Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043837.01.T02 | XP_013445078.1 | 67.399 | 273 | 76 | 2 | 1 | 260 | 6 | 278 | 1.07E-126 | 378 |
| MsG0880043837.01.T01 | GAU49396.1 | 69.776 | 268 | 78 | 1 | 1 | 268 | 1 | 265 | 1.04E-128 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043837.01.T01 | A0A2Z6P0Y9 | 69.776 | 268 | 78 | 1 | 1 | 268 | 1 | 265 | 4.98e-129 | 383 |
| MsG0880043837.01.T02 | Q1RU73 | 67.399 | 273 | 76 | 2 | 1 | 260 | 6 | 278 | 5.10e-127 | 378 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005240.01 | MsG0880043837.01 | 0.805392 | 1.364988e-49 | 7.212842e-47 |
| MsG0880042161.01 | MsG0880043837.01 | 0.808270 | 3.364200e-50 | 1.915174e-47 |
| MsG0880043157.01 | MsG0880043837.01 | 0.803456 | 3.456776e-49 | 1.737881e-46 |
| MsG0880043837.01 | MsG0880046809.01 | 0.805214 | 1.486914e-49 | 7.821430e-47 |
| MsG0880043837.01 | MsG0880047055.01 | -0.806640 | 7.457323e-50 | 4.068308e-47 |
| MsG0680033465.01 | MsG0880043837.01 | 0.800315 | 1.526644e-48 | 7.086615e-46 |
| MsG0480018653.01 | MsG0880043837.01 | 0.803635 | 3.173495e-49 | 1.602819e-46 |
| MsG0480021056.01 | MsG0880043837.01 | 0.801310 | 9.563169e-49 | 4.552390e-46 |
| MsG0280008113.01 | MsG0880043837.01 | 0.805259 | 1.455592e-49 | 7.665015e-47 |
| MsG0280008894.01 | MsG0880043837.01 | 0.807636 | 4.588808e-50 | 2.569034e-47 |
| MsG0280010349.01 | MsG0880043837.01 | 0.802611 | 5.168687e-49 | 2.543048e-46 |
| MsG0280010350.01 | MsG0880043837.01 | 0.805137 | 1.543488e-49 | 8.103118e-47 |
| MsG0280010517.01 | MsG0880043837.01 | 0.812126 | 4.959998e-51 | 3.127231e-48 |
| MsG0780036014.01 | MsG0880043837.01 | 0.800922 | 1.148086e-48 | 5.412053e-46 |
| MsG0780038907.01 | MsG0880043837.01 | 0.838586 | 2.633312e-57 | 3.543234e-54 |
| MsG0780039178.01 | MsG0880043837.01 | 0.802983 | 4.330379e-49 | 2.150780e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043837.01.T02 | MTR_8g037923 | 67.399 | 273 | 76 | 2 | 1 | 260 | 6 | 278 | 1.29e-130 | 378 |
| MsG0880043837.01.T02 | MTR_8g042170 | 67.041 | 267 | 79 | 4 | 1 | 260 | 1 | 265 | 2.23e-124 | 362 |
| MsG0880043837.01.T02 | MTR_8g042080 | 80.000 | 170 | 34 | 0 | 1 | 170 | 1 | 170 | 2.51e-102 | 295 |
| MsG0880043837.01.T02 | MTR_8g037920 | 64.384 | 219 | 67 | 1 | 46 | 253 | 6 | 224 | 5.70e-99 | 295 |
| MsG0880043837.01.T02 | MTR_8g042400 | 58.710 | 155 | 60 | 3 | 107 | 260 | 1 | 152 | 1.38e-54 | 179 |
