AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005050.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005050.01.T01 MTR_1g492940 88.426 1080 63 9 9 1029 2 1078 0.0 1920
MsG0180005050.01.T01 MTR_1g492940 87.083 960 62 9 9 909 2 958 0.0 1674
MsG0180005050.01.T01 MTR_1g492940 84.167 960 61 10 9 909 2 929 0.0 1601
MsG0180005050.01.T01 MTR_1g492940 85.514 856 62 9 9 805 2 854 0.0 1448
MsG0180005050.01.T01 MTR_1g103740 32.571 175 114 2 766 937 210 383 5.11e-23 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005050.01.T01 AT3G22430 33.205 259 159 5 766 1015 253 506 2.76e-36 145

Find 314 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTTTCTGATACCTTCTT+TGG 0.153676 1:-86188090 None:intergenic
CTTATGTATGAACATCTATT+TGG 0.184429 1:+86190811 MsG0180005050.01.T01:three_prime_UTR
CATCAGACATTGAAATATTA+TGG 0.194619 1:-86189743 None:intergenic
ATATTCCTCTGCCCAATTTC+AGG 0.199663 1:-86186848 None:intergenic
ACTTCTCACTTGAGGGATTA+TGG 0.231283 1:+86186662 MsG0180005050.01.T01:CDS
GATATCACCTCAAGTTTCTA+TGG 0.245398 1:+86187751 MsG0180005050.01.T01:CDS
ACCTTCTCTCCTTTGAAATA+TGG 0.245417 1:+86190853 MsG0180005050.01.T01:three_prime_UTR
ACTAGTAGGGGTCCTGAAAT+TGG 0.249442 1:+86186836 MsG0180005050.01.T01:CDS
AAAAGGAGGATTTGATTCTT+TGG 0.251535 1:+86189703 MsG0180005050.01.T01:CDS
AAAGAATCAAATCCTCCTTT+TGG 0.267139 1:-86189701 None:intergenic
TAGCTCTCATCCCAGCCTTA+TGG 0.274500 1:-86189566 None:intergenic
TATGCTGCCTGTATATCTTA+TGG 0.277887 1:-86187676 None:intergenic
TGATTATGAAGTTTCATATC+TGG 0.278807 1:+86187286 MsG0180005050.01.T01:CDS
CTTGGGCACATTTGTTGGGC+TGG 0.303602 1:+86190188 MsG0180005050.01.T01:CDS
TGACGACGACGACGAAAATT+TGG 0.309438 1:+86185998 MsG0180005050.01.T01:CDS
TGTAAAATCCTTTGCGTAAG+AGG 0.311586 1:-86186636 None:intergenic
TACTATTCTGGTGAAGTTCT+TGG 0.313599 1:+86190170 MsG0180005050.01.T01:CDS
CTTGCCCCATGCTGAAGCTT+TGG 0.318142 1:+86189677 MsG0180005050.01.T01:CDS
AGGAGAGAAGGTGCCTAAAA+AGG 0.318664 1:-86190842 None:intergenic
TAGGTTCAGATTCAAGTTCT+TGG 0.323338 1:-86188062 None:intergenic
CAATTTAATTTGTGATGTAT+TGG 0.324578 1:+86190879 MsG0180005050.01.T01:three_prime_UTR
AGTACTTCACCATCAACTTC+AGG 0.328370 1:+86185927 MsG0180005050.01.T01:CDS
TCATGCATAATACCCCTTCT+TGG 0.334991 1:-86187125 None:intergenic
AAACTGGAAGGTTATAAGTA+TGG 0.336011 1:+86189776 MsG0180005050.01.T01:CDS
TAGATTTCAATAGCAAGAAT+TGG 0.337717 1:+86190385 MsG0180005050.01.T01:CDS
ATTCGGGTCCTGACCCGTTT+AGG 0.341102 1:+86185673 MsG0180005050.01.T01:CDS
ATGAAACGTGTTTATCTTGA+TGG 0.341588 1:+86186023 MsG0180005050.01.T01:CDS
TCTCGAAGAGATGGCGCTCC+AGG 0.342353 1:+86187359 MsG0180005050.01.T01:CDS
ACGAACATCTATTTCTTCAT+TGG 0.343129 1:-86187525 None:intergenic
AGGACCCCTACTAGTGTCTA+TGG 0.344367 1:-86186828 None:intergenic
AAGTTCTTGGGCACATTTGT+TGG 0.346615 1:+86190183 MsG0180005050.01.T01:CDS
GGTAAGAGTGAAGATTATTA+TGG 0.347319 1:+86187098 MsG0180005050.01.T01:CDS
CTTTCCCACACATGTATTCA+TGG 0.350550 1:-86190762 None:intergenic
AACATCAATTCAATCAAAAC+AGG 0.351689 1:+86187205 MsG0180005050.01.T01:CDS
GGTGATGGCTATTTGCGTTC+TGG 0.360484 1:+86187227 MsG0180005050.01.T01:CDS
CTCAGAGCCCTCAGTTGGCT+CGG 0.366081 1:-86187999 None:intergenic
AGTTAGCAGTTCTTGTATAC+AGG 0.367677 1:+86190563 MsG0180005050.01.T01:three_prime_UTR
TACCCAGCAAAGGGTTGATT+CGG 0.372041 1:+86185656 MsG0180005050.01.T01:CDS
GAATCCCACGGTGGAGGAAC+AGG 0.375778 1:+86186389 MsG0180005050.01.T01:CDS
AAATTGGGCAGAGGAATATT+AGG 0.376917 1:+86186852 MsG0180005050.01.T01:CDS
CTGATGACAATCCTCAAAAC+TGG 0.376922 1:+86189760 MsG0180005050.01.T01:CDS
GAATCCCACGGTGAGGGAAC+AGG 0.376937 1:+86186476 MsG0180005050.01.T01:CDS
TCATTTAAATACAAGGGTTA+AGG 0.384541 1:+86190693 MsG0180005050.01.T01:three_prime_UTR
AGAGGGAGATAATGTGGAAT+AGG 0.386699 1:-86186618 None:intergenic
GACCCGAATCAACCCTTTGC+TGG 0.389412 1:-86185659 None:intergenic
TTGGGCACATTTGTTGGGCT+GGG 0.390607 1:+86190189 MsG0180005050.01.T01:CDS
CCACCATGGGATTCTGTAAT+GGG 0.391737 1:-86186293 None:intergenic
CAGGAAGGATATTGATGATC+TGG 0.394028 1:+86190422 MsG0180005050.01.T01:CDS
CCTTTGCTGGGTACGCAACT+TGG 0.395916 1:-86185646 None:intergenic
TATGAAACTTCATAATCATT+TGG 0.397981 1:-86187281 None:intergenic
TGCTGAAGCTTTGGCCCAAA+AGG 0.398735 1:+86189686 MsG0180005050.01.T01:CDS
CCACCGTGGGATTCTGTAAT+GGG 0.399704 1:-86186380 None:intergenic
TGTGGCAATTGCAGAGGACT+TGG 0.400070 1:+86190356 MsG0180005050.01.T01:CDS
GATTTGATTGAAAGCAGATT+AGG 0.400639 1:+86186053 MsG0180005050.01.T01:CDS
AGCTCTCATCCCAGCCTTAT+GGG 0.401015 1:-86189565 None:intergenic
CAAAGCAATATGTGTTATGA+TGG 0.402079 1:+86189605 MsG0180005050.01.T01:CDS
AATATCTTTCTGATAGCAAC+CGG 0.402101 1:+86190232 MsG0180005050.01.T01:CDS
TTACCAGTTCTATCTAAATC+TGG 0.403124 1:-86187080 None:intergenic
AAGTTCATATAGGTCTATTC+CGG 0.403247 1:+86186130 MsG0180005050.01.T01:CDS
GTTCATACATAAGCTAACTA+TGG 0.405200 1:-86190801 None:intergenic
AGATGATGAAGACATGAATA+TGG 0.405985 1:+86187625 MsG0180005050.01.T01:CDS
TAACTATGGAGGGAACAAAT+TGG 0.409036 1:-86190787 None:intergenic
AGCAAAAGGGGTGGTGGTGA+TGG 0.410695 1:+86185780 MsG0180005050.01.T01:CDS
TGCAGACCAAAGTACTATTC+TGG 0.411266 1:+86190158 MsG0180005050.01.T01:CDS
TTGAGAAGTGAAAATGAAGT+TGG 0.411832 1:+86186107 MsG0180005050.01.T01:CDS
TATAGGTCTATTCCGGATAC+TGG 0.412175 1:+86186137 MsG0180005050.01.T01:CDS
GCAGAAGGTGCAGGGTTTAG+TGG 0.417580 1:+86186788 MsG0180005050.01.T01:CDS
CAGTTCCTCAAAGGAATTCA+TGG 0.417940 1:+86189509 MsG0180005050.01.T01:intron
GGACGAATCAAATTATGCTT+AGG 0.419599 1:+86190129 MsG0180005050.01.T01:CDS
CAAAGTCTAGTTCATCAAAC+TGG 0.423080 1:+86187837 MsG0180005050.01.T01:CDS
AACCTTTCTTGCTGATGCCC+TGG 0.424265 1:-86187377 None:intergenic
ACTATTCTGGTGAAGTTCTT+GGG 0.424626 1:+86190171 MsG0180005050.01.T01:CDS
TACAGGTACTTCTCACTTGA+GGG 0.428689 1:+86186655 MsG0180005050.01.T01:CDS
TCACGACGGTTTCTCCTAAA+CGG 0.429363 1:-86185687 None:intergenic
TCAGGGTTGAGACCTAGATA+TGG 0.430452 1:+86185945 MsG0180005050.01.T01:CDS
AGTTCTTGGGCACATTTGTT+GGG 0.431898 1:+86190184 MsG0180005050.01.T01:CDS
TGTTATTTCATTTAAATACA+AGG 0.435022 1:+86190686 MsG0180005050.01.T01:three_prime_UTR
CCAGCTGGCACACTCCTTGA+CGG 0.438403 1:-86186215 None:intergenic
ACAATTGAGGCGTTTATAAG+AGG 0.441319 1:+86189801 MsG0180005050.01.T01:CDS
GATCCAACCATAAGATATAC+AGG 0.441421 1:+86187669 MsG0180005050.01.T01:CDS
GAGTTGGCAGTGGTAGCAAA+AGG 0.443006 1:+86185766 MsG0180005050.01.T01:CDS
GTGGATGGAGTTAGAAGAGT+TGG 0.443260 1:+86185750 MsG0180005050.01.T01:CDS
TTCTGATACCTTCTTTGGAC+AGG 0.443740 1:-86188085 None:intergenic
CTAGTAGGGGTCCTGAAATT+GGG 0.443796 1:+86186837 MsG0180005050.01.T01:CDS
CTTCAGCATGGGGCAAGACC+TGG 0.444206 1:-86189671 None:intergenic
TTGAAGGGAGGGATTCTGAT+TGG 0.445016 1:+86185805 MsG0180005050.01.T01:CDS
TCACCGTGGGATTCTGTGAT+GGG 0.447702 1:-86186467 None:intergenic
CTCACCGTGGGATTCTGTGA+TGG 0.451047 1:-86186468 None:intergenic
CCCACCATGGGATTCTGTAA+TGG 0.451138 1:-86186294 None:intergenic
TAGTGTCTATGGGTGGCCTT+TGG 0.452562 1:-86186817 None:intergenic
AAATACAATGAGTTGGAGAA+TGG 0.462746 1:+86187704 MsG0180005050.01.T01:CDS
CATCCAGATTTAGATAGAAC+TGG 0.465531 1:+86187077 MsG0180005050.01.T01:CDS
GGCCACCCATAGACACTAGT+AGG 0.465673 1:+86186822 MsG0180005050.01.T01:CDS
TATGTTGGATCCTGCGATGC+AGG 0.466035 1:-86187158 None:intergenic
GGTCTCAACCCTGAAGTTGA+TGG 0.468413 1:-86185936 None:intergenic
TCCACCGTGGGATTCTGTAA+TGG 0.470224 1:-86186381 None:intergenic
CTCCAGGGCATCAGCAAGAA+AGG 0.470589 1:+86187375 MsG0180005050.01.T01:CDS
GATTCTGATTGGCATTTGAA+TGG 0.473068 1:+86185816 MsG0180005050.01.T01:CDS
ATCACTCCTCCTCGTTTCCA+TGG 0.474968 1:-86186693 None:intergenic
TACTTCTGAAATCGAAATGA+TGG 0.474975 1:-86187788 None:intergenic
CCACTATGGGATTGTGTGAT+GGG 0.475618 1:-86186554 None:intergenic
GATATTTGATGATATGCCTC+TGG 0.476891 1:-86187314 None:intergenic
TGTTTATCTTGATGGAGATA+AGG 0.477076 1:+86186031 MsG0180005050.01.T01:CDS
GGAAAACTTGCAGAAGGTGC+AGG 0.477723 1:+86186779 MsG0180005050.01.T01:CDS
CCGTCAAGGAGTGTGCCAGC+TGG 0.478784 1:+86186215 MsG0180005050.01.T01:CDS
GACGAATCAAATTATGCTTA+GGG 0.479482 1:+86190130 MsG0180005050.01.T01:CDS
CACGACGGTTTCTCCTAAAC+GGG 0.481176 1:-86185686 None:intergenic
ACCCAGCAAAGGGTTGATTC+GGG 0.481562 1:+86185657 MsG0180005050.01.T01:CDS
TTCAGCATGGGGCAAGACCT+GGG 0.482729 1:-86189670 None:intergenic
AGAACTGCTAACTTAAGTAT+AGG 0.487013 1:-86190553 None:intergenic
AGAATAGTACTTTGGTCTGC+AGG 0.487298 1:-86190156 None:intergenic
TAACATTGAAGAGACAGATC+AGG 0.487630 1:+86190302 MsG0180005050.01.T01:CDS
TCATGATAGTCTACATATGT+TGG 0.489317 1:-86187173 None:intergenic
TTTAGGAGAAACCGTCGTGA+TGG 0.491905 1:+86185690 MsG0180005050.01.T01:CDS
