AlfalfaGEDB | MsG0880042840.01

M. sativa cultivar ZhongmuNo.1 / MsG0880042840.01

KEGG: -
GO: -
PFAM: PF13639

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042840.01.T01	RHN39580.1	95.567	203	7	1	1	203	1	201	1.73E-141	405

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042840.01.T01	Q9XF63	50	166	60	2	18	164	11	172	4.12E-54	178

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042840.01.T01	A0A396GEG5	95.567	203	7	1	1	203	1	201	8.27e-142	405

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047959.01	MsG0880042840.01	0.809996	1.435427e-50	8.553481e-48
MsG0180001663.01	MsG0880042840.01	0.801324	9.501845e-49	4.524678e-46
MsG0180005050.01	MsG0880042840.01	0.803927	2.760175e-49	1.404685e-46
MsG0180006207.01	MsG0880042840.01	0.806141	9.501960e-50	5.118543e-47
MsG0380014573.01	MsG0880042840.01	0.810931	9.019233e-51	5.509174e-48
MsG0480020839.01	MsG0880042840.01	0.801292	9.643670e-49	4.588668e-46
MsG0480021274.01	MsG0880042840.01	0.806515	7.925130e-50	4.309978e-47
MsG0580024073.01	MsG0880042840.01	0.801882	7.300442e-49	3.526007e-46
MsG0580025448.01	MsG0880042840.01	0.807372	5.221192e-50	2.903055e-47
MsG0380016581.01	MsG0880042840.01	0.801528	8.629520e-49	4.130508e-46
MsG0380017680.01	MsG0880042840.01	0.809450	1.881067e-50	1.104755e-47
MsG0280007547.01	MsG0880042840.01	0.801517	8.675823e-49	4.151539e-46
MsG0280009024.01	MsG0880042840.01	0.802213	6.242427e-49	3.040281e-46
MsG0280010443.01	MsG0880042840.01	0.806525	7.884937e-50	4.289230e-47
MsG0780038401.01	MsG0880042840.01	0.807703	4.440507e-50	2.490349e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042840.01.T01	MTR_8g023400	95.567	203	7	1	1	203	1	201	5.50e-145	407
MsG0880042840.01.T01	MTR_7g117540	48.649	148	65	1	19	166	12	148	3.36e-41	142
MsG0880042840.01.T01	MTR_4g120270	42.697	178	75	7	23	182	13	181	2.16e-33	121
MsG0880042840.01.T01	MTR_2g436100	37.143	175	93	5	21	183	23	192	1.93e-31	116
MsG0880042840.01.T01	MTR_3g464780	37.017	181	95	4	23	184	18	198	2.76e-24	97.1
MsG0880042840.01.T01	MTR_5g064890	32.317	164	106	3	31	190	63	225	6.81e-23	95.1
MsG0880042840.01.T01	MTR_5g071930	39.860	143	68	3	31	167	7	137	2.30e-22	90.5
MsG0880042840.01.T01	MTR_4g106680	36.686	169	82	6	31	188	48	202	2.68e-22	92.8
MsG0880042840.01.T01	MTR_5g034790	35.507	138	80	4	33	162	49	185	4.12e-22	93.2
MsG0880042840.01.T01	MTR_8g063660	33.333	144	71	4	32	161	4	136	3.19e-21	90.1
MsG0880042840.01.T01	MTR_5g024730	31.481	162	89	3	33	190	34	177	4.00e-21	87.8
MsG0880042840.01.T01	MTR_6g087150	31.579	190	100	6	6	189	21	186	4.28e-21	90.1
MsG0880042840.01.T01	MTR_4g129420	38.793	116	62	3	48	161	78	186	9.33e-21	90.1
MsG0880042840.01.T01	MTR_3g110190	52.778	72	33	1	94	164	66	137	1.23e-20	88.6
MsG0880042840.01.T01	MTR_4g093830	32.584	178	107	4	34	198	58	235	3.99e-20	87.4
MsG0880042840.01.T01	MTR_3g116000	44.737	76	42	0	94	169	79	154	7.87e-20	83.6
MsG0880042840.01.T01	MTR_8g092960	46.835	79	39	2	94	170	103	180	9.36e-20	84.0
MsG0880042840.01.T01	MTR_8g092840	46.835	79	39	2	94	170	113	190	9.38e-20	84.3
MsG0880042840.01.T01	MTR_8g089880	37.815	119	70	2	93	210	126	241	1.14e-19	85.1
MsG0880042840.01.T01	MTR_1g074190	36.975	119	61	3	57	168	69	180	1.47e-19	85.9