| MsG0880043837.01.T02 | MTR_7g060320 | 33.582 | 268 | 135 | 7 | 1 | 237 | 7 | 262 | 6.58e-38 | 138 |
| MsG0880043837.01.T02 | MTR_7g060310 | 39.362 | 188 | 93 | 3 | 1 | 179 | 8 | 183 | 1.59e-37 | 138 |
| MsG0880043837.01.T02 | MTR_7g059810 | 36.585 | 246 | 120 | 9 | 24 | 243 | 26 | 261 | 8.63e-37 | 135 |
| MsG0880043837.01.T02 | MTR_7g059515 | 39.362 | 188 | 90 | 6 | 1 | 179 | 6 | 178 | 6.57e-36 | 127 |
| MsG0880043837.01.T02 | MTR_7g060115 | 33.992 | 253 | 124 | 8 | 20 | 237 | 21 | 265 | 1.46e-35 | 132 |
| MsG0880043837.01.T02 | MTR_7g060020 | 40.828 | 169 | 83 | 4 | 20 | 179 | 25 | 185 | 1.70e-35 | 131 |
| MsG0880043837.01.T02 | MTR_7g446270 | 34.553 | 246 | 116 | 9 | 20 | 230 | 25 | 260 | 2.68e-35 | 132 |
| MsG0880043837.01.T02 | MTR_0182s0060 | 33.700 | 273 | 136 | 9 | 1 | 233 | 7 | 274 | 6.21e-35 | 131 |
| MsG0880043837.01.T02 | MTR_7g060370 | 38.220 | 191 | 92 | 6 | 1 | 179 | 7 | 183 | 7.73e-34 | 127 |
| MsG0880043837.01.T02 | MTR_7g059540 | 38.660 | 194 | 91 | 6 | 1 | 180 | 7 | 186 | 1.44e-32 | 124 |
| MsG0880043837.01.T02 | MTR_7g059540 | 38.660 | 194 | 91 | 6 | 1 | 180 | 8 | 187 | 1.52e-32 | 124 |
| MsG0880043837.01.T02 | MTR_7g059480 | 39.759 | 166 | 82 | 5 | 24 | 179 | 25 | 182 | 9.52e-32 | 123 |
| MsG0880043837.01.T02 | MTR_7g060260 | 40.000 | 170 | 85 | 4 | 20 | 180 | 22 | 183 | 1.42e-31 | 120 |
| MsG0880043837.01.T02 | MTR_7g060840 | 37.696 | 191 | 95 | 6 | 1 | 179 | 7 | 185 | 1.73e-31 | 120 |
| MsG0880043837.01.T02 | MTR_7g060220 | 33.906 | 233 | 115 | 7 | 20 | 227 | 21 | 239 | 1.53e-29 | 115 |
| MsG0880043837.01.T02 | MTR_7g060330 | 33.471 | 242 | 121 | 9 | 22 | 238 | 28 | 254 | 1.82e-29 | 115 |
| MsG0880043837.01.T02 | MTR_7g060060 | 39.716 | 141 | 68 | 4 | 48 | 179 | 1 | 133 | 1.01e-24 | 98.6 |
| MsG0880043837.01.T02 | MTR_7g060160 | 29.958 | 237 | 119 | 6 | 1 | 227 | 6 | 205 | 1.69e-23 | 98.6 |
| MsG0880043837.01.T02 | MTR_1g048070 | 32.967 | 182 | 84 | 5 | 1 | 175 | 7 | 157 | 1.45e-21 | 90.5 |
| MsG0880043837.01.T02 | MTR_7g059510 | 35.484 | 155 | 61 | 3 | 15 | 169 | 20 | 135 | 1.03e-19 | 88.2 |
| MsG0880043837.01.T02 | MTR_7g059475 | 36.036 | 111 | 62 | 2 | 78 | 179 | 2 | 112 | 1.91e-15 | 74.3 |
| MsG0880043837.01.T02 | MTR_7g060200 | 35.455 | 110 | 52 | 4 | 69 | 169 | 1 | 100 | 7.09e-13 | 66.2 |
| MsG0880043837.01.T01 | MTR_8g037923 | 67.273 | 275 | 77 | 2 | 7 | 268 | 4 | 278 | 7.17e-132 | 382 |
