Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047554.01.T01 | XP_013458563.1 | 99.537 | 432 | 1 | 1 | 1 | 432 | 1 | 431 | 0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047554.01.T01 | Q9M0B6 | 85.579 | 423 | 57 | 1 | 7 | 429 | 3 | 421 | 0 | 749 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047554.01.T01 | A0A072US06 | 99.537 | 432 | 1 | 1 | 1 | 432 | 1 | 431 | 0.0 | 885 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005199.01 | MsG0880047554.01 | 0.825808 | 3.829688e-54 | 3.527896e-51 |
| MsG0580025441.01 | MsG0880047554.01 | 0.824148 | 9.442722e-54 | 8.295242e-51 |
| MsG0380015676.01 | MsG0880047554.01 | 0.805824 | 1.107450e-49 | 5.917575e-47 |
| MsG0380015862.01 | MsG0880047554.01 | 0.901412 | 2.750099e-78 | 3.710687e-74 |
| MsG0580028371.01 | MsG0880047554.01 | 0.815889 | 7.333308e-52 | 5.118606e-49 |
| MsG0280009108.01 | MsG0880047554.01 | 0.833043 | 6.690514e-56 | 7.614862e-53 |
| MsG0280009139.01 | MsG0880047554.01 | 0.839490 | 1.536222e-57 | 2.124907e-54 |
| MsG0780039440.01 | MsG0880047554.01 | 0.814472 | 1.514239e-51 | 1.017029e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880047554.01 | MsG0780041250.01 | PPI |
| MsG0880047554.01 | MsG0480019167.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047554.01.T01 | MTR_4g129820 | 99.537 | 432 | 1 | 1 | 1 | 432 | 1 | 431 | 0.0 | 885 |
| MsG0880047554.01.T01 | MTR_4g024600 | 67.593 | 432 | 130 | 4 | 7 | 431 | 8 | 436 | 0.0 | 591 |
| MsG0880047554.01.T01 | MTR_0354s0040 | 67.849 | 423 | 122 | 4 | 14 | 431 | 4 | 417 | 0.0 | 587 |
| MsG0880047554.01.T01 | MTR_3g084090 | 65.187 | 428 | 135 | 5 | 14 | 428 | 5 | 431 | 0.0 | 554 |
| MsG0880047554.01.T01 | MTR_4g102270 | 62.238 | 429 | 150 | 3 | 5 | 427 | 2 | 424 | 0.0 | 551 |
| MsG0880047554.01.T01 | MTR_5g011940 | 69.972 | 363 | 107 | 1 | 74 | 434 | 66 | 428 | 0.0 | 529 |
| MsG0880047554.01.T01 | MTR_0034s0060 | 28.144 | 334 | 211 | 9 | 97 | 423 | 138 | 449 | 2.20e-23 | 103 |
| MsG0880047554.01.T01 | MTR_2g032100 | 26.629 | 353 | 223 | 12 | 90 | 422 | 65 | 401 | 2.91e-23 | 101 |
| MsG0880047554.01.T01 | MTR_2g073240 | 27.193 | 342 | 208 | 9 | 97 | 425 | 20 | 333 | 3.38e-22 | 99.8 |
| MsG0880047554.01.T01 | MTR_8g099535 | 28.022 | 364 | 211 | 15 | 97 | 432 | 5 | 345 | 6.03e-22 | 96.7 |
| MsG0880047554.01.T01 | MTR_1g009600 | 26.100 | 341 | 209 | 9 | 97 | 423 | 6 | 317 | 1.07e-21 | 98.2 |
| MsG0880047554.01.T01 | MTR_5g009170 | 27.401 | 354 | 222 | 13 | 97 | 430 | 48 | 386 | 1.27e-20 | 93.6 |
| MsG0880047554.01.T01 | MTR_2g032100 | 30.612 | 196 | 132 | 3 | 90 | 283 | 65 | 258 | 3.34e-20 | 90.9 |
| MsG0880047554.01.T01 | MTR_1g088480 | 27.195 | 353 | 202 | 15 | 85 | 420 | 98 | 412 | 5.76e-20 | 92.0 |
| MsG0880047554.01.T01 | MTR_8g089180 | 25.691 | 362 | 230 | 13 | 91 | 430 | 66 | 410 | 1.63e-19 | 90.5 |
| MsG0880047554.01.T01 | MTR_8g089180 | 25.691 | 362 | 230 | 13 | 91 | 430 | 66 | 410 | 1.63e-19 | 90.5 |
| MsG0880047554.01.T01 | MTR_4g063600 | 26.807 | 332 | 203 | 13 | 93 | 416 | 29 | 328 | 3.38e-19 | 89.0 |
| MsG0880047554.01.T01 | MTR_2g096660 | 26.567 | 335 | 200 | 13 | 93 | 416 | 35 | 334 | 9.44e-19 | 87.4 |
| MsG0880047554.01.T01 | MTR_5g009160 | 26.536 | 358 | 220 | 14 | 97 | 430 | 5 | 343 | 1.80e-18 | 86.7 |
| MsG0880047554.01.T01 | MTR_4g063600 | 27.108 | 332 | 199 | 14 | 93 | 416 | 29 | 325 | 1.36e-17 | 84.0 |
| MsG0880047554.01.T01 | MTR_4g120030 | 24.091 | 440 | 262 | 17 | 3 | 420 | 16 | 405 | 2.81e-17 | 84.0 |
| MsG0880047554.01.T01 | MTR_8g096880 | 25.862 | 348 | 218 | 12 | 98 | 422 | 8 | 338 | 5.95e-17 | 82.0 |
| MsG0880047554.01.T01 | MTR_8g096880 | 26.727 | 333 | 204 | 12 | 98 | 407 | 8 | 323 | 1.68e-16 | 80.5 |
| MsG0880047554.01.T01 | MTR_4g134490 | 24.661 | 369 | 230 | 12 | 80 | 422 | 11 | 357 | 2.61e-16 | 80.5 |
| MsG0880047554.01.T01 | MTR_8g096880 | 34.356 | 163 | 101 | 4 | 98 | 257 | 8 | 167 | 1.09e-15 | 77.8 |
