACCTCATCCCAGCT+TGG - Chr2:82010691-82010710 None:intergenic 55.0%
AGTCTGCCCCAGTGAGACAA+AGG + Chr2:82010726-82010745 MsG0280011287.01.T01:CDS 55.0%
CCCGATTACAATGCAGGCTG+AGG - Chr2:82011006-82011025 None:intergenic 55.0%
CCGACGCTCAAGTAAGTGAG+AGG + Chr2:82010772-82010791 MsG0280011287.01.T01:intron 55.0%
CGCCCTAGTTGCCTAAACTG+TGG - Chr2:82008513-82008532 None:intergenic 55.0%
CTTGCTAGGATGGCAAGTGC+TGG + Chr2:82005196-82005215 MsG0280011287.01.T01:CDS 55.0%
GCACTCTTCACCTTGCAAGC+CGG - Chr2:82008690-82008709 None:intergenic 55.0%
GCCCCTAGTCGCCTAAATTG+CGG - Chr2:82008827-82008846 None:intergenic 55.0%
GCCGCAATTTAGGCGACTAG+GGG + Chr2:82008823-82008842 MsG0280011287.01.T01:intron 55.0%
GCGATCCCTGTTGACCACAA+TGG - Chr2:82007062-82007081 None:intergenic 55.0%
GCTTGAAGCATGGACGATGC+GGG + Chr2:82008592-82008611 MsG0280011287.01.T01:intron 55.0%
GGCTTGAAGCATGGACGATG+CGG + Chr2:82008591-82008610 MsG0280011287.01.T01:intron 55.0%
GTCTGCCCCAGTGAGACAAA+GGG + Chr2:82010727-82010746 MsG0280011287.01.T01:CDS 55.0%
TCTGCCCCAGTGAGACAAAG+GGG + Chr2:82010728-82010747 MsG0280011287.01.T01:CDS 55.0%
TGCTTCAAGCCCATTTGGCC+GGG - Chr2:82008582-82008601 None:intergenic 55.0%
! GGCCAAATGGGCTTGAAGCA+TGG + Chr2:82008582-82008601 MsG0280011287.01.T01:intron 55.0%
!! AGGATGGCAAGTGCTGGACT+TGG + Chr2:82005202-82005221 MsG0280011287.01.T01:CDS 55.0%
!! GGTGGATTGCTGCAAGTAGG+AGG - Chr2:82006310-82006329 None:intergenic 55.0%
!! TCTGGATTGGCAATGGCTGC+CGG + Chr2:82007545-82007564 MsG0280011287.01.T01:CDS 55.0%
AAGGCAGCTCCAAGGGCAGA+GGG - Chr2:82010940-82010959 None:intergenic 60.0%
AAGTAGGAGGCTGCGTCGCT+GGG - Chr2:82006297-82006316 None:intergenic 60.0%
ACTTTCGAGGGGCAGGTGCT+AGG - Chr2:82011274-82011293 None:intergenic 60.0%
CATCCCAGCTTGGCTGAGTC+AGG - Chr2:82010681-82010700 None:intergenic 60.0%
CTGCCCCAGTGAGACAAAGG+GGG + Chr2:82010729-82010748 MsG0280011287.01.T01:CDS 60.0%
CTGCCTGACTCAGCCAAGCT+GGG + Chr2:82010675-82010694 MsG0280011287.01.T01:CDS 60.0%
GACTCAGCCAAGCTGGGATG+AGG + Chr2:82010681-82010700 MsG0280011287.01.T01:CDS 60.0%
GCTTGGCTGAGTCAGGCAGA+CGG - Chr2:82010674-82010693 None:intergenic 60.0%
GGCAATGGCTGCCGGAAACT+TGG + Chr2:82007553-82007572 MsG0280011287.01.T01:CDS 60.0%
TAGCACCTGCCCCTCGAAAG+TGG + Chr2:82011273-82011292 MsG0280011287.01.T01:CDS 60.0%
TCAGCCAAGCTGGGATGAGG+TGG + Chr2:82010684-82010703 MsG0280011287.01.T01:CDS 60.0%
TCTGCCCTTGGAGCTGCCTT+CGG + Chr2:82010940-82010959 MsG0280011287.01.T01:intron 60.0%
TCTGCCTGACTCAGCCAAGC+TGG + Chr2:82010674-82010693 MsG0280011287.01.T01:CDS 60.0%
TGTGGGTAACCCTCTGCCCT+TGG + Chr2:82010928-82010947 MsG0280011287.01.T01:intron 60.0%
!! TGTGCTGGCTTTGAGGGGGT+GGG - Chr2:82008765-82008784 None:intergenic 60.0%
!! TTGAGCGTCGGAGCTTGTGC+AGG - Chr2:82010763-82010782 None:intergenic 60.0%
!! TTGTGCTGGCTTTGAGGGGG+TGG - Chr2:82008766-82008785 None:intergenic 60.0%
AGGCTGCGTCGCTGGGATCA+TGG - Chr2:82006290-82006309 None:intergenic 65.0%
ATTTGGCCGGGCTGAAGCGC+GGG - Chr2:82008570-82008589 None:intergenic 65.0%
CAAGTAGGAGGCTGCGTCGC+TGG - Chr2:82006298-82006317 None:intergenic 65.0%
CAGGCCGAAGGCAGCTCCAA+GGG - Chr2:82010947-82010966 None:intergenic 65.0%