CTGTTGATCAAATGAGGAAA+AGG 0.494442 1:+86185874 MsG0180005050.01.T01:CDS
TACAGTAACCTGGGTTCCCC+AGG 0.495394 1:+86189653 MsG0180005050.01.T01:CDS
GGATATTGATGATCTGGATA+AGG 0.498399 1:+86190428 MsG0180005050.01.T01:CDS
CAGGGAGATTTGAGCATGAA+AGG 0.498596 1:+86186408 MsG0180005050.01.T01:CDS
TTTGGGCCAAAGCTTCAGCA+TGG 0.500106 1:-86189683 None:intergenic
TTAGGAGAAACCGTCGTGAT+GGG 0.500425 1:+86185691 MsG0180005050.01.T01:CDS
AAGGACTTAACTCACATTGA+TGG 0.501202 1:-86186880 None:intergenic
TCAGAGCCCTCAGTTGGCTC+GGG 0.502509 1:-86187998 None:intergenic
CCCATCACACAATCCCATAG+TGG 0.503039 1:+86186554 MsG0180005050.01.T01:CDS
CGTCAAGGAGTGTGCCAGCT+GGG 0.504102 1:+86186216 MsG0180005050.01.T01:CDS
ACTTCACCAGAATAGTACTT+TGG 0.504806 1:-86190164 None:intergenic
CAAGTGGTAGGGTTCAATCT+AGG 0.504955 1:+86185844 MsG0180005050.01.T01:CDS
ACACTTACACCACCAGTATC+CGG 0.506546 1:-86186149 None:intergenic
TAAGAATAAATACAATGAGT+TGG 0.509334 1:+86187697 MsG0180005050.01.T01:CDS
TCATCAATTGTGGATGGCCT+TGG 0.509510 1:-86190731 None:intergenic
GCAGTTCTTGTATACAGGAC+AGG 0.510407 1:+86190568 MsG0180005050.01.T01:three_prime_UTR
CTGGGAGATTTGAGCATGAA+AGG 0.510967 1:+86186234 MsG0180005050.01.T01:CDS
GCATAACCACCCTGCATCGC+AGG 0.511022 1:+86187148 MsG0180005050.01.T01:CDS
CCCACTATGGGATTGTGTGA+TGG 0.512039 1:-86186555 None:intergenic
CACTCTGCCAGCTTGTCTGT+AGG 0.513950 1:-86187435 None:intergenic
TATCAGAAACAAGGAAAAGC+TGG 0.514659 1:+86188100 MsG0180005050.01.T01:CDS
TTTCCCACACATGTATTCAT+GGG 0.515246 1:-86190761 None:intergenic
CTTTGCTGGGTACGCAACTT+GGG 0.517439 1:-86185645 None:intergenic
GTACTTCACCATCAACTTCA+GGG 0.517769 1:+86185928 MsG0180005050.01.T01:CDS
CTCCTCCTGTTGATCAAATG+AGG 0.518702 1:+86185868 MsG0180005050.01.T01:CDS
CGGTTTCTCCTAAACGGGTC+AGG 0.519772 1:-86185681 None:intergenic
TTGGGCCAAAGCTTCAGCAT+GGG 0.519858 1:-86189682 None:intergenic
GTTACAGCTTGTGACCCCTC+CGG 0.520746 1:-86190283 None:intergenic
ACCCGAATCAACCCTTTGCT+GGG 0.522594 1:-86185658 None:intergenic
ACTGCATCGTATGTGGTAGA+AGG 0.522642 1:+86188131 MsG0180005050.01.T01:CDS
CTGCCTGTATATCTTATGGT+TGG 0.523970 1:-86187672 None:intergenic
ATTATTATGGAAATCCAAGA+AGG 0.524810 1:+86187111 MsG0180005050.01.T01:CDS
GTGATGGGTTTCCTATCCAC+AGG 0.525869 1:-86186452 None:intergenic
GGAGTTAGAAGAGTTGGCAG+TGG 0.526267 1:+86185756 MsG0180005050.01.T01:CDS
TGATGGGTTGGATCCGTCGC+CGG 0.526918 1:+86185707 MsG0180005050.01.T01:CDS
TTCAGAGGACTCAATTTCAC+CGG 0.528835 1:-86185726 None:intergenic
TTATTATGAAAGTGAAGAGT+GGG 0.529170 1:+86187601 MsG0180005050.01.T01:CDS
ATGAAGTTGGAAGTTCATAT+AGG 0.529341 1:+86186120 MsG0180005050.01.T01:CDS
ATTGGAGTACGGTAAAGAGC+AGG 0.530763 1:+86190403 MsG0180005050.01.T01:CDS
GACAGATCAGGGAGACAAAG+TGG 0.531730 1:+86190314 MsG0180005050.01.T01:CDS
TTACAGGTACTTCTCACTTG+AGG 0.534120 1:+86186654 MsG0180005050.01.T01:CDS
TTGATTGAAAGCAGATTAGG+TGG 0.537390 1:+86186056 MsG0180005050.01.T01:CDS
GGTGGTGGTGATGGATTTGA+AGG 0.537679 1:+86185789 MsG0180005050.01.T01:CDS
CTGTTAAAACCGACGAGAGG+CGG 0.537706 1:+86190454 MsG0180005050.01.T01:CDS
TGAACCTACCTGTCCAAAGA+AGG 0.538300 1:+86188077 MsG0180005050.01.T01:CDS
TCATGCTCAAATCTCCCAGC+TGG 0.538349 1:-86186230 None:intergenic
CAATAGCAAGAATTGGAGTA+CGG 0.538887 1:+86190392 MsG0180005050.01.T01:CDS
CAGGGTTGAGACCTAGATAT+GGG 0.539027 1:+86185946 MsG0180005050.01.T01:CDS
GATACCTTCTTTGGACAGGT+AGG 0.540326 1:-86188081 None:intergenic
ATTGAAAGCAGATTAGGTGG+TGG 0.541045 1:+86186059 MsG0180005050.01.T01:CDS
GGCGTTTGCCTCCACCGTCA+AGG 0.541534 1:+86186201 MsG0180005050.01.T01:CDS
GGCACACTCCTTGACGGTGG+AGG 0.543168 1:-86186209 None:intergenic
TGAATGGTAGAACAAGTGGT+AGG 0.545441 1:+86185832 MsG0180005050.01.T01:CDS
AGTGTCCATGAATTCCTTTG+AGG 0.546295 1:-86189514 None:intergenic
CAATATGTGTTATGATGGGA+TGG 0.546565 1:+86189610 MsG0180005050.01.T01:CDS
GTTATTTCATTTAAATACAA+GGG 0.547305 1:+86190687 MsG0180005050.01.T01:three_prime_UTR
GTGATGGGTTTCCTATCCAC+AGG 0.548064 1:-86186539 None:intergenic
GAGAAACCGTCGTGATGGGT+TGG 0.548181 1:+86185695 MsG0180005050.01.T01:CDS
TTTCTATGCTCGCATGGTGA+TGG 0.548274 1:+86186716 MsG0180005050.01.T01:CDS
AGTGGTAGCAAAAGGGGTGG+TGG 0.550703 1:+86185774 MsG0180005050.01.T01:CDS
GGACCCCTACTAGTGTCTAT+GGG 0.551236 1:-86186827 None:intergenic
CCATTACAGAATCCCATGGT+GGG 0.551520 1:+86186294 MsG0180005050.01.T01:CDS
CAAGTTGCGTACCCAGCAAA+GGG 0.551699 1:+86185647 MsG0180005050.01.T01:CDS
TATCCACGGGCAAATGCTCT+CGG 0.552610 1:-86186265 None:intergenic
TATCCACAGGCAAATGCTCT+CGG 0.553255 1:-86186439 None:intergenic
TGCAGAACCCGAGCCAACTG+AGG 0.553369 1:+86187991 MsG0180005050.01.T01:CDS
CAGACAAGCTGGCAGAGTGC+AGG 0.553853 1:+86187439 MsG0180005050.01.T01:CDS
GCAGAACCCGAGCCAACTGA+GGG 0.554178 1:+86187992 MsG0180005050.01.T01:CDS
CCATCACACAATCCCATAGT+GGG 0.554875 1:+86186555 MsG0180005050.01.T01:CDS
AGTTGGCAGTGGTAGCAAAA+GGG 0.556305 1:+86185767 MsG0180005050.01.T01:CDS
TATAAGTATGGAAACAATTG+AGG 0.556311 1:+86189788 MsG0180005050.01.T01:CDS
GGACTCAATTTCACCGGCGA+CGG 0.556718 1:-86185720 None:intergenic
GTGGTGATGGATTTGAAGGG+AGG 0.557298 1:+86185793 MsG0180005050.01.T01:CDS
ATATCACCTCAAGTTTCTAT+GGG 0.558486 1:+86187752 MsG0180005050.01.T01:CDS
ATTATTATGAAAGTGAAGAG+TGG 0.559206 1:+86187600 MsG0180005050.01.T01:CDS
GGGCAAGACCTGGGGAACCC+AGG 0.559724 1:-86189661 None:intergenic
TGTTTGTACTGCATCGTATG+TGG 0.560011 1:+86188124 MsG0180005050.01.T01:CDS
GGGTTAAGTATCATCAATTG+TGG 0.560220 1:-86190741 None:intergenic
TCTGGATGAGATGTAATGTC+TGG 0.560578 1:-86187062 None:intergenic
GTAAAATCCTTTGCGTAAGA+GGG 0.562512 1:-86186635 None:intergenic
CAGGACGGTTTGAGCATGAA+AGG 0.562755 1:+86186321 MsG0180005050.01.T01:CDS
TCTCATAATCAGCTCTCCCC+CGG 0.562920 1:-86190251 None:intergenic
GAGAGCATTTGCCTGTGGAT+AGG 0.563005 1:+86186441 MsG0180005050.01.T01:CDS
TTGAGTCCTCTGAAGGTGGA+TGG 0.565747 1:+86185735 MsG0180005050.01.T01:CDS
GGTGGTGTAAGTGTAACATC+AGG 0.567283 1:+86186158 MsG0180005050.01.T01:CDS
CCAAGTTGCGTACCCAGCAA+AGG 0.567307 1:+86185646 MsG0180005050.01.T01:CDS
AAATTGACGCCATATTTCAA+AGG 0.567831 1:-86190862 None:intergenic
TGGTGATGGATTTGAAGGGA+GGG 0.568476 1:+86185794 MsG0180005050.01.T01:CDS
GATTATGAGAGGATAAAATC+CGG 0.568891 1:+86190264 MsG0180005050.01.T01:CDS
GCCACCCATAGACACTAGTA+GGG 0.569584 1:+86186823 MsG0180005050.01.T01:CDS
TTTCATCTTATGATCAGCCT+AGG 0.571186 1:+86186750 MsG0180005050.01.T01:CDS
AATGAGTTGGAGAATGGAGA+AGG 0.571373 1:+86187710 MsG0180005050.01.T01:CDS
CTAACTCCATCCACCTTCAG+AGG 0.571656 1:-86185741 None:intergenic
TTCCTCAAGATACAGTAACC+TGG 0.571698 1:+86189643 MsG0180005050.01.T01:CDS
CATACATAAGCTAACTATGG+AGG 0.573930 1:-86190798 None:intergenic
AACTCCTCAGAGCCCTCAGT+TGG 0.574076 1:-86188004 None:intergenic
TCTCCCTGTTCCTCCACCGT+GGG 0.574178 1:-86186393 None:intergenic
TGTAATGGGTATCTTATCCA+CGG 0.575463 1:-86186279 None:intergenic
CAAAGAAGGTATCAGAAACA+AGG 0.576004 1:+86188091 MsG0180005050.01.T01:CDS
GAAAGAGTATTGTGAATCAG+AGG 0.576978 1:+86186081 MsG0180005050.01.T01:CDS
GAATGGTAGAACAAGTGGTA+GGG 0.577843 1:+86185833 MsG0180005050.01.T01:CDS
TGGTTATGTGGCAATTGCAG+AGG 0.579048 1:+86190350 MsG0180005050.01.T01:CDS
ATTCAATCAAAACAGGGTGA+TGG 0.581142 1:+86187212 MsG0180005050.01.T01:CDS
ATCTCCCTGTTCCTCCACCG+TGG 0.582616 1:-86186394 None:intergenic
AATCCCACGGTGAGGGAACA+GGG 0.583286 1:+86186477 MsG0180005050.01.T01:CDS
TCCTCAAGATACAGTAACCT+GGG 0.584295 1:+86189644 MsG0180005050.01.T01:CDS
GAATATGAATCTCGAAGAGA+TGG 0.584947 1:+86187350 MsG0180005050.01.T01:CDS
GAAAACTTGCAGAAGGTGCA+GGG 0.585064 1:+86186780 MsG0180005050.01.T01:CDS
ATATTATGGATGATAACAAC+TGG 0.585196 1:-86189729 None:intergenic
CATTTGAATGGTAGAACAAG+TGG 0.587209 1:+86185828 MsG0180005050.01.T01:CDS
GGATTATGGAAACTGCTCCA+TGG 0.590332 1:+86186676 MsG0180005050.01.T01:CDS
TAACCCATGAATACATGTGT+GGG 0.590532 1:+86190758 MsG0180005050.01.T01:three_prime_UTR
TGAAGCTTTGGCCCAAAAGG+AGG 0.590534 1:+86189689 MsG0180005050.01.T01:CDS
TTATTATGGAAATCCAAGAA+GGG 0.592058 1:+86187112 MsG0180005050.01.T01:CDS
TTAGAAACCTACAGACAAGC+TGG 0.592375 1:+86187428 MsG0180005050.01.T01:CDS
CTCGAAGAGATGGCGCTCCA+GGG 0.592518 1:+86187360 MsG0180005050.01.T01:CDS
TGGGCCAAAGCTTCAGCATG+GGG 0.593414 1:-86189681 None:intergenic
TTCCTCATTTGATCAACAGG+AGG 0.593694 1:-86185870 None:intergenic
TCTAAATCATGCTTAGACAG+AGG 0.593939 1:-86187410 None:intergenic
CGAGCCAACTGAGGGCTCTG+AGG 0.594117 1:+86188000 MsG0180005050.01.T01:CDS
TCAGCATGGGGCAAGACCTG+GGG 0.594459 1:-86189669 None:intergenic
TAAGTATCATCAATTGTGGA+TGG 0.595616 1:-86190737 None:intergenic
TCAGGATATGACGAAGAAGA+TGG 0.595618 1:+86186176 MsG0180005050.01.T01:CDS
GCCATATTTCAAAGGAGAGA+AGG 0.598307 1:-86190854 None:intergenic