| MsG0880047554.01.T01 | MTR_4g134490 | 24.928 | 349 | 224 | 11 | 80 | 407 | 11 | 342 | 1.37e-15 | 78.6 |
| MsG0880047554.01.T01 | MTR_7g115080 | 23.599 | 339 | 215 | 11 | 96 | 422 | 29 | 335 | 7.24e-13 | 70.1 |
| MsG0880047554.01.T01 | MTR_7g115080 | 24.189 | 339 | 213 | 12 | 96 | 422 | 63 | 369 | 8.52e-13 | 70.1 |
| MsG0880047554.01.T01 | MTR_7g115080 | 23.599 | 339 | 215 | 11 | 96 | 422 | 42 | 348 | 9.76e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047554.01.T01 | AT4G30440 | 85.579 | 423 | 57 | 1 | 7 | 429 | 3 | 421 | 0.0 | 749 |
| MsG0880047554.01.T01 | AT1G02000 | 69.231 | 429 | 124 | 5 | 6 | 430 | 2 | 426 | 0.0 | 600 |
| MsG0880047554.01.T01 | AT4G00110 | 69.053 | 433 | 116 | 5 | 6 | 431 | 5 | 426 | 0.0 | 596 |
| MsG0880047554.01.T01 | AT2G45310 | 67.051 | 434 | 124 | 5 | 6 | 427 | 2 | 428 | 0.0 | 575 |
| MsG0880047554.01.T01 | AT3G23820 | 72.521 | 353 | 97 | 0 | 76 | 428 | 92 | 444 | 0.0 | 547 |
| MsG0880047554.01.T01 | AT4G12250 | 65.429 | 431 | 135 | 4 | 6 | 427 | 2 | 427 | 0.0 | 539 |
| MsG0880047554.01.T01 | AT4G23920 | 29.178 | 353 | 200 | 13 | 97 | 422 | 4 | 333 | 7.97e-25 | 105 |
| MsG0880047554.01.T01 | AT3G14790 | 27.246 | 334 | 214 | 9 | 97 | 423 | 8 | 319 | 9.99e-23 | 101 |
| MsG0880047554.01.T01 | AT3G14790 | 27.246 | 334 | 214 | 9 | 97 | 423 | 11 | 322 | 1.14e-22 | 101 |
| MsG0880047554.01.T01 | AT1G78570 | 27.844 | 334 | 212 | 10 | 97 | 423 | 8 | 319 | 6.87e-22 | 99.0 |
| MsG0880047554.01.T01 | AT4G10960 | 28.691 | 359 | 209 | 16 | 97 | 429 | 5 | 342 | 3.98e-21 | 94.7 |
| MsG0880047554.01.T01 | AT1G53500 | 27.246 | 334 | 214 | 9 | 97 | 423 | 10 | 321 | 4.97e-21 | 96.3 |
| MsG0880047554.01.T01 | AT1G30620 | 25.691 | 362 | 234 | 12 | 91 | 432 | 66 | 412 | 9.05e-21 | 94.4 |
| MsG0880047554.01.T01 | AT1G30620 | 25.691 | 362 | 234 | 12 | 91 | 432 | 66 | 412 | 9.05e-21 | 94.4 |
| MsG0880047554.01.T01 | AT1G30620 | 25.691 | 362 | 234 | 12 | 91 | 432 | 66 | 412 | 9.05e-21 | 94.4 |
| MsG0880047554.01.T01 | AT1G30620 | 25.691 | 362 | 234 | 12 | 91 | 432 | 66 | 412 | 9.05e-21 | 94.4 |
| MsG0880047554.01.T01 | AT1G30620 | 25.691 | 362 | 234 | 12 | 91 | 432 | 65 | 411 | 9.68e-21 | 94.4 |
| MsG0880047554.01.T01 | AT3G62830 | 26.765 | 340 | 208 | 12 | 92 | 423 | 115 | 421 | 9.74e-21 | 94.4 |
| MsG0880047554.01.T01 | AT3G62830 | 26.765 | 340 | 208 | 12 | 92 | 423 | 115 | 421 | 9.74e-21 | 94.4 |
| MsG0880047554.01.T01 | AT2G47650 | 26.844 | 339 | 197 | 13 | 96 | 421 | 121 | 421 | 6.38e-20 | 92.0 |
| MsG0880047554.01.T01 | AT2G28760 | 26.866 | 335 | 199 | 13 | 93 | 416 | 28 | 327 | 9.56e-20 | 90.5 |
| MsG0880047554.01.T01 | AT2G28760 | 26.866 | 335 | 199 | 13 | 93 | 416 | 28 | 327 | 9.56e-20 | 90.5 |
| MsG0880047554.01.T01 | AT2G28760 | 26.866 | 335 | 199 | 13 | 93 | 416 | 28 | 327 | 9.56e-20 | 90.5 |
| MsG0880047554.01.T01 | AT2G28760 | 26.866 | 335 | 199 | 13 | 93 | 416 | 59 | 358 | 1.50e-19 | 90.1 |
| MsG0880047554.01.T01 | AT1G12780 | 26.857 | 350 | 214 | 13 | 97 | 422 | 8 | 339 | 2.21e-19 | 89.4 |
| MsG0880047554.01.T01 | AT3G53520 | 25.444 | 338 | 201 | 12 | 96 | 420 | 120 | 419 | 2.26e-19 | 90.5 |
| MsG0880047554.01.T01 | AT1G64440 | 26.099 | 364 | 222 | 12 | 97 | 434 | 4 | 346 | 4.95e-19 | 88.6 |
| MsG0880047554.01.T01 | AT5G44480 | 25.356 | 351 | 226 | 12 | 92 | 422 | 67 | 401 | 9.45e-19 | 88.2 |
| MsG0880047554.01.T01 | AT5G44480 | 25.356 | 351 | 226 | 12 | 92 | 422 | 67 | 401 | 9.45e-19 | 88.2 |
| MsG0880047554.01.T01 | AT5G44480 | 25.356 | 351 | 226 | 12 | 92 | 422 | 67 | 401 | 9.45e-19 | 88.2 |
| MsG0880047554.01.T01 | AT5G44480 | 25.356 | 351 | 226 | 12 | 92 | 422 | 91 | 425 | 1.44e-18 | 87.8 |
| MsG0880047554.01.T01 | AT1G30620 | 29.744 | 195 | 133 | 3 | 91 | 283 | 66 | 258 | 1.80e-18 | 85.9 |
| MsG0880047554.01.T01 | AT4G20460 | 25.620 | 363 | 231 | 14 | 92 | 432 | 66 | 411 | 2.48e-18 | 87.0 |
| MsG0880047554.01.T01 | AT2G47650 | 26.239 | 343 | 200 | 14 | 96 | 421 | 121 | 427 | 4.70e-18 | 86.7 |