MsG0880042840.01.T01	MTR_1g100737	47.297	74	33	1	94	161	92	165	2.44e-19	82.4
MsG0880042840.01.T01	MTR_5g066250	45.122	82	44	1	81	161	121	202	2.55e-19	85.9
MsG0880042840.01.T01	MTR_6g007737	36.957	138	71	5	33	161	71	201	2.58e-19	85.5
MsG0880042840.01.T01	MTR_8g093010	41.935	93	50	3	80	170	94	184	2.70e-19	82.8
MsG0880042840.01.T01	MTR_7g073200	39.344	122	69	3	64	183	53	171	3.28e-19	81.6
MsG0880042840.01.T01	MTR_2g096350	42.308	104	48	3	64	164	86	180	5.43e-19	82.0
MsG0880042840.01.T01	MTR_3g094000	47.222	72	35	1	94	162	91	162	5.65e-19	81.3
MsG0880042840.01.T01	MTR_3g071300	30.573	157	90	6	21	172	17	159	7.78e-19	80.5
MsG0880042840.01.T01	MTR_1g043410	41.176	102	52	3	73	166	69	170	7.99e-19	83.6
MsG0880042840.01.T01	MTR_3g100400	48.000	75	38	1	94	167	130	204	1.34e-18	83.6
MsG0880042840.01.T01	MTR_2g090950	32.020	203	117	5	16	207	19	211	1.49e-18	81.3
MsG0880042840.01.T01	MTR_8g092930	44.304	79	41	2	94	170	112	189	1.69e-18	80.9
MsG0880042840.01.T01	MTR_8g092985	44.304	79	41	2	94	170	111	188	1.75e-18	80.5
MsG0880042840.01.T01	MTR_7g113800	43.678	87	42	3	85	164	80	166	3.15e-18	82.0
MsG0880042840.01.T01	MTR_4g063070	35.252	139	69	6	37	161	247	378	3.55e-18	82.4
MsG0880042840.01.T01	MTR_3g086730	32.000	175	83	5	31	190	1	154	3.74e-18	80.1
MsG0880042840.01.T01	MTR_8g073120	41.250	80	44	1	94	170	70	149	4.85e-18	79.3
MsG0880042840.01.T01	MTR_3g095560	46.154	78	39	2	94	169	109	185	6.26e-18	79.7
MsG0880042840.01.T01	MTR_5g030010	31.387	137	89	3	32	164	58	193	7.19e-18	81.3
MsG0880042840.01.T01	MTR_3g086700	29.949	197	101	6	31	212	1	175	9.07e-18	78.2
MsG0880042840.01.T01	MTR_1g090480	32.593	135	80	3	33	162	17	145	1.08e-17	77.4
MsG0880042840.01.T01	MTR_5g064990	35.252	139	68	5	30	161	62	185	1.11e-17	80.9
MsG0880042840.01.T01	MTR_6g055030	46.914	81	39	2	94	170	97	177	1.16e-17	80.1
MsG0880042840.01.T01	MTR_3g091620	40.230	87	46	2	83	168	95	176	1.74e-17	80.1
MsG0880042840.01.T01	MTR_3g099650	35.915	142	68	7	30	164	57	182	1.85e-17	80.1
MsG0880042840.01.T01	MTR_7g076250	41.463	82	38	2	82	161	59	132	2.22e-17	77.0
MsG0880042840.01.T01	MTR_1g082550	47.368	76	35	2	94	164	98	173	2.67e-17	79.7
MsG0880042840.01.T01	MTR_2g090905	44.156	77	36	1	95	164	40	116	2.77e-17	75.1
MsG0880042840.01.T01	MTR_7g108855	38.281	128	65	5	72	194	47	165	3.45e-17	76.6
MsG0880042840.01.T01	MTR_5g082940	36.264	91	55	1	80	167	61	151	3.78e-17	76.3
MsG0880042840.01.T01	MTR_2g009310	30.714	140	87	2	32	161	64	203	4.84e-17	79.0
MsG0880042840.01.T01	MTR_4g030070	44.286	70	37	2	93	161	84	152	1.05e-16	76.3
MsG0880042840.01.T01	MTR_2g055790	46.377	69	35	1	94	162	77	143	5.59e-16	73.6
MsG0880042840.01.T01	MTR_8g092990	52.830	53	24	1	118	170	140	191	6.39e-16	73.9
MsG0880042840.01.T01	MTR_1g070140	41.892	74	41	1	94	165	103	176	6.78e-16	75.5
MsG0880042840.01.T01	MTR_8g092970	40.244	82	44	2	118	199	130	206	7.46e-16	73.6
MsG0880042840.01.T01	MTR_5g026730	30.201	149	84	4	20	162	3	137	1.46e-15	72.0
MsG0880042840.01.T01	MTR_4g094725	42.105	76	41	1	94	166	78	153	1.94e-15	71.2
MsG0880042840.01.T01	MTR_3g114500	41.053	95	50	2	74	168	32	120	2.02e-15	70.5
MsG0880042840.01.T01	MTR_1g492830	29.412	136	85	3	28	161	4	130	3.12e-15	72.0