| MsG0880043837.01.T01 | MTR_8g042170 | 67.041 | 267 | 79 | 4 | 9 | 268 | 1 | 265 | 1.92e-124 | 362 |
| MsG0880043837.01.T01 | MTR_8g042080 | 80.000 | 170 | 34 | 0 | 9 | 178 | 1 | 170 | 2.26e-102 | 295 |
| MsG0880043837.01.T01 | MTR_8g037920 | 64.384 | 219 | 67 | 1 | 54 | 261 | 6 | 224 | 5.93e-99 | 295 |
| MsG0880043837.01.T01 | MTR_8g042400 | 58.710 | 155 | 60 | 3 | 115 | 268 | 1 | 152 | 1.60e-54 | 179 |
| MsG0880043837.01.T01 | MTR_7g060310 | 39.474 | 190 | 94 | 3 | 7 | 187 | 6 | 183 | 3.64e-38 | 140 |
| MsG0880043837.01.T01 | MTR_7g060320 | 33.582 | 268 | 135 | 7 | 9 | 245 | 7 | 262 | 7.42e-38 | 139 |
| MsG0880043837.01.T01 | MTR_7g059810 | 36.585 | 246 | 120 | 9 | 32 | 251 | 26 | 261 | 8.30e-37 | 135 |
| MsG0880043837.01.T01 | MTR_7g059515 | 40.526 | 190 | 88 | 7 | 7 | 187 | 5 | 178 | 5.01e-36 | 128 |
| MsG0880043837.01.T01 | MTR_7g446270 | 37.019 | 208 | 104 | 7 | 7 | 201 | 5 | 198 | 1.08e-35 | 133 |
| MsG0880043837.01.T01 | MTR_7g060115 | 33.992 | 253 | 124 | 8 | 28 | 245 | 21 | 265 | 1.20e-35 | 132 |
| MsG0880043837.01.T01 | MTR_7g060020 | 40.828 | 169 | 83 | 4 | 28 | 187 | 25 | 185 | 1.87e-35 | 132 |
| MsG0880043837.01.T01 | MTR_0182s0060 | 34.432 | 273 | 134 | 10 | 9 | 241 | 7 | 274 | 8.61e-35 | 131 |
| MsG0880043837.01.T01 | MTR_7g060370 | 38.342 | 193 | 93 | 6 | 7 | 187 | 5 | 183 | 2.12e-34 | 129 |
| MsG0880043837.01.T01 | MTR_7g059540 | 38.776 | 196 | 92 | 6 | 7 | 188 | 5 | 186 | 3.59e-33 | 126 |
| MsG0880043837.01.T01 | MTR_7g059540 | 38.776 | 196 | 92 | 6 | 7 | 188 | 6 | 187 | 3.78e-33 | 126 |
| MsG0880043837.01.T01 | MTR_7g060260 | 38.542 | 192 | 96 | 6 | 6 | 188 | 5 | 183 | 8.90e-32 | 122 |
| MsG0880043837.01.T01 | MTR_7g060840 | 37.824 | 193 | 96 | 6 | 7 | 187 | 5 | 185 | 9.03e-32 | 122 |
| MsG0880043837.01.T01 | MTR_7g059480 | 39.759 | 166 | 82 | 5 | 32 | 187 | 25 | 182 | 1.20e-31 | 123 |
| MsG0880043837.01.T01 | MTR_7g060330 | 33.471 | 242 | 121 | 9 | 30 | 246 | 28 | 254 | 2.07e-29 | 116 |
| MsG0880043837.01.T01 | MTR_7g060220 | 33.906 | 233 | 115 | 7 | 28 | 235 | 21 | 239 | 2.21e-29 | 115 |
| MsG0880043837.01.T01 | MTR_7g060060 | 39.716 | 141 | 68 | 4 | 56 | 187 | 1 | 133 | 1.06e-24 | 98.6 |
| MsG0880043837.01.T01 | MTR_7g060160 | 30.833 | 240 | 118 | 7 | 6 | 235 | 4 | 205 | 1.15e-23 | 99.4 |
| MsG0880043837.01.T01 | MTR_1g048070 | 32.973 | 185 | 86 | 5 | 6 | 183 | 4 | 157 | 3.48e-22 | 92.4 |