GAAATCAAGTAAATGGGGTG+CGG 0.598537 1:+86187562 MsG0180005050.01.T01:CDS
GTTGGCAGTGGTAGCAAAAG+GGG 0.598710 1:+86185768 MsG0180005050.01.T01:CDS
TTTATGGTACAGTTCCTCAA+AGG 0.600720 1:+86189500 MsG0180005050.01.T01:intron
ATCACAGAATCCCACGGTGA+GGG 0.601138 1:+86186470 MsG0180005050.01.T01:CDS
CATTACAGAATCCCATGGTG+GGG 0.601469 1:+86186295 MsG0180005050.01.T01:CDS
TGACGAATCATATGAAGATG+TGG 0.602097 1:+86187961 MsG0180005050.01.T01:CDS
TTCATATCTGGATGCACCAG+AGG 0.604012 1:+86187298 MsG0180005050.01.T01:CDS
ATTACAGAATCCCACGGTGG+AGG 0.604178 1:+86186383 MsG0180005050.01.T01:CDS
TGTGAATTATATGACCGCTC+AGG 0.606146 1:+86190638 MsG0180005050.01.T01:three_prime_UTR
TATCCACAGGAAAATGCTCT+CGG 0.606157 1:-86186526 None:intergenic
GTCAGCACCACCATAATCCA+TGG 0.606495 1:-86185979 None:intergenic
GGTGCAGGGTTTAGTGGACA+TGG 0.608373 1:+86186794 MsG0180005050.01.T01:CDS
TGGGATGAGAGCTAAACACT+TGG 0.608681 1:+86189575 MsG0180005050.01.T01:CDS
GTAATGGGTATCTTATCCAC+GGG 0.610013 1:-86186278 None:intergenic
ATTATCTCCCTCTTACGCAA+AGG 0.611093 1:+86186628 MsG0180005050.01.T01:CDS
GGATATGACGAAGAAGATGG+TGG 0.615288 1:+86186179 MsG0180005050.01.T01:CDS
TGACAATCCTCAAAACTGGA+AGG 0.615565 1:+86189764 MsG0180005050.01.T01:CDS
GGTGAAATTGAGTCCTCTGA+AGG 0.615870 1:+86185728 MsG0180005050.01.T01:CDS
GGTGATATCCTCTTATCAGA+AGG 0.618738 1:-86187737 None:intergenic
ACCCAGGTTACTGTATCTTG+AGG 0.620230 1:-86189645 None:intergenic
GGTTTAGTGGACATGGCCAA+AGG 0.621304 1:+86186801 MsG0180005050.01.T01:CDS
TGCGTAAGAGGGAGATAATG+TGG 0.622096 1:-86186624 None:intergenic
TTATGATCACCGCCTCTCGT+CGG 0.623176 1:-86190463 None:intergenic
GGGGTCCTGAAATTGGGCAG+AGG 0.625540 1:+86186843 MsG0180005050.01.T01:CDS
TATGATCAGCCTAGGAGCAG+CGG 0.626439 1:+86186758 MsG0180005050.01.T01:CDS
ATACATAAGCTAACTATGGA+GGG 0.626593 1:-86190797 None:intergenic
AACATTGAAGAGACAGATCA+GGG 0.627235 1:+86190303 MsG0180005050.01.T01:CDS
TATCCCTGTTCCCTCACCGT+GGG 0.628171 1:-86186480 None:intergenic
CAGGAAATGAGTCAGCATGT+TGG 0.631275 1:+86187458 MsG0180005050.01.T01:CDS
AATCCCACGGTGGAGGAACA+GGG 0.632337 1:+86186390 MsG0180005050.01.T01:CDS
GAAATTGAGTCCTCTGAAGG+TGG 0.633656 1:+86185731 MsG0180005050.01.T01:CDS
ATGTTGGATCCTGCGATGCA+GGG 0.635002 1:-86187157 None:intergenic
TATCTTTCTGATAGCAACCG+GGG 0.635487 1:+86190234 MsG0180005050.01.T01:CDS
AAAATGAAATCAAGTAAATG+GGG 0.637217 1:+86187557 MsG0180005050.01.T01:CDS
ATGAGAGGATAAAATCCGGA+GGG 0.639458 1:+86190268 MsG0180005050.01.T01:CDS
TATTATGGAAATCCAAGAAG+GGG 0.639511 1:+86187113 MsG0180005050.01.T01:CDS
ATATCTTTCTGATAGCAACC+GGG 0.641160 1:+86190233 MsG0180005050.01.T01:CDS
AAAGCAATATGTGTTATGAT+GGG 0.641357 1:+86189606 MsG0180005050.01.T01:CDS
AGCAGCGGAAAACTTGCAGA+AGG 0.643382 1:+86186773 MsG0180005050.01.T01:CDS
GCTGGCACACTCCTTGACGG+TGG 0.643586 1:-86186212 None:intergenic
TTAACCCATGAATACATGTG+TGG 0.646179 1:+86190757 MsG0180005050.01.T01:three_prime_UTR
AGGTCTATTCCGGATACTGG+TGG 0.647001 1:+86186140 MsG0180005050.01.T01:CDS
GATATGACGAAGAAGATGGT+GGG 0.647947 1:+86186180 MsG0180005050.01.T01:CDS
CCCATTACAGAATCCCATGG+TGG 0.650779 1:+86186293 MsG0180005050.01.T01:CDS
ATTACAGAATCCCATGGTGG+GGG 0.654532 1:+86186296 MsG0180005050.01.T01:CDS
GGGATGAGAGCTAAACACTT+GGG 0.662215 1:+86189576 MsG0180005050.01.T01:CDS
CCCCTACTAGTGTCTATGGG+TGG 0.663448 1:-86186824 None:intergenic
TCACCGAGAAAATTTGCATG+TGG 0.663801 1:+86186349 MsG0180005050.01.T01:CDS
GGCAGTGGTAGCAAAAGGGG+TGG 0.668013 1:+86185771 MsG0180005050.01.T01:CDS
ACATGTCCCATAGAAACTTG+AGG 0.670238 1:-86187758 None:intergenic
GTGGTGGTGATGGATTTGAA+GGG 0.674346 1:+86185790 MsG0180005050.01.T01:CDS
TCACCGAGAGCATTTGCCCG+TGG 0.675218 1:+86186262 MsG0180005050.01.T01:CDS
GAAACTGCTCCATGGAAACG+AGG 0.675690 1:+86186684 MsG0180005050.01.T01:CDS
ATACCCATTACAGAATCCCA+TGG 0.676173 1:+86186290 MsG0180005050.01.T01:CDS
TTATGGATGATAACAACTGG+TGG 0.677758 1:-86189726 None:intergenic
TTGGGCTGGGAGATGCAGAG+AGG 0.681547 1:+86190202 MsG0180005050.01.T01:CDS
ACACCGAGAGCATTTGCCTG+TGG 0.682250 1:+86186436 MsG0180005050.01.T01:CDS
CATCACAGAATCCCACGGTG+AGG 0.687385 1:+86186469 MsG0180005050.01.T01:CDS
TGAGAGGATAAAATCCGGAG+GGG 0.688517 1:+86190269 MsG0180005050.01.T01:CDS
ATCCTGTTAAAACCGACGAG+AGG 0.694906 1:+86190451 MsG0180005050.01.T01:CDS
ATCTTTCTGATAGCAACCGG+GGG 0.698939 1:+86190235 MsG0180005050.01.T01:CDS
AAACCCATCACAGAATCCCA+CGG 0.699496 1:+86186464 MsG0180005050.01.T01:CDS
TATGAGAGGATAAAATCCGG+AGG 0.699994 1:+86190267 MsG0180005050.01.T01:CDS
ACATCAATTCAATCAAAACA+GGG 0.700461 1:+86187206 MsG0180005050.01.T01:CDS
CATCACACAATCCCATAGTG+GGG 0.710730 1:+86186556 MsG0180005050.01.T01:CDS
GGATGATTAGACAGTCACCA+AGG 0.710980 1:+86190714 MsG0180005050.01.T01:three_prime_UTR
ATATCCCTGTTCCCTCACCG+TGG 0.712877 1:-86186481 None:intergenic
GAGTACGGTAAAGAGCAGGA+AGG 0.713116 1:+86190407 MsG0180005050.01.T01:CDS
ATACCCATTACAGAATCCCA+CGG 0.715467 1:+86186377 MsG0180005050.01.T01:CDS
AATATGTGTTATGATGGGAT+GGG 0.718366 1:+86189611 MsG0180005050.01.T01:CDS
TTGGATACATTCATCCTGAG+CGG 0.723029 1:-86190652 None:intergenic
ACTGCTCCATGGAAACGAGG+AGG 0.723109 1:+86186687 MsG0180005050.01.T01:CDS
TTGGATCCTGCGATGCAGGG+TGG 0.739391 1:-86187154 None:intergenic
CCACCCATAGACACTAGTAG+GGG 0.755539 1:+86186824 MsG0180005050.01.T01:CDS
ACGGATCCAACCCATCACGA+CGG 0.757815 1:-86185701 None:intergenic
CCCATTACAGAATCCCACGG+TGG 0.779374 1:+86186380 MsG0180005050.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTATAATGAAAATAG+TGG + Chr1:86189330-86189349 MsG0180005050.01.T01:intron 10.0%
!! AAAAATGAAATCAAGTAAAT+GGG + Chr1:86187556-86187575 MsG0180005050.01.T01:CDS 15.0%
!! TATGATGAAAAAAATTGATT+CGG - Chr1:86188958-86188977 None:intergenic 15.0%
!! TTTGAATAATTATTATTGCA+CGG - Chr1:86189853-86189872 None:intergenic 15.0%
!!! AAAAACGAAAATTTTGTAAA+AGG - Chr1:86185508-86185527 None:intergenic 15.0%
!!! AAAACGAAAATTTTGTAAAA+GGG - Chr1:86185507-86185526 None:intergenic 15.0%
!!! AAACTCAATATGATTTTTAA+TGG + Chr1:86189870-86189889 MsG0180005050.01.T01:intron 15.0%
!!! AAATAACATTTTAAGAACAT+TGG - Chr1:86190674-86190693 None:intergenic 15.0%
!!! ATATTTTTTTTTTCCTTTAG+AGG + Chr1:86188975-86188994 MsG0180005050.01.T01:intron 15.0%
!!! GTTATTTCATTTAAATACAA+GGG + Chr1:86190687-86190706 MsG0180005050.01.T01:three_prime_UTR 15.0%
!!! TAAAATGATAGATAATTTTG+AGG + Chr1:86189148-86189167 MsG0180005050.01.T01:intron 15.0%
!!! TATTTTTTTTTTCCTTTAGA+GGG + Chr1:86188976-86188995 MsG0180005050.01.T01:intron 15.0%
!!! TGTTATTTCATTTAAATACA+AGG + Chr1:86190686-86190705 MsG0180005050.01.T01:three_prime_UTR 15.0%
!! AAAATGAAATCAAGTAAATG+GGG + Chr1:86187557-86187576 MsG0180005050.01.T01:CDS 20.0%
!! AAAGTTTGTGACTATTTATT+TGG + Chr1:86188580-86188599 MsG0180005050.01.T01:intron 20.0%
!! AAGTTTGTGACTATTTATTT+GGG + Chr1:86188581-86188600 MsG0180005050.01.T01:intron 20.0%
!! ATTACATACTTATTGAGTAA+AGG + Chr1:86189987-86190006 MsG0180005050.01.T01:intron 20.0%
!! ATTCCTAAATTCAACTAAAA+GGG + Chr1:86185537-86185556 MsG0180005050.01.T01:intron 20.0%
!! GAAAAATGAAATCAAGTAAA+TGG + Chr1:86187555-86187574 MsG0180005050.01.T01:CDS 20.0%
!! TAAGAATAAATACAATGAGT+TGG + Chr1:86187697-86187716 MsG0180005050.01.T01:CDS 20.0%
!! TATGAAACTTCATAATCATT+TGG - Chr1:86187284-86187303 None:intergenic 20.0%
!! TATTCCTAAATTCAACTAAA+AGG + Chr1:86185536-86185555 MsG0180005050.01.T01:intron 20.0%
!! TTACATACTTATTGAGTAAA+GGG + Chr1:86189988-86190007 MsG0180005050.01.T01:intron 20.0%
!! TTACATGTAGTATTATTCTT+AGG + Chr1:86188253-86188272 MsG0180005050.01.T01:intron 20.0%
!! TTATAACTTCTTAGACAATT+AGG + Chr1:86188725-86188744 MsG0180005050.01.T01:intron 20.0%
!!! AAGTATGTAATGTTTTCATA+AGG - Chr1:86189978-86189997 None:intergenic 20.0%
!!! AATGATACTATTGAAGTTTT+AGG + Chr1:86190903-86190922 MsG0180005050.01.T01:three_prime_UTR 20.0%
!!! ATGATGTCTTATATTTTGAT+TGG - Chr1:86187816-86187835 None:intergenic 20.0%
!!! CAATTTAATTTGTGATGTAT+TGG + Chr1:86190879-86190898 MsG0180005050.01.T01:three_prime_UTR 20.0%
!!! TATAATGCTCTTTTATCAAA+TGG + Chr1:86188168-86188187 MsG0180005050.01.T01:intron 20.0%
!!! TCTTTTTTTATGAAGATCAT+AGG - Chr1:86188657-86188676 None:intergenic 20.0%
! AAAGCAATATGTGTTATGAT+GGG + Chr1:86189606-86189625 MsG0180005050.01.T01:CDS 25.0%
! AACATCAATTCAATCAAAAC+AGG + Chr1:86187205-86187224 MsG0180005050.01.T01:CDS 25.0%
! AACCGTTTCAAAAATTTCAT+GGG + Chr1:86190484-86190503 MsG0180005050.01.T01:three_prime_UTR 25.0%
! AATTAGGATTAATCTGAATC+TGG + Chr1:86188874-86188893 MsG0180005050.01.T01:intron 25.0%
! ACATAGAACTAAGAAATACT+TGG - Chr1:86189897-86189916 None:intergenic 25.0%
! ACATCAATTCAATCAAAACA+GGG + Chr1:86187206-86187225 MsG0180005050.01.T01:CDS 25.0%