MsG0880042840.01.T01	MTR_1g026070	40.244	82	47	1	94	175	48	127	3.92e-15	69.7
MsG0880042840.01.T01	MTR_3g012550	38.961	77	44	1	89	162	75	151	4.28e-15	70.9
MsG0880042840.01.T01	MTR_8g066780	47.297	74	36	2	94	164	114	187	6.04e-15	72.8
MsG0880042840.01.T01	MTR_6g007680	28.859	149	80	3	33	180	4	127	6.11e-15	69.7
MsG0880042840.01.T01	MTR_5g064980	43.056	72	37	1	94	161	108	179	1.25e-14	72.0
MsG0880042840.01.T01	MTR_7g116220	38.667	75	38	2	94	162	70	142	2.16e-14	68.9
MsG0880042840.01.T01	MTR_2g035800	42.466	73	39	2	94	164	76	147	2.99e-14	68.2
MsG0880042840.01.T01	MTR_8g066740	38.710	93	45	3	94	179	76	163	4.92e-14	69.7
MsG0880042840.01.T01	MTR_5g026720	56.250	48	21	0	115	162	89	136	6.11e-14	67.4
MsG0880042840.01.T01	MTR_4g056590	41.096	73	41	2	94	166	100	170	1.17e-13	67.4
MsG0880042840.01.T01	MTR_7g079280	35.616	73	44	1	93	162	79	151	3.18e-13	65.9
MsG0880042840.01.T01	MTR_8g028465	28.261	138	93	3	29	162	22	157	3.37e-13	66.2
MsG0880042840.01.T01	MTR_7g116180	38.356	73	41	2	94	162	67	139	3.39e-13	65.9
MsG0880042840.01.T01	MTR_7g096690	26.263	198	106	9	31	211	15	189	3.50e-13	67.8
MsG0880042840.01.T01	MTR_1g070425	38.356	73	41	2	94	162	68	140	4.32e-13	65.5
MsG0880042840.01.T01	MTR_3g078450	36.000	75	45	1	91	162	73	147	7.23e-13	65.5
MsG0880042840.01.T01	MTR_8g071815	46.875	64	30	1	119	178	90	153	7.58e-13	64.7
MsG0880042840.01.T01	MTR_5g076990	29.221	154	87	6	31	179	27	163	7.76e-13	66.6
MsG0880042840.01.T01	MTR_5g022920	40.845	71	39	1	94	161	161	231	9.72e-13	65.5
MsG0880042840.01.T01	MTR_7g116200	36.232	69	44	0	94	162	68	136	1.03e-12	64.3
MsG0880042840.01.T01	MTR_1g090460	46.269	67	31	1	102	163	73	139	1.27e-12	63.5
MsG0880042840.01.T01	MTR_6g055030	56.000	50	22	0	121	170	97	146	1.63e-12	65.5
MsG0880042840.01.T01	MTR_7g079290	35.897	78	41	2	94	164	125	200	1.65e-12	64.3
MsG0880042840.01.T01	MTR_8g099495	51.111	45	22	0	119	163	347	391	1.86e-12	65.9
MsG0880042840.01.T01	MTR_2g041200	51.667	60	28	1	106	164	95	154	1.98e-12	63.5
MsG0880042840.01.T01	MTR_6g007670	39.130	69	42	0	100	168	14	82	2.44e-12	64.7
MsG0880042840.01.T01	MTR_7g059360	45.902	61	31	1	107	165	144	204	2.78e-12	64.3
MsG0880042840.01.T01	MTR_4g108830	43.056	72	39	2	94	164	121	191	2.94e-12	63.5
MsG0880042840.01.T01	MTR_3g078470	36.000	75	45	1	91	162	73	147	3.02e-12	63.9
MsG0880042840.01.T01	MTR_4g108830	43.056	72	39	2	94	164	149	219	3.08e-12	63.9
MsG0880042840.01.T01	MTR_8g032690	53.488	43	20	0	119	161	19	61	9.28e-12	60.1
MsG0880042840.01.T01	MTR_4g022410	52.000	50	24	0	116	165	110	159	1.03e-11	62.0
MsG0880042840.01.T01	MTR_3g081030	37.864	103	48	5	73	161	61	161	1.16e-11	62.0
MsG0880042840.01.T01	MTR_1g096780	42.254	71	37	3	94	161	208	277	1.18e-11	63.5
MsG0880042840.01.T01	MTR_3g087900	40.506	79	43	3	118	195	68	143	1.31e-11	60.8
MsG0880042840.01.T01	MTR_5g009210	53.333	45	21	0	119	163	315	359	1.46e-11	63.2
MsG0880042840.01.T01	MTR_2g044570	42.424	66	34	1	103	164	63	128	1.49e-11	62.8
MsG0880042840.01.T01	MTR_5g009200	53.333	45	21	0	119	163	350	394	1.95e-11	62.8
MsG0880042840.01.T01	MTR_7g116210	34.783	69	45	0	94	162	10	78	2.13e-11	59.3
MsG0880042840.01.T01	MTR_4g064550	36.364	110	57	4	77	181	175	276	2.99e-11	61.6
MsG0880042840.01.T01	MTR_8g009190	29.032	124	79	4	98	212	80	203	3.06e-11	62.0