| MsG0880043837.01.T01 | MTR_7g059510 | 35.484 | 155 | 61 | 3 | 23 | 177 | 20 | 135 | 1.14e-19 | 88.2 |
| MsG0880043837.01.T01 | MTR_7g059475 | 36.036 | 111 | 62 | 2 | 86 | 187 | 2 | 112 | 2.20e-15 | 74.3 |
| MsG0880043837.01.T01 | MTR_7g060200 | 35.455 | 110 | 52 | 4 | 77 | 177 | 1 | 100 | 7.29e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTCTTTGATACACTTTA+TGG | 0.141064 | 8:+31442068 | MsG0880043837.01.T01:CDS |
| CATTACAATCATCTTGATTT+AGG | 0.149428 | 8:-31442413 | None:intergenic |
| TTAGAAACCCTTTGAATCTT+AGG | 0.176823 | 8:-31441751 | None:intergenic |
| TCAATATTTGTTGAAGAATA+TGG | 0.271682 | 8:+31441895 | MsG0880043837.01.T01:CDS |
| TAGATACCATTATGGATAAA+AGG | 0.284378 | 8:+31441671 | MsG0880043837.01.T01:CDS |
| ACTTTACTTGACATCCAATA+TGG | 0.289356 | 8:+31442344 | MsG0880043837.01.T01:CDS |
| TCCTTCATTGATGTCCATAT+TGG | 0.304215 | 8:-31442358 | None:intergenic |
| TAACAAAGCATGTAAACTTT+TGG | 0.305190 | 8:+31441939 | MsG0880043837.01.T01:CDS |
| TGGACTTGAGATATTGTTAT+AGG | 0.306408 | 8:+31442226 | MsG0880043837.01.T01:CDS |
| GCATCAATTGGTCATACTTA+AGG | 0.314903 | 8:-31442125 | None:intergenic |
| GGACCAAATGATATAATCTT+AGG | 0.321680 | 8:-31441814 | None:intergenic |
| AACGGTAAAGATTGTTCAAA+TGG | 0.332688 | 8:-31442297 | None:intergenic |
| TTATAGGAATTATCTCAGTA+TGG | 0.369917 | 8:+31442242 | MsG0880043837.01.T01:CDS |
| GAGAGCATTACAAGCTACTA+TGG | 0.406521 | 8:+31441869 | MsG0880043837.01.T01:CDS |
| CTCTAAACATATGCATCAAT+TGG | 0.416193 | 8:-31442137 | None:intergenic |
| TACTTAAGGTTTAGTGTTTG+AGG | 0.419939 | 8:-31442111 | None:intergenic |
| GTTTAGAGATGCTATGTTGT+TGG | 0.424654 | 8:+31442152 | MsG0880043837.01.T01:CDS |
| AGAGAAACTAGATACCATTA+TGG | 0.426934 | 8:+31441663 | MsG0880043837.01.T01:CDS |
| ACACCTAAGATTATATCATT+TGG | 0.427896 | 8:+31441811 | MsG0880043837.01.T01:CDS |
| TGAAGGAAATGAACACAATC+AGG | 0.460743 | 8:+31442374 | MsG0880043837.01.T01:CDS |
| TTTCAATTCCTAAGATTCAA+AGG | 0.467119 | 8:+31441743 | MsG0880043837.01.T01:CDS |
| ACAATAATAATGATATTGCT+TGG | 0.471525 | 8:+31442028 | MsG0880043837.01.T01:CDS |
| TTCAATTCCTAAGATTCAAA+GGG | 0.485063 | 8:+31441744 | MsG0880043837.01.T01:CDS |
| GGTATCTAGTTTCTCTGCCA+TGG | 0.488995 | 8:-31441656 | None:intergenic |
| TTCACTGAGGATGCAATTGA+AGG | 0.489786 | 8:+31442003 | MsG0880043837.01.T01:CDS |
| TCCAATATGGACATCAATGA+AGG | 0.500777 | 8:+31442357 | MsG0880043837.01.T01:CDS |
