AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041250.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041250.01.T01 MTR_7g107580 97.494 439 4 2 1 438 1 433 0.0 872
MsG0780041250.01.T01 MTR_7g107580 97.273 440 4 3 1 438 1 434 0.0 867
MsG0780041250.01.T01 MTR_7g107580 99.714 350 1 0 1 350 1 350 0.0 722
MsG0780041250.01.T01 MTR_4g122650 49.153 177 87 1 16 189 88 264 5.32e-53 189
MsG0780041250.01.T01 MTR_7g109810 30.698 215 127 2 16 213 74 283 5.26e-29 117
MsG0780041250.01.T01 MTR_7g109810 32.632 190 106 2 16 188 74 258 3.86e-28 113
MsG0780041250.01.T01 MTR_7g109810 33.158 190 105 3 16 188 74 258 6.80e-28 115
MsG0780041250.01.T01 MTR_4g085540 29.123 285 164 10 4 269 206 471 3.32e-17 84.3
MsG0780041250.01.T01 MTR_6g004810 26.042 192 116 5 3 177 24 206 2.57e-15 77.8
MsG0780041250.01.T01 MTR_1g097440 26.613 372 204 17 5 319 197 556 1.18e-14 76.6
MsG0780041250.01.T01 MTR_3g065190 26.016 246 160 8 6 244 16 246 4.75e-14 73.9
MsG0780041250.01.T01 MTR_3g101370 24.615 260 156 8 4 246 175 411 3.84e-13 71.2
MsG0780041250.01.T01 MTR_1g019150 27.099 262 163 7 18 262 213 463 4.59e-12 68.6
MsG0780041250.01.T01 MTR_2g026180 23.345 287 165 8 17 274 5 265 7.02e-12 67.4
MsG0780041250.01.T01 MTR_3g082650 25.731 171 107 5 17 177 19 179 1.28e-11 66.2
MsG0780041250.01.T01 MTR_6g040190 25.763 295 179 10 18 277 202 491 2.11e-11 66.2
MsG0780041250.01.T01 MTR_7g118120 26.316 171 112 5 17 183 105 265 4.92e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041250.01.T01 AT4G03110 67.277 437 109 11 15 437 17 433 0.0 549
MsG0780041250.01.T01 AT1G03457 64.665 433 120 11 7 432 3 409 0.0 530
MsG0780041250.01.T01 AT1G03457 63.348 442 120 12 7 432 3 418 0.0 522
MsG0780041250.01.T01 AT4G03110 66.334 401 102 10 15 402 17 397 1.03e-176 501
MsG0780041250.01.T01 AT4G03110 66.418 402 101 11 15 402 17 398 1.35e-175 498
MsG0780041250.01.T01 AT1G03457 60.909 330 96 11 110 432 1 304 2.52e-121 356
MsG0780041250.01.T01 AT4G16280 44.505 182 98 1 10 188 114 295 9.79e-51 180
MsG0780041250.01.T01 AT4G16280 44.505 182 98 1 10 188 39 220 8.55e-50 179
MsG0780041250.01.T01 AT4G16280 44.505 182 98 1 10 188 114 295 1.56e-49 180
MsG0780041250.01.T01 AT2G47310 33.149 181 112 1 17 188 111 291 3.03e-27 114
MsG0780041250.01.T01 AT4G34110 27.798 277 167 10 5 262 204 466 2.48e-16 81.6
MsG0780041250.01.T01 AT1G71770 26.978 278 150 10 18 249 241 511 1.66e-14 76.3
MsG0780041250.01.T01 AT1G71770 26.978 278 150 10 18 249 241 511 1.66e-14 76.3
MsG0780041250.01.T01 AT4G00830 26.901 171 111 5 17 183 117 277 4.92e-14 74.3
MsG0780041250.01.T01 AT4G00830 27.485 171 110 5 17 183 117 277 5.48e-14 74.3
MsG0780041250.01.T01 AT4G00830 27.485 171 110 5 17 183 117 277 5.48e-14 74.3
MsG0780041250.01.T01 AT4G00830 27.485 171 110 5 17 183 117 277 5.48e-14 74.3
MsG0780041250.01.T01 AT5G47620 26.378 254 157 10 14 252 4 242 6.53e-14 73.6
MsG0780041250.01.T01 AT5G47620 26.378 254 157 10 14 252 4 242 6.53e-14 73.6
MsG0780041250.01.T01 AT5G47620 26.378 254 157 10 14 252 4 242 6.53e-14 73.6
MsG0780041250.01.T01 AT2G18510 26.754 228 153 8 6 226 16 236 5.97e-13 70.5
MsG0780041250.01.T01 AT4G00830 27.976 168 105 4 17 183 117 269 1.39e-12 69.7
MsG0780041250.01.T01 AT4G00830 27.976 168 105 4 17 183 117 269 1.39e-12 69.7
MsG0780041250.01.T01 AT2G23350 26.453 344 208 16 1 323 210 529 5.42e-12 68.2
MsG0780041250.01.T01 AT1G49760 24.631 203 132 6 18 203 226 424 1.92e-11 66.6
MsG0780041250.01.T01 AT1G49760 24.631 203 132 6 18 203 226 424 1.92e-11 66.6
MsG0780041250.01.T01 AT5G40490 27.485 171 104 5 17 177 43 203 3.99e-11 65.1
MsG0780041250.01.T01 AT5G50250 24.865 185 121 5 14 186 111 289 9.31e-11 63.2

Find 123 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAGCATCCTTCATTATT+TGG 0.145202 7:-88802409 MsG0780041250.01.T01:CDS
CTTTCTCTTTCTCTCTCTTT+TGG 0.165519 7:+88805779 None:intergenic
ACGATGAATTATGGCGAATT+TGG 0.213680 7:+88805802 None:intergenic
TCTTTCTTCTTTCTGAGATT+TGG 0.230145 7:+88805708 None:intergenic
TTAATTTCTTACCTCCTAAT+TGG 0.238990 7:+88801085 None:intergenic
TTTCTTTACACGAAACTTCT+TGG 0.252350 7:-88805662 MsG0780041250.01.T01:five_prime_UTR
TATCACATACCTCAAGAATT+TGG 0.267175 7:-88801343 MsG0780041250.01.T01:CDS
CCTGGTTCTGTTTCACCTTC+CGG 0.267526 7:-88801902 MsG0780041250.01.T01:CDS
CTTCTTGGACTCGACATTAA+TGG 0.267985 7:-88805647 MsG0780041250.01.T01:exon
ATAGCAGATTGAGCAGCTTC+TGG 0.275678 7:+88801126 None:intergenic
TCAACTTCAGAAATGTTCTT+TGG 0.277981 7:+88803998 None:intergenic
CTGTGCTTTCTGAGCTCTTC+GGG 0.289780 7:+88802459 None:intergenic
CTCCAAGTATGGAACTATAA+AGG 0.292179 7:-88803960 MsG0780041250.01.T01:CDS
AGAACAAGCTCTTGCTGCTT+TGG 0.295520 7:-88803764 MsG0780041250.01.T01:CDS
ACACGCATTAACGGCCTTAT+CGG 0.303507 7:+88805308 None:intergenic
ATTAGGAGGTAAGAAATTAA+AGG 0.309794 7:-88801082 MsG0780041250.01.T01:CDS
GGCTCTTATCCTGCTGTGCC+AGG 0.318239 7:-88801986 MsG0780041250.01.T01:CDS
TAGTTTCTAGGATTCATATT+GGG 0.327152 7:+88802034 None:intergenic
ATGATGAATGGATGCCAATT+AGG 0.329590 7:-88801099 MsG0780041250.01.T01:CDS
GGCAACTCCGCTACATCATC+AGG 0.339581 7:-88801872 MsG0780041250.01.T01:CDS
AGCAGCAAGAGCTTGTTCTT+TGG 0.340647 7:+88803768 None:intergenic
TGTTCATCAGTAAGGTTTAC+CGG 0.346110 7:+88801035 None:intergenic
GTTCCTCCATATAACGGTTA+TGG 0.352351 7:-88802367 MsG0780041250.01.T01:CDS