| MsG0880047554.01.T01 | AT1G63180 | 27.089 | 347 | 217 | 13 | 97 | 422 | 8 | 339 | 8.55e-18 | 84.7 |
| MsG0880047554.01.T01 | AT3G53520 | 25.148 | 338 | 200 | 13 | 96 | 420 | 120 | 417 | 4.38e-17 | 83.6 |
| MsG0880047554.01.T01 | AT1G63180 | 28.231 | 294 | 180 | 11 | 97 | 371 | 8 | 289 | 5.18e-16 | 79.0 |
| MsG0880047554.01.T01 | AT3G53520 | 24.286 | 350 | 213 | 13 | 96 | 420 | 120 | 442 | 1.05e-15 | 79.3 |
| MsG0880047554.01.T01 | AT3G53520 | 27.731 | 238 | 148 | 8 | 96 | 326 | 120 | 340 | 6.39e-15 | 76.3 |
| MsG0880047554.01.T01 | AT5G28840 | 22.832 | 346 | 210 | 12 | 96 | 422 | 28 | 335 | 1.45e-11 | 66.2 |
| MsG0880047554.01.T01 | AT5G28840 | 22.832 | 346 | 210 | 12 | 96 | 422 | 28 | 335 | 1.45e-11 | 66.2 |
Find 121 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTGGTATCTTTCTTATTA+TGG | 0.181735 | 8:+88027568 | MsG0880047554.01.T01:CDS |
| GCTTCTTCAAGTTCGGTTTA+TGG | 0.210656 | 8:+88026965 | MsG0880047554.01.T01:CDS |
| ACCGGCGCAGCTGGTTTCAT+TGG | 0.250792 | 8:+88026608 | MsG0880047554.01.T01:CDS |
| ATCCTCAACCGTCGATTGTT+TGG | 0.264214 | 8:+88026942 | MsG0880047554.01.T01:CDS |
| CACACTTATAATCACATTTA+CGG | 0.269492 | 8:+88027082 | MsG0880047554.01.T01:CDS |
| GCCATCATCATCATCTTCTT+TGG | 0.270104 | 8:+88026310 | MsG0880047554.01.T01:CDS |
| TATCTTTCTTATTATGGTTA+TGG | 0.271440 | 8:+88027574 | MsG0880047554.01.T01:CDS |
| TCCTCAACCGTCGATTGTTT+GGG | 0.276207 | 8:+88026943 | MsG0880047554.01.T01:CDS |
| GCCGGTATCTCTCCGCTTCA+TGG | 0.283731 | 8:+88026510 | MsG0880047554.01.T01:CDS |
| CGTCAGGTTCACCGTTGTTT+CGG | 0.306919 | 8:+88026398 | MsG0880047554.01.T01:CDS |
| CGGTTTATCGGGGCAAGAAT+CGG | 0.310974 | 8:+88027212 | MsG0880047554.01.T01:CDS |
| TTTCACTAGAAATATGCTTC+AGG | 0.320164 | 8:+88027177 | MsG0880047554.01.T01:CDS |
| TTTCAAGGCGTCGTTGATTC+CGG | 0.335632 | 8:+88026485 | MsG0880047554.01.T01:CDS |
| TCTTCGAGCCGAAGTGATAT+TGG | 0.337799 | 8:-88027491 | None:intergenic |
| GTCTTTCAATCACTGGTTTA+CGG | 0.353235 | 8:+88027104 | MsG0880047554.01.T01:CDS |
| ACCGTATCGGATCTTTAATC+TGG | 0.354061 | 8:+88027348 | MsG0880047554.01.T01:CDS |
| ACTTCGGCTCGAAGAGAATT+CGG | 0.356084 | 8:+88027499 | MsG0880047554.01.T01:CDS |
| TTCAAGCACCATGTTCTTGT+GGG | 0.364536 | 8:+88026424 | MsG0880047554.01.T01:CDS |
| GGTTTATCGGGGCAAGAATC+GGG | 0.379457 | 8:+88027213 | MsG0880047554.01.T01:CDS |
| TTGCCCCGATAAACCGTAAT+CGG | 0.384988 | 8:-88027205 | None:intergenic |
| CCCACTACTGATATTCAAAC+CGG | 0.398293 | 8:+88027529 | MsG0880047554.01.T01:CDS |
| CTTTCGATCTTGAATTTCCC+TGG | 0.398678 | 8:-88026356 | None:intergenic |
| CCGGCGCAGCTGGTTTCATT+GGG | 0.399259 | 8:+88026609 | MsG0880047554.01.T01:CDS |
| GTTGGATCATTGGATACTTC+GGG | 0.400108 | 8:+88027286 | MsG0880047554.01.T01:CDS |
| GCTTCAGGGAAAACCGATTA+CGG | 0.407580 | 8:+88027192 | MsG0880047554.01.T01:CDS |
| TGTTTGGGCTTCTTCAAGTT+CGG | 0.422515 | 8:+88026958 | MsG0880047554.01.T01:CDS |
| GAAAACCGATTACGGTTTAT+CGG | 0.422806 | 8:+88027200 | MsG0880047554.01.T01:CDS |
| CCGGTATCTCTCCGCTTCAT+GGG | 0.427134 | 8:+88026511 | MsG0880047554.01.T01:CDS |
| TTGAATTTCCCTGGAGTGGA+TGG | 0.432206 | 8:-88026347 | None:intergenic |
| CTTCAAGCACCATGTTCTTG+TGG | 0.437354 | 8:+88026423 | MsG0880047554.01.T01:CDS |
| TTCACTAGAAATATGCTTCA+GGG | 0.439425 | 8:+88027178 | MsG0880047554.01.T01:CDS |
| GAAGGGATGTGTTGGATCAT+TGG | 0.440266 | 8:+88027276 | MsG0880047554.01.T01:CDS |
| GTACTTGTCACCGGCGCAGC+TGG | 0.442621 | 8:+88026599 | MsG0880047554.01.T01:CDS |
| AAAACCGATTACGGTTTATC+GGG | 0.446835 | 8:+88027201 | MsG0880047554.01.T01:CDS |
| CTTCGGCTCGAAGAGAATTC+GGG | 0.447409 | 8:+88027500 | MsG0880047554.01.T01:CDS |
| CTTCATGGGGTGGAATTCAA+TGG | 0.449305 | 8:+88026525 | MsG0880047554.01.T01:CDS |
| ATCGTAGATATGCCTGGAAA+TGG | 0.451456 | 8:+88027448 | MsG0880047554.01.T01:CDS |
| CCCATGAAGCGGAGAGATAC+CGG | 0.457700 | 8:-88026511 | None:intergenic |
| ATCGGATCGGACCGATCAAC+CGG | 0.460933 | 8:+88027015 | MsG0880047554.01.T01:CDS |
| CCCAATGAAACCAGCTGCGC+CGG | 0.461392 | 8:-88026609 | None:intergenic |