| AATAATAAAAGTCTGAAAGA+AGG | 0.509557 | 8:+31441847 | MsG0880043837.01.T01:CDS |
| ACGGTAAAGATTGTTCAAAT+GGG | 0.525435 | 8:-31442296 | None:intergenic |
| AAGGATTTCCCAACTGAAAG+AGG | 0.526037 | 8:+31441690 | MsG0880043837.01.T01:CDS |
| GGTTTAGTGTTTGAGGACAT+TGG | 0.535592 | 8:-31442104 | None:intergenic |
| GGAGATTATATGCAAAGAGA+AGG | 0.536800 | 8:+31442200 | MsG0880043837.01.T01:CDS |
| TCAACTTCCAAGGAAAATGT+TGG | 0.538503 | 8:+31442179 | MsG0880043837.01.T01:CDS |
| TATAGGAATTATCTCAGTAT+GGG | 0.556465 | 8:+31442243 | MsG0880043837.01.T01:CDS |
| TGTTGGAGAATCAACTTCCA+AGG | 0.560053 | 8:+31442169 | MsG0880043837.01.T01:CDS |
| GAGATTATATGCAAAGAGAA+GGG | 0.579002 | 8:+31442201 | MsG0880043837.01.T01:CDS |
| GGAAATGAACACAATCAGGT+GGG | 0.585303 | 8:+31442378 | MsG0880043837.01.T01:CDS |
| ACTGAATCAAGTATACGAAA+CGG | 0.604678 | 8:-31442315 | None:intergenic |
| ATGGGTGAATGCAAACGACA+TGG | 0.614443 | 8:+31442261 | MsG0880043837.01.T01:CDS |
| AGGAAATGAACACAATCAGG+TGG | 0.629310 | 8:+31442377 | MsG0880043837.01.T01:CDS |
| GAAATGAACACAATCAGGTG+GGG | 0.647588 | 8:+31442379 | MsG0880043837.01.T01:CDS |
| AACTGAAAGAGGCAAAACAA+AGG | 0.653451 | 8:+31441701 | MsG0880043837.01.T01:CDS |
| TATATGCAAAGAGAAGGGTG+TGG | 0.675111 | 8:+31442206 | MsG0880043837.01.T01:CDS |
| TTTGAAGAATATGTTCACTG+AGG | 0.714146 | 8:+31441990 | MsG0880043837.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAAAAGTCTGAAAGA+AGG | + | Chr8:31441847-31441866 | MsG0880043837.01.T01:CDS | 20.0% |
| !! | ACAATAATAATGATATTGCT+TGG | + | Chr8:31442028-31442047 | MsG0880043837.01.T01:CDS | 20.0% |
| !!! | CTTTTATTATTGTGATGAAT+AGG | - | Chr8:31441838-31441857 | None:intergenic | 20.0% |
| !!! | TCAATATTTGTTGAAGAATA+TGG | + | Chr8:31441895-31441914 | MsG0880043837.01.T01:CDS | 20.0% |
| ! | ACACCTAAGATTATATCATT+TGG | + | Chr8:31441811-31441830 | MsG0880043837.01.T01:CDS | 25.0% |
| ! | ATGTTCTTTGATACACTTTA+TGG | + | Chr8:31442068-31442087 | MsG0880043837.01.T01:CDS | 25.0% |
| ! | CATTACAATCATCTTGATTT+AGG | - | Chr8:31442416-31442435 | None:intergenic | 25.0% |
| ! | TAGATACCATTATGGATAAA+AGG | + | Chr8:31441671-31441690 | MsG0880043837.01.T01:CDS | 25.0% |
| ! | TATAGGAATTATCTCAGTAT+GGG | + | Chr8:31442243-31442262 | MsG0880043837.01.T01:CDS | 25.0% |
| ! | TTATAGGAATTATCTCAGTA+TGG | + | Chr8:31442242-31442261 | MsG0880043837.01.T01:CDS | 25.0% |