TGATAGGCTCCTGGAAGTTA+TGG 0.362020 7:-88802160 MsG0780041250.01.T01:intron
TGATAGCCATAACCGTTATA+TGG 0.365595 7:+88802361 None:intergenic
GGAGGCACATGATAGTTTCT+AGG 0.370299 7:+88802022 None:intergenic
ATATAACGGTTATGGCTATC+AGG 0.373888 7:-88802359 MsG0780041250.01.T01:intron
GTTTCACCTTCCGGTGGAAA+TGG 0.379419 7:-88801893 MsG0780041250.01.T01:CDS
TTCATATTGGGGCCGAGATC+TGG 0.379609 7:+88802046 None:intergenic
GCTAATGCCTTTCAACCATT+TGG 0.382505 7:-88801307 MsG0780041250.01.T01:CDS
CTTATTGTGACACGCATTAA+CGG 0.390856 7:+88805299 None:intergenic
ATCCTTTATAGTTCCATACT+TGG 0.391509 7:+88803958 None:intergenic
ACTGTGCTTTCTGAGCTCTT+CGG 0.392609 7:+88802458 None:intergenic
TCATCTTCCGTCATGTGTTT+CGG 0.395974 7:+88805559 None:intergenic
TCAGAACACAAACTCTTCAT+TGG 0.399593 7:-88804028 MsG0780041250.01.T01:intron
ATTGTTTGTGTTCATCAGTA+AGG 0.400663 7:+88801027 None:intergenic
GTGTTCCCTTAGTTGTCAAA+TGG 0.401234 7:-88802507 MsG0780041250.01.T01:CDS
ATAGTTTCTAGGATTCATAT+TGG 0.403096 7:+88802033 None:intergenic
AATCAATGGAAAGCACAAAA+TGG 0.410828 7:-88803737 MsG0780041250.01.T01:CDS
GATAGGCTCCTGGAAGTTAT+GGG 0.413886 7:-88802159 MsG0780041250.01.T01:intron
TAAGAGCCAACATAACTTGC+AGG 0.416204 7:+88802001 None:intergenic
TCACAATAAGAAAACATTAC+CGG 0.421330 7:-88805286 MsG0780041250.01.T01:CDS
GGCATGAGCCCATAACTTCC+AGG 0.430186 7:+88802151 None:intergenic
TAGCAGATTGAGCAGCTTCT+GGG 0.433513 7:+88801127 None:intergenic
ATTATTTGGAGCCATGCCTA+TGG 0.433566 7:-88802395 MsG0780041250.01.T01:CDS
ACAAGCTCTTGCTGCTTTGG+AGG 0.434947 7:-88803761 MsG0780041250.01.T01:CDS
AATTAAAGGTTCAGCATAAG+AGG 0.436395 7:-88801068 MsG0780041250.01.T01:CDS
CCAGGTTGATTCTGCATTGG+TGG 0.451380 7:+88802115 None:intergenic
TTATCGGCTTCATCTCTAGA+AGG 0.468242 7:+88805324 None:intergenic
ATCAGCCCATTTGACAACTA+AGG 0.471151 7:+88802501 None:intergenic
TGTTGTAACCCTGGCACAGC+AGG 0.473768 7:+88801977 None:intergenic
GCTGCTTTGGAGGCAATCAA+TGG 0.477211 7:-88803751 MsG0780041250.01.T01:CDS
TTCTAGAGATGAAGCCGATA+AGG 0.478824 7:-88805322 MsG0780041250.01.T01:CDS
GCACTCAAAACTCTACCAAA+TGG 0.487510 7:+88801292 None:intergenic
CACAATAAGAAAACATTACC+GGG 0.488544 7:-88805285 MsG0780041250.01.T01:CDS
AATGCATTGCGGCCAGATCT+CGG 0.489842 7:-88802058 MsG0780041250.01.T01:CDS
GGTTATGTTCCTCCATATAA+CGG 0.491884 7:-88802373 MsG0780041250.01.T01:CDS
CAAATGGGCTGATACTGAAA+AGG 0.494167 7:-88802491 MsG0780041250.01.T01:CDS
TGTTCCCTTAGTTGTCAAAT+GGG 0.495874 7:-88802506 MsG0780041250.01.T01:CDS
GTGCCTCCTGCAAGTTATGT+TGG 0.499189 7:-88802007 MsG0780041250.01.T01:CDS
GGAGGACTATTCAAAGGTCT+TGG 0.500082 7:+88801923 None:intergenic
GCTCTTATCCTGCTGTGCCA+GGG 0.508282 7:-88801985 MsG0780041250.01.T01:CDS
GGTTGATTCTGCATTGGTGG+CGG 0.512156 7:+88802118 None:intergenic
ATGATGCCTCACATGAATCA+AGG 0.516257 7:-88802082 MsG0780041250.01.T01:CDS
CAACATCCAATGGCATATCC+TGG 0.520136 7:-88801959 MsG0780041250.01.T01:CDS
AACTCTACCAAATGGTTGAA+AGG 0.528070 7:+88801300 None:intergenic
AGTTTCTAGGATTCATATTG+GGG 0.528224 7:+88802035 None:intergenic
CATAAGAGGGACAACAAACC+CGG 0.531629 7:-88801054 MsG0780041250.01.T01:CDS
AGACCTTTGAATAGTCCTCC+TGG 0.532938 7:-88801920 MsG0780041250.01.T01:CDS
TCTGCTATTAGTATGATGAA+TGG 0.533660 7:-88801111 MsG0780041250.01.T01:CDS
TCTGGTGGTGGTCAAGCTGA+AGG 0.536580 7:-88801836 MsG0780041250.01.T01:CDS
GACATTAATGGCGGAAACAA+AGG 0.537761 7:-88805635 MsG0780041250.01.T01:exon
AGCGGAGTTGCCATTTCCAC+CGG 0.538304 7:+88801883 None:intergenic
GGTTCTCAACAGACAAGTAA+AGG 0.545378 7:-88803920 MsG0780041250.01.T01:intron
TTATTTGGAGCCATGCCTAT+GGG 0.546418 7:-88802394 MsG0780041250.01.T01:CDS
CCACCAATGCAGAATCAACC+TGG 0.548396 7:-88802115 MsG0780041250.01.T01:CDS
ATAGCAAATTCTTTGAACAA+TGG 0.550820 7:+88805529 None:intergenic
ATTGGTGGCGGCATGCGGTA+CGG 0.551343 7:+88802130 None:intergenic
TAACCAGGTTGATTCTGCAT+TGG 0.557945 7:+88802112 None:intergenic
TCTTGATCTCCAAATTCTTG+AGG 0.562460 7:+88801334 None:intergenic
GGCATGGCTCCAAATAATGA+AGG 0.562854 7:+88802400 None:intergenic
GAAGTATGCAGATGGCGAGT+TGG 0.566206 7:-88804195 MsG0780041250.01.T01:CDS
TCTGCATACTTCACTTGCAA+TGG 0.570290 7:+88804206 None:intergenic
ATTCCTCCAGGATATGCCAT+TGG 0.572038 7:+88801953 None:intergenic
CCGGAAGGTGAAACAGAACC+AGG 0.575325 7:+88801902 None:intergenic
GGCATCATATTGTGGTAACC+AGG 0.578815 7:+88802097 None:intergenic
GGTTCTGTTTCACCTTCCGG+TGG 0.581373 7:-88801899 MsG0780041250.01.T01:CDS
CTTGGACTAATCATTCCTCC+AGG 0.583450 7:+88801941 None:intergenic
GATGGCGAGTTGGAAAGATT+AGG 0.585947 7:-88804185 MsG0780041250.01.T01:intron
TCAGCCCATTTGACAACTAA+GGG 0.587954 7:+88802502 None:intergenic
AAAGCTACACGCGCTTCTCG+AGG 0.592067 7:-88805478 MsG0780041250.01.T01:intron
ACAGTCTCAAGCTTCTAATG+TGG 0.599106 7:-88802440 MsG0780041250.01.T01:CDS
GCCAGGGTTACAACATCCAA+TGG 0.600312 7:-88801969 MsG0780041250.01.T01:CDS
CAGTCTCAAGCTTCTAATGT+GGG 0.603411 7:-88802439 MsG0780041250.01.T01:CDS
TAGATAAACAGATTTGCGCC+AGG 0.605436 7:+88801364 None:intergenic
ATTAAAGGTTCAGCATAAGA+GGG 0.606375 7:-88801067 MsG0780041250.01.T01:CDS
GTTCATCAGTAAGGTTTACC+GGG 0.607881 7:+88801036 None:intergenic
AGCAGATTGAGCAGCTTCTG+GGG 0.608016 7:+88801128 None:intergenic
GAAAGTGTGAAATTGTTCGT+AGG 0.610831 7:-88805589 MsG0780041250.01.T01:CDS
TCTGCATTGGTGGCGGCATG+CGG 0.611389 7:+88802125 None:intergenic
ATGAATGGATGCCAATTAGG+AGG 0.617833 7:-88801096 MsG0780041250.01.T01:CDS