| GTACTGACATGCCGCCTTGA+CGG | 0.469337 | 8:-88026580 | None:intergenic |
| CAGTTGATGCGATAAGCAAA+AGG | 0.469545 | 8:-88026448 | None:intergenic |
| TGTTGGATCATTGGATACTT+CGG | 0.470042 | 8:+88027285 | MsG0880047554.01.T01:CDS |
| GTCCGATCCGATTCAGAAAA+CGG | 0.482746 | 8:-88027004 | None:intergenic |
| ATTTACGGTCTTTCAATCAC+TGG | 0.485594 | 8:+88027097 | MsG0880047554.01.T01:CDS |
| GCCGGTGACGGTGCCGACAC+TGG | 0.488782 | 8:+88027381 | MsG0880047554.01.T01:CDS |
| GATACTTCGGGTAAGAGTAC+TGG | 0.490010 | 8:+88027298 | MsG0880047554.01.T01:CDS |
| CAACTCTACCCATCCACTCC+AGG | 0.494155 | 8:+88026338 | MsG0880047554.01.T01:CDS |
| AAGAATATCGTAGATATGCC+TGG | 0.494476 | 8:+88027442 | MsG0880047554.01.T01:CDS |
| AAGGGAACATCACCATTTCC+AGG | 0.495063 | 8:-88027460 | None:intergenic |
| ACCAGTGTCGGCACCGTCAC+CGG | 0.499934 | 8:-88027382 | None:intergenic |
| TTTCACTGTTTATGGACCAT+GGG | 0.501706 | 8:+88027129 | MsG0880047554.01.T01:CDS |
| ATATAAACTCGCCGGTTGAT+CGG | 0.504741 | 8:-88027026 | None:intergenic |
| TTCATGGGGTGGAATTCAAT+GGG | 0.507931 | 8:+88026526 | MsG0880047554.01.T01:CDS |
| TCTCTTGCTTTGAAAAGAAG+AGG | 0.508211 | 8:+88026641 | MsG0880047554.01.T01:CDS |
| CCGTATCGGATCTTTAATCT+GGG | 0.514097 | 8:+88027349 | MsG0880047554.01.T01:CDS |
| AACGTGGAGCAGCACCGTAT+CGG | 0.516784 | 8:+88027335 | MsG0880047554.01.T01:CDS |
| AGCGGAGAGATACCGGCTAC+CGG | 0.518013 | 8:-88026504 | None:intergenic |
| GGGGAATACTTCGCCGGTGA+CGG | 0.520167 | 8:+88027369 | MsG0880047554.01.T01:CDS |
| CTTCACTATATCGTCAATGT+AGG | 0.520270 | 8:-88027257 | None:intergenic |
| AGAAGAGGTGATGGTGTCGT+TGG | 0.521236 | 8:+88026656 | MsG0880047554.01.T01:CDS |
| GATCTTGAATTTCCCTGGAG+TGG | 0.524261 | 8:-88026351 | None:intergenic |
| TAATCTGGGGAATACTTCGC+CGG | 0.527767 | 8:+88027363 | MsG0880047554.01.T01:CDS |
| CCACGGTTTAATGAACCGTC+AGG | 0.528675 | 8:+88026382 | MsG0880047554.01.T01:CDS |
| TCTTCTTGAAGCTTGCAAAA+CGG | 0.530117 | 8:+88026916 | MsG0880047554.01.T01:CDS |
| GTGATATTGGCATGGGTGAA+GGG | 0.530157 | 8:-88027478 | None:intergenic |
| CTGGAGTGGATGGGTAGAGT+TGG | 0.532255 | 8:-88026337 | None:intergenic |
| TTGCTGTTAACATATGACAT+AGG | 0.539948 | 8:-88026875 | None:intergenic |
| TTCAAGAAGAGTGACTAAAC+CGG | 0.543596 | 8:-88026903 | None:intergenic |
| TATCTCTCCGCTTCATGGGG+TGG | 0.546092 | 8:+88026515 | MsG0880047554.01.T01:CDS |
| GCCCAAACAATCGACGGTTG+AGG | 0.547804 | 8:-88026944 | None:intergenic |
| AGTGATATTGGCATGGGTGA+AGG | 0.548496 | 8:-88027479 | None:intergenic |
| GCGTCGTTGATTCCGGTAGC+CGG | 0.549486 | 8:+88026492 | MsG0880047554.01.T01:CDS |
| GATATAGTGAAGGGATGTGT+TGG | 0.556067 | 8:+88027268 | MsG0880047554.01.T01:CDS |
| TTTCAAAGCAAGAGAAACAT+GGG | 0.556424 | 8:-88026633 | None:intergenic |
| CCGGTTTGAATATCAGTAGT+GGG | 0.560234 | 8:-88027529 | None:intergenic |
| GCCATGTCTGGTCTTCCCCA+TGG | 0.560372 | 8:-88027145 | None:intergenic |
| TCGGGTAAGAGTACTGGATC+GGG | 0.560620 | 8:+88027304 | MsG0880047554.01.T01:CDS |
| CCCGGTTTGAATATCAGTAG+TGG | 0.562993 | 8:-88027530 | None:intergenic |
| TTCGGGTAAGAGTACTGGAT+CGG | 0.563210 | 8:+88027303 | MsG0880047554.01.T01:CDS |
| GGTTTATGGTTTAAACGAGA+AGG | 0.563313 | 8:+88026979 | MsG0880047554.01.T01:CDS |
| TGAATTTCCCTGGAGTGGAT+GGG | 0.563480 | 8:-88026346 | None:intergenic |
| AGCTGGTGTGAGATACGCTA+TGG | 0.564884 | 8:+88026847 | MsG0880047554.01.T01:CDS |
| ATGCATCTCGCAGCTCAAGC+TGG | 0.567280 | 8:+88026830 | MsG0880047554.01.T01:CDS |
| TATGCAGCGACGAAGAAAGC+AGG | 0.574218 | 8:+88027046 | MsG0880047554.01.T01:CDS |
| AGTTGATGCGATAAGCAAAA+GGG | 0.575190 | 8:-88026447 | None:intergenic |
| TCCAAAGAAGATGATGATGA+TGG | 0.579880 | 8:-88026311 | None:intergenic |
| CAAAAGGGCCCACAAGAACA+TGG | 0.581018 | 8:-88026432 | None:intergenic |
| GAGCCGAAGTGATATTGGCA+TGG | 0.582998 | 8:-88027486 | None:intergenic |
| GTCGCTGCATATAAACTCGC+CGG | 0.586523 | 8:-88027034 | None:intergenic |