| ! | TTCAATTCCTAAGATTCAAA+GGG | + | Chr8:31441744-31441763 | MsG0880043837.01.T01:CDS | 25.0% |
| ! | TTTCAATTCCTAAGATTCAA+AGG | + | Chr8:31441743-31441762 | MsG0880043837.01.T01:CDS | 25.0% |
| !! | TAACAAAGCATGTAAACTTT+TGG | + | Chr8:31441939-31441958 | MsG0880043837.01.T01:CDS | 25.0% |
| !!! | ATGACGAGCTAAATTTTAAT+TGG | + | Chr8:31442433-31442452 | MsG0880043837.01.T01:CDS | 25.0% |
| AACGGTAAAGATTGTTCAAA+TGG | - | Chr8:31442300-31442319 | None:intergenic | 30.0% | |
| ACGGTAAAGATTGTTCAAAT+GGG | - | Chr8:31442299-31442318 | None:intergenic | 30.0% | |
| ACTGAATCAAGTATACGAAA+CGG | - | Chr8:31442318-31442337 | None:intergenic | 30.0% | |
| ACTTTACTTGACATCCAATA+TGG | + | Chr8:31442344-31442363 | MsG0880043837.01.T01:CDS | 30.0% | |
| AGAGAAACTAGATACCATTA+TGG | + | Chr8:31441663-31441682 | MsG0880043837.01.T01:CDS | 30.0% | |
| CTCTAAACATATGCATCAAT+TGG | - | Chr8:31442140-31442159 | None:intergenic | 30.0% | |
| GAGATTATATGCAAAGAGAA+GGG | + | Chr8:31442201-31442220 | MsG0880043837.01.T01:CDS | 30.0% | |
| GGACCAAATGATATAATCTT+AGG | - | Chr8:31441817-31441836 | None:intergenic | 30.0% | |
| TACTTAAGGTTTAGTGTTTG+AGG | - | Chr8:31442114-31442133 | None:intergenic | 30.0% | |
| TGGACTTGAGATATTGTTAT+AGG | + | Chr8:31442226-31442245 | MsG0880043837.01.T01:CDS | 30.0% | |
| TTAGAAACCCTTTGAATCTT+AGG | - | Chr8:31441754-31441773 | None:intergenic | 30.0% | |
| TTTGAAGAATATGTTCACTG+AGG | + | Chr8:31441990-31442009 | MsG0880043837.01.T01:CDS | 30.0% | |
| ! | ACTTTTTGCGACAAAATGAA+AGG | + | Chr8:31441773-31441792 | MsG0880043837.01.T01:CDS | 30.0% |
| ! | ATAATCTCCAACATTTTCCT+TGG | - | Chr8:31442189-31442208 | None:intergenic | 30.0% |
| ! | GGAAATCCTTTTATCCATAA+TGG | - | Chr8:31441680-31441699 | None:intergenic | 30.0% |
| !! | TATTGCTTGGATTTTGTTTG+TGG | + | Chr8:31442041-31442060 | MsG0880043837.01.T01:CDS | 30.0% |
| AACTGAAAGAGGCAAAACAA+AGG | + | Chr8:31441701-31441720 | MsG0880043837.01.T01:CDS | 35.0% | |
| GCATCAATTGGTCATACTTA+AGG | - | Chr8:31442128-31442147 | None:intergenic | 35.0% | |
| GGAGATTATATGCAAAGAGA+AGG | + | Chr8:31442200-31442219 | MsG0880043837.01.T01:CDS | 35.0% | |
| GTTTAGAGATGCTATGTTGT+TGG | + | Chr8:31442152-31442171 | MsG0880043837.01.T01:CDS | 35.0% | |
| TCAACTTCCAAGGAAAATGT+TGG | + | Chr8:31442179-31442198 | MsG0880043837.01.T01:CDS | 35.0% | |
| TCCAATATGGACATCAATGA+AGG | + | Chr8:31442357-31442376 | MsG0880043837.01.T01:CDS | 35.0% | |