! ACTATTTATTTGGGAAGAAA+AGG + Chr1:86188590-86188609 MsG0180005050.01.T01:intron 25.0%
! AGTAGCTAAGAATTAAGATT+AGG - Chr1:86189027-86189046 None:intergenic 25.0%
! ATAGTTGTTGTACTTCATTA+AGG + Chr1:86188298-86188317 MsG0180005050.01.T01:intron 25.0%
! ATATTATGGATGATAACAAC+TGG - Chr1:86189732-86189751 None:intergenic 25.0%
! ATTATTATGAAAGTGAAGAG+TGG + Chr1:86187600-86187619 MsG0180005050.01.T01:CDS 25.0%
! ATTATTATGGAAATCCAAGA+AGG + Chr1:86187111-86187130 MsG0180005050.01.T01:CDS 25.0%
! CACCTGTAAGTTAAATAATA+GGG - Chr1:86188226-86188245 None:intergenic 25.0%
! CATAGTAGCAAACTTATAAT+TGG - Chr1:86188452-86188471 None:intergenic 25.0%
! CATCAGACATTGAAATATTA+TGG - Chr1:86189746-86189765 None:intergenic 25.0%
! CATTTATTATACAAACTGCA+CGG + Chr1:86189939-86189958 MsG0180005050.01.T01:intron 25.0%
! CTTATGTATGAACATCTATT+TGG + Chr1:86190811-86190830 MsG0180005050.01.T01:three_prime_UTR 25.0%
! GCGTATTCATATAAAAATGT+TGG + Chr1:86187647-86187666 MsG0180005050.01.T01:CDS 25.0%
! GCTGTATATGTATAACAATT+AGG + Chr1:86188858-86188877 MsG0180005050.01.T01:intron 25.0%
! GTAGCTAAGAATTAAGATTA+GGG - Chr1:86189026-86189045 None:intergenic 25.0%
! GTGCAGTTTGTATAATAAAT+GGG - Chr1:86189940-86189959 None:intergenic 25.0%
! TAAATAGTCACAAACTTTGA+AGG - Chr1:86188578-86188597 None:intergenic 25.0%
! TAACCGTTTCAAAAATTTCA+TGG + Chr1:86190483-86190502 MsG0180005050.01.T01:three_prime_UTR 25.0%
! TACATACTTATTGAGTAAAG+GGG + Chr1:86189989-86190008 MsG0180005050.01.T01:intron 25.0%
! TACCATAAAGGAAAATAAAC+AGG - Chr1:86189489-86189508 None:intergenic 25.0%
! TACCATATGTTTGATCTTAT+TGG - Chr1:86188360-86188379 None:intergenic 25.0%
! TAGATTTCAATAGCAAGAAT+TGG + Chr1:86190385-86190404 MsG0180005050.01.T01:CDS 25.0%
! TAGTTGTTGTACTTCATTAA+GGG + Chr1:86188299-86188318 MsG0180005050.01.T01:intron 25.0%
! TATAAGTATGGAAACAATTG+AGG + Chr1:86189788-86189807 MsG0180005050.01.T01:CDS 25.0%
! TCATTTAAATACAAGGGTTA+AGG + Chr1:86190693-86190712 MsG0180005050.01.T01:three_prime_UTR 25.0%
! TGATTATGAAGTTTCATATC+TGG + Chr1:86187286-86187305 MsG0180005050.01.T01:CDS 25.0%
! TGCAGTTTGTATAATAAATG+GGG - Chr1:86189939-86189958 None:intergenic 25.0%
! TGTAGATTGAATTTCCTATT+AGG + Chr1:86188759-86188778 MsG0180005050.01.T01:intron 25.0%
! TTATTATGAAAGTGAAGAGT+GGG + Chr1:86187601-86187620 MsG0180005050.01.T01:CDS 25.0%
! TTATTATGGAAATCCAAGAA+GGG + Chr1:86187112-86187131 MsG0180005050.01.T01:CDS 25.0%
! TTCTATAAACATATTGCATC+AGG + Chr1:86188196-86188215 MsG0180005050.01.T01:intron 25.0%
!! AATGTTTTATGCAAGAGATA+GGG + Chr1:86186589-86186608 MsG0180005050.01.T01:CDS 25.0%
!! ATTTTTCATAAGGCAACAAT+TGG - Chr1:86190054-86190073 None:intergenic 25.0%
!! GAATCTGGAATTGTTAATAT+AGG + Chr1:86188889-86188908 MsG0180005050.01.T01:intron 25.0%
!! TATTCAAAAACCATGGATTA+TGG + Chr1:86185969-86185988 MsG0180005050.01.T01:CDS 25.0%
!! TTCCACTAAAAATCTAAAAC+CGG - Chr1:86188805-86188824 None:intergenic 25.0%
!!! AAAAGGTCACTTTTTAATGA+CGG + Chr1:86185891-86185910 MsG0180005050.01.T01:CDS 25.0%
!!! AACACTCAAATTTTAGAACT+AGG - Chr1:86190511-86190530 None:intergenic 25.0%
!!! ATACCCTTTTAGTTGAATTT+AGG - Chr1:86185543-86185562 None:intergenic 25.0%
!!! ATTCAACTAAAAGGGTATTT+AGG + Chr1:86185545-86185564 MsG0180005050.01.T01:intron 25.0%
!!! TAAGTAATTATTTTAGCCTC+TGG + Chr1:86188549-86188568 MsG0180005050.01.T01:intron 25.0%
!!! TTCAACTAAAAGGGTATTTA+GGG + Chr1:86185546-86185565 MsG0180005050.01.T01:intron 25.0%
!!! TTTGGAATGAATTCCTTTTT+AGG + Chr1:86190829-86190848 MsG0180005050.01.T01:three_prime_UTR 25.0%
!!! TTTTAGATTTTTAGTGGAAC+CGG + Chr1:86188806-86188825 MsG0180005050.01.T01:intron 25.0%
AAAAGGAGGATTTGATTCTT+TGG + Chr1:86189703-86189722 MsG0180005050.01.T01:CDS 30.0%
AAACTGGAAGGTTATAAGTA+TGG + Chr1:86189776-86189795 MsG0180005050.01.T01:CDS 30.0%
AAATTGACGCCATATTTCAA+AGG - Chr1:86190865-86190884 None:intergenic 30.0%
AACAATTGGTGAGTAAAGAA+TGG - Chr1:86190040-86190059 None:intergenic 30.0%
AAGTTCATATAGGTCTATTC+CGG + Chr1:86186130-86186149 MsG0180005050.01.T01:CDS 30.0%
AATATCTTTCTGATAGCAAC+CGG + Chr1:86190232-86190251 MsG0180005050.01.T01:CDS 30.0%
ACAATTGGTGAGTAAAGAAT+GGG - Chr1:86190039-86190058 None:intergenic 30.0%
ACATACTTATTGAGTAAAGG+GGG + Chr1:86189990-86190009 MsG0180005050.01.T01:intron 30.0%
AGAACTGCTAACTTAAGTAT+AGG - Chr1:86190556-86190575 None:intergenic 30.0%
AGATGATGAAGACATGAATA+TGG + Chr1:86187625-86187644 MsG0180005050.01.T01:CDS 30.0%
AGTATGATGATATACCTAGA+AGG + Chr1:86186975-86186994 MsG0180005050.01.T01:intron 30.0%
AGTTGTTGTACTTCATTAAG+GGG + Chr1:86188300-86188319 MsG0180005050.01.T01:intron 30.0%
ATACATAAGCTAACTATGGA+GGG - Chr1:86190800-86190819 None:intergenic 30.0%
ATATCACCTCAAGTTTCTAT+GGG + Chr1:86187752-86187771 MsG0180005050.01.T01:CDS 30.0%
ATATGGGTATTCAAAAACCA+TGG + Chr1:86185962-86185981 MsG0180005050.01.T01:CDS 30.0%
ATCAAAAACAACCTAAAGGT+TGG + Chr1:86187894-86187913 MsG0180005050.01.T01:CDS 30.0%
ATGAAACGTGTTTATCTTGA+TGG + Chr1:86186023-86186042 MsG0180005050.01.T01:CDS 30.0%
ATGAAGTTGGAAGTTCATAT+AGG + Chr1:86186120-86186139 MsG0180005050.01.T01:CDS 30.0%
ATGTTTGATCTTATTGGCAT+GGG - Chr1:86188354-86188373 None:intergenic 30.0%
CAAAGCAATATGTGTTATGA+TGG + Chr1:86189605-86189624 MsG0180005050.01.T01:CDS 30.0%
CAGAAAAAGAACTCATACAA+AGG - Chr1:86190616-86190635 None:intergenic 30.0%
CCACCTGTAAGTTAAATAAT+AGG - Chr1:86188227-86188246 None:intergenic 30.0%
CGTGCAGTTTGTATAATAAA+TGG - Chr1:86189941-86189960 None:intergenic 30.0%
CTTAATTCTTAGCTACTCTA+TGG + Chr1:86189030-86189049 MsG0180005050.01.T01:intron 30.0%
GACAGAAGTTTATGATGTAT+AGG + Chr1:86189395-86189414 MsG0180005050.01.T01:intron 30.0%
GACGAATCAAATTATGCTTA+GGG + Chr1:86190130-86190149 MsG0180005050.01.T01:CDS 30.0%
GATTATGAGAGGATAAAATC+CGG + Chr1:86190264-86190283 MsG0180005050.01.T01:CDS 30.0%
GATTTGATTGAAAGCAGATT+AGG + Chr1:86186053-86186072 MsG0180005050.01.T01:CDS 30.0%
GCAAATCAAAAACAACCTAA+AGG + Chr1:86187890-86187909 MsG0180005050.01.T01:CDS 30.0%
GGTAAGAGTGAAGATTATTA+TGG + Chr1:86187098-86187117 MsG0180005050.01.T01:CDS 30.0%
GTATGATGATATACCTAGAA+GGG + Chr1:86186976-86186995 MsG0180005050.01.T01:intron 30.0%
GTTCATACATAAGCTAACTA+TGG - Chr1:86190804-86190823 None:intergenic 30.0%
TAAGTATCATCAATTGTGGA+TGG - Chr1:86190740-86190759 None:intergenic 30.0%
TATAAACATATTGCATCAGG+AGG + Chr1:86188199-86188218 MsG0180005050.01.T01:intron 30.0%
TATGTTTGATCTTATTGGCA+TGG - Chr1:86188355-86188374 None:intergenic 30.0%
TATTATGGAAATCCAAGAAG+GGG + Chr1:86187113-86187132 MsG0180005050.01.T01:CDS 30.0%
TCATGATAGTCTACATATGT+TGG - Chr1:86187176-86187195 None:intergenic 30.0%
TCTTAGACAATTAGGATTGT+TGG + Chr1:86188733-86188752 MsG0180005050.01.T01:intron 30.0%
TGAATTTCCTATTAGGAGTA+TGG + Chr1:86188766-86188785 MsG0180005050.01.T01:intron 30.0%
TGCCAATAAGATCAAACATA+TGG + Chr1:86188355-86188374 MsG0180005050.01.T01:intron 30.0%
TGCTGCTGATAAATAAAAGT+TGG - Chr1:86189267-86189286 None:intergenic 30.0%
TGTTTATCTTGATGGAGATA+AGG + Chr1:86186031-86186050 MsG0180005050.01.T01:CDS 30.0%
TTACCAGTTCTATCTAAATC+TGG - Chr1:86187083-86187102 None:intergenic 30.0%
TTCTAGGTATATCATCATAC+TGG - Chr1:86186976-86186995 None:intergenic 30.0%
TTGAGAAGTGAAAATGAAGT+TGG + Chr1:86186107-86186126 MsG0180005050.01.T01:CDS 30.0%
! AAAGAATCAAATCCTCCTTT+TGG - Chr1:86189704-86189723 None:intergenic 30.0%
! AAAGTGGAGAGTTTTCTTTA+TGG + Chr1:86190330-86190349 MsG0180005050.01.T01:CDS 30.0%
! AAATACAATGAGTTGGAGAA+TGG + Chr1:86187704-86187723 MsG0180005050.01.T01:CDS 30.0%
! AAGAATCAAATCCTCCTTTT+GGG - Chr1:86189703-86189722 None:intergenic 30.0%
! AATATGTGTTATGATGGGAT+GGG + Chr1:86189611-86189630 MsG0180005050.01.T01:CDS 30.0%
! ACGAACATCTATTTCTTCAT+TGG - Chr1:86187528-86187547 None:intergenic 30.0%
! ATAAACCTCAGCATTTTTCT+AGG + Chr1:86187861-86187880 MsG0180005050.01.T01:CDS 30.0%
! CAATGTTTTATGCAAGAGAT+AGG + Chr1:86186588-86186607 MsG0180005050.01.T01:CDS 30.0%
! CCTATTATTTAACTTACAGG+TGG + Chr1:86188224-86188243 MsG0180005050.01.T01:intron 30.0%
! GAGTTTTCTTTATGGTTATG+TGG + Chr1:86190338-86190357 MsG0180005050.01.T01:CDS 30.0%
! GCAAATGTGCATTTTTCATA+AGG - Chr1:86190064-86190083 None:intergenic 30.0%
! GTCCCTATTATTTAACTTAC+AGG + Chr1:86188221-86188240 MsG0180005050.01.T01:intron 30.0%
! GTTTTTGAATACCCATATCT+AGG - Chr1:86185960-86185979 None:intergenic 30.0%
! TATCCACATGCAAATTTTCT+CGG - Chr1:86186355-86186374 None:intergenic 30.0%
! TATCTTAATCCCCTTTTCTA+TGG + Chr1:86185452-86185471 MsG0180005050.01.T01:intron 30.0%
! TCTATAGTTTTTCTCTCTGT+TGG + Chr1:86189214-86189233 MsG0180005050.01.T01:intron 30.0%