| TTGACGGTGGATTTGAGCGG+AGG | 0.587662 | 8:-88026564 | None:intergenic |
| CACCCATGCCAATATCACTT+CGG | 0.588902 | 8:+88027483 | MsG0880047554.01.T01:CDS |
| AGCCGAAGTGATATTGGCAT+GGG | 0.591042 | 8:-88027485 | None:intergenic |
| CCCAGATTAAAGATCCGATA+CGG | 0.595228 | 8:-88027349 | None:intergenic |
| CGAAACAACGGTGAACCTGA+CGG | 0.595789 | 8:-88026397 | None:intergenic |
| TATGTTAACAGCAACATCGC+CGG | 0.597339 | 8:+88026884 | MsG0880047554.01.T01:CDS |
| CGGTATCTCTCCGCTTCATG+GGG | 0.598560 | 8:+88026512 | MsG0880047554.01.T01:CDS |
| TTGAATTCCACCCCATGAAG+CGG | 0.604390 | 8:-88026522 | None:intergenic |
| CTACATTGACGATATAGTGA+AGG | 0.605438 | 8:+88027258 | MsG0880047554.01.T01:CDS |
| TCCGCTCAAATCCACCGTCA+AGG | 0.609000 | 8:+88026566 | MsG0880047554.01.T01:CDS |
| AACTCTACCCATCCACTCCA+GGG | 0.609470 | 8:+88026339 | MsG0880047554.01.T01:CDS |
| GGCATGTCAGTACTTGTCAC+CGG | 0.625199 | 8:+88026590 | MsG0880047554.01.T01:CDS |
| CCACTACTGATATTCAAACC+GGG | 0.625227 | 8:+88027530 | MsG0880047554.01.T01:CDS |
| ATGCACGATGAAAACGCCGC+GGG | 0.627397 | 8:-88026744 | None:intergenic |
| TACATTGACGATATAGTGAA+GGG | 0.627843 | 8:+88027259 | MsG0880047554.01.T01:CDS |
| TTCAAGATCGAAAGAAACCA+CGG | 0.629481 | 8:+88026365 | MsG0880047554.01.T01:CDS |
| GGTAAGAGTACTGGATCGGG+TGG | 0.630428 | 8:+88027307 | MsG0880047554.01.T01:CDS |
| GCCTTGACGGTGGATTTGAG+CGG | 0.637649 | 8:-88026567 | None:intergenic |
| CTGACATGCCGCCTTGACGG+TGG | 0.644596 | 8:-88026577 | None:intergenic |
| GCTTTGAAAAGAAGAGGTGA+TGG | 0.645226 | 8:+88026647 | MsG0880047554.01.T01:CDS |
| ACCATGGGGAAGACCAGACA+TGG | 0.649667 | 8:+88027144 | MsG0880047554.01.T01:CDS |
| TTCACTGTTTATGGACCATG+GGG | 0.649938 | 8:+88027130 | MsG0880047554.01.T01:CDS |
| TGCTTGAAGAACCGAAACAA+CGG | 0.657956 | 8:-88026409 | None:intergenic |
| TCAAGTATACTCACCAGTGT+CGG | 0.663697 | 8:-88027394 | None:intergenic |
| AAACCGATTACGGTTTATCG+GGG | 0.665354 | 8:+88027202 | MsG0880047554.01.T01:CDS |
| GAAGAAGCCCAAACAATCGA+CGG | 0.665669 | 8:-88026950 | None:intergenic |
| CCTGACGGTTCATTAAACCG+TGG | 0.678837 | 8:-88026382 | None:intergenic |
| CGTATCGGATCTTTAATCTG+GGG | 0.681906 | 8:+88027350 | MsG0880047554.01.T01:CDS |
| GGATCGGGTGGAAAGAAACG+TGG | 0.697082 | 8:+88027319 | MsG0880047554.01.T01:CDS |
| CATGCACGATGAAAACGCCG+CGG | 0.715603 | 8:-88026745 | None:intergenic |
| GCTCAAATCCACCGTCAAGG+CGG | 0.724590 | 8:+88026569 | MsG0880047554.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCTTTCTTATTATGGTTA+TGG | + | Chr8:88027574-88027593 | MsG0880047554.01.T01:CDS | 20.0% |
| ! | AAGTGGTATCTTTCTTATTA+TGG | + | Chr8:88027568-88027587 | MsG0880047554.01.T01:CDS | 25.0% |
| ! | CACACTTATAATCACATTTA+CGG | + | Chr8:88027082-88027101 | MsG0880047554.01.T01:CDS | 25.0% |
| AAAGTAAAAATAGCCATGTC+TGG | - | Chr8:88027160-88027179 | None:intergenic | 30.0% | |
| TACATTGACGATATAGTGAA+GGG | + | Chr8:88027259-88027278 | MsG0880047554.01.T01:CDS | 30.0% | |
| TTCACTAGAAATATGCTTCA+GGG | + | Chr8:88027178-88027197 | MsG0880047554.01.T01:CDS | 30.0% | |
| TTTCAAAGCAAGAGAAACAT+GGG | - | Chr8:88026636-88026655 | None:intergenic | 30.0% | |
| TTTCACTAGAAATATGCTTC+AGG | + | Chr8:88027177-88027196 | MsG0880047554.01.T01:CDS | 30.0% | |
| ! | TTACGGTTTTTCACTGTTTA+TGG | + | Chr8:88027121-88027140 | MsG0880047554.01.T01:CDS | 30.0% |
| ! | TTGCTGTTAACATATGACAT+AGG | - | Chr8:88026878-88026897 | None:intergenic | 30.0% |
| ! | TTTTCAAAGCAAGAGAAACA+TGG | - | Chr8:88026637-88026656 | None:intergenic | 30.0% |
| !!! | GTTTCTTATGTCACTTTTCA+AGG | + | Chr8:88026470-88026489 | MsG0880047554.01.T01:CDS | 30.0% |
| !!! | TTTCGAGCTTTTTTCAAAGA+AGG | - | Chr8:88026710-88026729 | None:intergenic | 30.0% |
| AAAACCGATTACGGTTTATC+GGG | + | Chr8:88027201-88027220 | MsG0880047554.01.T01:CDS | 35.0% | |
| AAGAATATCGTAGATATGCC+TGG | + | Chr8:88027442-88027461 | MsG0880047554.01.T01:CDS | 35.0% | |
| ATTTACGGTCTTTCAATCAC+TGG | + | Chr8:88027097-88027116 | MsG0880047554.01.T01:CDS | 35.0% | |