MsG0880042840.01.T01	MTR_8g074900	38.028	71	41	1	94	164	158	225	3.43e-11	60.8
MsG0880042840.01.T01	MTR_5g009190	51.111	45	22	0	119	163	294	338	4.27e-11	61.6
MsG0880042840.01.T01	MTR_5g092790	36.486	74	44	1	94	164	157	230	4.91e-11	60.8
MsG0880042840.01.T01	MTR_5g026260	32.222	90	57	3	85	171	469	557	5.84e-11	61.6
MsG0880042840.01.T01	MTR_2g079320	53.333	45	21	0	118	162	158	202	6.28e-11	60.1
MsG0880042840.01.T01	MTR_8g019710	38.095	105	58	5	100	198	31	134	6.35e-11	58.5
MsG0880042840.01.T01	MTR_3g078120	29.496	139	79	4	32	164	5	130	8.71e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042840.01.T01	AT1G72310	50.000	166	60	2	18	164	11	172	4.20e-55	178
MsG0880042840.01.T01	AT1G53820	57.051	156	48	6	26	167	19	169	9.42e-50	164
MsG0880042840.01.T01	AT3G16720	47.260	146	72	2	22	164	21	164	1.52e-38	135
MsG0880042840.01.T01	AT3G62690	36.667	150	90	2	16	164	13	158	1.12e-26	103
MsG0880042840.01.T01	AT4G15975	42.241	116	55	3	49	164	18	121	1.12e-24	97.4
MsG0880042840.01.T01	AT1G23980	36.296	135	81	3	32	161	52	186	4.98e-24	98.2
MsG0880042840.01.T01	AT5G05280	35.976	164	88	5	1	161	6	155	5.46e-24	94.4
MsG0880042840.01.T01	AT5G17600	33.523	176	109	4	34	208	59	227	6.70e-24	97.8
MsG0880042840.01.T01	AT1G49220	47.170	106	45	4	72	170	84	185	1.56e-23	94.7
MsG0880042840.01.T01	AT3G14320	45.570	79	43	0	92	170	61	139	3.01e-23	93.2
MsG0880042840.01.T01	AT2G47560	36.842	152	82	3	16	164	13	153	4.93e-23	93.2
MsG0880042840.01.T01	AT2G42360	34.932	146	80	2	21	164	21	153	9.17e-22	89.7
MsG0880042840.01.T01	AT1G04360	34.899	149	72	6	31	168	49	183	1.35e-21	91.7
MsG0880042840.01.T01	AT1G20823	33.766	154	85	5	21	169	20	161	2.18e-21	87.8
MsG0880042840.01.T01	AT2G20030	39.437	142	72	4	27	167	44	172	2.40e-21	91.3
MsG0880042840.01.T01	AT3G18773	41.584	101	56	2	94	192	103	202	7.04e-21	87.0
MsG0880042840.01.T01	AT3G48030	33.108	148	95	2	31	176	41	186	9.10e-21	87.8
MsG0880042840.01.T01	AT1G49200	48.810	84	40	2	89	170	104	186	9.27e-21	87.0
MsG0880042840.01.T01	AT4G40070	35.714	154	80	6	28	175	40	180	9.42e-21	88.6
MsG0880042840.01.T01	AT1G49210	50.633	79	36	2	94	170	108	185	1.45e-20	86.7
MsG0880042840.01.T01	AT3G48030	33.108	148	95	2	31	176	119	264	1.82e-20	88.2
MsG0880042840.01.T01	AT1G76410	33.571	140	78	4	32	169	28	154	3.57e-20	84.3
MsG0880042840.01.T01	AT3G10910	43.617	94	50	2	94	185	88	180	5.19e-20	84.0
MsG0880042840.01.T01	AT5G43420	31.707	205	103	8	20	201	31	221	6.20e-20	87.0
MsG0880042840.01.T01	AT5G05810	52.000	75	35	1	94	167	120	194	7.61e-20	87.0
MsG0880042840.01.T01	AT4G28890	44.792	96	50	2	94	188	97	190	1.45e-19	86.7
MsG0880042840.01.T01	AT1G72200	28.767	219	110	6	2	195	36	233	2.99e-19	85.5
MsG0880042840.01.T01	AT4G30400	42.157	102	52	3	65	161	77	176	3.86e-19	85.5
MsG0880042840.01.T01	AT5G40250	34.014	147	73	4	33	161	45	185	5.82e-19	84.3
MsG0880042840.01.T01	AT3G03550	46.667	75	39	1	95	168	134	208	1.81e-18	82.8
MsG0880042840.01.T01	AT5G10380	52.857	70	32	1	93	161	108	177	2.25e-18	82.0
MsG0880042840.01.T01	AT3G19140	40.698	86	45	1	82	161	36	121	2.38e-18	78.6
MsG0880042840.01.T01	AT2G35000	32.353	136	77	3	32	161	51	177	2.49e-18	82.8
MsG0880042840.01.T01	AT4G10150	28.788	198	125	6	17	202	13	206	2.92e-18	80.5