! TGTAATGGAGTATGATAACA+GGG + Chr1:86187033-86187052 MsG0180005050.01.T01:intron 30.0%
! TTTTCACAAGTCTATCTGAA+TGG - Chr1:86187493-86187512 None:intergenic 30.0%
!! GACCCATGAAATTTTTGAAA+CGG - Chr1:86190489-86190508 None:intergenic 30.0%
!! GTCCTGTTTATTTTCCTTTA+TGG + Chr1:86189484-86189503 MsG0180005050.01.T01:intron 30.0%
!! TACTTCTGAAATCGAAATGA+TGG - Chr1:86187791-86187810 None:intergenic 30.0%
!! TATCTAAGTAATTAGCCTTC+TGG - Chr1:86189103-86189122 None:intergenic 30.0%
!! TTATTTCTTTTCATGCTTGC+AGG + Chr1:86190090-86190109 MsG0180005050.01.T01:intron 30.0%
!! TTTTCCTTTAGAGGGAATTA+TGG + Chr1:86188984-86189003 MsG0180005050.01.T01:intron 30.0%
!!! AAAGGTCACTTTTTAATGAC+GGG + Chr1:86185892-86185911 MsG0180005050.01.T01:CDS 30.0%
!!! TGATACTTTTTCCAACCTTT+AGG - Chr1:86187908-86187927 None:intergenic 30.0%
!!! TTCCGGTTTTAGATTTTTAG+TGG + Chr1:86188800-86188819 MsG0180005050.01.T01:intron 30.0%
!!! TTTAGATTTTTAGTGGAACC+GGG + Chr1:86188807-86188826 MsG0180005050.01.T01:intron 30.0%
AAACCCTAACCATAGAAAAG+GGG - Chr1:86185464-86185483 None:intergenic 35.0%
AAATTGGGCAGAGGAATATT+AGG + Chr1:86186852-86186871 MsG0180005050.01.T01:CDS 35.0%
AACATTGAAGAGACAGATCA+GGG + Chr1:86190303-86190322 MsG0180005050.01.T01:CDS 35.0%
AAGATTGCTTTAACATGCCA+TGG + Chr1:86188673-86188692 MsG0180005050.01.T01:intron 35.0%
AAGGACTTAACTCACATTGA+TGG - Chr1:86186883-86186902 None:intergenic 35.0%
AATGAGAAGAGAATACAGCT+AGG + Chr1:86188702-86188721 MsG0180005050.01.T01:intron 35.0%
ACATATGGTAAATTGCTCTG+TGG + Chr1:86188370-86188389 MsG0180005050.01.T01:intron 35.0%
ACTATTCTGGTGAAGTTCTT+GGG + Chr1:86190171-86190190 MsG0180005050.01.T01:CDS 35.0%
ACTTCACCAGAATAGTACTT+TGG - Chr1:86190167-86190186 None:intergenic 35.0%
ACTTCATTAAGGGGAATTCA+TGG + Chr1:86188309-86188328 MsG0180005050.01.T01:intron 35.0%
AGAATTAAGATTAGGGACTC+TGG - Chr1:86189019-86189038 None:intergenic 35.0%
AGTTAGCAGTTCTTGTATAC+AGG + Chr1:86190563-86190582 MsG0180005050.01.T01:three_prime_UTR 35.0%
ATAGGCCATAAAAACCTTTC+AGG - Chr1:86188639-86188658 None:intergenic 35.0%
ATATCTTTCTGATAGCAACC+GGG + Chr1:86190233-86190252 MsG0180005050.01.T01:CDS 35.0%
ATTCAATCAAAACAGGGTGA+TGG + Chr1:86187212-86187231 MsG0180005050.01.T01:CDS 35.0%
CAATAGCAAGAATTGGAGTA+CGG + Chr1:86190392-86190411 MsG0180005050.01.T01:CDS 35.0%
CAATTGGTGAGTAAAGAATG+GGG - Chr1:86190038-86190057 None:intergenic 35.0%
CACTTGCAAAGTTTCTTCTT+TGG + Chr1:86189285-86189304 MsG0180005050.01.T01:intron 35.0%
CATACATAAGCTAACTATGG+AGG - Chr1:86190801-86190820 None:intergenic 35.0%
CATCCAGATTTAGATAGAAC+TGG + Chr1:86187077-86187096 MsG0180005050.01.T01:CDS 35.0%
CATTTGAATGGTAGAACAAG+TGG + Chr1:86185828-86185847 MsG0180005050.01.T01:CDS 35.0%
CTGTTGATCAAATGAGGAAA+AGG + Chr1:86185874-86185893 MsG0180005050.01.T01:CDS 35.0%
CTTACAACCATACTCCTAAT+AGG - Chr1:86188776-86188795 None:intergenic 35.0%
GAAACCCTAACCATAGAAAA+GGG - Chr1:86185465-86185484 None:intergenic 35.0%
GAACACTGCTAGGATAAATT+GGG + Chr1:86188612-86188631 MsG0180005050.01.T01:intron 35.0%
GAATATGAATCTCGAAGAGA+TGG + Chr1:86187350-86187369 MsG0180005050.01.T01:CDS 35.0%
GATATCACCTCAAGTTTCTA+TGG + Chr1:86187751-86187770 MsG0180005050.01.T01:CDS 35.0%
GATCCAACCATAAGATATAC+AGG + Chr1:86187669-86187688 MsG0180005050.01.T01:CDS 35.0%
GATTCTGATTGGCATTTGAA+TGG + Chr1:86185816-86185835 MsG0180005050.01.T01:CDS 35.0%
GGACGAATCAAATTATGCTT+AGG + Chr1:86190129-86190148 MsG0180005050.01.T01:CDS 35.0%
GGGTTAAGTATCATCAATTG+TGG - Chr1:86190744-86190763 None:intergenic 35.0%
GTAAAATCCTTTGCGTAAGA+GGG - Chr1:86186638-86186657 None:intergenic 35.0%
GTATGGTTGTAAGTAACTTC+CGG + Chr1:86188783-86188802 MsG0180005050.01.T01:intron 35.0%
TAACATTGAAGAGACAGATC+AGG + Chr1:86190302-86190321 MsG0180005050.01.T01:CDS 35.0%
TAACCCATGAATACATGTGT+GGG + Chr1:86190758-86190777 MsG0180005050.01.T01:three_prime_UTR 35.0%
TAACTATGGAGGGAACAAAT+TGG - Chr1:86190790-86190809 None:intergenic 35.0%
TACTATTCTGGTGAAGTTCT+TGG + Chr1:86190170-86190189 MsG0180005050.01.T01:CDS 35.0%
TATCAGAAACAAGGAAAAGC+TGG + Chr1:86188100-86188119 MsG0180005050.01.T01:CDS 35.0%
TATGCTGCCTGTATATCTTA+TGG - Chr1:86187679-86187698 None:intergenic 35.0%
TATTGCTTTAACGAACCAGA+AGG + Chr1:86189085-86189104 MsG0180005050.01.T01:intron 35.0%
TCTAAATCATGCTTAGACAG+AGG - Chr1:86187413-86187432 None:intergenic 35.0%
TGAAACCCTAACCATAGAAA+AGG - Chr1:86185466-86185485 None:intergenic 35.0%
TGACGAATCATATGAAGATG+TGG + Chr1:86187961-86187980 MsG0180005050.01.T01:CDS 35.0%
TGTAAAATCCTTTGCGTAAG+AGG - Chr1:86186639-86186658 None:intergenic 35.0%
TTAACCCATGAATACATGTG+TGG + Chr1:86190757-86190776 MsG0180005050.01.T01:three_prime_UTR 35.0%
TTAGGGTTTCAAGATCACTA+GGG + Chr1:86185475-86185494 MsG0180005050.01.T01:intron 35.0%
TTATGGATGATAACAACTGG+TGG - Chr1:86189729-86189748 None:intergenic 35.0%
TTGATTGAAAGCAGATTAGG+TGG + Chr1:86186056-86186075 MsG0180005050.01.T01:CDS 35.0%
TTTATGGTACAGTTCCTCAA+AGG + Chr1:86189500-86189519 MsG0180005050.01.T01:intron 35.0%
TTTCATCTTATGATCAGCCT+AGG + Chr1:86186750-86186769 MsG0180005050.01.T01:CDS 35.0%
TTTCCCACACATGTATTCAT+GGG - Chr1:86190764-86190783 None:intergenic 35.0%
TTTGAGGAACTGTACCATAA+AGG - Chr1:86189501-86189520 None:intergenic 35.0%
! AAGGTTTTCCTTCTGATAAG+AGG + Chr1:86187729-86187748 MsG0180005050.01.T01:CDS 35.0%
! AATCCCCTTTTCTATGGTTA+GGG + Chr1:86185458-86185477 MsG0180005050.01.T01:intron 35.0%
! ACAATTGAGGCGTTTATAAG+AGG + Chr1:86189801-86189820 MsG0180005050.01.T01:CDS 35.0%
! CAAAGTCTAGTTCATCAAAC+TGG + Chr1:86187837-86187856 MsG0180005050.01.T01:CDS 35.0%
! CAATATGTGTTATGATGGGA+TGG + Chr1:86189610-86189629 MsG0180005050.01.T01:CDS 35.0%
! CTGTAATGGAGTATGATAAC+AGG + Chr1:86187032-86187051 MsG0180005050.01.T01:intron 35.0%
! CTTATAACCTTCCAGTTTTG+AGG - Chr1:86189774-86189793 None:intergenic 35.0%
! CTTTAGAGGGAATTATGGTT+GGG + Chr1:86188989-86189008 MsG0180005050.01.T01:intron 35.0%
! CTTTTCCTCATTTGATCAAC+AGG - Chr1:86185876-86185895 None:intergenic 35.0%
! GATATTTGATGATATGCCTC+TGG - Chr1:86187317-86187336 None:intergenic 35.0%
! GCAATTGATCAAACCTTTTG+AGG - Chr1:86185410-86185429 None:intergenic 35.0%
! GGATATTGATGATCTGGATA+AGG + Chr1:86190428-86190447 MsG0180005050.01.T01:CDS 35.0%
! TAATCCCCTTTTCTATGGTT+AGG + Chr1:86185457-86185476 MsG0180005050.01.T01:intron 35.0%
! TAGGTTCAGATTCAAGTTCT+TGG - Chr1:86188065-86188084 None:intergenic 35.0%
! TCAAAAACCATGGATTATGG+TGG + Chr1:86185972-86185991 MsG0180005050.01.T01:CDS 35.0%
! TCATGCTTTTATGTCCCATA+AGG + Chr1:86189551-86189570 MsG0180005050.01.T01:CDS 35.0%
! TCTTACGCAAAGGATTTTAC+AGG + Chr1:86186638-86186657 MsG0180005050.01.T01:CDS 35.0%
!! ACCTTCTCTCCTTTGAAATA+TGG + Chr1:86190853-86190872 MsG0180005050.01.T01:three_prime_UTR 35.0%
!! CAAAGAAGGTATCAGAAACA+AGG + Chr1:86188091-86188110 MsG0180005050.01.T01:CDS 35.0%
!! CTCTGAGGAGTTTTTACAAA+TGG + Chr1:86188015-86188034 MsG0180005050.01.T01:CDS 35.0%
!! CTTGTTTCTGATACCTTCTT+TGG - Chr1:86188093-86188112 None:intergenic 35.0%
!! GAAAGAGTATTGTGAATCAG+AGG + Chr1:86186081-86186100 MsG0180005050.01.T01:CDS 35.0%
!! GGTTGGAAAAAGTATCATCA+TGG + Chr1:86187911-86187930 MsG0180005050.01.T01:CDS 35.0%
!! TGTAATGGGTATCTTATCCA+CGG - Chr1:86186282-86186301 None:intergenic 35.0%
!!! AAGGTCACTTTTTAATGACG+GGG + Chr1:86185893-86185912 MsG0180005050.01.T01:CDS 35.0%
AAGTTCTTGGGCACATTTGT+TGG + Chr1:86190183-86190202 MsG0180005050.01.T01:CDS 40.0%
AATGTGAGTTAAGTCCTTCC+AGG + Chr1:86186885-86186904 MsG0180005050.01.T01:intron 40.0%
ACATGTCCCATAGAAACTTG+AGG - Chr1:86187761-86187780 None:intergenic 40.0%
ACTTCTCACTTGAGGGATTA+TGG + Chr1:86186662-86186681 MsG0180005050.01.T01:CDS 40.0%
AGAATAGTACTTTGGTCTGC+AGG - Chr1:86190159-86190178 None:intergenic 40.0%
AGAGGGAGATAATGTGGAAT+AGG - Chr1:86186621-86186640 None:intergenic 40.0%
AGGATAAATTGGGACCTGAA+AGG + Chr1:86188622-86188641 MsG0180005050.01.T01:intron 40.0%
AGTACTTCACCATCAACTTC+AGG + Chr1:86185927-86185946 MsG0180005050.01.T01:CDS 40.0%
AGTCACAAATCTTGCAGAAG+TGG + Chr1:86188402-86188421 MsG0180005050.01.T01:intron 40.0%
AGTGTCCATGAATTCCTTTG+AGG - Chr1:86189517-86189536 None:intergenic 40.0%
AGTTCTTGGGCACATTTGTT+GGG + Chr1:86190184-86190203 MsG0180005050.01.T01:CDS 40.0%
ATACCCATTACAGAATCCCA+CGG + Chr1:86186290-86186309 MsG0180005050.01.T01:CDS 40.0%
ATACCCATTACAGAATCCCA+TGG + Chr1:86186290-86186309 MsG0180005050.01.T01:CDS 40.0%
ATATTCCTCTGCCCAATTTC+AGG - Chr1:86186851-86186870 None:intergenic 40.0%
ATGAGAGGATAAAATCCGGA+GGG + Chr1:86190268-86190287 MsG0180005050.01.T01:CDS 40.0%
ATTATCTCCCTCTTACGCAA+AGG + Chr1:86186628-86186647 MsG0180005050.01.T01:CDS 40.0%
ATTGAAAGCAGATTAGGTGG+TGG + Chr1:86186059-86186078 MsG0180005050.01.T01:CDS 40.0%