| CTACATTGACGATATAGTGA+AGG | + | Chr8:88027258-88027277 | MsG0880047554.01.T01:CDS | 35.0% | |
| CTTCACTATATCGTCAATGT+AGG | - | Chr8:88027260-88027279 | None:intergenic | 35.0% | |
| GAAAACCGATTACGGTTTAT+CGG | + | Chr8:88027200-88027219 | MsG0880047554.01.T01:CDS | 35.0% | |
| GGTTGAAAAAATTCGTCAAG+TGG | + | Chr8:88027551-88027570 | MsG0880047554.01.T01:CDS | 35.0% | |
| GGTTTATGGTTTAAACGAGA+AGG | + | Chr8:88026979-88026998 | MsG0880047554.01.T01:CDS | 35.0% | |
| TCTTCTTGAAGCTTGCAAAA+CGG | + | Chr8:88026916-88026935 | MsG0880047554.01.T01:CDS | 35.0% | |
| TGTTGGATCATTGGATACTT+CGG | + | Chr8:88027285-88027304 | MsG0880047554.01.T01:CDS | 35.0% | |
| TTCAAGAAGAGTGACTAAAC+CGG | - | Chr8:88026906-88026925 | None:intergenic | 35.0% | |
| TTCAAGATCGAAAGAAACCA+CGG | + | Chr8:88026365-88026384 | MsG0880047554.01.T01:CDS | 35.0% | |
| TTTCACTGTTTATGGACCAT+GGG | + | Chr8:88027129-88027148 | MsG0880047554.01.T01:CDS | 35.0% | |
| ! | AGTTGATGCGATAAGCAAAA+GGG | - | Chr8:88026450-88026469 | None:intergenic | 35.0% |
| ! | TATACTTGAGCGACTTTTGA+AGG | + | Chr8:88027408-88027427 | MsG0880047554.01.T01:CDS | 35.0% |
| ! | TCCAAAGAAGATGATGATGA+TGG | - | Chr8:88026314-88026333 | None:intergenic | 35.0% |
| ! | TTTTCACTGTTTATGGACCA+TGG | + | Chr8:88027128-88027147 | MsG0880047554.01.T01:CDS | 35.0% |
| !! | GTCTTTCAATCACTGGTTTA+CGG | + | Chr8:88027104-88027123 | MsG0880047554.01.T01:CDS | 35.0% |
| !! | TCTCTTGCTTTGAAAAGAAG+AGG | + | Chr8:88026641-88026660 | MsG0880047554.01.T01:CDS | 35.0% |
| !!! | CTTGACGAATTTTTTCAACC+CGG | - | Chr8:88027551-88027570 | None:intergenic | 35.0% |
| AAACCGATTACGGTTTATCG+GGG | + | Chr8:88027202-88027221 | MsG0880047554.01.T01:CDS | 40.0% | |
| ACCGTATCGGATCTTTAATC+TGG | + | Chr8:88027348-88027367 | MsG0880047554.01.T01:CDS | 40.0% | |
| ATCGTAGATATGCCTGGAAA+TGG | + | Chr8:88027448-88027467 | MsG0880047554.01.T01:CDS | 40.0% | |
| CCACTACTGATATTCAAACC+GGG | + | Chr8:88027530-88027549 | MsG0880047554.01.T01:CDS | 40.0% | |
| CCCACTACTGATATTCAAAC+CGG | + | Chr8:88027529-88027548 | MsG0880047554.01.T01:CDS | 40.0% | |
| CCCAGATTAAAGATCCGATA+CGG | - | Chr8:88027352-88027371 | None:intergenic | 40.0% | |
| CCGTATCGGATCTTTAATCT+GGG | + | Chr8:88027349-88027368 | MsG0880047554.01.T01:CDS | 40.0% | |
| CGTATCGGATCTTTAATCTG+GGG | + | Chr8:88027350-88027369 | MsG0880047554.01.T01:CDS | 40.0% | |
| CTTTCGATCTTGAATTTCCC+TGG | - | Chr8:88026359-88026378 | None:intergenic | 40.0% | |
| GATATAGTGAAGGGATGTGT+TGG | + | Chr8:88027268-88027287 | MsG0880047554.01.T01:CDS | 40.0% | |
| GCCATCATCATCATCTTCTT+TGG | + | Chr8:88026310-88026329 | MsG0880047554.01.T01:CDS | 40.0% | |
| GTTGGATCATTGGATACTTC+GGG | + | Chr8:88027286-88027305 | MsG0880047554.01.T01:CDS | 40.0% | |
| TATGTTAACAGCAACATCGC+CGG | + | Chr8:88026884-88026903 | MsG0880047554.01.T01:CDS | 40.0% | |
| TCAAGTATACTCACCAGTGT+CGG | - | Chr8:88027397-88027416 | None:intergenic | 40.0% | |
| TGCTTGAAGAACCGAAACAA+CGG | - | Chr8:88026412-88026431 | None:intergenic | 40.0% | |
| TTCAAGCACCATGTTCTTGT+GGG | + | Chr8:88026424-88026443 | MsG0880047554.01.T01:CDS | 40.0% | |
| TTCACTGTTTATGGACCATG+GGG | + | Chr8:88027130-88027149 | MsG0880047554.01.T01:CDS | 40.0% | |
| TTCATGGGGTGGAATTCAAT+GGG | + | Chr8:88026526-88026545 | MsG0880047554.01.T01:CDS | 40.0% | |
| ! | AGCAAAGCTTTTCGATGTTG+TGG | + | Chr8:88026793-88026812 | MsG0880047554.01.T01:CDS | 40.0% |
| ! | ATATAAACTCGCCGGTTGAT+CGG | - | Chr8:88027029-88027048 | None:intergenic | 40.0% |
| ! | CAGTTGATGCGATAAGCAAA+AGG | - | Chr8:88026451-88026470 | None:intergenic | 40.0% |
| ! | CCGGTTTGAATATCAGTAGT+GGG | - | Chr8:88027532-88027551 | None:intergenic | 40.0% |
| ! | GAAGGTTCCGTTTTCTGAAT+CGG | + | Chr8:88026997-88027016 | MsG0880047554.01.T01:CDS | 40.0% |
| ! | GCTTCTTCAAGTTCGGTTTA+TGG | + | Chr8:88026965-88026984 | MsG0880047554.01.T01:CDS | 40.0% |
| ! | TGTTTGGGCTTCTTCAAGTT+CGG | + | Chr8:88026958-88026977 | MsG0880047554.01.T01:CDS | 40.0% |