CATTTGGCCGGGCTGAAGCG+CGG - Chr2:82008571-82008590 None:intergenic 65.0%
GAAGGCAGCTCCAAGGGCAG+AGG - Chr2:82010941-82010960 None:intergenic 65.0%
GCAGACGGCGGACAAACCAG+TGG - Chr2:82010659-82010678 None:intergenic 65.0%
GCGCTTCAGCCCGGCCAAAT+GGG + Chr2:82008570-82008589 MsG0280011287.01.T01:intron 65.0%
TGGCTGAGTCAGGCAGACGG+CGG - Chr2:82010671-82010690 None:intergenic 65.0%
! TGAAGCGCGGGGGTGTGTGT+TGG - Chr2:82008558-82008577 None:intergenic 65.0%
!! GGGCAAGGAGCGCCCATCAA+CGG - Chr2:82010501-82010520 None:intergenic 65.0%
CGCGCTTCAGCCCGGCCAAA+TGG + Chr2:82008569-82008588 MsG0280011287.01.T01:intron 70.0%
GAGCTGCCTTCGGCCTGCGT+GGG + Chr2:82010950-82010969 MsG0280011287.01.T01:intron 70.0%
GCAGGCCGAAGGCAGCTCCA+AGG - Chr2:82010948-82010967 None:intergenic 70.0%
GGGATTGACCACGCCCACGC+AGG - Chr2:82010966-82010985 None:intergenic 70.0%
TTTGGCCGGGCTGAAGCGCG+GGG - Chr2:82008569-82008588 None:intergenic 70.0%
ACCACGCCCACGCAGGCCGA+AGG - Chr2:82010959-82010978 None:intergenic 75.0%
CACACCCCCGCGCTTCAGCC+CGG + Chr2:82008561-82008580 MsG0280011287.01.T01:intron 75.0%
GGAGCTGCCTTCGGCCTGCG+TGG + Chr2:82010949-82010968 MsG0280011287.01.T01:intron 75.0%
TTGGCCGGGCTGAAGCGCGG+GGG - Chr2:82008568-82008587 None:intergenic 75.0%
! GCCTTCGGCCTGCGTGGGCG+TGG + Chr2:82010955-82010974 MsG0280011287.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr2 gene 82004761 82011379 82004761 ID=MsG0280011287.01;Name=MsG0280011287.01
Chr2 mRNA 82004761 82011379 82004761 ID=MsG0280011287.01.T01;Parent=MsG0280011287.01;Name=MsG0280011287.01.T01;_AED=0.48;_eAED=0.59;_QI=207|0.33|0.28|1|1|1|7|0|464
Chr2 exon 82004761 82005082 82004761 ID=MsG0280011287.01.T01:exon:12189;Parent=MsG0280011287.01.T01
Chr2 exon 82005185 82005399 82005185 ID=MsG0280011287.01.T01:exon:12190;Parent=MsG0280011287.01.T01
Chr2 exon 82006262 82006499 82006262 ID=MsG0280011287.01.T01:exon:12191;Parent=MsG0280011287.01.T01
Chr2 exon 82007336 82007633 82007336 ID=MsG0280011287.01.T01:exon:12192;Parent=MsG0280011287.01.T01
Chr2 exon 82007732 82007903 82007732 ID=MsG0280011287.01.T01:exon:12193;Parent=MsG0280011287.01.T01
Chr2 exon 82010613 82010782 82010613 ID=MsG0280011287.01.T01:exon:12194;Parent=MsG0280011287.01.T01
Chr2 exon 82011193 82011379 82011193 ID=MsG0280011287.01.T01:exon:12195;Parent=MsG0280011287.01.T01
Chr2 five_prime_UTR 82004761 82004967 82004761 ID=MsG0280011287.01.T01:five_prime_utr;Parent=MsG0280011287.01.T01
Chr2 CDS 82004968 82005082 82004968 ID=MsG0280011287.01.T01:cds;Parent=MsG0280011287.01.T01
Chr2 CDS 82005185 82005399 82005185 ID=MsG0280011287.01.T01:cds;Parent=MsG0280011287.01.T01
Chr2 CDS 82006262 82006499 82006262 ID=MsG0280011287.01.T01:cds;Parent=MsG0280011287.01.T01
Chr2 CDS 82007336 82007633 82007336 ID=MsG0280011287.01.T01:cds;Parent=MsG0280011287.01.T01
Chr2 CDS 82007732 82007903 82007732 ID=MsG0280011287.01.T01:cds;Parent=MsG0280011287.01.T01
Chr2 CDS 82010613 82010782 82010613 ID=MsG0280011287.01.T01:cds;Parent=MsG0280011287.01.T01
Chr2 CDS 82011193 82011379 82011193 ID=MsG0280011287.01.T01:cds;Parent=MsG0280011287.01.T01
Gene Sequence