GCCATTGGATGTTGTAACCC+TGG 0.618480 7:+88801968 None:intergenic
GCATTTCCTTGATTCATGTG+AGG 0.618490 7:+88802076 None:intergenic
TTGCAAGTGAAGTATGCAGA+TGG 0.626113 7:-88804203 MsG0780041250.01.T01:CDS
TATGGAGGAACATAACCCAT+AGG 0.632075 7:+88802379 None:intergenic
CAATGGAAAGCACAAAATGG+AGG 0.634591 7:-88803734 MsG0780041250.01.T01:intron
GAACCAGGAGGACTATTCAA+AGG 0.637034 7:+88801917 None:intergenic
TCATGTGAGGCATCATATTG+TGG 0.649926 7:+88802089 None:intergenic
GAGTTGCCATTTCCACCGGA+AGG 0.654667 7:+88801887 None:intergenic
GCAACTCCGCTACATCATCA+GGG 0.663111 7:-88801871 MsG0780041250.01.T01:CDS
CTTGGACTCGACATTAATGG+CGG 0.668095 7:-88805644 MsG0780041250.01.T01:exon
GCTGGACCCTGATGATGTAG+CGG 0.669272 7:+88801865 None:intergenic
AGGAACATAACCCATAGGCA+TGG 0.673621 7:+88802384 None:intergenic
TAGCCATAACCGTTATATGG+AGG 0.682373 7:+88802364 None:intergenic
GTCGTCGATGCAAATTGACA+AGG 0.687287 7:+88805748 None:intergenic
TGAATCAAGGAAATGCATTG+CGG 0.688594 7:-88802069 MsG0780041250.01.T01:CDS
TCAAGTACCGAAACACATGA+CGG 0.692471 7:-88805566 MsG0780041250.01.T01:CDS
ATAAACAGATTTGCGCCAGG+TGG 0.694236 7:+88801367 None:intergenic
ACAATAAGAAAACATTACCG+GGG 0.696985 7:-88805284 MsG0780041250.01.T01:CDS
GAGCCAACATAACTTGCAGG+AGG 0.697782 7:+88802004 None:intergenic
CAATAAGAAAACATTACCGG+GGG 0.709469 7:-88805283 MsG0780041250.01.T01:intron
CATCCAATGGCATATCCTGG+AGG 0.717452 7:-88801956 MsG0780041250.01.T01:CDS
GAAGGTGAAACAGAACCAGG+AGG 0.777635 7:+88801905 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCAATTATGTAATTAT+TGG - Chr7:88802167-88802186 MsG0780041250.01.T01:intron 10.0%
!! GTCATATAAATAATTATTAA+CGG + Chr7:88803835-88803854 None:intergenic 10.0%
!! TCATATAAATAATTATTAAC+GGG + Chr7:88803834-88803853 None:intergenic 10.0%
!! TTAATAATTATTTATATGAC+AGG - Chr7:88803835-88803854 MsG0780041250.01.T01:intron 10.0%
!!! GTAATATAATGTATTTTATA+TGG - Chr7:88803218-88803237 MsG0780041250.01.T01:intron 10.0%
!! AAAAAAAAAACACGAAAATT+AGG + Chr7:88801479-88801498 None:intergenic 15.0%
!! AATAATGATACAAAATAATG+TGG + Chr7:88802569-88802588 None:intergenic 15.0%
!! ATTTCTATAATTAAGTTTAG+TGG - Chr7:88802198-88802217 MsG0780041250.01.T01:intron 15.0%
!! CATGTTGATATATTTATATT+CGG - Chr7:88805086-88805105 MsG0780041250.01.T01:intron 15.0%
!! CTGATAATAATTTAAGAAAA+TGG - Chr7:88801942-88801961 MsG0780041250.01.T01:CDS 15.0%
!! GGAATAAAATTTAAAAATTC+AGG + Chr7:88803163-88803182 None:intergenic 15.0%
!! TAATAATTTAAGAAAATGGA+CGG - Chr7:88801946-88801965 MsG0780041250.01.T01:CDS 15.0%
!! TCATATGAATTGAATAAAAA+CGG + Chr7:88801642-88801661 None:intergenic 15.0%
!!! AATTTTAGCAATTTATGTTT+TGG - Chr7:88801764-88801783 MsG0780041250.01.T01:intron 15.0%
!!! ATATTACTATATTTTCACTT+AGG - Chr7:88805458-88805477 MsG0780041250.01.T01:intron 15.0%
!!! TTATTCCTATTTTTCATTTT+TGG - Chr7:88803176-88803195 MsG0780041250.01.T01:intron 15.0%
!! AAAATTGAAATAACAATTGC+AGG + Chr7:88803725-88803744 None:intergenic 20.0%
!! AAATTTAAAAATTCAGGTGA+TGG + Chr7:88803157-88803176 None:intergenic 20.0%
!! AATAAGTTAAAGGACTAAAA+AGG + Chr7:88805120-88805139 None:intergenic 20.0%
!! AATAATTTAAGAAAATGGAC+GGG - Chr7:88801947-88801966 MsG0780041250.01.T01:CDS 20.0%
!! AGATAATTACTTATGAAAGA+AGG + Chr7:88802788-88802807 None:intergenic 20.0%
!! ATTATATTACACAATTAACC+TGG + Chr7:88803208-88803227 None:intergenic 20.0%
!! ATTATTATCAGTGTCATATA+TGG + Chr7:88801933-88801952 None:intergenic 20.0%
!! ATTCATTCTTTATTCTTTCT+AGG - Chr7:88802970-88802989 MsG0780041250.01.T01:intron 20.0%
!! CATTAGTGACATAATTAAAA+TGG + Chr7:88802395-88802414 None:intergenic 20.0%
!! CTTATTAGTAATGAATTTGA+TGG - Chr7:88805637-88805656 MsG0780041250.01.T01:exon 20.0%
!! TACTACCAAAAATGAAAAAT+AGG + Chr7:88803184-88803203 None:intergenic 20.0%
!! TAGTAATATTTATCGTTGTA+AGG + Chr7:88805447-88805466 None:intergenic 20.0%
!!! AAAATGTGATGATTTTTGAA+TGG + Chr7:88804597-88804616 None:intergenic 20.0%
!!! AAGGATTTACAAATTTTAAG+AGG - Chr7:88802908-88802927 MsG0780041250.01.T01:intron 20.0%
!!! ATCTCTAAAATGAGTAAATT+TGG + Chr7:88805346-88805365 None:intergenic 20.0%
!!! ATGTTTTTTGTTTCTAATTC+AGG - Chr7:88802612-88802631 MsG0780041250.01.T01:intron 20.0%
!!! CATCTTGTATTTAAAATGAT+TGG + Chr7:88803350-88803369 None:intergenic 20.0%
!!! GTTACAATTTTAGTTGTAAA+TGG - Chr7:88803603-88803622 MsG0780041250.01.T01:intron 20.0%
!!! TAAAGCCTTAAATACATTTT+TGG + Chr7:88805405-88805424 None:intergenic 20.0%
!!! TCATTTTAAATACAAGATGA+AGG - Chr7:88803351-88803370 MsG0780041250.01.T01:intron 20.0%
!!! TTCGTGTTTTTTTTTTTTGT+AGG - Chr7:88801483-88801502 MsG0780041250.01.T01:intron 20.0%
! AATGATAATAAATGACTTCC+AGG + Chr7:88804220-88804239 None:intergenic 25.0%
! ACTACTATTTAGCAATATAG+TGG - Chr7:88803430-88803449 MsG0780041250.01.T01:intron 25.0%
! AGTTAACGTAATTCATTCAT+AGG + Chr7:88802347-88802366 None:intergenic 25.0%
! ATAATTTAAGAAAATGGACG+GGG - Chr7:88801948-88801967 MsG0780041250.01.T01:CDS 25.0%
! ATAGCAAATTCTTTGAACAA+TGG + Chr7:88801323-88801342 None:intergenic 25.0%
! ATATTTGTATCACAACTACT+TGG + Chr7:88802448-88802467 None:intergenic 25.0%
! ATTAGGAGGTAAGAAATTAA+AGG - Chr7:88805767-88805786 MsG0780041250.01.T01:five_prime_UTR 25.0%
! CATTATTCTTCATTCAGATT+GGG - Chr7:88802582-88802601 MsG0780041250.01.T01:intron 25.0%
! GAACCTCAAAAATAAGTTAA+AGG + Chr7:88805130-88805149 None:intergenic 25.0%