| ! | TTCCGTTTTCTGAATCGGAT+CGG | + | Chr8:88027002-88027021 | MsG0880047554.01.T01:CDS | 40.0% |
| !! | GCTTTGAAAAGAAGAGGTGA+TGG | + | Chr8:88026647-88026666 | MsG0880047554.01.T01:CDS | 40.0% |
| AAGGGAACATCACCATTTCC+AGG | - | Chr8:88027463-88027482 | None:intergenic | 45.0% | |
| AGCCGAAGTGATATTGGCAT+GGG | - | Chr8:88027488-88027507 | None:intergenic | 45.0% | |
| AGTGATATTGGCATGGGTGA+AGG | - | Chr8:88027482-88027501 | None:intergenic | 45.0% | |
| CACCCATGCCAATATCACTT+CGG | + | Chr8:88027483-88027502 | MsG0880047554.01.T01:CDS | 45.0% | |
| CTTCAAGCACCATGTTCTTG+TGG | + | Chr8:88026423-88026442 | MsG0880047554.01.T01:CDS | 45.0% | |
| CTTCATGGGGTGGAATTCAA+TGG | + | Chr8:88026525-88026544 | MsG0880047554.01.T01:CDS | 45.0% | |
| GAAGAAGCCCAAACAATCGA+CGG | - | Chr8:88026953-88026972 | None:intergenic | 45.0% | |
| GAAGGGATGTGTTGGATCAT+TGG | + | Chr8:88027276-88027295 | MsG0880047554.01.T01:CDS | 45.0% | |
| GATCTTGAATTTCCCTGGAG+TGG | - | Chr8:88026354-88026373 | None:intergenic | 45.0% | |
| GCTTCAGGGAAAACCGATTA+CGG | + | Chr8:88027192-88027211 | MsG0880047554.01.T01:CDS | 45.0% | |
| GTCCGATCCGATTCAGAAAA+CGG | - | Chr8:88027007-88027026 | None:intergenic | 45.0% | |
| GTGATATTGGCATGGGTGAA+GGG | - | Chr8:88027481-88027500 | None:intergenic | 45.0% | |
| TAATCTGGGGAATACTTCGC+CGG | + | Chr8:88027363-88027382 | MsG0880047554.01.T01:CDS | 45.0% | |
| TCTTCGAGCCGAAGTGATAT+TGG | - | Chr8:88027494-88027513 | None:intergenic | 45.0% | |
| TGAATTTCCCTGGAGTGGAT+GGG | - | Chr8:88026349-88026368 | None:intergenic | 45.0% | |
| TTGAATTCCACCCCATGAAG+CGG | - | Chr8:88026525-88026544 | None:intergenic | 45.0% | |
| TTGAATTTCCCTGGAGTGGA+TGG | - | Chr8:88026350-88026369 | None:intergenic | 45.0% | |
| TTGCCCCGATAAACCGTAAT+CGG | - | Chr8:88027208-88027227 | None:intergenic | 45.0% | |
| ! | ACTTCGGCTCGAAGAGAATT+CGG | + | Chr8:88027499-88027518 | MsG0880047554.01.T01:CDS | 45.0% |
| ! | ATCCTCAACCGTCGATTGTT+TGG | + | Chr8:88026942-88026961 | MsG0880047554.01.T01:CDS | 45.0% |
| ! | CCCGGTTTGAATATCAGTAG+TGG | - | Chr8:88027533-88027552 | None:intergenic | 45.0% |
| ! | GATACTTCGGGTAAGAGTAC+TGG | + | Chr8:88027298-88027317 | MsG0880047554.01.T01:CDS | 45.0% |
| ! | TCCTCAACCGTCGATTGTTT+GGG | + | Chr8:88026943-88026962 | MsG0880047554.01.T01:CDS | 45.0% |
| !! | AAAGCGCTTTTATCATCCCG+CGG | + | Chr8:88026728-88026747 | MsG0880047554.01.T01:CDS | 45.0% |
| !! | TGAGCGACTTTTGAAGGTGA+AGG | + | Chr8:88027414-88027433 | MsG0880047554.01.T01:CDS | 45.0% |
| !! | TTCGGGTAAGAGTACTGGAT+CGG | + | Chr8:88027303-88027322 | MsG0880047554.01.T01:CDS | 45.0% |
| !! | TTTCAAGGCGTCGTTGATTC+CGG | + | Chr8:88026485-88026504 | MsG0880047554.01.T01:CDS | 45.0% |
| AACTCTACCCATCCACTCCA+GGG | + | Chr8:88026339-88026358 | MsG0880047554.01.T01:CDS | 50.0% | |
| AGCTGGTGTGAGATACGCTA+TGG | + | Chr8:88026847-88026866 | MsG0880047554.01.T01:CDS | 50.0% | |
| CAAAAGGGCCCACAAGAACA+TGG | - | Chr8:88026435-88026454 | None:intergenic | 50.0% | |
| CCACGGTTTAATGAACCGTC+AGG | + | Chr8:88026382-88026401 | MsG0880047554.01.T01:CDS | 50.0% | |
| CCTGACGGTTCATTAAACCG+TGG | - | Chr8:88026385-88026404 | None:intergenic | 50.0% | |
| CGAAACAACGGTGAACCTGA+CGG | - | Chr8:88026400-88026419 | None:intergenic | 50.0% | |
| CGGTTTATCGGGGCAAGAAT+CGG | + | Chr8:88027212-88027231 | MsG0880047554.01.T01:CDS | 50.0% | |
| CGTCAGGTTCACCGTTGTTT+CGG | + | Chr8:88026398-88026417 | MsG0880047554.01.T01:CDS | 50.0% | |
| GAGCCGAAGTGATATTGGCA+TGG | - | Chr8:88027489-88027508 | None:intergenic | 50.0% | |
| GGCATGTCAGTACTTGTCAC+CGG | + | Chr8:88026590-88026609 | MsG0880047554.01.T01:CDS | 50.0% | |
| GGTTTATCGGGGCAAGAATC+GGG | + | Chr8:88027213-88027232 | MsG0880047554.01.T01:CDS | 50.0% | |
| GTCGCTGCATATAAACTCGC+CGG | - | Chr8:88027037-88027056 | None:intergenic | 50.0% | |
| TATGCAGCGACGAAGAAAGC+AGG | + | Chr8:88027046-88027065 | MsG0880047554.01.T01:CDS | 50.0% | |