>MsG0280011287.01.T01

ATGGATAAGGAACTTCAACTTTGTTCAGTTGATGCTGCTGATGAAGAAGAAATGGTTTCTCAACAAAAACCACAAAGAAGCAAGGGTGGTCTTGTCACCATGCCTTTTATCATTGCTAATGAGGCACTTGCTAGGATGGCAAGTGCTGGACTTGGACCCAACATGATATTGTATTTGATGGATCTTACACCTTCATCTTGCTACAGCTACTCAGATACTTCTCATATCCTCTGCAGCTGGAAATTTCACACCTGTTGTTGCTGCTTTTATTGCAGATTCTATATTGGTCGATTCCTAGGTGTTGGAATAGGTTCTATTATCAGTTTCCTGGGAATGTCAATGCTGTGGTTAACAGCCATGATCCCAGCGACGCAGCCTCCTACTTGCAGCAATCCACCTGAAGGCTGTATATCAGCAAAACCAGGTCAAATGGCAATGTTACTCTCTGCGTTAATTCTGATAGGAATTGGAAATGGTGGTATTTCATGTTCTTTAGCATTTGGTGCAGACCAAGTTAAAGAAAAGAAAATTCCAATAACAATAGAGCTTTGGAAATATTCTTCACTTGTTGCAGCAATTTTTGAGAGTATAAGGAGAAAGAAAGCAATTCAGGCAGGATTTTTGAATAATACTCATGGAGTGTTGAAAATGTCTGCAATGTGGCTTGCACCTTCACTTTGTTTGGCTGGTATAGCTGAGGCATTCAATGTTATTGGCCAAAATGAGTTTTATTACAAAGAGTTTCCAAAGACTATGTCTAGTGTTTCTTCAGCACTCTCTGGATTGGCAATGGCTGCCGGAAACTTGGTGTCTTCTTTTGTATTCAGCACTATTGAAAACACTACTTCAAGTGGAGGAAAAGATGGTTGGGCTTATGGACCTACAGCTGATCAAGTATCCAAAGTGAGTGAAGAAAATGGTTCCAAGGAGGAAAATTCAACTGAATTCAAAAATGTCAATCCACAAATTGATGACAAGGTTAGTGATGAAACTAGTTCAAAGGAGAAAGAGTTAACTGAATTCAAGAATGGTGGTCAGAGGATGATTGAGATGCTTGGATCTGCCACTTGTTGGGGTAGATCCACTGGTTTGTCCGCCGTCTGCCTGACTCAGCCAAGCTGGGATGAGGTGGTAGTTGTGTTGAGGTTGATAGTCTGCCCCAGTGAGACAAAGGGGGATTATGTACCTGCACAAGCTCCGACGCTCAAAGTTAAGTTCTTAGCTTTTCCTCCGTCAAGTAAATGGCTATATCATAAATTCGAACTTTACAAGCCTGTTGAAGCTTTCCTAGCACCTGCCCCTCGAAAGTGGTCATTTTCCTCTAGGGATAATCCATCGATCTCGGGTGATTTCAATATGCAATCATTTGTAGCCCTTCCGGAGACGCAATTGTGA

Protein sequence

>MsG0280011287.01.T01

MDKELQLCSVDAADEEEMVSQQKPQRSKGGLVTMPFIIANEALARMASAGLGPNMILYLMDLTPSSCYSYSDTSHILCSWKFHTCCCCFYCRFYIGRFLGVGIGSIISFLGMSMLWLTAMIPATQPPTCSNPPEGCISAKPGQMAMLLSALILIGIGNGGISCSLAFGADQVKEKKIPITIELWKYSSLVAAIFESIRRKKAIQAGFLNNTHGVLKMSAMWLAPSLCLAGIAEAFNVIGQNEFYYKEFPKTMSSVSSALSGLAMAAGNLVSSFVFSTIENTTSSGGKDGWAYGPTADQVSKVSEENGSKEENSTEFKNVNPQIDDKVSDETSSKEKELTEFKNGGQRMIEMLGSATCWGRSTGLSAVCLTQPSWDEVVVVLRLIVCPSETKGDYVPAQAPTLKVKFLAFPPSSKWLYHKFELYKPVEAFLAPAPRKWSFSSRDNPSISGDFNMQSFVALPETQL*