MsG0880042840.01.T01	AT5G01880	45.833	72	38	1	92	162	77	148	3.02e-18	78.6
MsG0880042840.01.T01	AT1G49230	34.483	116	73	2	94	207	104	218	3.83e-18	79.7
MsG0880042840.01.T01	AT2G18650	45.977	87	44	3	82	165	87	173	5.72e-18	82.0
MsG0880042840.01.T01	AT2G27940	31.343	134	89	1	32	162	50	183	6.92e-18	79.7
MsG0880042840.01.T01	AT2G17450	40.777	103	48	3	75	169	55	152	1.00e-17	78.2
MsG0880042840.01.T01	AT5G42200	31.544	149	80	4	19	161	14	146	1.39e-17	77.0
MsG0880042840.01.T01	AT3G05200	37.500	104	56	3	94	188	99	202	1.47e-17	80.5
MsG0880042840.01.T01	AT1G33480	40.698	86	48	1	76	161	60	142	2.15e-17	78.6
MsG0880042840.01.T01	AT4G33565	36.449	107	67	1	84	189	181	287	2.22e-17	79.7
MsG0880042840.01.T01	AT4G10160	42.857	70	40	0	92	161	70	139	2.74e-17	77.8
MsG0880042840.01.T01	AT4G09120	38.144	97	55	2	75	167	76	171	3.85e-17	79.0
MsG0880042840.01.T01	AT4G09110	32.374	139	72	3	33	167	51	171	5.22e-17	78.2
MsG0880042840.01.T01	AT4G17905	41.758	91	50	2	83	170	142	232	5.50e-17	78.6
MsG0880042840.01.T01	AT4G17905	41.758	91	50	2	83	170	116	206	5.72e-17	78.2
MsG0880042840.01.T01	AT1G32361	36.364	99	56	3	69	167	111	202	6.24e-17	78.2
MsG0880042840.01.T01	AT2G42350	30.496	141	82	1	21	161	18	142	7.56e-17	76.3
MsG0880042840.01.T01	AT1G72220	30.935	139	89	3	25	161	86	219	7.64e-17	78.6
MsG0880042840.01.T01	AT5G57750	30.464	151	86	5	21	162	25	165	2.72e-16	74.7
MsG0880042840.01.T01	AT5G27420	41.463	82	44	2	94	171	95	176	2.91e-16	76.6
MsG0880042840.01.T01	AT1G74410	42.500	80	44	2	87	164	142	221	3.50e-16	74.7
MsG0880042840.01.T01	AT2G34990	43.056	72	37	1	94	161	89	160	3.66e-16	76.3
MsG0880042840.01.T01	AT5G07040	39.189	74	42	1	92	162	64	137	3.86e-16	73.2
MsG0880042840.01.T01	AT2G34990	43.056	72	37	1	94	161	67	138	4.40e-16	75.5
MsG0880042840.01.T01	AT4G09130	37.363	91	53	2	82	168	79	169	5.38e-16	75.9
MsG0880042840.01.T01	AT2G35420	43.478	69	38	1	94	161	77	145	2.29e-15	73.2
MsG0880042840.01.T01	AT1G22500	35.897	117	64	3	80	191	75	185	3.16e-15	73.9
MsG0880042840.01.T01	AT4G17920	38.235	102	58	3	94	191	81	181	4.04e-15	72.8
MsG0880042840.01.T01	AT3G18930	37.079	89	44	2	88	164	113	201	6.84e-15	73.2
MsG0880042840.01.T01	AT3G18930	37.079	89	44	2	88	164	113	201	6.84e-15	73.2
MsG0880042840.01.T01	AT3G18930	37.079	89	44	2	88	164	113	201	6.84e-15	73.2
MsG0880042840.01.T01	AT4G09100	44.000	75	38	1	94	164	56	130	6.92e-15	69.3
MsG0880042840.01.T01	AT5G58580	39.286	112	60	3	94	197	111	222	1.99e-14	71.2
MsG0880042840.01.T01	AT1G35330	41.667	72	38	1	94	161	100	171	2.52e-14	70.9
MsG0880042840.01.T01	AT5G46650	31.915	141	77	6	32	161	25	157	6.20e-14	69.3
MsG0880042840.01.T01	AT3G61550	26.250	160	85	5	29	162	27	179	1.60e-13	67.4
MsG0880042840.01.T01	AT3G60220	38.372	86	46	2	84	162	75	160	2.00e-13	68.6
MsG0880042840.01.T01	AT3G11110	30.000	150	88	3	21	168	22	156	3.27e-13	65.5
MsG0880042840.01.T01	AT4G35480	44.828	58	32	0	112	169	106	163	4.76e-13	65.9
MsG0880042840.01.T01	AT1G71980	36.782	87	51	3	94	177	205	290	7.01e-13	67.4
MsG0880042840.01.T01	AT4G24015	40.385	104	50	4	87	179	63	165	7.20e-13	64.7
MsG0880042840.01.T01	AT2G46493	45.833	48	26	0	115	162	134	181	7.38e-13	65.1
MsG0880042840.01.T01	AT2G46160	30.612	98	57	2	76	162	84	181	1.25e-12	64.7