! GCATGTCATTGATATAAAAA+TGG + Chr7:88802766-88802785 None:intergenic 25.0%
! GGAAGTCATTTATTATCATT+TGG - Chr7:88804220-88804239 MsG0780041250.01.T01:intron 25.0%
! GTTCATCAAAATAACAAACT+TGG + Chr7:88802035-88802054 None:intergenic 25.0%
! GTTTAGGGAAATAGTAATAA+AGG + Chr7:88805289-88805308 None:intergenic 25.0%
! TAATTCATTCATAGGTTACT+TGG + Chr7:88802339-88802358 None:intergenic 25.0%
! TACAACTAAAATTGTAACTG+AGG + Chr7:88803601-88803620 None:intergenic 25.0%
! TAGTAGATTTGAAGAATTAG+CGG + Chr7:88801437-88801456 None:intergenic 25.0%
! TATGAATGAATTACGTTAAC+TGG - Chr7:88802346-88802365 MsG0780041250.01.T01:intron 25.0%
! TCAAAATGTTCAATAGTATC+CGG + Chr7:88802481-88802500 None:intergenic 25.0%
! TCACAATAAGAAAACATTAC+CGG - Chr7:88801563-88801582 MsG0780041250.01.T01:intron 25.0%
! TCATTATTCTTCATTCAGAT+TGG - Chr7:88802581-88802600 MsG0780041250.01.T01:intron 25.0%
! TCATTCTATACAGAAATAGA+AGG - Chr7:88803276-88803295 MsG0780041250.01.T01:intron 25.0%
! TCTATAATTAAGTTTAGTGG+CGG - Chr7:88802201-88802220 MsG0780041250.01.T01:intron 25.0%
! TTAATTTCTTACCTCCTAAT+TGG + Chr7:88805767-88805786 None:intergenic 25.0%
! TTATTACTATTTCCCTAAAC+TGG - Chr7:88805289-88805308 MsG0780041250.01.T01:CDS 25.0%
!! GACATTAATTTTCTCTTGAT+AGG - Chr7:88804673-88804692 MsG0780041250.01.T01:intron 25.0%
!! TCTTTATTCTTTCTAGGTTT+TGG - Chr7:88802976-88802995 MsG0780041250.01.T01:intron 25.0%
!! TGCGTTTCATTGAAATTTTT+GGG - Chr7:88802304-88802323 MsG0780041250.01.T01:intron 25.0%
!! TTAGATAGATAACATGCTTT+TGG - Chr7:88803535-88803554 MsG0780041250.01.T01:intron 25.0%
!! TTATGCTGTTTAATTCAATG+TGG - Chr7:88801614-88801633 MsG0780041250.01.T01:intron 25.0%
!! TTGCGTTTCATTGAAATTTT+TGG - Chr7:88802303-88802322 MsG0780041250.01.T01:intron 25.0%
!!! AAGTAAAGGTGCTTATTTTA+CGG - Chr7:88802943-88802962 MsG0780041250.01.T01:intron 25.0%
!!! AGATTTGGTTTTTCGTAATT+TGG + Chr7:88801129-88801148 None:intergenic 25.0%
!!! AGTCCTTTAACTTATTTTTG+AGG - Chr7:88805124-88805143 MsG0780041250.01.T01:intron 25.0%
!!! ATAGACTCATTTTAGAGTTA+AGG + Chr7:88805162-88805181 None:intergenic 25.0%
!!! ATAGTTTCTAGGATTCATAT+TGG + Chr7:88804819-88804838 None:intergenic 25.0%
!!! ATTTGGTTTTTCGTAATTTG+GGG + Chr7:88801127-88801146 None:intergenic 25.0%
!!! CTTATTTTTGAGGTTCAATT+TGG - Chr7:88805134-88805153 MsG0780041250.01.T01:intron 25.0%
!!! GATTTGGTTTTTCGTAATTT+GGG + Chr7:88801128-88801147 None:intergenic 25.0%
!!! TAGACTCATTTTAGAGTTAA+GGG + Chr7:88805161-88805180 None:intergenic 25.0%
!!! TAGTTTCTAGGATTCATATT+GGG + Chr7:88804818-88804837 None:intergenic 25.0%
AAAATTGTAACTGAGGTTGA+AGG + Chr7:88803594-88803613 None:intergenic 30.0%
AAATGACCAACTTGTGTTAA+CGG + Chr7:88805204-88805223 None:intergenic 30.0%
AAATGGTCTTTGCAGTATAT+TGG - Chr7:88803620-88803639 MsG0780041250.01.T01:intron 30.0%
AACCAAAAATGTGAAACACT+AGG + Chr7:88801862-88801881 None:intergenic 30.0%
AATTAAAGGTTCAGCATAAG+AGG - Chr7:88805781-88805800 MsG0780041250.01.T01:five_prime_UTR 30.0%
ACAATAAGAAAACATTACCG+GGG - Chr7:88801565-88801584 MsG0780041250.01.T01:intron 30.0%
ACACACATGACAAAATTTGA+CGG - Chr7:88804257-88804276 MsG0780041250.01.T01:intron 30.0%
ACCAAAAATGTGAAACACTA+GGG + Chr7:88801861-88801880 None:intergenic 30.0%
AGGGACCAAAAATGTATTTA+AGG - Chr7:88805397-88805416 MsG0780041250.01.T01:intron 30.0%
ATCCTTTATAGTTCCATACT+TGG + Chr7:88802894-88802913 None:intergenic 30.0%
ATTAAAGGTTCAGCATAAGA+GGG - Chr7:88805782-88805801 MsG0780041250.01.T01:five_prime_UTR 30.0%
ATTCAGTCACAAAATCTTGT+TGG - Chr7:88803656-88803675 MsG0780041250.01.T01:intron 30.0%
ATTGAACAGATAAGGATGAT+TGG - Chr7:88802070-88802089 MsG0780041250.01.T01:CDS 30.0%
CACAATAAGAAAACATTACC+GGG - Chr7:88801564-88801583 MsG0780041250.01.T01:intron 30.0%
GATATATGCTGTCATGTATA+GGG - Chr7:88804314-88804333 MsG0780041250.01.T01:intron 30.0%
GATGCATTATTGAACAGATA+AGG - Chr7:88802062-88802081 MsG0780041250.01.T01:CDS 30.0%
TACAAATATGCCTAAAAAGC+CGG - Chr7:88802459-88802478 MsG0780041250.01.T01:CDS 30.0%
TAGTAATAAAGGCTTAGCTT+TGG + Chr7:88805278-88805297 None:intergenic 30.0%
TATCACATACCTCAAGAATT+TGG - Chr7:88805506-88805525 MsG0780041250.01.T01:CDS 30.0%
TCAACTTCAGAAATGTTCTT+TGG + Chr7:88802854-88802873 None:intergenic 30.0%
TCACTTGCAATGTTTGATAA+CGG + Chr7:88805323-88805342 None:intergenic 30.0%
TCTGCTATTAGTATGATGAA+TGG - Chr7:88805738-88805757 MsG0780041250.01.T01:five_prime_UTR 30.0%
TGATATATGCTGTCATGTAT+AGG - Chr7:88804313-88804332 MsG0780041250.01.T01:intron 30.0%
TGCAAACACAAGACAAAAAA+AGG + Chr7:88804194-88804213 None:intergenic 30.0%
TTCATTACTAATAAGAGCAG+AGG + Chr7:88805632-88805651 None:intergenic 30.0%
TTCCTTAATCACAATTCACA+AGG - Chr7:88803001-88803020 MsG0780041250.01.T01:intron 30.0%
TTTCTTTACACGAAACTTCT+TGG - Chr7:88801187-88801206 MsG0780041250.01.T01:intron 30.0%
! AATCAATGGAAAGCACAAAA+TGG - Chr7:88803112-88803131 MsG0780041250.01.T01:intron 30.0%
! AGCATCTGATCAGTAATTTT+GGG + Chr7:88804155-88804174 None:intergenic 30.0%
! AGGGAAAATAATTTGTGCTT+GGG + Chr7:88804113-88804132 None:intergenic 30.0%
! ATTATTAACGGGTAAAACCT+AGG + Chr7:88803823-88803842 None:intergenic 30.0%
! GAACACTATTTTCTTTGACA+AGG + Chr7:88802132-88802151 None:intergenic 30.0%
! TAGCATCTGATCAGTAATTT+TGG + Chr7:88804156-88804175 None:intergenic 30.0%