CAGTTCCTCAAAGGAATTCA+TGG + Chr1:86189509-86189528 MsG0180005050.01.T01:intron 40.0%
CCAACCATAATTCCCTCTAA+AGG - Chr1:86188991-86189010 None:intergenic 40.0%
CTCTTCTCATTACTATGCCA+TGG - Chr1:86188693-86188712 None:intergenic 40.0%
CTGATGACAATCCTCAAAAC+TGG + Chr1:86189760-86189779 MsG0180005050.01.T01:CDS 40.0%
CTGCCTGTATATCTTATGGT+TGG - Chr1:86187675-86187694 None:intergenic 40.0%
CTTTCCCACACATGTATTCA+TGG - Chr1:86190765-86190784 None:intergenic 40.0%
GAAATCAAGTAAATGGGGTG+CGG + Chr1:86187562-86187581 MsG0180005050.01.T01:CDS 40.0%
GAATGGTAGAACAAGTGGTA+GGG + Chr1:86185833-86185852 MsG0180005050.01.T01:CDS 40.0%
GATATGACGAAGAAGATGGT+GGG + Chr1:86186180-86186199 MsG0180005050.01.T01:CDS 40.0%
GCCATATTTCAAAGGAGAGA+AGG - Chr1:86190857-86190876 None:intergenic 40.0%
GGAACACTGCTAGGATAAAT+TGG + Chr1:86188611-86188630 MsG0180005050.01.T01:intron 40.0%
GGTGATATCCTCTTATCAGA+AGG - Chr1:86187740-86187759 None:intergenic 40.0%
GTACTTCACCATCAACTTCA+GGG + Chr1:86185928-86185947 MsG0180005050.01.T01:CDS 40.0%
GTTAGGGTTTCAAGATCACT+AGG + Chr1:86185474-86185493 MsG0180005050.01.T01:intron 40.0%
TACAGGTACTTCTCACTTGA+GGG + Chr1:86186655-86186674 MsG0180005050.01.T01:CDS 40.0%
TATAGGTCTATTCCGGATAC+TGG + Chr1:86186137-86186156 MsG0180005050.01.T01:CDS 40.0%
TATCCACAGGAAAATGCTCT+CGG - Chr1:86186529-86186548 None:intergenic 40.0%
TATCTTTCTGATAGCAACCG+GGG + Chr1:86190234-86190253 MsG0180005050.01.T01:CDS 40.0%
TATGAGAGGATAAAATCCGG+AGG + Chr1:86190267-86190286 MsG0180005050.01.T01:CDS 40.0%
TCACCGAGAAAATTTGCATG+TGG + Chr1:86186349-86186368 MsG0180005050.01.T01:CDS 40.0%
TCAGGATATGACGAAGAAGA+TGG + Chr1:86186176-86186195 MsG0180005050.01.T01:CDS 40.0%
TCATAGTCCAATCGACCATT+AGG - Chr1:86187007-86187026 None:intergenic 40.0%
TCATGCATAATACCCCTTCT+TGG - Chr1:86187128-86187147 None:intergenic 40.0%
TCCTCAAGATACAGTAACCT+GGG + Chr1:86189644-86189663 MsG0180005050.01.T01:CDS 40.0%
TCTGGATGAGATGTAATGTC+TGG - Chr1:86187065-86187084 None:intergenic 40.0%
TGAATGGTAGAACAAGTGGT+AGG + Chr1:86185832-86185851 MsG0180005050.01.T01:CDS 40.0%
TGACAATCCTCAAAACTGGA+AGG + Chr1:86189764-86189783 MsG0180005050.01.T01:CDS 40.0%
TGATCTTATTGGCATGGGAT+TGG - Chr1:86188349-86188368 None:intergenic 40.0%
TGTGAATTATATGACCGCTC+AGG + Chr1:86190638-86190657 MsG0180005050.01.T01:three_prime_UTR 40.0%
TGTTTGTACTGCATCGTATG+TGG + Chr1:86188124-86188143 MsG0180005050.01.T01:CDS 40.0%
TTACAGGTACTTCTCACTTG+AGG + Chr1:86186654-86186673 MsG0180005050.01.T01:CDS 40.0%
TTAGAAACCTACAGACAAGC+TGG + Chr1:86187428-86187447 MsG0180005050.01.T01:CDS 40.0%
TTCAGAGGACTCAATTTCAC+CGG - Chr1:86185729-86185748 None:intergenic 40.0%
TTCCTCAAGATACAGTAACC+TGG + Chr1:86189643-86189662 MsG0180005050.01.T01:CDS 40.0%
TTCCTCATTTGATCAACAGG+AGG - Chr1:86185873-86185892 None:intergenic 40.0%
TTCTGATACCTTCTTTGGAC+AGG - Chr1:86188088-86188107 None:intergenic 40.0%
TTGGATACATTCATCCTGAG+CGG - Chr1:86190655-86190674 None:intergenic 40.0%
TTTCGCCTAGAAAAATGCTG+AGG - Chr1:86187869-86187888 None:intergenic 40.0%
! AATGAGTTGGAGAATGGAGA+AGG + Chr1:86187710-86187729 MsG0180005050.01.T01:CDS 40.0%
! ACTTCGCGTTTTTCCTCAAA+AGG + Chr1:86185394-86185413 MsG0180005050.01.T01:CDS 40.0%
! AGTGATTTTCTATGCTCGCA+TGG + Chr1:86186710-86186729 MsG0180005050.01.T01:CDS 40.0%
! ATATTCATCTTGTGCTGCTC+TGG - Chr1:86186948-86186967 None:intergenic 40.0%
! CAGGAAGGATATTGATGATC+TGG + Chr1:86190422-86190441 MsG0180005050.01.T01:CDS 40.0%
! CCTTTAGAGGGAATTATGGT+TGG + Chr1:86188988-86189007 MsG0180005050.01.T01:intron 40.0%
! CTTTTATGTCCCATAAGGCT+GGG + Chr1:86189556-86189575 MsG0180005050.01.T01:CDS 40.0%
! CTTTTCATGCTTGCAGGTAA+AGG + Chr1:86190096-86190115 MsG0180005050.01.T01:intron 40.0%
! GGATCACGCTTTAGTTTATC+AGG + Chr1:86188274-86188293 MsG0180005050.01.T01:intron 40.0%
! TGCAGACCAAAGTACTATTC+TGG + Chr1:86190158-86190177 MsG0180005050.01.T01:CDS 40.0%
! TGGGACCTGAAAGGTTTTTA+TGG + Chr1:86188631-86188650 MsG0180005050.01.T01:intron 40.0%
! TGTTTTATCAGCCCCACTAT+GGG - Chr1:86186570-86186589 None:intergenic 40.0%
!! GCTACTATGCTGCTTAGTTT+TGG + Chr1:86188463-86188482 MsG0180005050.01.T01:intron 40.0%
!! GGAAGTTGATGACATACAAG+CGG + Chr1:86189051-86189070 MsG0180005050.01.T01:intron 40.0%
!! GTAATGGGTATCTTATCCAC+GGG - Chr1:86186281-86186300 None:intergenic 40.0%
!! TGCAGGTAAAGGTTTTGTGA+GGG + Chr1:86190107-86190126 MsG0180005050.01.T01:intron 40.0%
!! TTGCAGGTAAAGGTTTTGTG+AGG + Chr1:86190106-86190125 MsG0180005050.01.T01:intron 40.0%
!! TTGTTTTATCAGCCCCACTA+TGG - Chr1:86186571-86186590 None:intergenic 40.0%
!!! TCACTTTTTAATGACGGGGT+TGG + Chr1:86185897-86185916 MsG0180005050.01.T01:CDS 40.0%
AAACCCATCACAGAATCCCA+CGG + Chr1:86186464-86186483 MsG0180005050.01.T01:CDS 45.0%
ACACTTACACCACCAGTATC+CGG - Chr1:86186152-86186171 None:intergenic 45.0%
ACCCAGGTTACTGTATCTTG+AGG - Chr1:86189648-86189667 None:intergenic 45.0%
ACTAGTAGGGGTCCTGAAAT+TGG + Chr1:86186836-86186855 MsG0180005050.01.T01:CDS 45.0%
ACTGCATCGTATGTGGTAGA+AGG + Chr1:86188131-86188150 MsG0180005050.01.T01:CDS 45.0%
AGTTGGCAGTGGTAGCAAAA+GGG + Chr1:86185767-86185786 MsG0180005050.01.T01:CDS 45.0%
ATAATCTGCATGCTCAGACC+TGG - Chr1:86186906-86186925 None:intergenic 45.0%
ATCCTGTTAAAACCGACGAG+AGG + Chr1:86190451-86190470 MsG0180005050.01.T01:CDS 45.0%
ATCTTTCTGATAGCAACCGG+GGG + Chr1:86190235-86190254 MsG0180005050.01.T01:CDS 45.0%
ATTACAGAATCCCATGGTGG+GGG + Chr1:86186296-86186315 MsG0180005050.01.T01:CDS 45.0%
ATTGGAGTACGGTAAAGAGC+AGG + Chr1:86190403-86190422 MsG0180005050.01.T01:CDS 45.0%
CAAGTGGTAGGGTTCAATCT+AGG + Chr1:86185844-86185863 MsG0180005050.01.T01:CDS 45.0%
CAGGAAATGAGTCAGCATGT+TGG + Chr1:86187458-86187477 MsG0180005050.01.T01:CDS 45.0%
CAGGGAGATTTGAGCATGAA+AGG + Chr1:86186408-86186427 MsG0180005050.01.T01:CDS 45.0%
CAGGGTTGAGACCTAGATAT+GGG + Chr1:86185946-86185965 MsG0180005050.01.T01:CDS 45.0%
CATCACACAATCCCATAGTG+GGG + Chr1:86186556-86186575 MsG0180005050.01.T01:CDS 45.0%
CATTACAGAATCCCATGGTG+GGG + Chr1:86186295-86186314 MsG0180005050.01.T01:CDS 45.0%
CCACCATGGGATTCTGTAAT+GGG - Chr1:86186296-86186315 None:intergenic 45.0%
CCACTATGGGATTGTGTGAT+GGG - Chr1:86186557-86186576 None:intergenic 45.0%
CCATCACACAATCCCATAGT+GGG + Chr1:86186555-86186574 MsG0180005050.01.T01:CDS 45.0%
CCATTACAGAATCCCATGGT+GGG + Chr1:86186294-86186313 MsG0180005050.01.T01:CDS 45.0%
CTAGTAGGGGTCCTGAAATT+GGG + Chr1:86186837-86186856 MsG0180005050.01.T01:CDS 45.0%
CTCCTCCTGTTGATCAAATG+AGG + Chr1:86185868-86185887 MsG0180005050.01.T01:CDS 45.0%
CTGGGAGATTTGAGCATGAA+AGG + Chr1:86186234-86186253 MsG0180005050.01.T01:CDS 45.0%
CTTATTGAGTAAAGGGGGAC+AGG + Chr1:86189995-86190014 MsG0180005050.01.T01:intron 45.0%
GATACCTTCTTTGGACAGGT+AGG - Chr1:86188084-86188103 None:intergenic 45.0%
GCAGTTCTTGTATACAGGAC+AGG + Chr1:86190568-86190587 MsG0180005050.01.T01:three_prime_UTR 45.0%
GGAAGAAAAGGAACACTGCT+AGG + Chr1:86188602-86188621 MsG0180005050.01.T01:intron 45.0%
GGACTATGAGCAAGCTGTAA+TGG + Chr1:86187018-86187037 MsG0180005050.01.T01:intron 45.0%
GGATATGACGAAGAAGATGG+TGG + Chr1:86186179-86186198 MsG0180005050.01.T01:CDS 45.0%
GGATGATTAGACAGTCACCA+AGG + Chr1:86190714-86190733 MsG0180005050.01.T01:three_prime_UTR 45.0%
GGATTATGGAAACTGCTCCA+TGG + Chr1:86186676-86186695 MsG0180005050.01.T01:CDS 45.0%
GGGATGAGAGCTAAACACTT+GGG + Chr1:86189576-86189595 MsG0180005050.01.T01:CDS 45.0%
GGTGAAATTGAGTCCTCTGA+AGG + Chr1:86185728-86185747 MsG0180005050.01.T01:CDS 45.0%
GGTGGTGTAAGTGTAACATC+AGG + Chr1:86186158-86186177 MsG0180005050.01.T01:CDS 45.0%
GTGGATGGAGTTAGAAGAGT+TGG + Chr1:86185750-86185769 MsG0180005050.01.T01:CDS 45.0%
TATCCACAGGCAAATGCTCT+CGG - Chr1:86186442-86186461 None:intergenic 45.0%
TCACGACGGTTTCTCCTAAA+CGG - Chr1:86185690-86185709 None:intergenic 45.0%
TCAGGGTTGAGACCTAGATA+TGG + Chr1:86185945-86185964 MsG0180005050.01.T01:CDS 45.0%
TCATCAATTGTGGATGGCCT+TGG - Chr1:86190734-86190753 None:intergenic 45.0%
TGAACCTACCTGTCCAAAGA+AGG + Chr1:86188077-86188096 MsG0180005050.01.T01:CDS 45.0%
TGACGACGACGACGAAAATT+TGG + Chr1:86185998-86186017 MsG0180005050.01.T01:CDS 45.0%
TGAGAGGATAAAATCCGGAG+GGG + Chr1:86190269-86190288 MsG0180005050.01.T01:CDS 45.0%
TGCGTAAGAGGGAGATAATG+TGG - Chr1:86186627-86186646 None:intergenic 45.0%
TGGGATGAGAGCTAAACACT+TGG + Chr1:86189575-86189594 MsG0180005050.01.T01:CDS 45.0%
TGGTTATGTGGCAATTGCAG+AGG + Chr1:86190350-86190369 MsG0180005050.01.T01:CDS 45.0%
TTAGGAGAAACCGTCGTGAT+GGG + Chr1:86185691-86185710 MsG0180005050.01.T01:CDS 45.0%
TTCATATCTGGATGCACCAG+AGG + Chr1:86187298-86187317 MsG0180005050.01.T01:CDS 45.0%