MsG0880042840.01.T01	AT2G46160	30.612	98	57	2	76	162	84	181	1.25e-12	64.7
MsG0880042840.01.T01	AT5G06490	34.615	78	43	1	93	162	95	172	1.33e-12	64.3
MsG0880042840.01.T01	AT2G17730	40.278	72	39	1	94	161	167	238	1.48e-12	65.1
MsG0880042840.01.T01	AT5G53110	36.735	98	54	3	73	162	276	373	1.50e-12	66.2
MsG0880042840.01.T01	AT2G44578	50.980	51	25	0	111	161	62	112	1.57e-12	63.2
MsG0880042840.01.T01	AT2G34000	34.343	99	57	3	73	163	37	135	1.63e-12	63.2
MsG0880042840.01.T01	AT5G66070	42.029	69	39	1	94	162	152	219	1.67e-12	64.7
MsG0880042840.01.T01	AT5G66070	42.029	69	39	1	94	162	152	219	1.67e-12	64.7
MsG0880042840.01.T01	AT5G66070	54.348	46	21	0	117	162	198	243	2.87e-12	64.3
MsG0880042840.01.T01	AT2G46494	47.917	48	25	0	115	162	312	359	3.07e-12	65.1
MsG0880042840.01.T01	AT1G28040	45.833	48	26	0	115	162	249	296	6.61e-12	63.9
MsG0880042840.01.T01	AT5G47610	38.571	70	41	1	97	164	83	152	7.08e-12	62.0
MsG0880042840.01.T01	AT3G20395	36.111	72	45	1	94	165	147	217	7.95e-12	62.8
MsG0880042840.01.T01	AT2G44581	47.059	51	27	0	111	161	62	112	2.51e-11	60.1
MsG0880042840.01.T01	AT2G46495	45.833	48	26	0	115	162	316	363	2.66e-11	62.4
MsG0880042840.01.T01	AT1G22670	30.159	126	75	4	94	207	205	329	2.79e-11	62.4
MsG0880042840.01.T01	AT2G46495	45.833	48	26	0	115	162	288	335	2.95e-11	62.4
MsG0880042840.01.T01	AT3G60966	60.465	43	17	0	119	161	62	104	3.02e-11	59.7
MsG0880042840.01.T01	AT4G35840	38.889	72	40	1	94	161	162	233	5.62e-11	60.5
MsG0880042840.01.T01	AT1G55530	34.343	99	53	3	84	178	195	285	6.03e-11	61.2
MsG0880042840.01.T01	AT1G55530	34.343	99	53	3	84	178	195	285	6.03e-11	61.2
MsG0880042840.01.T01	AT1G55530	34.343	99	53	3	84	178	162	252	6.83e-11	61.2
MsG0880042840.01.T01	AT2G35910	39.130	69	41	1	94	161	121	189	8.07e-11	60.1

Find 35 sgRNAs with CRISPR-Local

Find 46 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTCAAGATCCTGTTGTTTA+TGG	0.168039	8:-14751187	MsG0880042840.01.T01:CDS
CCATTTGAATCAGTACTATT+TGG	0.192512	8:+14750920	None:intergenic
TCTTAAGTCTTTGCCTGTTT+TGG	0.218884	8:-14751134	MsG0880042840.01.T01:CDS
TGAAACCCATGATTGCATTT+TGG	0.226368	8:+14751025	None:intergenic
CGTCGACGACGGCGGTTTCT+TGG	0.237232	8:+14751229	None:intergenic
ATTCTACTTGTCCTCTTTGT+AGG	0.257676	8:-14750970	MsG0880042840.01.T01:CDS
ATTTATATGCAAAGTGGTTT+TGG	0.278266	8:-14751282	MsG0880042840.01.T01:CDS
TTCCTACAAATGTTTGGTTT+GGG	0.279024	8:-14750824	MsG0880042840.01.T01:CDS
TTTCCTACAAATGTTTGGTT+TGG	0.314688	8:-14750825	MsG0880042840.01.T01:CDS
GTTTATGGAAGTCACCAAAT+TGG	0.322819	8:-14751172	MsG0880042840.01.T01:CDS
TCAAATTTCCTACAAATGTT+TGG	0.345357	8:-14750830	MsG0880042840.01.T01:CDS
TGAGGATTTCAAAGATGGTT+TGG	0.348325	8:-14751101	MsG0880042840.01.T01:CDS
AAAGGGTCAGGTGATGTATT+AGG	0.362982	8:-14751394	MsG0880042840.01.T01:CDS
GCAACTGCAACTGCAACAAA+AGG	0.394252	8:-14751412	MsG0880042840.01.T01:CDS
AAGAATGAGGATTTCAAAGA+TGG	0.398458	8:-14751106	MsG0880042840.01.T01:CDS
TCTAATACAGTTGAAATAAC+AGG	0.400393	8:-14751367	MsG0880042840.01.T01:CDS
TGTCTTTGTGATGTTGTTGA+AGG	0.438454	8:-14751067	MsG0880042840.01.T01:CDS
TCATTCTTGAAAACCAAAAC+AGG	0.442504	8:+14751121	None:intergenic
ATTTAGATTGTATTGATATG+TGG	0.449698	8:-14751003	MsG0880042840.01.T01:CDS