| ! | CTTCGGCTCGAAGAGAATTC+GGG | + | Chr8:88027500-88027519 | MsG0880047554.01.T01:CDS | 50.0% |
| !! | AGAAGAGGTGATGGTGTCGT+TGG | + | Chr8:88026656-88026675 | MsG0880047554.01.T01:CDS | 50.0% |
| !! | TCGGGTAAGAGTACTGGATC+GGG | + | Chr8:88027304-88027323 | MsG0880047554.01.T01:CDS | 50.0% |
| AACGTGGAGCAGCACCGTAT+CGG | + | Chr8:88027335-88027354 | MsG0880047554.01.T01:CDS | 55.0% | |
| ACCATGGGGAAGACCAGACA+TGG | + | Chr8:88027144-88027163 | MsG0880047554.01.T01:CDS | 55.0% | |
| ATCGGATCGGACCGATCAAC+CGG | + | Chr8:88027015-88027034 | MsG0880047554.01.T01:CDS | 55.0% | |
| ATGCACGATGAAAACGCCGC+GGG | - | Chr8:88026747-88026766 | None:intergenic | 55.0% | |
| ATGCATCTCGCAGCTCAAGC+TGG | + | Chr8:88026830-88026849 | MsG0880047554.01.T01:CDS | 55.0% | |
| CAACTCTACCCATCCACTCC+AGG | + | Chr8:88026338-88026357 | MsG0880047554.01.T01:CDS | 55.0% | |
| CATGCACGATGAAAACGCCG+CGG | - | Chr8:88026748-88026767 | None:intergenic | 55.0% | |
| CCCATGAAGCGGAGAGATAC+CGG | - | Chr8:88026514-88026533 | None:intergenic | 55.0% | |
| CCGGTATCTCTCCGCTTCAT+GGG | + | Chr8:88026511-88026530 | MsG0880047554.01.T01:CDS | 55.0% | |
| CGGTATCTCTCCGCTTCATG+GGG | + | Chr8:88026512-88026531 | MsG0880047554.01.T01:CDS | 55.0% | |
| CTGGAGTGGATGGGTAGAGT+TGG | - | Chr8:88026340-88026359 | None:intergenic | 55.0% | |
| GCCCAAACAATCGACGGTTG+AGG | - | Chr8:88026947-88026966 | None:intergenic | 55.0% | |
| GCTCAAATCCACCGTCAAGG+CGG | + | Chr8:88026569-88026588 | MsG0880047554.01.T01:CDS | 55.0% | |
| GGATCGGGTGGAAAGAAACG+TGG | + | Chr8:88027319-88027338 | MsG0880047554.01.T01:CDS | 55.0% | |
| TATCTCTCCGCTTCATGGGG+TGG | + | Chr8:88026515-88026534 | MsG0880047554.01.T01:CDS | 55.0% | |
| TCCGCTCAAATCCACCGTCA+AGG | + | Chr8:88026566-88026585 | MsG0880047554.01.T01:CDS | 55.0% | |
| ! | GCCTTGACGGTGGATTTGAG+CGG | - | Chr8:88026570-88026589 | None:intergenic | 55.0% |
| ! | GTACTGACATGCCGCCTTGA+CGG | - | Chr8:88026583-88026602 | None:intergenic | 55.0% |
| ! | TTGACGGTGGATTTGAGCGG+AGG | - | Chr8:88026567-88026586 | None:intergenic | 55.0% |
| !! | GGTAAGAGTACTGGATCGGG+TGG | + | Chr8:88027307-88027326 | MsG0880047554.01.T01:CDS | 55.0% |
| CCCAATGAAACCAGCTGCGC+CGG | - | Chr8:88026612-88026631 | None:intergenic | 60.0% | |
| GCCGGTATCTCTCCGCTTCA+TGG | + | Chr8:88026510-88026529 | MsG0880047554.01.T01:CDS | 60.0% | |
| GGGGAATACTTCGCCGGTGA+CGG | + | Chr8:88027369-88027388 | MsG0880047554.01.T01:CDS | 60.0% | |
| ! | ACCGGCGCAGCTGGTTTCAT+TGG | + | Chr8:88026608-88026627 | MsG0880047554.01.T01:CDS | 60.0% |
| ! | AGCGGAGAGATACCGGCTAC+CGG | - | Chr8:88026507-88026526 | None:intergenic | 60.0% |
| ! | CCGGCGCAGCTGGTTTCATT+GGG | + | Chr8:88026609-88026628 | MsG0880047554.01.T01:CDS | 60.0% |
| ! | CGCGGCGTTTTCATCGTGCA+TGG | + | Chr8:88026746-88026765 | MsG0880047554.01.T01:CDS | 60.0% |
| ! | GCCATGTCTGGTCTTCCCCA+TGG | - | Chr8:88027148-88027167 | None:intergenic | 60.0% |
| !! | GCGTCGTTGATTCCGGTAGC+CGG | + | Chr8:88026492-88026511 | MsG0880047554.01.T01:CDS | 60.0% |
| CTGACATGCCGCCTTGACGG+TGG | - | Chr8:88026580-88026599 | None:intergenic | 65.0% | |
| GTACTTGTCACCGGCGCAGC+TGG | + | Chr8:88026599-88026618 | MsG0880047554.01.T01:CDS | 65.0% | |
| !! | ACCAGTGTCGGCACCGTCAC+CGG | - | Chr8:88027385-88027404 | None:intergenic | 65.0% |
| !! | GCCGGTGACGGTGCCGACAC+TGG | + | Chr8:88027381-88027400 | MsG0880047554.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 88026308 | 88027612 | 88026308 | ID=MsG0880047554.01;Name=MsG0880047554.01 |
| Chr8 | mRNA | 88026308 | 88027612 | 88026308 | ID=MsG0880047554.01.T01;Parent=MsG0880047554.01;Name=MsG0880047554.01.T01;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|434 |
| Chr8 | exon | 88026308 | 88027612 | 88026308 | ID=MsG0880047554.01.T01:exon:15839;Parent=MsG0880047554.01.T01 |
| Chr8 | CDS | 88026308 | 88027612 | 88026308 | ID=MsG0880047554.01.T01:cds;Parent=MsG0880047554.01.T01 |
| Gene Sequence |
| Protein sequence |