!! AGTTTCTAGGATTCATATTG+GGG + Chr7:88804817-88804836 None:intergenic 30.0%
!! TCTTTCTTCTTTCTGAGATT+TGG + Chr7:88801144-88801163 None:intergenic 30.0%
!!! TGAATTTGATGGATTTTGTG+TGG - Chr7:88805648-88805667 MsG0780041250.01.T01:exon 30.0%
!!! TGGTGCTTATTGCTATTTTT+GGG - Chr7:88801784-88801803 MsG0780041250.01.T01:intron 30.0%
!!! TTGGTGCTTATTGCTATTTT+TGG - Chr7:88801783-88801802 MsG0780041250.01.T01:intron 30.0%
!!! TTTGGTTTTTCGTAATTTGG+GGG + Chr7:88801126-88801145 None:intergenic 30.0%
AACTCTACCAAATGGTTGAA+AGG + Chr7:88805552-88805571 None:intergenic 35.0%
AACTTGATCCAAGTTTGGAA+AGG - Chr7:88803862-88803881 MsG0780041250.01.T01:intron 35.0%
AATGAATTACGTTAACTGGC+AGG - Chr7:88802350-88802369 MsG0780041250.01.T01:intron 35.0%
ACCAAACCGAACCTTAAATT+AGG - Chr7:88805371-88805390 MsG0780041250.01.T01:intron 35.0%
ACGATGAATTATGGCGAATT+TGG + Chr7:88801050-88801069 None:intergenic 35.0%
ACTTGATCCAAGTTTGGAAA+GGG - Chr7:88803863-88803882 MsG0780041250.01.T01:intron 35.0%
AGCCATCCAAAAAGAATAAG+CGG + Chr7:88803322-88803341 None:intergenic 35.0%
AGCTGAATAAATCTCAAGAC+TGG - Chr7:88803940-88803959 MsG0780041250.01.T01:CDS 35.0%
AGTGATGAAAGCTATAAGAG+TGG + Chr7:88801814-88801833 None:intergenic 35.0%
ATACAGAAATAGAAGGCAAG+TGG - Chr7:88803283-88803302 MsG0780041250.01.T01:intron 35.0%
ATATAACGGTTATGGCTATC+AGG - Chr7:88804490-88804509 MsG0780041250.01.T01:intron 35.0%
ATGATGAATGGATGCCAATT+AGG - Chr7:88805750-88805769 MsG0780041250.01.T01:five_prime_UTR 35.0%
ATGTGAAACACTAGGGTATA+TGG + Chr7:88801854-88801873 None:intergenic 35.0%
CAAAATGGAAACCTAATGGT+GGG - Chr7:88803757-88803776 MsG0780041250.01.T01:CDS 35.0%
CAATAAGAAAACATTACCGG+GGG - Chr7:88801566-88801585 MsG0780041250.01.T01:intron 35.0%
CGAACCTTAAATTAGGCTAA+GGG - Chr7:88805378-88805397 MsG0780041250.01.T01:intron 35.0%
CTCCAAGTATGGAACTATAA+AGG - Chr7:88802889-88802908 MsG0780041250.01.T01:intron 35.0%
CTTATTGTGACACGCATTAA+CGG + Chr7:88801553-88801572 None:intergenic 35.0%
GACATAATTAAAATGGAGCG+TGG + Chr7:88802388-88802407 None:intergenic 35.0%
GAGAAGAACTGCATGAATTA+AGG + Chr7:88804560-88804579 None:intergenic 35.0%
GCTGAATAAATCTCAAGACT+GGG - Chr7:88803941-88803960 MsG0780041250.01.T01:CDS 35.0%
GGTTATGTTCCTCCATATAA+CGG - Chr7:88804476-88804495 MsG0780041250.01.T01:intron 35.0%
GTCTCAAAATGGAAACCTAA+TGG - Chr7:88803753-88803772 MsG0780041250.01.T01:CDS 35.0%
GTCTTGAGATTTATTCAGCT+CGG + Chr7:88803940-88803959 None:intergenic 35.0%
GTGATGAAAGCTATAAGAGT+GGG + Chr7:88801813-88801832 None:intergenic 35.0%
TACAGAAATAGAAGGCAAGT+GGG - Chr7:88803284-88803303 MsG0780041250.01.T01:intron 35.0%
TCAAAATGGAAACCTAATGG+TGG - Chr7:88803756-88803775 MsG0780041250.01.T01:CDS 35.0%
TCAGAACACAAACTCTTCAT+TGG - Chr7:88802821-88802840 MsG0780041250.01.T01:intron 35.0%
TCTCAGCATCCTTCATTATT+TGG - Chr7:88804440-88804459 MsG0780041250.01.T01:intron 35.0%
TCTTGAGATTTATTCAGCTC+GGG + Chr7:88803939-88803958 None:intergenic 35.0%
TCTTGATCTCCAAATTCTTG+AGG + Chr7:88805518-88805537 None:intergenic 35.0%
TGAATCAAGGAAATGCATTG+CGG - Chr7:88804780-88804799 MsG0780041250.01.T01:intron 35.0%
TGATAGCCATAACCGTTATA+TGG + Chr7:88804491-88804510 None:intergenic 35.0%
TGTGAAACACTAGGGTATAT+GGG + Chr7:88801853-88801872 None:intergenic 35.0%
TGTTCCCTTAGTTGTCAAAT+GGG - Chr7:88804343-88804362 MsG0780041250.01.T01:intron 35.0%
TTATGTCCGTTAACACAAGT+TGG - Chr7:88805195-88805214 MsG0780041250.01.T01:intron 35.0%
TTCTCTTACCATGTTGTAGT+AGG - Chr7:88803035-88803054 MsG0780041250.01.T01:intron 35.0%
TTTGACGACTTGATTATCCA+AGG - Chr7:88802496-88802515 MsG0780041250.01.T01:CDS 35.0%
TTTGTATCACAACTACTTGG+AGG + Chr7:88802445-88802464 None:intergenic 35.0%
TTTGTATCCCTGTCTCAAAA+TGG - Chr7:88803742-88803761 MsG0780041250.01.T01:CDS 35.0%
! AACCGCTTATTCTTTTTGGA+TGG - Chr7:88803317-88803336 MsG0780041250.01.T01:intron 35.0%
! ACCAAAACATTTGCTAACAC+CGG + Chr7:88805606-88805625 None:intergenic 35.0%
! ACCCTAGTGTTTCACATTTT+TGG - Chr7:88801857-88801876 MsG0780041250.01.T01:CDS 35.0%
! AGCCTTGTGAATTGTGATTA+AGG + Chr7:88803006-88803025 None:intergenic 35.0%
! CCTTAGCCTAATTTAAGGTT+CGG + Chr7:88805380-88805399 None:intergenic 35.0%
! CTCTTTTGGACGATGAATTA+TGG + Chr7:88801059-88801078 None:intergenic 35.0%
! CTTTCTCTTTCTCTCTCTTT+TGG + Chr7:88801073-88801092 None:intergenic 35.0%
! GAAAGTGTGAAATTGTTCGT+AGG - Chr7:88801260-88801279 MsG0780041250.01.T01:intron 35.0%
! GACACAATTGTTGTTACTGT+GGG - Chr7:88802247-88802266 MsG0780041250.01.T01:intron 35.0%
! GAGGGAAAATAATTTGTGCT+TGG + Chr7:88804114-88804133 None:intergenic 35.0%
! GCACAAATTATTTTCCCTCT+TGG - Chr7:88804115-88804134 MsG0780041250.01.T01:intron 35.0%
! GTGTTAACGGACATAACTTA+GGG + Chr7:88805191-88805210 None:intergenic 35.0%
! GTTGAACCGCTTATTCTTTT+TGG - Chr7:88803313-88803332 MsG0780041250.01.T01:intron 35.0%
! GTTTTTGTTGACAAAGCTAC+CGG - Chr7:88805584-88805603 MsG0780041250.01.T01:CDS 35.0%
! TCAATAGTATCCGGCTTTTT+AGG + Chr7:88802472-88802491 None:intergenic 35.0%
! TGACACAATTGTTGTTACTG+TGG - Chr7:88802246-88802265 MsG0780041250.01.T01:intron 35.0%
! TGATTTTCCCTTTCCAAACT+TGG + Chr7:88803873-88803892 None:intergenic 35.0%
! TGTGTTAACGGACATAACTT+AGG + Chr7:88805192-88805211 None:intergenic 35.0%
! TGTTAACGGACATAACTTAG+GGG + Chr7:88805190-88805209 None:intergenic 35.0%
! TGTTTAGAACACTGAAGTGT+TGG - Chr7:88802522-88802541 MsG0780041250.01.T01:intron 35.0%