TGGTGACTTCCATAAACAAC+AGG	0.454316	8:+14751178	None:intergenic
CGACGGCGGTTTCTTGGTTG+AGG	0.455007	8:+14751235	None:intergenic
CCAAATAGTACTGATTCAAA+TGG	0.506743	8:-14750920	MsG0880042840.01.T01:CDS
CCTACAAATGTTTGGTTTGG+GGG	0.521723	8:-14750822	MsG0880042840.01.T01:CDS
TCCTACAAATGTTTGGTTTG+GGG	0.534899	8:-14750823	MsG0880042840.01.T01:CDS
AAACAAACCGCCGTCGACGA+CGG	0.534947	8:+14751218	None:intergenic
TGCTTCATTTATATGCAAAG+TGG	0.539115	8:-14751288	MsG0880042840.01.T01:CDS
GCAACTGCAACAAAAGGGTC+AGG	0.546145	8:-14751406	MsG0880042840.01.T01:CDS
CAACTGCAACTGCAACAAAA+GGG	0.548726	8:-14751411	MsG0880042840.01.T01:CDS
GAAACTAAATTCCTACAAAG+AGG	0.564972	8:+14750959	None:intergenic
CAAGAAACCGCCGTCGTCGA+CGG	0.576823	8:-14751228	MsG0880042840.01.T01:CDS
GAAAATTTGAGTCATGTGAA+TGG	0.596814	8:-14750863	MsG0880042840.01.T01:CDS
CAAACCGCCGTCGACGACGG+CGG	0.650391	8:+14751221	None:intergenic
GAAACCGCCGTCGTCGACGG+CGG	0.652134	8:-14751225	MsG0880042840.01.T01:CDS
TAAACAACAGGATCTTGACC+AGG	0.667684	8:+14751190	None:intergenic
AATGTGTTAGTGTCATCAGA+AGG	0.695473	8:-14750887	MsG0880042840.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAAATAACAGGAAAAATTA+TGG	-	Chr8:14750876-14750895	MsG0880042840.01.T01:CDS	20.0%
!!!	AGCAATAATTTTTCTATTCA+TGG	-	Chr8:14750903-14750922	MsG0880042840.01.T01:CDS	20.0%
!!!	ATTTAGATTGTATTGATATG+TGG	-	Chr8:14751229-14751248	MsG0880042840.01.T01:CDS	20.0%
!	TCAAATTTCCTACAAATGTT+TGG	-	Chr8:14751402-14751421	MsG0880042840.01.T01:CDS	25.0%
!	TCTAATACAGTTGAAATAAC+AGG	-	Chr8:14750865-14750884	MsG0880042840.01.T01:CDS	25.0%
!!	ATTTATATGCAAAGTGGTTT+TGG	-	Chr8:14750950-14750969	MsG0880042840.01.T01:CDS	25.0%
!!	TTTTACCAAAATGCAATCAT+GGG	-	Chr8:14751202-14751221	MsG0880042840.01.T01:CDS	25.0%
	AAGAATGAGGATTTCAAAGA+TGG	-	Chr8:14751126-14751145	MsG0880042840.01.T01:CDS	30.0%
	CCATTTGAATCAGTACTATT+TGG	+	Chr8:14751315-14751334	None:intergenic	30.0%
	GAAAATTTGAGTCATGTGAA+TGG	-	Chr8:14751369-14751388	MsG0880042840.01.T01:CDS	30.0%
	GAAACTAAATTCCTACAAAG+AGG	+	Chr8:14751276-14751295	None:intergenic	30.0%
	TCATTCTTGAAAACCAAAAC+AGG	+	Chr8:14751114-14751133	None:intergenic	30.0%
	TGCTTCATTTATATGCAAAG+TGG	-	Chr8:14750944-14750963	MsG0880042840.01.T01:CDS	30.0%
	TTGTTGAAGGAGAAAAAACT+AGG	-	Chr8:14751178-14751197	MsG0880042840.01.T01:CDS	30.0%
	TTTCCTACAAATGTTTGGTT+TGG	-	Chr8:14751407-14751426	MsG0880042840.01.T01:CDS	30.0%
!	CTTTTACCAAAATGCAATCA+TGG	-	Chr8:14751201-14751220	MsG0880042840.01.T01:CDS	30.0%
!	TTCCTACAAATGTTTGGTTT+GGG	-	Chr8:14751408-14751427	MsG0880042840.01.T01:CDS	30.0%
!!	CCAAATAGTACTGATTCAAA+TGG	-	Chr8:14751312-14751331	MsG0880042840.01.T01:CDS	30.0%
!!!	TGTTTTGGTTTTCAAGAATG+AGG	-	Chr8:14751113-14751132	MsG0880042840.01.T01:CDS	30.0%
!!!	TTTTAGCTTCAAGTCCAATT+TGG	+	Chr8:14751077-14751096	None:intergenic	30.0%
	AATGTGTTAGTGTCATCAGA+AGG	-	Chr8:14751345-14751364	MsG0880042840.01.T01:CDS	35.0%
	ATTCTACTTGTCCTCTTTGT+AGG	-	Chr8:14751262-14751281	MsG0880042840.01.T01:CDS	35.0%
	GTTTATGGAAGTCACCAAAT+TGG	-	Chr8:14751060-14751079	MsG0880042840.01.T01:CDS	35.0%
	TGAGGATTTCAAAGATGGTT+TGG	-	Chr8:14751131-14751150	MsG0880042840.01.T01:CDS	35.0%
	TGTCTTTGTGATGTTGTTGA+AGG	-	Chr8:14751165-14751184	MsG0880042840.01.T01:CDS	35.0%