TTGAAGGGAGGGATTCTGAT+TGG + Chr1:86185805-86185824 MsG0180005050.01.T01:CDS 45.0%
TTTAGGAGAAACCGTCGTGA+TGG + Chr1:86185690-86185709 MsG0180005050.01.T01:CDS 45.0%
TTTCTATGCTCGCATGGTGA+TGG + Chr1:86186716-86186735 MsG0180005050.01.T01:CDS 45.0%
! GAAAACTTGCAGAAGGTGCA+GGG + Chr1:86186780-86186799 MsG0180005050.01.T01:CDS 45.0%
! GAAATTGAGTCCTCTGAAGG+TGG + Chr1:86185731-86185750 MsG0180005050.01.T01:CDS 45.0%
! GCTTTTATGTCCCATAAGGC+TGG + Chr1:86189555-86189574 MsG0180005050.01.T01:CDS 45.0%
! TACCCAGCAAAGGGTTGATT+CGG + Chr1:86185656-86185675 MsG0180005050.01.T01:CDS 45.0%
!! AGGAGAGAAGGTGCCTAAAA+AGG - Chr1:86190845-86190864 None:intergenic 45.0%
!! CAAACTTTGAAGGCATCCAG+AGG - Chr1:86188568-86188587 None:intergenic 45.0%
!! GCAGGTAAAGGTTTTGTGAG+GGG + Chr1:86190108-86190127 MsG0180005050.01.T01:intron 45.0%
!! GTGGTGGTGATGGATTTGAA+GGG + Chr1:86185790-86185809 MsG0180005050.01.T01:CDS 45.0%
!! TGGTGATGGATTTGAAGGGA+GGG + Chr1:86185794-86185813 MsG0180005050.01.T01:CDS 45.0%
!!! AGATTTTTAGTGGAACCGGG+TGG + Chr1:86188810-86188829 MsG0180005050.01.T01:intron 45.0%
!!! GAGAGCATTTTCCTGTGGAT+AGG + Chr1:86186528-86186547 MsG0180005050.01.T01:CDS 45.0%
AACCTTTCTTGCTGATGCCC+TGG - Chr1:86187380-86187399 None:intergenic 50.0%
ACCCGAATCAACCCTTTGCT+GGG - Chr1:86185661-86185680 None:intergenic 50.0%
AGCAGCGGAAAACTTGCAGA+AGG + Chr1:86186773-86186792 MsG0180005050.01.T01:CDS 50.0%
AGGACCCCTACTAGTGTCTA+TGG - Chr1:86186831-86186850 None:intergenic 50.0%
AGGTCTATTCCGGATACTGG+TGG + Chr1:86186140-86186159 MsG0180005050.01.T01:CDS 50.0%
ATCACAGAATCCCACGGTGA+GGG + Chr1:86186470-86186489 MsG0180005050.01.T01:CDS 50.0%
ATCACTCCTCCTCGTTTCCA+TGG - Chr1:86186696-86186715 None:intergenic 50.0%
ATGTTGGATCCTGCGATGCA+GGG - Chr1:86187160-86187179 None:intergenic 50.0%
ATTACAGAATCCCACGGTGG+AGG + Chr1:86186383-86186402 MsG0180005050.01.T01:CDS 50.0%
CAAGTTGCGTACCCAGCAAA+GGG + Chr1:86185647-86185666 MsG0180005050.01.T01:CDS 50.0%
CACGACGGTTTCTCCTAAAC+GGG - Chr1:86185689-86185708 None:intergenic 50.0%
CAGGACGGTTTGAGCATGAA+AGG + Chr1:86186321-86186340 MsG0180005050.01.T01:CDS 50.0%
CCACCCATAGACACTAGTAG+GGG + Chr1:86186824-86186843 MsG0180005050.01.T01:CDS 50.0%
CCACCGTGGGATTCTGTAAT+GGG - Chr1:86186383-86186402 None:intergenic 50.0%
CCATTAGGAGCTACCCTTCT+AGG - Chr1:86186992-86187011 None:intergenic 50.0%
CCCACCATGGGATTCTGTAA+TGG - Chr1:86186297-86186316 None:intergenic 50.0%
CCCACTATGGGATTGTGTGA+TGG - Chr1:86186558-86186577 None:intergenic 50.0%
CCCATCACACAATCCCATAG+TGG + Chr1:86186554-86186573 MsG0180005050.01.T01:CDS 50.0%
CCCATTACAGAATCCCATGG+TGG + Chr1:86186293-86186312 MsG0180005050.01.T01:CDS 50.0%
CCTAGAAGGGTAGCTCCTAA+TGG + Chr1:86186989-86187008 MsG0180005050.01.T01:intron 50.0%
CTAACTCCATCCACCTTCAG+AGG - Chr1:86185744-86185763 None:intergenic 50.0%
CTGTTAAAACCGACGAGAGG+CGG + Chr1:86190454-86190473 MsG0180005050.01.T01:CDS 50.0%
CTTTGCTGGGTACGCAACTT+GGG - Chr1:86185648-86185667 None:intergenic 50.0%
GAAACTGCTCCATGGAAACG+AGG + Chr1:86186684-86186703 MsG0180005050.01.T01:CDS 50.0%
GACAGATCAGGGAGACAAAG+TGG + Chr1:86190314-86190333 MsG0180005050.01.T01:CDS 50.0%
GAGTACGGTAAAGAGCAGGA+AGG + Chr1:86190407-86190426 MsG0180005050.01.T01:CDS 50.0%
GAGTTGGCAGTGGTAGCAAA+AGG + Chr1:86185766-86185785 MsG0180005050.01.T01:CDS 50.0%
GCCACCCATAGACACTAGTA+GGG + Chr1:86186823-86186842 MsG0180005050.01.T01:CDS 50.0%
GGACCCCTACTAGTGTCTAT+GGG - Chr1:86186830-86186849 None:intergenic 50.0%
GGAGTTAGAAGAGTTGGCAG+TGG + Chr1:86185756-86185775 MsG0180005050.01.T01:CDS 50.0%
GGTAGCTCCTAATGGTCGAT+TGG + Chr1:86186997-86187016 MsG0180005050.01.T01:intron 50.0%
GGTCTCAACCCTGAAGTTGA+TGG - Chr1:86185939-86185958 None:intergenic 50.0%
GTCAGCACCACCATAATCCA+TGG - Chr1:86185982-86186001 None:intergenic 50.0%
GTTGGCAGTGGTAGCAAAAG+GGG + Chr1:86185768-86185787 MsG0180005050.01.T01:CDS 50.0%
TAGCTCTCATCCCAGCCTTA+TGG - Chr1:86189569-86189588 None:intergenic 50.0%
TAGTGTCTATGGGTGGCCTT+TGG - Chr1:86186820-86186839 None:intergenic 50.0%
TATCCACGGGCAAATGCTCT+CGG - Chr1:86186268-86186287 None:intergenic 50.0%
TATGATCAGCCTAGGAGCAG+CGG + Chr1:86186758-86186777 MsG0180005050.01.T01:CDS 50.0%
TATGTTGGATCCTGCGATGC+AGG - Chr1:86187161-86187180 None:intergenic 50.0%
TCACCGTGGGATTCTGTGAT+GGG - Chr1:86186470-86186489 None:intergenic 50.0%
TCATGCTCAAATCTCCCAGC+TGG - Chr1:86186233-86186252 None:intergenic 50.0%
TCCACCGTGGGATTCTGTAA+TGG - Chr1:86186384-86186403 None:intergenic 50.0%
TCTCATAATCAGCTCTCCCC+CGG - Chr1:86190254-86190273 None:intergenic 50.0%
TGTGGCAATTGCAGAGGACT+TGG + Chr1:86190356-86190375 MsG0180005050.01.T01:CDS 50.0%
TTATGATCACCGCCTCTCGT+CGG - Chr1:86190466-86190485 None:intergenic 50.0%
TTGGGCCAAAGCTTCAGCAT+GGG - Chr1:86189685-86189704 None:intergenic 50.0%
TTTGGGCCAAAGCTTCAGCA+TGG - Chr1:86189686-86189705 None:intergenic 50.0%
! ACCCAGCAAAGGGTTGATTC+GGG + Chr1:86185657-86185676 MsG0180005050.01.T01:CDS 50.0%
! AGCTCTCATCCCAGCCTTAT+GGG - Chr1:86189568-86189587 None:intergenic 50.0%
! GGAAAACTTGCAGAAGGTGC+AGG + Chr1:86186779-86186798 MsG0180005050.01.T01:CDS 50.0%
! GGTGATGGCTATTTGCGTTC+TGG + Chr1:86187227-86187246 MsG0180005050.01.T01:CDS 50.0%
! GGTTTAGTGGACATGGCCAA+AGG + Chr1:86186801-86186820 MsG0180005050.01.T01:CDS 50.0%
! TGAAGCTTTGGCCCAAAAGG+AGG + Chr1:86189689-86189708 MsG0180005050.01.T01:CDS 50.0%
! TGCTGAAGCTTTGGCCCAAA+AGG + Chr1:86189686-86189705 MsG0180005050.01.T01:CDS 50.0%
! TTGAGTCCTCTGAAGGTGGA+TGG + Chr1:86185735-86185754 MsG0180005050.01.T01:CDS 50.0%
! TTGGGCACATTTGTTGGGCT+GGG + Chr1:86190189-86190208 MsG0180005050.01.T01:CDS 50.0%
!! GAGAGCATTTGCCTGTGGAT+AGG + Chr1:86186441-86186460 MsG0180005050.01.T01:CDS 50.0%
!! GGTGGTGGTGATGGATTTGA+AGG + Chr1:86185789-86185808 MsG0180005050.01.T01:CDS 50.0%
!! GTGATGGGTTTCCTATCCAC+AGG - Chr1:86186455-86186474 None:intergenic 50.0%
!! GTGGTGATGGATTTGAAGGG+AGG + Chr1:86185793-86185812 MsG0180005050.01.T01:CDS 50.0%
!! TTTTTAGTGGAACCGGGTGG+AGG + Chr1:86188813-86188832 MsG0180005050.01.T01:intron 50.0%
!!! TCACCGAGAGCATTTTCCTG+TGG + Chr1:86186523-86186542 MsG0180005050.01.T01:CDS 50.0%
AACTCCTCAGAGCCCTCAGT+TGG - Chr1:86188007-86188026 None:intergenic 55.0%
AATCCCACGGTGAGGGAACA+GGG + Chr1:86186477-86186496 MsG0180005050.01.T01:CDS 55.0%
AATCCCACGGTGGAGGAACA+GGG + Chr1:86186390-86186409 MsG0180005050.01.T01:CDS 55.0%
ACGGATCCAACCCATCACGA+CGG - Chr1:86185704-86185723 None:intergenic 55.0%
ACTGCTCCATGGAAACGAGG+AGG + Chr1:86186687-86186706 MsG0180005050.01.T01:CDS 55.0%
AGTGGTAGCAAAAGGGGTGG+TGG + Chr1:86185774-86185793 MsG0180005050.01.T01:CDS 55.0%
ATATCCCTGTTCCCTCACCG+TGG - Chr1:86186484-86186503 None:intergenic 55.0%
ATTCGGGTCCTGACCCGTTT+AGG + Chr1:86185673-86185692 MsG0180005050.01.T01:CDS 55.0%
CACTCTGCCAGCTTGTCTGT+AGG - Chr1:86187438-86187457 None:intergenic 55.0%
CATCACAGAATCCCACGGTG+AGG + Chr1:86186469-86186488 MsG0180005050.01.T01:CDS 55.0%
CCAAGTTGCGTACCCAGCAA+AGG + Chr1:86185646-86185665 MsG0180005050.01.T01:CDS 55.0%
CCCATTACAGAATCCCACGG+TGG + Chr1:86186380-86186399 MsG0180005050.01.T01:CDS 55.0%
CCCCTACTAGTGTCTATGGG+TGG - Chr1:86186827-86186846 None:intergenic 55.0%
CCTTTGCTGGGTACGCAACT+TGG - Chr1:86185649-86185668 None:intergenic 55.0%
CGGTTTCTCCTAAACGGGTC+AGG - Chr1:86185684-86185703 None:intergenic 55.0%
CTCACCGTGGGATTCTGTGA+TGG - Chr1:86186471-86186490 None:intergenic 55.0%
CTTGCCCCATGCTGAAGCTT+TGG + Chr1:86189677-86189696 MsG0180005050.01.T01:CDS 55.0%
GACCCGAATCAACCCTTTGC+TGG - Chr1:86185662-86185681 None:intergenic 55.0%
GGACTCAATTTCACCGGCGA+CGG - Chr1:86185723-86185742 None:intergenic 55.0%
GGCCACCCATAGACACTAGT+AGG + Chr1:86186822-86186841 MsG0180005050.01.T01:CDS 55.0%
GGGGGAGAGCTGATTATGAG+AGG + Chr1:86190253-86190272 MsG0180005050.01.T01:CDS 55.0%
GTTACAGCTTGTGACCCCTC+CGG - Chr1:86190286-86190305 None:intergenic 55.0%
TACAGTAACCTGGGTTCCCC+AGG + Chr1:86189653-86189672 MsG0180005050.01.T01:CDS 55.0%
TATCCCTGTTCCCTCACCGT+GGG - Chr1:86186483-86186502 None:intergenic 55.0%
TCTGCATGCTCAGACCTGGA+AGG - Chr1:86186902-86186921 None:intergenic 55.0%
TGGGCCAAAGCTTCAGCATG+GGG - Chr1:86189684-86189703 None:intergenic 55.0%
TTCAGCATGGGGCAAGACCT+GGG - Chr1:86189673-86189692 None:intergenic 55.0%
! AGCAAAAGGGGTGGTGGTGA+TGG + Chr1:86185780-86185799 MsG0180005050.01.T01:CDS 55.0%
! CTCCAGGGCATCAGCAAGAA+AGG + Chr1:86187375-86187394 MsG0180005050.01.T01:CDS 55.0%
! CTTGGGCACATTTGTTGGGC+TGG + Chr1:86190188-86190207 MsG0180005050.01.T01:CDS 55.0%
! GAGCACTGTAAACCTCCACC+CGG - Chr1:86188828-86188847 None:intergenic 55.0%
! GCAAGTTTTCCGCTGCTCCT+AGG - Chr1:86186770-86186789 None:intergenic 55.0%