!! TGTATCGTGTTAGTTCTACT+AGG - Chr7:88802004-88802023 MsG0780041250.01.T01:CDS 35.0%
!!! TAGGTTTCCATTTTGAGACA+GGG + Chr7:88803752-88803771 None:intergenic 35.0%
!!! TTAGGTTTCCATTTTGAGAC+AGG + Chr7:88803753-88803772 None:intergenic 35.0%
!!! TTTCATTTTTGGTAGTAGCC+AGG - Chr7:88803187-88803206 MsG0780041250.01.T01:intron 35.0%
AAAATTACTAAACGCACCCC+CGG + Chr7:88801585-88801604 None:intergenic 40.0%
ACAAACGCAACTTATCATGC+AGG + Chr7:88802418-88802437 None:intergenic 40.0%
ACAGTCTCAAGCTTCTAATG+TGG - Chr7:88804409-88804428 MsG0780041250.01.T01:intron 40.0%
AGAAAATGGACGGGGTTAAA+TGG - Chr7:88801956-88801975 MsG0780041250.01.T01:CDS 40.0%
AGTTGAAACCCTGACTAAGA+TGG - Chr7:88803497-88803516 MsG0780041250.01.T01:intron 40.0%
ATCAGCCCATTTGACAACTA+AGG + Chr7:88804351-88804370 None:intergenic 40.0%
ATGAATGGATGCCAATTAGG+AGG - Chr7:88805753-88805772 MsG0780041250.01.T01:five_prime_UTR 40.0%
ATGATGCCTCACATGAATCA+AGG - Chr7:88804767-88804786 MsG0780041250.01.T01:intron 40.0%
ATGCACAACCTACTACAACA+TGG + Chr7:88803046-88803065 None:intergenic 40.0%
CAGTATATTGGACCTTCAAG+CGG - Chr7:88803632-88803651 MsG0780041250.01.T01:intron 40.0%
CAGTCTCAAGCTTCTAATGT+GGG - Chr7:88804410-88804429 MsG0780041250.01.T01:intron 40.0%
CCGAACCTTAAATTAGGCTA+AGG - Chr7:88805377-88805396 MsG0780041250.01.T01:intron 40.0%
CTTCTTGGACTCGACATTAA+TGG - Chr7:88801202-88801221 MsG0780041250.01.T01:intron 40.0%
GAATTGTGGTCTGGAAAACA+CGG - Chr7:88802223-88802242 MsG0780041250.01.T01:intron 40.0%
GCACTCAAAACTCTACCAAA+TGG + Chr7:88805560-88805579 None:intergenic 40.0%
GCATTTCCTTGATTCATGTG+AGG + Chr7:88804776-88804795 None:intergenic 40.0%
GCTAATGCCTTTCAACCATT+TGG - Chr7:88805542-88805561 MsG0780041250.01.T01:CDS 40.0%
GGTTCTCAACAGACAAGTAA+AGG - Chr7:88802929-88802948 MsG0780041250.01.T01:intron 40.0%
GTCCTATACAAGCCATTGTA+GGG + Chr7:88803789-88803808 None:intergenic 40.0%
GTGAAACACTAGGGTATATG+GGG + Chr7:88801852-88801871 None:intergenic 40.0%
GTGTTCCCTTAGTTGTCAAA+TGG - Chr7:88804342-88804361 MsG0780041250.01.T01:intron 40.0%
GTTCCTCCATATAACGGTTA+TGG - Chr7:88804482-88804501 MsG0780041250.01.T01:intron 40.0%
GTTCCTTGTATGTGGTAGAA+TGG - Chr7:88803557-88803576 MsG0780041250.01.T01:intron 40.0%
TAGATAAACAGATTTGCGCC+AGG + Chr7:88805488-88805507 None:intergenic 40.0%
TAGCCATAACCGTTATATGG+AGG + Chr7:88804488-88804507 None:intergenic 40.0%
TATGGAGGAACATAACCCAT+AGG + Chr7:88804473-88804492 None:intergenic 40.0%
TCAGCCCATTTGACAACTAA+GGG + Chr7:88804350-88804369 None:intergenic 40.0%
TCATCTTCCGTCATGTGTTT+CGG + Chr7:88801293-88801312 None:intergenic 40.0%
TCTCCATTCTACCACATACA+AGG + Chr7:88803563-88803582 None:intergenic 40.0%
TCTGCATACTTCACTTGCAA+TGG + Chr7:88802646-88802665 None:intergenic 40.0%
TGAAACACTAGGGTATATGG+GGG + Chr7:88801851-88801870 None:intergenic 40.0%
TGGTCCCTTAGCCTAATTTA+AGG + Chr7:88805385-88805404 None:intergenic 40.0%
TGTCCTATACAAGCCATTGT+AGG + Chr7:88803790-88803809 None:intergenic 40.0%
TTGAATGGACGACAGTACTA+TGG + Chr7:88804582-88804601 None:intergenic 40.0%
TTGACTGAAACAGTGCACAA+AGG + Chr7:88803988-88804007 None:intergenic 40.0%
TTGCAAGTGAAGTATGCAGA+TGG - Chr7:88802646-88802665 MsG0780041250.01.T01:intron 40.0%
! ATTATTTGGAGCCATGCCTA+TGG - Chr7:88804454-88804473 MsG0780041250.01.T01:intron 40.0%
! ATTTTCTCTTGATAGGCTCC+TGG - Chr7:88804680-88804699 MsG0780041250.01.T01:intron 40.0%
! CAATGGAAAGCACAAAATGG+AGG - Chr7:88803115-88803134 MsG0780041250.01.T01:intron 40.0%
! CAGTGTTCTAAACAAAGCCT+TGG + Chr7:88802516-88802535 None:intergenic 40.0%
! GACATTAATGGCGGAAACAA+AGG - Chr7:88801214-88801233 MsG0780041250.01.T01:intron 40.0%
! GATGAGAGCTCTCATTTTCA+GGG - Chr7:88805682-88805701 MsG0780041250.01.T01:five_prime_UTR 40.0%
! GCCTAATTTAAGGTTCGGTT+TGG + Chr7:88805375-88805394 None:intergenic 40.0%
! TAAGAGCCAACATAACTTGC+AGG + Chr7:88804851-88804870 None:intergenic 40.0%
! TAAGTTTAGTGGCGGAATTG+TGG - Chr7:88802209-88802228 MsG0780041250.01.T01:intron 40.0%
! TATTTTCACTTAGGACCACC+TGG - Chr7:88805467-88805486 MsG0780041250.01.T01:intron 40.0%
! TCATGTGAGGCATCATATTG+TGG + Chr7:88804763-88804782 None:intergenic 40.0%
! TCTGCACTTTTCTCCAAGTA+TGG - Chr7:88802878-88802897 MsG0780041250.01.T01:intron 40.0%
! TGATGAGAGCTCTCATTTTC+AGG - Chr7:88805681-88805700 MsG0780041250.01.T01:five_prime_UTR 40.0%
! TTATTTGGAGCCATGCCTAT+GGG - Chr7:88804455-88804474 MsG0780041250.01.T01:intron 40.0%
! TTCCCTACAATGGCTTGTAT+AGG - Chr7:88803784-88803803 MsG0780041250.01.T01:CDS 40.0%
! TTCTAGAGATGAAGCCGATA+AGG - Chr7:88801527-88801546 MsG0780041250.01.T01:intron 40.0%
!! ACCGGTGTTAGCAAATGTTT+TGG - Chr7:88805602-88805621 MsG0780041250.01.T01:CDS 40.0%
!! CAAATGGGCTGATACTGAAA+AGG - Chr7:88804358-88804377 MsG0780041250.01.T01:intron 40.0%
!! TAACCAGGTTGATTCTGCAT+TGG + Chr7:88804740-88804759 None:intergenic 40.0%
!! TCAAGTACCGAAACACATGA+CGG - Chr7:88801283-88801302 MsG0780041250.01.T01:CDS 40.0%
!! TGAAGACTAGTTTGCCAAGA+GGG + Chr7:88804132-88804151 None:intergenic 40.0%
!! TTATCGGCTTCATCTCTAGA+AGG + Chr7:88801528-88801547 None:intergenic 40.0%
!!! TGCTTTTGGTTCCTTGTATG+TGG - Chr7:88803549-88803568 MsG0780041250.01.T01:intron 40.0%
AAAATGGAGCGTGGCCTATA+TGG + Chr7:88802379-88802398 None:intergenic 45.0%
AACGGTGTTTGTGCCAGTTT+AGG + Chr7:88805305-88805324 None:intergenic 45.0%