| TCCTTCATTGATGTCCATAT+TGG | - | Chr8:31442361-31442380 | None:intergenic | 35.0% | |
| TGAAGGAAATGAACACAATC+AGG | + | Chr8:31442374-31442393 | MsG0880043837.01.T01:CDS | 35.0% | |
| !! | TTGTTTTGCCTCTTTCAGTT+GGG | - | Chr8:31441701-31441720 | None:intergenic | 35.0% |
| !!! | TTTGTTTTGCCTCTTTCAGT+TGG | - | Chr8:31441702-31441721 | None:intergenic | 35.0% |
| AAGGATTTCCCAACTGAAAG+AGG | + | Chr8:31441690-31441709 | MsG0880043837.01.T01:CDS | 40.0% | |
| AGGAAATGAACACAATCAGG+TGG | + | Chr8:31442377-31442396 | MsG0880043837.01.T01:CDS | 40.0% | |
| GAAATGAACACAATCAGGTG+GGG | + | Chr8:31442379-31442398 | MsG0880043837.01.T01:CDS | 40.0% | |
| GGAAATGAACACAATCAGGT+GGG | + | Chr8:31442378-31442397 | MsG0880043837.01.T01:CDS | 40.0% | |
| GGTTTAGTGTTTGAGGACAT+TGG | - | Chr8:31442107-31442126 | None:intergenic | 40.0% | |
| TATATGCAAAGAGAAGGGTG+TGG | + | Chr8:31442206-31442225 | MsG0880043837.01.T01:CDS | 40.0% | |
| TGTTGGAGAATCAACTTCCA+AGG | + | Chr8:31442169-31442188 | MsG0880043837.01.T01:CDS | 40.0% | |
| TTCACTGAGGATGCAATTGA+AGG | + | Chr8:31442003-31442022 | MsG0880043837.01.T01:CDS | 40.0% | |
| !! | GAGAGCATTACAAGCTACTA+TGG | + | Chr8:31441869-31441888 | MsG0880043837.01.T01:CDS | 40.0% |
| !! | GCTTGGATTTTGTTTGTGGA+TGG | + | Chr8:31442045-31442064 | MsG0880043837.01.T01:CDS | 40.0% |
| ATGGGTGAATGCAAACGACA+TGG | + | Chr8:31442261-31442280 | MsG0880043837.01.T01:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 31441658 | 31442464 | 31441658 | ID=MsG0880043837.01;Name=MsG0880043837.01 |
| Chr8 | mRNA | 31441658 | 31442464 | 31441658 | ID=MsG0880043837.01.T01;Parent=MsG0880043837.01;Name=MsG0880043837.01.T01;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|268 |
| Chr8 | exon | 31441658 | 31442464 | 31441658 | ID=MsG0880043837.01.T01:exon:9453;Parent=MsG0880043837.01.T01 |
| Chr8 | CDS | 31441658 | 31442464 | 31441658 | ID=MsG0880043837.01.T01:cds;Parent=MsG0880043837.01.T01 |
| Chr8 | mRNA | 31441682 | 31442464 | 31441682 | ID=MsG0880043837.01.T02;Parent=MsG0880043837.01;Name=MsG0880043837.01.T02;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|0|1|0|260 |
| Chr8 | exon | 31441682 | 31442464 | 31441682 | ID=MsG0880043837.01.T02:exon:9454;Parent=MsG0880043837.01.T02 |
| Chr8 | CDS | 31441682 | 31442464 | 31441682 | ID=MsG0880043837.01.T02:cds;Parent=MsG0880043837.01.T02 |
| Gene Sequence |
| Protein sequence |