! GCAGAAGGTGCAGGGTTTAG+TGG + Chr1:86186788-86186807 MsG0180005050.01.T01:CDS 55.0%
! GGTGCAGGGTTTAGTGGACA+TGG + Chr1:86186794-86186813 MsG0180005050.01.T01:CDS 55.0%
!! ACACCGAGAGCATTTGCCTG+TGG + Chr1:86186436-86186455 MsG0180005050.01.T01:CDS 55.0%
!! GAGAAACCGTCGTGATGGGT+TGG + Chr1:86185695-86185714 MsG0180005050.01.T01:CDS 55.0%
!!! CGCCTCTCGTCGGTTTTAAC+AGG - Chr1:86190456-86190475 None:intergenic 55.0%
ATCTCCCTGTTCCTCCACCG+TGG - Chr1:86186397-86186416 None:intergenic 60.0%
CAGACAAGCTGGCAGAGTGC+AGG + Chr1:86187439-86187458 MsG0180005050.01.T01:CDS 60.0%
CCAGCTGGCACACTCCTTGA+CGG - Chr1:86186218-86186237 None:intergenic 60.0%
CTCAGAGCCCTCAGTTGGCT+CGG - Chr1:86188002-86188021 None:intergenic 60.0%
CTCGAAGAGATGGCGCTCCA+GGG + Chr1:86187360-86187379 MsG0180005050.01.T01:CDS 60.0%
CTTCAGCATGGGGCAAGACC+TGG - Chr1:86189674-86189693 None:intergenic 60.0%
GAATCCCACGGTGAGGGAAC+AGG + Chr1:86186476-86186495 MsG0180005050.01.T01:CDS 60.0%
GAATCCCACGGTGGAGGAAC+AGG + Chr1:86186389-86186408 MsG0180005050.01.T01:CDS 60.0%
GCAGAACCCGAGCCAACTGA+GGG + Chr1:86187992-86188011 MsG0180005050.01.T01:CDS 60.0%
GCATAACCACCCTGCATCGC+AGG + Chr1:86187148-86187167 MsG0180005050.01.T01:CDS 60.0%
GGCAGTGGTAGCAAAAGGGG+TGG + Chr1:86185771-86185790 MsG0180005050.01.T01:CDS 60.0%
GGGGTCCTGAAATTGGGCAG+AGG + Chr1:86186843-86186862 MsG0180005050.01.T01:CDS 60.0%
TCAGCATGGGGCAAGACCTG+GGG - Chr1:86189672-86189691 None:intergenic 60.0%
TCTCCCTGTTCCTCCACCGT+GGG - Chr1:86186396-86186415 None:intergenic 60.0%
TCTCGAAGAGATGGCGCTCC+AGG + Chr1:86187359-86187378 MsG0180005050.01.T01:CDS 60.0%
TGCAGAACCCGAGCCAACTG+AGG + Chr1:86187991-86188010 MsG0180005050.01.T01:CDS 60.0%
TTGGATCCTGCGATGCAGGG+TGG - Chr1:86187157-86187176 None:intergenic 60.0%
! CGTCAAGGAGTGTGCCAGCT+GGG + Chr1:86186216-86186235 MsG0180005050.01.T01:CDS 60.0%
! GAATCCCATGGTGGGGGTAC+AGG + Chr1:86186302-86186321 MsG0180005050.01.T01:CDS 60.0%
! TCAGAGCCCTCAGTTGGCTC+GGG - Chr1:86188001-86188020 None:intergenic 60.0%
! TTGGGCTGGGAGATGCAGAG+AGG + Chr1:86190202-86190221 MsG0180005050.01.T01:CDS 60.0%
!! TCACCGAGAGCATTTGCCCG+TGG + Chr1:86186262-86186281 MsG0180005050.01.T01:CDS 60.0%
!! TGATGGGTTGGATCCGTCGC+CGG + Chr1:86185707-86185726 MsG0180005050.01.T01:CDS 60.0%
ACCGTCCTGTACCCCCACCA+TGG - Chr1:86186310-86186329 None:intergenic 65.0%
CCGTCCTGTACCCCCACCAT+GGG - Chr1:86186309-86186328 None:intergenic 65.0%
CGAGCCAACTGAGGGCTCTG+AGG + Chr1:86188000-86188019 MsG0180005050.01.T01:CDS 65.0%
GCTGGCACACTCCTTGACGG+TGG - Chr1:86186215-86186234 None:intergenic 65.0%
GGCACACTCCTTGACGGTGG+AGG - Chr1:86186212-86186231 None:intergenic 65.0%
GGCGTTTGCCTCCACCGTCA+AGG + Chr1:86186201-86186220 MsG0180005050.01.T01:CDS 65.0%
! CCCATGGTGGGGGTACAGGA+CGG + Chr1:86186306-86186325 MsG0180005050.01.T01:CDS 65.0%
! CCGTCAAGGAGTGTGCCAGC+TGG + Chr1:86186215-86186234 MsG0180005050.01.T01:CDS 65.0%
GGGCAAGACCTGGGGAACCC+AGG - Chr1:86189664-86189683 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 86185389 86190976 86185389 ID=MsG0180005050.01;Name=MsG0180005050.01
Chr1 mRNA 86185389 86190976 86185389 ID=MsG0180005050.01.T01;Parent=MsG0180005050.01;Name=MsG0180005050.01.T01;_AED=0.19;_eAED=0.19;_QI=0|0.5|0.4|1|0.75|0.6|5|497|1029
Chr1 exon 86185389 86185415 86185389 ID=MsG0180005050.01.T01:exon:9891;Parent=MsG0180005050.01.T01
Chr1 exon 86185603 86186887 86185603 ID=MsG0180005050.01.T01:exon:9892;Parent=MsG0180005050.01.T01
Chr1 exon 86187054 86188152 86187054 ID=MsG0180005050.01.T01:exon:9893;Parent=MsG0180005050.01.T01
Chr1 exon 86189512 86189822 86189512 ID=MsG0180005050.01.T01:exon:9894;Parent=MsG0180005050.01.T01
Chr1 exon 86190112 86190976 86190112 ID=MsG0180005050.01.T01:exon:9895;Parent=MsG0180005050.01.T01
Chr1 CDS 86185389 86185415 86185389 ID=MsG0180005050.01.T01:cds;Parent=MsG0180005050.01.T01
Chr1 CDS 86185603 86186887 86185603 ID=MsG0180005050.01.T01:cds;Parent=MsG0180005050.01.T01
Chr1 CDS 86187054 86188152 86187054 ID=MsG0180005050.01.T01:cds;Parent=MsG0180005050.01.T01
Chr1 CDS 86189512 86189822 86189512 ID=MsG0180005050.01.T01:cds;Parent=MsG0180005050.01.T01
Chr1 CDS 86190112 86190479 86190112 ID=MsG0180005050.01.T01:cds;Parent=MsG0180005050.01.T01
Chr1 three_prime_UTR 86190480 86190976 86190480 ID=MsG0180005050.01.T01:three_prime_utr;Parent=MsG0180005050.01.T01
Gene Sequence

>MsG0180005050.01.T01

ATGCAACTTCGCGTTTTTCCTCAAAAGTTCAGACAGCGCGAAGAAGATCATGTTTCAGTTTCTCTCTCTCCCAAGTTGCGTACCCAGCAAAGGGTTGATTCGGGTCCTGACCCGTTTAGGAGAAACCGTCGTGATGGGTTGGATCCGTCGCCGGTGAAATTGAGTCCTCTGAAGGTGGATGGAGTTAGAAGAGTTGGCAGTGGTAGCAAAAGGGGTGGTGGTGATGGATTTGAAGGGAGGGATTCTGATTGGCATTTGAATGGTAGAACAAGTGGTAGGGTTCAATCTAGGTCTCCTCCTGTTGATCAAATGAGGAAAAGGTCACTTTTTAATGACGGGGTTGGTTGTAGAAGTACTTCACCATCAACTTCAGGGTTGAGACCTAGATATGGGTATTCAAAAACCATGGATTATGGTGGTGCTGACGACGACGACGAAAATTTGGATATGAAACGTGTTTATCTTGATGGAGATAAGGATTTGATTGAAAGCAGATTAGGTGGTGGAAAGAGTATTGTGAATCAGAGGTTTTTGAGAAGTGAAAATGAAGTTGGAAGTTCATATAGGTCTATTCCGGATACTGGTGGTGTAAGTGTAACATCAGGATATGACGAAGAAGATGGTGGGCGTTTGCCTCCACCGTCAAGGAGTGTGCCAGCTGGGAGATTTGAGCATGAAAGGCTGCATCACCGAGAGCATTTGCCCGTGGATAAGATACCCATTACAGAATCCCATGGTGGGGGTACAGGACGGTTTGAGCATGAAAGGCTGCATCACCGAGAAAATTTGCATGTGGATAAGATACCCATTACAGAATCCCACGGTGGAGGAACAGGGAGATTTGAGCATGAAAGGCTGCAACACCGAGAGCATTTGCCTGTGGATAGGAAACCCATCACAGAATCCCACGGTGAGGGAACAGGGATATTTGAGCATGAAAGACTGCATCACCGAGAGCATTTTCCTGTGGATAGGAAACCCATCACACAATCCCATAGTGGGGCTGATAAAACAATGTTTTATGCAAGAGATAGGGATGCTTCCTATTCCACATTATCTCCCTCTTACGCAAAGGATTTTACAGGTACTTCTCACTTGAGGGATTATGGAAACTGCTCCATGGAAACGAGGAGGAGTGATTTTCTATGCTCGCATGGTGATGGTGTCTGTTCACTTTCATCTTATGATCAGCCTAGGAGCAGCGGAAAACTTGCAGAAGGTGCAGGGTTTAGTGGACATGGCCAAAGGCCACCCATAGACACTAGTAGGGGTCCTGAAATTGGGCAGAGGAATATTAGGTGCGACCATCAATGGAGTTGTCCAGACATTACATCTCATCCAGATTTAGATAGAACTGGTAAGAGTGAAGATTATTATGGAAATCCAAGAAGGGGTATTATGCATGAGCATAACCACCCTGCATCGCAGGATCCAACATATGTAGACTATCATGATATGAGAAGAACATCAATTCAATCAAAACAGGGTGATGGCTATTTGCGTTCTGGATATAATCATACTGAAATTAGAAAAAGAATGCCAAATGATTATGAAGTTTCATATCTGGATGCACCAGAGGCATATCATCAAATATCAAATTATAGAACAGAATATGAATCTCGAAGAGATGGCGCTCCAGGGCATCAGCAAGAAAGGTTTCAGAGTTCACCTCTGTCTAAGCATGATTTAGAAACCTACAGACAAGCTGGCAGAGTGCAGGAAATGAGTCAGCATGTTGGCATTCATAACCATTCAGATAGACTTGTGAAAAGAAAATACTATGCCAATGAAGAAATAGATGTTCGTGATTTGAGAAAAATGAAATCAAGTAAATGGGGTGCGGCTGAAGAATATCAAGATTATTATGAAAGTGAAGAGTGGGTAGATGATGAAGACATGAATATGGCGTATTCATATAAAAATGTTGGATCCAACCATAAGATATACAGGCAGCATAAGAATAAATACAATGAGTTGGAGAATGGAGAAGGTTTTCCTTCTGATAAGAGGATATCACCTCAAGTTTCTATGGGACATGTACAAAGACCATCATTTCGATTTCAGAAGTATTCCAATCAAAATATAAGACATCATTCAAAGTCTAGTTCATCAAACTGGTATAAACCTCAGCATTTTTCTAGGCGAAATGCAAATCAAAAACAACCTAAAGGTTGGAAAAAGTATCATCATGGATATAATGAGAACAAGCATACGATTAATGACGAATCATATGAAGATGTGGCAAGTGCTGCAGAACCCGAGCCAACTGAGGGCTCTGAGGAGTTTTTACAAATGGTACATGAGAATTTCTTAACGTACTCCAAGAACTTGAATCTGAACCTACCTGTCCAAAGAAGGTATCAGAAACAAGGAAAAGCTGGTTGTTTGTACTGCATCGTATGTGGTAGAAGTTCCTCAAAGGAATTCATGGACACTCGAAGCTTAGTTACTCATGCTTTTATGTCCCATAAGGCTGGGATGAGAGCTAAACACTTGGGTCTTCACAAAGCAATATGTGTTATGATGGGATGGGATACTGATATTCCTCAAGATACAGTAACCTGGGTTCCCCAGGTCTTGCCCCATGCTGAAGCTTTGGCCCAAAAGGAGGATTTGATTCTTTGGCCACCAGTTGTTATCATCCATAATATTTCAATGTCTGATGACAATCCTCAAAACTGGAAGGTTATAAGTATGGAAACAATTGAGGCGTTTATAAGAGGTAAAGGTTTTGTGAGGGGACGAATCAAATTATGCTTAGGGAAGCCTGCAGACCAAAGTACTATTCTGGTGAAGTTCTTGGGCACATTTGTTGGGCTGGGAGATGCAGAGAGGATTCATAAATATCTTTCTGATAGCAACCGGGGGAGAGCTGATTATGAGAGGATAAAATCCGGAGGGGTCACAAGCTGTAACATTGAAGAGACAGATCAGGGAGACAAAGTGGAGAGTTTTCTTTATGGTTATGTGGCAATTGCAGAGGACTTGGAGAAACTAGATTTCAATAGCAAGAATTGGAGTACGGTAAAGAGCAGGAAGGATATTGATGATCTGGATAAGGATCCTGTTAAAACCGACGAGAGGCGGTGA
Protein sequence

>MsG0180005050.01.T01

MQLRVFPQKFRQREEDHVSVSLSPKLRTQQRVDSGPDPFRRNRRDGLDPSPVKLSPLKVDGVRRVGSGSKRGGGDGFEGRDSDWHLNGRTSGRVQSRSPPVDQMRKRSLFNDGVGCRSTSPSTSGLRPRYGYSKTMDYGGADDDDENLDMKRVYLDGDKDLIESRLGGGKSIVNQRFLRSENEVGSSYRSIPDTGGVSVTSGYDEEDGGRLPPPSRSVPAGRFEHERLHHREHLPVDKIPITESHGGGTGRFEHERLHHRENLHVDKIPITESHGGGTGRFEHERLQHREHLPVDRKPITESHGEGTGIFEHERLHHREHFPVDRKPITQSHSGADKTMFYARDRDASYSTLSPSYAKDFTGTSHLRDYGNCSMETRRSDFLCSHGDGVCSLSSYDQPRSSGKLAEGAGFSGHGQRPPIDTSRGPEIGQRNIRCDHQWSCPDITSHPDLDRTGKSEDYYGNPRRGIMHEHNHPASQDPTYVDYHDMRRTSIQSKQGDGYLRSGYNHTEIRKRMPNDYEVSYLDAPEAYHQISNYRTEYESRRDGAPGHQQERFQSSPLSKHDLETYRQAGRVQEMSQHVGIHNHSDRLVKRKYYANEEIDVRDLRKMKSSKWGAAEEYQDYYESEEWVDDEDMNMAYSYKNVGSNHKIYRQHKNKYNELENGEGFPSDKRISPQVSMGHVQRPSFRFQKYSNQNIRHHSKSSSSNWYKPQHFSRRNANQKQPKGWKKYHHGYNENKHTINDESYEDVASAAEPEPTEGSEEFLQMVHENFLTYSKNLNLNLPVQRRYQKQGKAGCLYCIVCGRSSSKEFMDTRSLVTHAFMSHKAGMRAKHLGLHKAICVMMGWDTDIPQDTVTWVPQVLPHAEALAQKEDLILWPPVVIIHNISMSDDNPQNWKVISMETIEAFIRGKGFVRGRIKLCLGKPADQSTILVKFLGTFVGLGDAERIHKYLSDSNRGRADYERIKSGGVTSCNIEETDQGDKVESFLYGYVAIAEDLEKLDFNSKNWSTVKSRKDIDDLDKDPVKTDERR*