ACGGTGTTTGTGCCAGTTTA+GGG + Chr7:88805304-88805323 None:intergenic 45.0%
ACTGTGCTTTCTGAGCTCTT+CGG + Chr7:88804394-88804413 None:intergenic 45.0%
AGACCTTTGAATAGTCCTCC+TGG - Chr7:88804929-88804948 MsG0780041250.01.T01:intron 45.0%
AGGAACATAACCCATAGGCA+TGG + Chr7:88804468-88804487 None:intergenic 45.0%
ATAAACAGATTTGCGCCAGG+TGG + Chr7:88805485-88805504 None:intergenic 45.0%
ATAGCAGATTGAGCAGCTTC+TGG + Chr7:88805726-88805745 None:intergenic 45.0%
ATTCCTCCAGGATATGCCAT+TGG + Chr7:88804899-88804918 None:intergenic 45.0%
CAACATCCAATGGCATATCC+TGG - Chr7:88804890-88804909 MsG0780041250.01.T01:intron 45.0%
CATAAGAGGGACAACAAACC+CGG - Chr7:88805795-88805814 MsG0780041250.01.T01:five_prime_UTR 45.0%
CCTGACTAAGATGGCATGAA+CGG - Chr7:88803506-88803525 MsG0780041250.01.T01:intron 45.0%
CGTTCATGCCATCTTAGTCA+GGG + Chr7:88803508-88803527 None:intergenic 45.0%
CTTGGACTAATCATTCCTCC+AGG + Chr7:88804911-88804930 None:intergenic 45.0%
CTTGGACTCGACATTAATGG+CGG - Chr7:88801205-88801224 MsG0780041250.01.T01:intron 45.0%
GAACCAGGAGGACTATTCAA+AGG + Chr7:88804935-88804954 None:intergenic 45.0%
GATAGGCTCCTGGAAGTTAT+GGG - Chr7:88804690-88804709 MsG0780041250.01.T01:intron 45.0%
GCACAAAGGTTTGTGTGCAT+GGG + Chr7:88803974-88803993 None:intergenic 45.0%
GCTCGAACTTGATCCAAGTT+TGG - Chr7:88803857-88803876 MsG0780041250.01.T01:intron 45.0%
GGAAAGGGAAAATCAAGCTC+TGG - Chr7:88803878-88803897 MsG0780041250.01.T01:intron 45.0%
GGAGGACTATTCAAAGGTCT+TGG + Chr7:88804929-88804948 None:intergenic 45.0%
GGCATCATATTGTGGTAACC+AGG + Chr7:88804755-88804774 None:intergenic 45.0%
GGCATGGCTCCAAATAATGA+AGG + Chr7:88804452-88804471 None:intergenic 45.0%
GTCGTCGATGCAAATTGACA+AGG + Chr7:88801104-88801123 None:intergenic 45.0%
TAACTGGCAGGTGTCCATAT+AGG - Chr7:88802362-88802381 MsG0780041250.01.T01:CDS 45.0%
TAGCAGATTGAGCAGCTTCT+GGG + Chr7:88805725-88805744 None:intergenic 45.0%
TAGGACATTGTTCCACACCT+AGG - Chr7:88803803-88803822 MsG0780041250.01.T01:intron 45.0%
TAGGGAACAAACCCACCATT+AGG + Chr7:88803771-88803790 None:intergenic 45.0%
TCAGGGTCCAGCAAAAATTC+TGG - Chr7:88804995-88805014 MsG0780041250.01.T01:intron 45.0%
TCCAGCAAAAATTCTGGTGG+TGG - Chr7:88805001-88805020 MsG0780041250.01.T01:intron 45.0%
TGATAGGCTCCTGGAAGTTA+TGG - Chr7:88804689-88804708 MsG0780041250.01.T01:intron 45.0%
TGCACAAAGGTTTGTGTGCA+TGG + Chr7:88803975-88803994 None:intergenic 45.0%
TGTCTTGTGTTTGCATGACC+TGG - Chr7:88804199-88804218 MsG0780041250.01.T01:CDS 45.0%
! ACACGCATTAACGGCCTTAT+CGG + Chr7:88801544-88801563 None:intergenic 45.0%
! ACCACCACCAGAATTTTTGC+TGG + Chr7:88805005-88805024 None:intergenic 45.0%
! AGAACAAGCTCTTGCTGCTT+TGG - Chr7:88803085-88803104 MsG0780041250.01.T01:intron 45.0%
! AGCAGCAAGAGCTTGTTCTT+TGG + Chr7:88803084-88803103 None:intergenic 45.0%
! GATGGCGAGTTGGAAAGATT+AGG - Chr7:88802664-88802683 MsG0780041250.01.T01:intron 45.0%
! GGAAAGCACAAAATGGAGGT+TGG - Chr7:88803119-88803138 MsG0780041250.01.T01:intron 45.0%
! GGAGGCACATGATAGTTTCT+AGG + Chr7:88804830-88804849 None:intergenic 45.0%
! TAACGGGTAAAACCTAGGTG+TGG + Chr7:88803818-88803837 None:intergenic 45.0%
!! CGTGTTAGTTCTACTAGGCT+GGG - Chr7:88802009-88802028 MsG0780041250.01.T01:CDS 45.0%
!! GCTGTTAACTAGTGCTGATG+TGG - Chr7:88805241-88805260 MsG0780041250.01.T01:intron 45.0%
!! GTGAAGACTAGTTTGCCAAG+AGG + Chr7:88804133-88804152 None:intergenic 45.0%
!! TCGTGTTAGTTCTACTAGGC+TGG - Chr7:88802008-88802027 MsG0780041250.01.T01:CDS 45.0%
AATGCATTGCGGCCAGATCT+CGG - Chr7:88804791-88804810 MsG0780041250.01.T01:intron 50.0%
AGCAGATTGAGCAGCTTCTG+GGG + Chr7:88805724-88805743 None:intergenic 50.0%
ATAGAAGGCAAGTGGGCAAC+AGG - Chr7:88803291-88803310 MsG0780041250.01.T01:intron 50.0%
CATCCAATGGCATATCCTGG+AGG - Chr7:88804893-88804912 MsG0780041250.01.T01:intron 50.0%
CCACCAATGCAGAATCAACC+TGG - Chr7:88804734-88804753 MsG0780041250.01.T01:intron 50.0%
CCGTTCATGCCATCTTAGTC+AGG + Chr7:88803509-88803528 None:intergenic 50.0%
CTGTGCTTTCTGAGCTCTTC+GGG + Chr7:88804393-88804412 None:intergenic 50.0%
GAAGGTGAAACAGAACCAGG+AGG + Chr7:88804947-88804966 None:intergenic 50.0%
GAAGTATGCAGATGGCGAGT+TGG - Chr7:88802654-88802673 MsG0780041250.01.T01:intron 50.0%
GCAACTCCGCTACATCATCA+GGG - Chr7:88804978-88804997 MsG0780041250.01.T01:intron 50.0%
GCCAGGGTTACAACATCCAA+TGG - Chr7:88804880-88804899 MsG0780041250.01.T01:intron 50.0%
GCCATTGGATGTTGTAACCC+TGG + Chr7:88804884-88804903 None:intergenic 50.0%
GGGTCCAGCAAAAATTCTGG+TGG - Chr7:88804998-88805017 MsG0780041250.01.T01:intron 50.0%
GTGCCTCCTGCAAGTTATGT+TGG - Chr7:88804842-88804861 MsG0780041250.01.T01:intron 50.0%
GTTTCACCTTCCGGTGGAAA+TGG - Chr7:88804956-88804975 MsG0780041250.01.T01:intron 50.0%
TTCATATTGGGGCCGAGATC+TGG + Chr7:88804806-88804825 None:intergenic 50.0%
! GAGCCAACATAACTTGCAGG+AGG + Chr7:88804848-88804867 None:intergenic 50.0%
! GGTGGGTTTGTTCCCTACAA+TGG - Chr7:88803774-88803793 MsG0780041250.01.T01:CDS 50.0%
! GGTTGATTCTGCATTGGTGG+CGG + Chr7:88804734-88804753 None:intergenic 50.0%
! TGTGACTGAATGCCGCTTGA+AGG + Chr7:88803647-88803666 None:intergenic 50.0%
! TTAGTGGCGGAATTGTGGTC+TGG - Chr7:88802214-88802233 MsG0780041250.01.T01:intron 50.0%
!! ACAAGCTCTTGCTGCTTTGG+AGG - Chr7:88803088-88803107 MsG0780041250.01.T01:intron 50.0%
!! CCAGGTTGATTCTGCATTGG+TGG + Chr7:88804737-88804756 None:intergenic 50.0%