!	TCTTAAGTCTTTGCCTGTTT+TGG	-	Chr8:14751098-14751117	MsG0880042840.01.T01:CDS	35.0%
!	TGAAACCCATGATTGCATTT+TGG	+	Chr8:14751210-14751229	None:intergenic	35.0%
!!	TCCTACAAATGTTTGGTTTG+GGG	-	Chr8:14751409-14751428	MsG0880042840.01.T01:CDS	35.0%
!!!	TATATGCAAAGTGGTTTTGG+TGG	-	Chr8:14750953-14750972	MsG0880042840.01.T01:CDS	35.0%
	AAAGGGTCAGGTGATGTATT+AGG	-	Chr8:14750838-14750857	MsG0880042840.01.T01:CDS	40.0%
	CAACTGCAACTGCAACAAAA+GGG	-	Chr8:14750821-14750840	MsG0880042840.01.T01:CDS	40.0%
	TAAACAACAGGATCTTGACC+AGG	+	Chr8:14751045-14751064	None:intergenic	40.0%
	TGGTGACTTCCATAAACAAC+AGG	+	Chr8:14751057-14751076	None:intergenic	40.0%
!	GGTCAAGATCCTGTTGTTTA+TGG	-	Chr8:14751045-14751064	MsG0880042840.01.T01:CDS	40.0%
!!	CCTACAAATGTTTGGTTTGG+GGG	-	Chr8:14751410-14751429	MsG0880042840.01.T01:CDS	40.0%
	CCCCCAAACCAAACATTTGT+AGG	+	Chr8:14751413-14751432	None:intergenic	45.0%
	GCAACTGCAACTGCAACAAA+AGG	-	Chr8:14750820-14750839	MsG0880042840.01.T01:CDS	45.0%
	GCAACTGCAACAAAAGGGTC+AGG	-	Chr8:14750826-14750845	MsG0880042840.01.T01:CDS	50.0%
!!!	GTGGTTTTGGTGGCGTTTTG+AGG	-	Chr8:14750963-14750982	MsG0880042840.01.T01:CDS	50.0%
	AAACAAACCGCCGTCGACGA+CGG	+	Chr8:14751017-14751036	None:intergenic	55.0%
!!!	CGGCGGTTTGTTTTTGCTCC+TGG	-	Chr8:14751024-14751043	MsG0880042840.01.T01:CDS	55.0%
	CAAGAAACCGCCGTCGTCGA+CGG	-	Chr8:14751004-14751023	MsG0880042840.01.T01:CDS	60.0%
	CGACGGCGGTTTCTTGGTTG+AGG	+	Chr8:14751000-14751019	None:intergenic	60.0%
	CGTCGACGACGGCGGTTTCT+TGG	+	Chr8:14751006-14751025	None:intergenic	65.0%
	CAAACCGCCGTCGACGACGG+CGG	+	Chr8:14751014-14751033	None:intergenic	70.0%
	GAAACCGCCGTCGTCGACGG+CGG	-	Chr8:14751007-14751026	MsG0880042840.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	14750802	14751452	14750802	ID=MsG0880042840.01;Name=MsG0880042840.01
Chr8	mRNA	14750802	14751452	14750802	ID=MsG0880042840.01.T01;Parent=MsG0880042840.01;Name=MsG0880042840.01.T01;_AED=0.33;_eAED=0.35;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|216
Chr8	exon	14750802	14751452	14750802	ID=MsG0880042840.01.T01:exon:36969;Parent=MsG0880042840.01.T01
Chr8	CDS	14750802	14751452	14750802	ID=MsG0880042840.01.T01:cds;Parent=MsG0880042840.01.T01

Gene Sequence

>MsG0880042840.01.T01

ATGGGTGCAACTGCAGCTGCAACTGCAACTGCAACAAAAGGGTCAGGTGATGTATTAGGTGATTCTAATACAGTTGAAATAACAGGAAAAATTATGGTTTTAGCAATAATTTTTCTATTCATGGTTGTTATGTTTGTTCTAATGCTTCATTTATATGCAAAGTGGTTTTGGTGGCGTTTTGAGGAAAGAACTGTTCCTCAACCAAGAAACCGCCGTCGTCGACGGCGGTTTGTTTTTGCTCCTGGTCAAGATCCTGTTGTTTATGGAAGTCACCAAATTGGACTTGAAGCTAAAATTCTTAAGTCTTTGCCTGTTTTGGTTTTCAAGAATGAGGATTTCAAAGATGGTTTGGAATGTGCTGTTTGTCTTTGTGATGTTGTTGAAGGAGAAAAAACTAGGCTTTTACCAAAATGCAATCATGGGTTTCATTTAGATTGTATTGATATGTGGTTTCAATCTCATTCTACTTGTCCTCTTTGTAGGAATTTAGTTTCTGTTGAATCATGTAAACCAAATAGTACTGATTCAAATGGTGAAGAGATGAATGTGTTAGTGTCATCAGAAGGTGAAAATTTGAGTCATGTGAATGGTCTAGAGTCTTCAAATTTCCTACAAATGTTTGGTTTGGGGGAATTCTCAAACACAAGTTAG

Protein sequence

>MsG0880042840.01.T01

MGATAAATATATKGSGDVLGDSNTVEITGKIMVLAIIFLFMVVMFVLMLHLYAKWFWWRFEERTVPQPRNRRRRRRFVFAPGQDPVVYGSHQIGLEAKILKSLPVLVFKNEDFKDGLECAVCLCDVVEGEKTRLLPKCNHGFHLDCIDMWFQSHSTCPLCRNLVSVESCKPNSTDSNGEEMNVLVSSEGENLSHVNGLESSNFLQMFGLGEFSNTS*