!! CCTGGTTCTGTTTCACCTTC+CGG - Chr7:88804947-88804966 MsG0780041250.01.T01:intron 50.0%
!! GCTGCTTTGGAGGCAATCAA+TGG - Chr7:88803098-88803117 MsG0780041250.01.T01:intron 50.0%
AAAGCTACACGCGCTTCTCG+AGG - Chr7:88801371-88801390 MsG0780041250.01.T01:CDS 55.0%
CCGGAAGGTGAAACAGAACC+AGG + Chr7:88804950-88804969 None:intergenic 55.0%
GCTCTTATCCTGCTGTGCCA+GGG - Chr7:88804864-88804883 MsG0780041250.01.T01:intron 55.0%
GGCAACTCCGCTACATCATC+AGG - Chr7:88804977-88804996 MsG0780041250.01.T01:intron 55.0%
GGCATGAGCCCATAACTTCC+AGG + Chr7:88804701-88804720 None:intergenic 55.0%
GGTTCTGTTTCACCTTCCGG+TGG - Chr7:88804950-88804969 MsG0780041250.01.T01:intron 55.0%
TGTTGTAACCCTGGCACAGC+AGG + Chr7:88804875-88804894 None:intergenic 55.0%
! AGCGGAGTTGCCATTTCCAC+CGG + Chr7:88804969-88804988 None:intergenic 55.0%
! GAGTTGCCATTTCCACCGGA+AGG + Chr7:88804965-88804984 None:intergenic 55.0%
! GCTGGACCCTGATGATGTAG+CGG + Chr7:88804987-88805006 None:intergenic 55.0%
!! TCTGGTGGTGGTCAAGCTGA+AGG - Chr7:88805013-88805032 MsG0780041250.01.T01:intron 55.0%
GGCTCTTATCCTGCTGTGCC+AGG - Chr7:88804863-88804882 MsG0780041250.01.T01:intron 60.0%
!! ATTGGTGGCGGCATGCGGTA+CGG + Chr7:88804722-88804741 None:intergenic 60.0%
!! TCTGCATTGGTGGCGGCATG+CGG + Chr7:88804727-88804746 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 88801041 88805830 88801041 ID=MsG0780041250.01;Name=MsG0780041250.01
Chr7 mRNA 88801041 88805830 88801041 ID=MsG0780041250.01.T01;Parent=MsG0780041250.01;Name=MsG0780041250.01.T01;_AED=0.50;_eAED=0.51;_QI=180|0.75|0.66|1|0.75|0.66|9|0|438
Chr7 exon 88801041 88801181 88801041 ID=MsG0780041250.01.T01:exon:12234;Parent=MsG0780041250.01.T01
Chr7 exon 88801264 88801391 88801264 ID=MsG0780041250.01.T01:exon:12233;Parent=MsG0780041250.01.T01
Chr7 exon 88801819 88802176 88801819 ID=MsG0780041250.01.T01:exon:12232;Parent=MsG0780041250.01.T01
Chr7 exon 88802360 88802536 88802360 ID=MsG0780041250.01.T01:exon:12231;Parent=MsG0780041250.01.T01
Chr7 exon 88803735 88803814 88803735 ID=MsG0780041250.01.T01:exon:12230;Parent=MsG0780041250.01.T01
Chr7 exon 88803921 88804046 88803921 ID=MsG0780041250.01.T01:exon:12229;Parent=MsG0780041250.01.T01
Chr7 exon 88804186 88804237 88804186 ID=MsG0780041250.01.T01:exon:12228;Parent=MsG0780041250.01.T01
Chr7 exon 88805284 88805366 88805284 ID=MsG0780041250.01.T01:exon:12227;Parent=MsG0780041250.01.T01
Chr7 exon 88805479 88805830 88805479 ID=MsG0780041250.01.T01:exon:12226;Parent=MsG0780041250.01.T01
Chr7 five_prime_UTR 88805651 88805830 88805651 ID=MsG0780041250.01.T01:five_prime_utr;Parent=MsG0780041250.01.T01
Chr7 CDS 88805479 88805650 88805479 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Chr7 CDS 88805284 88805366 88805284 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Chr7 CDS 88804186 88804237 88804186 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Chr7 CDS 88803921 88804046 88803921 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Chr7 CDS 88803735 88803814 88803735 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Chr7 CDS 88802360 88802536 88802360 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Chr7 CDS 88801819 88802176 88801819 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Chr7 CDS 88801264 88801391 88801264 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Chr7 CDS 88801041 88801181 88801041 ID=MsG0780041250.01.T01:cds;Parent=MsG0780041250.01.T01
Gene Sequence

>MsG0780041250.01.T01

ATGGCGGAAACAAAGGAAGAGAGTAAATCTAACAACGAAGAAAGTGTGAAATTGTTCGTAGGTCAAGTACCGAAACACATGACGGAAGATGAGTTACTTCCATTGTTCAAAGAATTTGCTATAGTTGACGAAGTCAACATCATCAAAGACAAAGCTACACGCGCTTCTCGAGGTTGTTGTTTCGTGATTTGTCCTTCTAGAGATGAAGCCGATAAGGCCGTTAATGCGTGTCACAATAAGAAAACATTACCGGGGGCATCTAGTCCATTGCAAGTGAAGTATGCAGATGGCGAGTTGGAAAGATTAGAACACAAACTCTTCATTGGCATGCTTCCAAAGAACATTTCTGAAGTTGAAGTATCTGCACTTTTCTCCAAGTATGGAACTATAAAGGATTTACAAATTTTAAGAGGTTCTCAACAGACAAGTAAAGGTTGTGCATTTTTGAAGTATGAAACCAAAGAACAAGCTCTTGCTGCTTTGGAGGCAATCAATGGAAAGCACAAAATGGAGGGTTCAAGTGTTCCCTTAGTTGTCAAATGGGCTGATACTGAAAAGGAAAGACAAGCCCGAAGAGCTCAGAAAGCACAGTCTCAAGCTTCTAATGTGGGACATGATTCTCAGCATCCTTCATTATTTGGAGCCATGCCTATGGGTTATGTTCCTCCATATAACGGTTATGGCTATCAGGCTCCTGGAAGTTATGGGCTCATGCCGTACCGCATGCCGCCACCAATGCAGAATCAACCTGGTTACCACAATATGATGCCTCACATGAATCAAGGAAATGCATTGCGGCCAGATCTCGGCCCCAATATGAATCCTAGAAACTATCATGTGCCTCCTGCAAGTTATGTTGGCTCTTATCCTGCTGTGCCAGGGTTACAACATCCAATGGCATATCCTGGAGGAATGATTAGTCCAAGACCTTTGAATAGTCCTCCTGGTTCTGTTTCACCTTCCGGTGGAAATGGCAACTCCGCTACATCATCAGGGTCCAGCAAAAATTCTGGTGGTGGTCAAGCTGAAGGTTTCTTATTTCTTACTCGACCACCTGGCGCAAATCTGTTTATCTATCACATACCTCAAGAATTTGGAGATCAAGAGCTTGCTAATGCCTTTCAACCATTTGGTAGAGTTTTGAGTGCTAAAGTTTTTGTTGACAAAGCTACCGGTCTCTCATTTTCAGGGTTTGTAAGTTATGATTCCCCAGAAGCTGCTCAATCTGCTATTAGTATGATGAATGGATGCCAATTAGGAGGTAAGAAATTAAAGGTTCAGCATAAGAGGGACAACAAACCCGGTAAACCTTACTGA
Protein sequence

>MsG0780041250.01.T01

MAETKEESKSNNEESVKLFVGQVPKHMTEDELLPLFKEFAIVDEVNIIKDKATRASRGCCFVICPSRDEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEVEVSALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQASNVGHDSQHPSLFGAMPMGYVPPYNGYGYQAPGSYGLMPYRMPPPMQNQPGYHNMMPHMNQGNALRPDLGPNMNPRNYHVPPASYVGSYPAVPGLQHPMAYPGGMISPRPLNSPPGSVSPSGGNGNSATSSGSSKNSGGGQAEGFLFLTRPPGANLFIYHIPQEFGDQELANAFQPFGRVLSAKVFVDKATGLSFSGFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKPGKPY*