AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005240.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005240.01.T01 MTR_1g095360 90.452 775 25 3 8 733 99 873 0.0 1426
MsG0180005240.01.T01 MTR_1g095360 86.065 775 24 4 8 733 99 838 0.0 1339
MsG0180005240.01.T01 MTR_3g070290 30.266 413 214 11 355 717 192 580 6.55e-44 167
MsG0180005240.01.T01 MTR_3g467000 30.266 413 214 12 355 717 191 579 1.28e-43 167
MsG0180005240.01.T01 MTR_3g076770 30.966 352 205 8 395 717 240 582 3.71e-41 159
MsG0180005240.01.T01 MTR_1g114520 29.551 423 219 11 353 729 156 545 2.34e-34 139
MsG0180005240.01.T01 MTR_7g011400 27.869 183 128 3 551 732 60 239 1.57e-13 71.6
MsG0180005240.01.T01 MTR_4g076520 27.083 192 135 5 532 722 360 547 9.47e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005240.01.T01 AT2G28880 68.537 499 156 1 235 732 414 912 0.0 705
MsG0180005240.01.T01 AT2G28880 78.519 135 29 0 14 148 110 244 5.96e-67 238
MsG0180005240.01.T01 AT2G29690 30.807 409 241 10 355 729 198 598 1.38e-45 173
MsG0180005240.01.T01 AT3G55870 30.446 404 230 11 353 717 74 465 7.17e-41 157
MsG0180005240.01.T01 AT3G55870 30.446 404 230 11 353 717 173 564 3.68e-40 156
MsG0180005240.01.T01 AT5G05730 29.833 419 232 12 343 717 173 573 4.56e-40 156
MsG0180005240.01.T01 AT5G05730 29.148 446 229 14 343 717 173 602 7.85e-39 153
MsG0180005240.01.T01 AT2G29690 29.747 316 196 10 355 653 198 504 2.15e-29 123
MsG0180005240.01.T01 AT3G55870 29.245 318 193 10 353 650 173 478 1.65e-25 111
MsG0180005240.01.T01 AT1G74710 29.167 192 129 5 532 721 363 549 2.49e-13 73.9
MsG0180005240.01.T01 AT1G74710 28.571 203 139 5 532 733 363 560 2.88e-13 73.6
MsG0180005240.01.T01 AT5G57890 37.500 136 73 6 18 150 98 224 3.09e-13 71.2
MsG0180005240.01.T01 AT1G18870 28.272 191 132 5 532 721 358 544 3.50e-13 73.2
MsG0180005240.01.T01 AT1G18870 28.272 191 132 5 532 721 308 494 3.78e-13 73.2
MsG0180005240.01.T01 AT1G24807 36.765 136 74 6 18 150 60 186 4.77e-13 70.1
MsG0180005240.01.T01 AT1G25155 36.765 136 74 6 18 150 47 173 5.28e-13 69.3
MsG0180005240.01.T01 AT1G25083 36.765 136 74 6 18 150 47 173 5.28e-13 69.3
MsG0180005240.01.T01 AT1G24909 36.765 136 74 6 18 150 47 173 5.28e-13 69.3
MsG0180005240.01.T01 AT1G25220 36.765 136 74 6 18 150 101 227 5.41e-13 70.5
MsG0180005240.01.T01 AT1G25220 36.765 136 74 6 18 150 114 240 5.54e-13 70.9

Find 181 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAATCGGTTTCCTTATC+TGG 0.083920 1:-89028505 None:intergenic
AAATGATGATGTTTATTTAT+TGG 0.138927 1:+89028244 MsG0180005240.01.T01:CDS
AATAGGACACTTCCATTTAT+TGG 0.140688 1:+89024686 MsG0180005240.01.T01:CDS
ATCTCTTCGTATTCGTCTTC+TGG 0.192553 1:-89029405 None:intergenic
CTAGAAATGCAGGGTTCTTA+TGG 0.254979 1:+89024828 MsG0180005240.01.T01:CDS
TTGCTATACCACCATTCTTT+TGG 0.255917 1:-89029669 None:intergenic
ATGCAGGGATATTCCTATTC+TGG 0.268177 1:+89022160 MsG0180005240.01.T01:CDS
GCTAGAAGCTAAGCCCATTA+AGG 0.273961 1:+89028670 MsG0180005240.01.T01:CDS
TTCTGTCAAAACAATATTCT+TGG 0.274266 1:+89026396 MsG0180005240.01.T01:CDS
ACGAGCTATAGTACCCTTAA+TGG 0.290221 1:-89028684 None:intergenic
CATGTGCTTGGCAGTAATTT+TGG 0.296569 1:+89029810 MsG0180005240.01.T01:three_prime_UTR
ATTTATTGGATCCGAGGTTT+TGG 0.298084 1:+89024700 MsG0180005240.01.T01:CDS
CTATTTGAAGTCCATGCTAT+TGG 0.298195 1:-89024668 None:intergenic
GACACTTCTTAACATCTCTA+AGG 0.313097 1:-89028436 None:intergenic
GAACTTCCGTTTCCTGCTTC+AGG 0.314406 1:-89024782 None:intergenic
ATACCTTCTGGTAGAAATTC+TGG 0.316634 1:+89023368 MsG0180005240.01.T01:CDS
TGATTCTCACCTATATCTTC+TGG 0.321594 1:-89021082 None:intergenic
AAAACCTCGGATCCAATAAA+TGG 0.325149 1:-89024698 None:intergenic
ATAGCAAAGATAAATTGTTT+TGG 0.326109 1:+89029685 MsG0180005240.01.T01:three_prime_UTR
CAGAATCTTCCAGTGATAAA+TGG 0.331158 1:-89026369 None:intergenic
AGTATATTCTGTCAGTTGTT+TGG 0.333061 1:+89025767 MsG0180005240.01.T01:CDS
CTTTGCATTCCTTCTGTAAA+GGG 0.338991 1:-89029643 None:intergenic
TCTCTTCGTATTCGTCTTCT+GGG 0.362497 1:-89029404 None:intergenic
GAGAAGCTTCTGAGCTTAAC+TGG 0.362909 1:+89028317 MsG0180005240.01.T01:CDS
ACAATGGGTTCTCATCTTCC+TGG 0.363667 1:+89029586 MsG0180005240.01.T01:three_prime_UTR
CAATAGCATGGACTTCAAAT+AGG 0.365417 1:+89024669 MsG0180005240.01.T01:CDS
AGTTCAAGCCTTGTTGACTA+TGG 0.367257 1:+89024800 MsG0180005240.01.T01:CDS
ACAAAACTTTGAAGTTGAAA+TGG 0.368700 1:+89025702 MsG0180005240.01.T01:CDS
ACAAATTACAATGAAATTGT+TGG 0.377422 1:-89029887 None:intergenic
TGTCTGACCATGGGCCAAAA+AGG 0.384744 1:-89029506 None:intergenic
TGGTAGAAATTCTGGTTTCA+AGG 0.385639 1:+89023376 MsG0180005240.01.T01:CDS
AGGAAGCTGAAAACACCTTT+TGG 0.386030 1:+89025792 MsG0180005240.01.T01:CDS
ATTGAGGTATTAAATTCTCT+TGG 0.386994 1:+89028521 MsG0180005240.01.T01:CDS
CTCAATCGGTTTCCTTATCT+GGG 0.387674 1:-89028504 None:intergenic
GCTATTGGAATGAGCACTTC+AGG 0.390822 1:-89024653 None:intergenic
TTCAAGTATTTCACAATGGT+TGG 0.390964 1:+89028283 MsG0180005240.01.T01:CDS
CCCTGAGAGGTTCCTGCAGT+TGG 0.400432 1:+89028634 MsG0180005240.01.T01:CDS
TAATCTATCACAGTGTTTGC+TGG 0.401931 1:-89029447 None:intergenic
TGTGTCAAAGCTGCATTTCC+TGG 0.402597 1:+89029177 MsG0180005240.01.T01:CDS
AGAGAATTTAATACCTCAAT+CGG 0.403042 1:-89028518 None:intergenic
TTTGGAAGCAGTTAACGTTC+AGG 0.409857 1:+89026125 MsG0180005240.01.T01:CDS
TAGAAATGCAGGGTTCTTAT+GGG 0.410054 1:+89024829 MsG0180005240.01.T01:CDS
TTCAAATATTGCGTGAATGC+AGG 0.416800 1:+89022144 MsG0180005240.01.T01:CDS
AGGAAATTTGATCACTTGGC+TGG 0.419221 1:+89025725 MsG0180005240.01.T01:CDS
TTTACCTACATTTAAGAGAA+AGG 0.420459 1:+89028546 MsG0180005240.01.T01:CDS
CCCGTGGTTTGATAGGCATT+GGG 0.423040 1:+89023107 MsG0180005240.01.T01:intron
CTAGAAGCTAAGCCCATTAA+GGG 0.423824 1:+89028671 MsG0180005240.01.T01:CDS
AATTGCCCCTCCAGCTCCTA+TGG 0.425604 1:-89029367 None:intergenic
TTTCCTGGTGGTTCGATGAC+AGG 0.425849 1:+89029192 MsG0180005240.01.T01:CDS
AGTTCCATTGATCTCAACTT+TGG 0.425932 1:-89029219 None:intergenic
TCCAACTGCAGGAACCTCTC+AGG 0.428773 1:-89028635 None:intergenic
TGGTTCTGTGAGGATGGATT+TGG 0.430243 1:+89028337 MsG0180005240.01.T01:CDS
TTCACATACAAAATTACAAT+GGG 0.435801 1:+89029571 MsG0180005240.01.T01:three_prime_UTR
GAAAATATAAAATGATTAGT+AGG 0.439931 1:-89029551 None:intergenic
CCTTTGCATTCCTTCTGTAA+AGG 0.440381 1:-89029644 None:intergenic
GACCAAGGTCATTTCTTAGA+AGG 0.440815 1:-89029032 None:intergenic
CCTATTCTGGGTGTTTGCCT+CGG 0.440882 1:+89022173 MsG0180005240.01.T01:CDS
CCGGCATGCCCAGAAGATAT+AGG 0.443381 1:+89021073 MsG0180005240.01.T01:CDS
TGCAGGGATATTCCTATTCT+GGG 0.444432 1:+89022161 MsG0180005240.01.T01:CDS
TACCTCAGACGCCCGTGAAC+TGG 0.444477 1:-89023167 None:intergenic
TTAGAAGGTCAACAATCATC+AGG 0.447823 1:-89029017 None:intergenic
GATTCCTTTCTCTTAAATGT+AGG 0.447911 1:-89028550 None:intergenic
CTTGGTCGTGTATGTGATCC+TGG 0.449044 1:+89029048 MsG0180005240.01.T01:CDS
TATAGTGATGGGAGTTCAAA+AGG 0.451018 1:+89026340 MsG0180005240.01.T01:intron
CGAGCTATAGTACCCTTAAT+GGG 0.451531 1:-89028683 None:intergenic
GATTCTCACCTATATCTTCT+GGG 0.451656 1:-89021081 None:intergenic
CAAATACACAGATCTTCCTT+TGG 0.452881 1:-89028602 None:intergenic
AAAATGATTAGTAGGACAAA+AGG 0.454064 1:-89029543 None:intergenic
GGCATCTACTCAGGCTGCAT+TGG 0.460246 1:+89029270 MsG0180005240.01.T01:CDS
ATCACCTGGACCTGGTTCTC+CGG 0.463700 1:+89021054 MsG0180005240.01.T01:CDS
TGACACCACATTCAACTTTG+AGG 0.465437 1:-89028145 None:intergenic
TGTTGACGTGCCGCATCTCA+TGG 0.470293 1:+89029074 MsG0180005240.01.T01:CDS
TGAATCACCACAGGAGGGAC+TGG 0.473424 1:-89020959 None:intergenic
TGCGGCACGTCAACAGATCC+AGG 0.484263 1:-89029066 None:intergenic
TATTTATTTATGCATGTGCT+TGG 0.484763 1:+89029798 MsG0180005240.01.T01:three_prime_UTR
CTTAACTGGTTCTGTGAGGA+TGG 0.485235 1:+89028331 MsG0180005240.01.T01:CDS
AAATTCAGCCAAGCCGCATA+AGG 0.485476 1:-89028578 None:intergenic
AGCCAAGCCGCATAAGGTGC+TGG 0.493373 1:-89028572 None:intergenic
TCAAATTGAAATTACAGCTC+AGG 0.495889 1:+89028735 MsG0180005240.01.T01:CDS
CCGAGGCAAACACCCAGAAT+AGG 0.495918 1:-89022173 None:intergenic
GTGTGCTTACAAGCTTGATT+TGG 0.495951 1:+89029758 MsG0180005240.01.T01:three_prime_UTR
TCTGGGCATGCCGGAGAACC+AGG 0.496218 1:-89021064 None:intergenic
CACTTGGCTGGGCAAGTTGG+TGG 0.497533 1:+89025737 MsG0180005240.01.T01:CDS
CGCACCAAAGTTGAGATCAA+TGG 0.499946 1:+89029215 MsG0180005240.01.T01:CDS
GCTTCAGTCATAACATATCC+AGG 0.500944 1:-89029604 None:intergenic
CCTATATCTTCTGGGCATGC+CGG 0.500977 1:-89021073 None:intergenic
TCAATCATATCGTTATGATA+AGG 0.501529 1:+89027207 MsG0180005240.01.T01:CDS
CATTCTACAAGGCCACACTA+TGG 0.502130 1:+89024859 MsG0180005240.01.T01:CDS
TATGGACAAACTAGAAATGC+AGG 0.503301 1:+89024818 MsG0180005240.01.T01:CDS
CATGCCGGAGAACCAGGTCC+AGG 0.506647 1:-89021058 None:intergenic
GGGTGTTTGCCTCGGACACC+AGG 0.507562 1:+89022181 MsG0180005240.01.T01:CDS
ATTCTGTCAGTTGTTTGGAC+AGG 0.509319 1:+89025772 MsG0180005240.01.T01:CDS
AGAGGTTCCTGCAGTTGGAT+AGG 0.511649 1:+89028639 MsG0180005240.01.T01:CDS
ATCCAGCACCTTATGCGGCT+TGG 0.512005 1:+89028570 MsG0180005240.01.T01:CDS
GGAAATTTGATCACTTGGCT+GGG 0.513958 1:+89025726 MsG0180005240.01.T01:CDS
ATGGAGGAAATTTGATCACT+TGG 0.515760 1:+89025721 MsG0180005240.01.T01:CDS
TATCCGCCGTGAAAATCAAA+TGG 0.517625 1:-89027247 None:intergenic
TGGTGATTCAAAATGATGAT+TGG 0.526558 1:+89020972 MsG0180005240.01.T01:CDS
GGTGAAGCTTCCATAGGAGC+TGG 0.526688 1:+89029357 MsG0180005240.01.T01:CDS
GCGGATATGTTGGTTACATC+GGG 0.526889 1:+89027263 MsG0180005240.01.T01:CDS
GTCAAAACAATATTCTTGGA+AGG 0.539340 1:+89026400 MsG0180005240.01.T01:CDS
GGATAGTTCTTCCACAGAGA+TGG 0.539959 1:+89025817 MsG0180005240.01.T01:CDS
TCAAATATTGCGTGAATGCA+GGG 0.540876 1:+89022145 MsG0180005240.01.T01:CDS
AAATCATTGTTGTCTGACCA+TGG 0.543050 1:-89029516 None:intergenic
GAGGAAAAGGTGGATCACTT+TGG 0.543864 1:+89026107 MsG0180005240.01.T01:CDS
GATCACTTGGCTGGGCAAGT+TGG 0.544459 1:+89025734 MsG0180005240.01.T01:CDS
CGTGAACTGGTTCAGATGCA+TGG 0.546538 1:-89023154 None:intergenic
CATGCATCTGAACCAGTTCA+CGG 0.547761 1:+89023155 MsG0180005240.01.T01:CDS
TGTCTAAACTATATTAGAGA+TGG 0.549780 1:+89028455 MsG0180005240.01.T01:CDS
GGAAGAACTATCCAACCAAA+AGG 0.553464 1:-89025807 None:intergenic
ATGCATCTGAACCAGTTCAC+GGG 0.555574 1:+89023156 MsG0180005240.01.T01:CDS
TGTGCCTCACAACCCAGATA+AGG 0.555986 1:+89028492 MsG0180005240.01.T01:CDS
CCAACTGCAGGAACCTCTCA+GGG 0.556382 1:-89028634 None:intergenic
AAAACAATATTCTTGGAAGG+AGG 0.557570 1:+89026403 MsG0180005240.01.T01:CDS
CAACAGTTGCCCTTTACAGA+AGG 0.558369 1:+89029634 MsG0180005240.01.T01:three_prime_UTR
GGCGGATATGTTGGTTACAT+CGG 0.559365 1:+89027262 MsG0180005240.01.T01:CDS
CGTTCAGGTTGTCTGATCAG+AGG 0.561324 1:+89026140 MsG0180005240.01.T01:CDS
AGGTGGTGGCCATTTATCAC+TGG 0.563009 1:+89026360 MsG0180005240.01.T01:CDS
CTGTGAGGATGGATTTGGAA+AGG 0.565191 1:+89028342 MsG0180005240.01.T01:CDS
TGTTCTCGAGGCATCTACTC+AGG 0.566022 1:+89029261 MsG0180005240.01.T01:CDS
GCAGTGAAGTTGAGCACAAT+GGG 0.566135 1:+89023327 MsG0180005240.01.T01:intron
TCGTTCATGGGAGGAAAAGG+TGG 0.567570 1:+89026097 MsG0180005240.01.T01:CDS
CCAGATAAGGAAACCGATTG+AGG 0.569130 1:+89028505 MsG0180005240.01.T01:CDS
TTTCACATACAAAATTACAA+TGG 0.569237 1:+89029570 MsG0180005240.01.T01:three_prime_UTR
AAACCAGAATTTCTACCAGA+AGG 0.570639 1:-89023371 None:intergenic
ATGCAAAGGATCCAAAAGAA+TGG 0.571088 1:+89029658 MsG0180005240.01.T01:three_prime_UTR
AACCAGTTCACGGGCGTCTG+AGG 0.571689 1:+89023165 MsG0180005240.01.T01:CDS
AAGTGCTCATTCCAATAGCA+TGG 0.571695 1:+89024657 MsG0180005240.01.T01:CDS
TCTCTTGAAAGTTGTTCTCG+AGG 0.572344 1:+89029249 MsG0180005240.01.T01:CDS
TATGATAAGGATGAATATGA+AGG 0.576693 1:+89027220 MsG0180005240.01.T01:CDS
AAACTTTGAAGTTGAAATGG+AGG 0.579267 1:+89025705 MsG0180005240.01.T01:CDS
AGCTTCCATAGGAGCTGGAG+GGG 0.583104 1:+89029362 MsG0180005240.01.T01:CDS
GCGCCTGTCATCGAACCACC+AGG 0.583166 1:-89029195 None:intergenic
TTTGCTGTTCTTCCCCTGAG+AGG 0.583316 1:+89028621 MsG0180005240.01.T01:CDS
AATCATTGTTGTCTGACCAT+GGG 0.587849 1:-89029515 None:intergenic
TATCACTCCTATCCAACTGC+AGG 0.588529 1:-89028646 None:intergenic
GGTGGTTCGATATCATTCGC+TGG 0.593671 1:+89024610 MsG0180005240.01.T01:intron
ACTTCCATTTATTGGATCCG+AGG 0.593929 1:+89024694 MsG0180005240.01.T01:CDS
TTATCACTGGAAGATTCTGA+AGG 0.594083 1:+89026373 MsG0180005240.01.T01:CDS
AAGAACAGTTGTTATACATG+AGG 0.596678 1:+89029335 MsG0180005240.01.T01:CDS
GTTTCCTTATCTGGGTTGTG+AGG 0.596872 1:-89028496 None:intergenic
TTCAAAATGATGATTGGACG+TGG 0.599788 1:+89020978 MsG0180005240.01.T01:CDS
TAGTTTGTCCATAGTCAACA+AGG 0.602079 1:-89024808 None:intergenic
TAGGCATTGGGTTATGTGCA+TGG 0.603761 1:+89023119 MsG0180005240.01.T01:intron
AGCTCGTGGTGCTACTGAGG+AGG 0.604636 1:+89028700 MsG0180005240.01.T01:CDS
GATGGGAGTTCAAAAGGTGG+TGG 0.606255 1:+89026346 MsG0180005240.01.T01:CDS
GACCTTCTAAGAAATGACCT+TGG 0.607144 1:+89029030 MsG0180005240.01.T01:CDS
CATGAGGGTGAAGCTTCCAT+AGG 0.610810 1:+89029351 MsG0180005240.01.T01:CDS
AGTGATGGGAGTTCAAAAGG+TGG 0.612943 1:+89026343 MsG0180005240.01.T01:intron
CAATGGTGAGTACAATTCGT+GGG 0.615391 1:+89029124 MsG0180005240.01.T01:CDS
ACAATGGTGAGTACAATTCG+TGG 0.620395 1:+89029123 MsG0180005240.01.T01:CDS
GATAACATCGTATTATCACC+TGG 0.621106 1:+89021040 MsG0180005240.01.T01:CDS
AAAGTTCAAGTATTTCACAA+TGG 0.623372 1:+89028279 MsG0180005240.01.T01:CDS
TATAGCTCGTGGTGCTACTG+AGG 0.623391 1:+89028697 MsG0180005240.01.T01:CDS
GAAGCTTCCATAGGAGCTGG+AGG 0.628682 1:+89029360 MsG0180005240.01.T01:CDS
GTCAAAGCTGCATTTCCTGG+TGG 0.629738 1:+89029180 MsG0180005240.01.T01:CDS
AGAACAGTTGTTATACATGA+GGG 0.631663 1:+89029336 MsG0180005240.01.T01:CDS
AAGGAATCCAGCACCTTATG+CGG 0.632251 1:+89028565 MsG0180005240.01.T01:CDS
AGGGAAATACCTGGTGTCCG+AGG 0.634630 1:-89022190 None:intergenic
CAAAGGATCCAAAAGAATGG+TGG 0.638306 1:+89029661 MsG0180005240.01.T01:three_prime_UTR
AAGCTTCCATAGGAGCTGGA+GGG 0.638739 1:+89029361 MsG0180005240.01.T01:CDS
TGGGAGTCAAGCATTCTACA+AGG 0.640874 1:+89024848 MsG0180005240.01.T01:CDS
AACACCTGCACACCATAGTG+TGG 0.641639 1:-89024871 None:intergenic
ACAATGGTTGGATGATACTG+AGG 0.643513 1:+89028295 MsG0180005240.01.T01:CDS
TTTCAGTGAAAAGGATCAGG+CGG 0.648387 1:+89028990 MsG0180005240.01.T01:intron
ATCGTATTATCACCTGGACC+TGG 0.649380 1:+89021046 MsG0180005240.01.T01:CDS
CCTTTACAGAAGGAATGCAA+AGG 0.651964 1:+89029644 MsG0180005240.01.T01:three_prime_UTR
ATTGTACTTGTCCAAAACCT+CGG 0.653172 1:-89024711 None:intergenic
TGCAGTGAAGTTGAGCACAA+TGG 0.654882 1:+89023326 MsG0180005240.01.T01:intron
TGAGCTTAACTGGTTCTGTG+AGG 0.664892 1:+89028327 MsG0180005240.01.T01:CDS
ATATGCAACTGTTCACACAA+TGG 0.665606 1:+89029107 MsG0180005240.01.T01:CDS
ATTAAGGGTACTATAGCTCG+TGG 0.669637 1:+89028686 MsG0180005240.01.T01:CDS
GATTGTACTTCCATGAGATG+CGG 0.673089 1:-89029084 None:intergenic
TCATATAGATACCATCTCTG+TGG 0.674627 1:-89025828 None:intergenic
TGCGAAACCAGCCTTATGTG+AGG 0.675505 1:-89028390 None:intergenic
ATGGACAAACTAGAAATGCA+GGG 0.679222 1:+89024819 MsG0180005240.01.T01:CDS
TTTAGTACATAATAATACTG+AGG 0.714422 1:+89025673 MsG0180005240.01.T01:CDS
CAACTGCAGGAACCTCTCAG+GGG 0.714797 1:-89028633 None:intergenic
CAGGATCACATACACGACCA+AGG 0.715599 1:-89029047 None:intergenic
TATGACCTCAAAGTTGAATG+TGG 0.722703 1:+89028140 MsG0180005240.01.T01:CDS
TCAAAATGATGATTGGACGT+GGG 0.727524 1:+89020979 MsG0180005240.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAATAATTTATGTATT+TGG + Chr1:89025219-89025238 MsG0180005240.01.T01:intron 10.0%
!! AAACAAAAAATTTAAGTCAA+AGG - Chr1:89022802-89022821 None:intergenic 15.0%
!! AAACATAAAACTCATTTATA+TGG + Chr1:89022701-89022720 MsG0180005240.01.T01:intron 15.0%
!! AACAAAAAATTTAAGTCAAA+GGG - Chr1:89022801-89022820 None:intergenic 15.0%
!! AACATAAAACTCATTTATAT+GGG + Chr1:89022702-89022721 MsG0180005240.01.T01:intron 15.0%
!! AGTTAAAACTATAAATGAAA+GGG - Chr1:89023292-89023311 None:intergenic 15.0%
!! CTTGTAAGAAATATAAAATT+AGG - Chr1:89021851-89021870 None:intergenic 15.0%
!! GAAAATATAAAATGATTAGT+AGG - Chr1:89029554-89029573 None:intergenic 15.0%
!! GTATTATGTTTGTATTTAAA+AGG - Chr1:89022503-89022522 None:intergenic 15.0%
!! TAAAATCATTTGAAGAAAAA+AGG - Chr1:89022105-89022124 None:intergenic 15.0%
!! TAATATTAAAAATTGGATTG+TGG - Chr1:89022941-89022960 None:intergenic 15.0%
!! TAGTTAAAACTATAAATGAA+AGG - Chr1:89023293-89023312 None:intergenic 15.0%
!! TTTAATACAATTTATGAAGA+TGG + Chr1:89022465-89022484 MsG0180005240.01.T01:intron 15.0%
!!! AAATGATGATGTTTATTTAT+TGG + Chr1:89028244-89028263 MsG0180005240.01.T01:CDS 15.0%
!!! AATAAAAAAAGTATCGTAAT+TGG - Chr1:89027094-89027113 None:intergenic 15.0%
!!! ATAAAAAAAGTATCGTAATT+GGG - Chr1:89027093-89027112 None:intergenic 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG + Chr1:89025225-89025244 MsG0180005240.01.T01:intron 15.0%
!!! ATTTTGTTTGGATAAATTTT+AGG - Chr1:89024332-89024351 None:intergenic 15.0%
!!! GTTTTATTACAAATTTCAAT+TGG + Chr1:89025553-89025572 MsG0180005240.01.T01:intron 15.0%
!!! TATTTGATAATTCAGTAATT+TGG + Chr1:89028887-89028906 MsG0180005240.01.T01:intron 15.0%
!!! TCGAACATTTTTAAAAAATT+TGG + Chr1:89023442-89023461 MsG0180005240.01.T01:intron 15.0%
!!! TGTTAAAAAAATAGTTTTTG+AGG - Chr1:89021618-89021637 None:intergenic 15.0%
!!! TTTTGTTTGGATAAATTTTA+GGG - Chr1:89024331-89024350 None:intergenic 15.0%
!! AAAACATTCAAAGTAATACA+TGG - Chr1:89026901-89026920 None:intergenic 20.0%
!! AAATCCGAAAAAATTACATA+TGG + Chr1:89024411-89024430 MsG0180005240.01.T01:intron 20.0%
!! AAATTATTTGATAAGCACAT+AGG - Chr1:89025347-89025366 None:intergenic 20.0%
!! ACAAAACTTAAACAATAGTT+AGG - Chr1:89023054-89023073 None:intergenic 20.0%
!! ACAAATTACAATGAAATTGT+TGG - Chr1:89029890-89029909 None:intergenic 20.0%
!! ACACAATTTGCAAAATTAAA+AGG - Chr1:89022324-89022343 None:intergenic 20.0%
!! ACATAAAACTCATTTATATG+GGG + Chr1:89022703-89022722 MsG0180005240.01.T01:intron 20.0%
!! ACTGAATTATCAAATATACT+TGG - Chr1:89028883-89028902 None:intergenic 20.0%
!! ATCTAATTTCTATTGTTACT+TGG + Chr1:89026741-89026760 MsG0180005240.01.T01:intron 20.0%
!! ATTCAATGTAAGCATTTATT+TGG - Chr1:89027305-89027324 None:intergenic 20.0%
!! ATTTATACCGAAATAATTTG+TGG + Chr1:89025363-89025382 MsG0180005240.01.T01:intron 20.0%
!! CAAACAATTATTATGATTAG+TGG - Chr1:89024578-89024597 None:intergenic 20.0%
!! CAAATTCTTCAAAATATATG+AGG - Chr1:89022008-89022027 None:intergenic 20.0%
!! GAAATACATACTATAGTAAA+GGG - Chr1:89024371-89024390 None:intergenic 20.0%
!! GAACGAAAAAATAATGTATT+AGG - Chr1:89024009-89024028 None:intergenic 20.0%
!! GTTAAAACTATAAATGAAAG+GGG - Chr1:89023291-89023310 None:intergenic 20.0%
!! TAAAATTTGAATTGATCAAG+AGG - Chr1:89024281-89024300 None:intergenic 20.0%
!! TGAAATACATACTATAGTAA+AGG - Chr1:89024372-89024391 None:intergenic 20.0%
!! TTAAACATCATAATTCACAA+TGG - Chr1:89021296-89021315 None:intergenic 20.0%
!! TTAAATTGTATTGGGAAAAA+GGG - Chr1:89022236-89022255 None:intergenic 20.0%
!! TTAACTCATATGATCAAATT+TGG + Chr1:89021438-89021457 MsG0180005240.01.T01:intron 20.0%
!! TTCACATACAAAATTACAAT+GGG + Chr1:89029571-89029590 MsG0180005240.01.T01:three_prime_UTR 20.0%
!! TTTAGTACATAATAATACTG+AGG + Chr1:89025673-89025692 MsG0180005240.01.T01:CDS 20.0%
!! TTTCACATACAAAATTACAA+TGG + Chr1:89029570-89029589 MsG0180005240.01.T01:three_prime_UTR 20.0%
!!! AAACCATTTTCTCATTTATA+AGG - Chr1:89025419-89025438 None:intergenic 20.0%
!!! AATTTTTTGTTTCTTTGAGA+AGG + Chr1:89022810-89022829 MsG0180005240.01.T01:intron 20.0%
!!! ACAATTTTGAATAAAGAAGA+GGG - Chr1:89022212-89022231 None:intergenic 20.0%
!!! ACCATTAATTTTTTCCTTTT+TGG + Chr1:89029492-89029511 MsG0180005240.01.T01:three_prime_UTR 20.0%
!!! ATAGCAAAGATAAATTGTTT+TGG + Chr1:89029685-89029704 MsG0180005240.01.T01:three_prime_UTR 20.0%
!!! ATTTCATTGTAATTTGTGTT+TGG + Chr1:89029893-89029912 MsG0180005240.01.T01:three_prime_UTR 20.0%
!!! CTTAATAGTTCATTTTTCTT+TGG + Chr1:89022428-89022447 MsG0180005240.01.T01:intron 20.0%
!!! CTTCCAAATATGTTTTTATT+GGG - Chr1:89022677-89022696 None:intergenic 20.0%
!!! GATACACATATTTTTACATT+TGG + Chr1:89025950-89025969 MsG0180005240.01.T01:intron 20.0%
!!! TACAATTTTGAATAAAGAAG+AGG - Chr1:89022213-89022232 None:intergenic 20.0%
!!! TACAGAAAAGATATTTTGTT+TGG - Chr1:89024344-89024363 None:intergenic 20.0%
!!! TAGCAAAGATAAATTGTTTT+GGG + Chr1:89029686-89029705 MsG0180005240.01.T01:three_prime_UTR 20.0%
!!! TCTACTTTTTTAGAAGATTA+CGG + Chr1:89022295-89022314 MsG0180005240.01.T01:intron 20.0%
!!! TGTACATTTAATTTTTTCCT+TGG + Chr1:89023073-89023092 MsG0180005240.01.T01:intron 20.0%
!!! TTTATACCGAAATAATTTGT+GGG + Chr1:89025364-89025383 MsG0180005240.01.T01:intron 20.0%
!!! TTTTCTTGATTATTTGAACA+AGG + Chr1:89026426-89026445 MsG0180005240.01.T01:CDS 20.0%
! AAAATGATTAGTAGGACAAA+AGG - Chr1:89029546-89029565 None:intergenic 25.0%
! AAAGTTCAAGTATTTCACAA+TGG + Chr1:89028279-89028298 MsG0180005240.01.T01:CDS 25.0%
! AACTTGATTATGAAGAATGA+GGG - Chr1:89026586-89026605 None:intergenic 25.0%
! AATACAATTTAACCACTTTC+TGG + Chr1:89022244-89022263 MsG0180005240.01.T01:intron 25.0%
! ACAATTATTATGATTAGTGG+TGG - Chr1:89024575-89024594 None:intergenic 25.0%
! ACTAAGTTGTATGAAAATCT+TGG + Chr1:89023601-89023620 MsG0180005240.01.T01:intron 25.0%
! AGAAAGTGGTTAAATTGTAT+TGG - Chr1:89022245-89022264 None:intergenic 25.0%
! AGAGAATTTAATACCTCAAT+CGG - Chr1:89028521-89028540 None:intergenic 25.0%
! AGTTATACTTACAATTCATG+TGG - Chr1:89021959-89021978 None:intergenic 25.0%
! ATAACTTTACGCATATCTTA+TGG - Chr1:89022732-89022751 None:intergenic 25.0%
! ATAAGGAAAGTCAAAATTTC+TGG + Chr1:89026999-89027018 MsG0180005240.01.T01:intron 25.0%
! ATACTCTTCAATATTCTCAT+CGG + Chr1:89021885-89021904 MsG0180005240.01.T01:intron 25.0%
! ATTAAATGCACTGTTGAAAA+TGG - Chr1:89022600-89022619 None:intergenic 25.0%
! CAATCTTAAAACAACAACAA+AGG + Chr1:89021543-89021562 MsG0180005240.01.T01:intron 25.0%
! CACAAATAAATCAACACTTT+AGG + Chr1:89021590-89021609 MsG0180005240.01.T01:intron 25.0%
! CATAGAAAAACCTGTTAAAA+TGG - Chr1:89028799-89028818 None:intergenic 25.0%
! CATTAACCCACAAATTATTT+CGG - Chr1:89025373-89025392 None:intergenic 25.0%
! CATTTAAGAAACAAAGAAAG+GGG + Chr1:89026939-89026958 MsG0180005240.01.T01:intron 25.0%
! CCAATAAAAACATATTTGGA+AGG + Chr1:89022675-89022694 MsG0180005240.01.T01:intron 25.0%
! CTTTAAATGGGATAAAAACA+TGG - Chr1:89021219-89021238 None:intergenic 25.0%
! GAAAGTGGTTAAATTGTATT+GGG - Chr1:89022244-89022263 None:intergenic 25.0%
! GAACCCAATAAAAACATATT+TGG + Chr1:89022671-89022690 MsG0180005240.01.T01:intron 25.0%
! GCATTTAAGAAACAAAGAAA+GGG + Chr1:89026938-89026957 MsG0180005240.01.T01:intron 25.0%
! GCCAAAAAGGAAAAAATTAA+TGG - Chr1:89029496-89029515 None:intergenic 25.0%
! GTAAATTGTCTCTTGTAAAT+AGG - Chr1:89025189-89025208 None:intergenic 25.0%
! GTTAAATTGTATTGGGAAAA+AGG - Chr1:89022237-89022256 None:intergenic 25.0%
! TAAACACTGTTCACAAAAAT+GGG - Chr1:89022643-89022662 None:intergenic 25.0%
! TAAGGAAAGTCAAAATTTCT+GGG + Chr1:89027000-89027019 MsG0180005240.01.T01:intron 25.0%
! TATGACTTCAGTTTACATAT+TGG + Chr1:89028815-89028834 MsG0180005240.01.T01:intron 25.0%
! TATGATAAGGATGAATATGA+AGG + Chr1:89027220-89027239 MsG0180005240.01.T01:CDS 25.0%
! TATTCTTGTGACTCTTTAAT+GGG + Chr1:89023852-89023871 MsG0180005240.01.T01:intron 25.0%
! TATTTATTTATGCATGTGCT+TGG + Chr1:89029798-89029817 MsG0180005240.01.T01:three_prime_UTR 25.0%
! TCAATCATATCGTTATGATA+AGG + Chr1:89027207-89027226 MsG0180005240.01.T01:CDS 25.0%
! TCTAGTGATAAAAGTTAATC+AGG - Chr1:89021724-89021743 None:intergenic 25.0%
! TGACCTTATAAATGAGAAAA+TGG + Chr1:89025413-89025432 MsG0180005240.01.T01:intron 25.0%
! TGCATTTAAGAAACAAAGAA+AGG + Chr1:89026937-89026956 MsG0180005240.01.T01:intron 25.0%
! TGTCTAAACTATATTAGAGA+TGG + Chr1:89028455-89028474 MsG0180005240.01.T01:CDS 25.0%
! TTAAAAATTGGATTGTGGAT+AGG - Chr1:89022936-89022955 None:intergenic 25.0%
! TTAAATGCACTGTTGAAAAT+GGG - Chr1:89022599-89022618 None:intergenic 25.0%
! TTATCAACAAGAACAACAAA+AGG + Chr1:89027349-89027368 MsG0180005240.01.T01:intron 25.0%
! TTATTCTTGTGACTCTTTAA+TGG + Chr1:89023851-89023870 MsG0180005240.01.T01:intron 25.0%
! TTCTGTCAAAACAATATTCT+TGG + Chr1:89026396-89026415 MsG0180005240.01.T01:CDS 25.0%
! TTGATCATATGAGTTAACAA+AGG - Chr1:89021435-89021454 None:intergenic 25.0%
! TTGTGAACATGATTGATTAA+AGG + Chr1:89027561-89027580 MsG0180005240.01.T01:intron 25.0%
! TTTAATCAATCATGTTCACA+AGG - Chr1:89027562-89027581 None:intergenic 25.0%
! TTTACCTACATTTAAGAGAA+AGG + Chr1:89028546-89028565 MsG0180005240.01.T01:CDS 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG + Chr1:89027519-89027538 MsG0180005240.01.T01:intron 25.0%
!! AGTGTTTCTTATATTTTCCA+AGG + Chr1:89024092-89024111 MsG0180005240.01.T01:intron 25.0%
!! ATCCAGATATATGAGATTTT+AGG + Chr1:89021478-89021497 MsG0180005240.01.T01:intron 25.0%
!! ATGAATTTTTGTGACATACT+TGG + Chr1:89027062-89027081 MsG0180005240.01.T01:intron 25.0%
!! ATTCATATTTGAGACATACA+AGG + Chr1:89023505-89023524 MsG0180005240.01.T01:intron 25.0%
!! ATTCTGAATTTTCTTTGACT+TGG + Chr1:89023627-89023646 MsG0180005240.01.T01:intron 25.0%
!! ATTGAGGTATTAAATTCTCT+TGG + Chr1:89028521-89028540 MsG0180005240.01.T01:CDS 25.0%
!! CAAATGATTTTATATGCTTC+AGG + Chr1:89022113-89022132 MsG0180005240.01.T01:intron 25.0%
!! GGAAAATATTTTCTTAACAG+AGG + Chr1:89023649-89023668 MsG0180005240.01.T01:intron 25.0%
!! GGTCTTGTATATAACAAATA+TGG - Chr1:89028078-89028097 None:intergenic 25.0%
!! GTAAGAGTGTAATAAAAACA+AGG - Chr1:89025929-89025948 None:intergenic 25.0%
!! GTGTTTCTTATATTTTCCAA+GGG + Chr1:89024093-89024112 MsG0180005240.01.T01:intron 25.0%
!! TACATGTTTTACATGAATGA+TGG - Chr1:89024454-89024473 None:intergenic 25.0%
!! TCCAGATATATGAGATTTTA+GGG + Chr1:89021479-89021498 MsG0180005240.01.T01:intron 25.0%
!!! AATTTTAGGGTTTCTAGAAA+TGG - Chr1:89024318-89024337 None:intergenic 25.0%
!!! ACAAAACTTTGAAGTTGAAA+TGG + Chr1:89025702-89025721 MsG0180005240.01.T01:CDS 25.0%
!!! AGCAAAGATAAATTGTTTTG+GGG + Chr1:89029687-89029706 MsG0180005240.01.T01:three_prime_UTR 25.0%
!!! ATTTTTTCTATTGCTTCTTC+AGG - Chr1:89021149-89021168 None:intergenic 25.0%
!!! CAAATTTGTTGACATAAACA+TGG - Chr1:89024958-89024977 None:intergenic 25.0%
!!! CATAATACTTTTGTTTGCTT+CGG + Chr1:89022515-89022534 MsG0180005240.01.T01:intron 25.0%
!!! CCTTCCAAATATGTTTTTAT+TGG - Chr1:89022678-89022697 None:intergenic 25.0%
!!! GTTTTTCTTTTTCAGTGAAA+AGG + Chr1:89028981-89029000 MsG0180005240.01.T01:intron 25.0%
!!! TTCTGAATTTTCTTTGACTT+GGG + Chr1:89023628-89023647 MsG0180005240.01.T01:intron 25.0%
!!! TTGTTGTTTAATGAAATGTG+TGG + Chr1:89022059-89022078 MsG0180005240.01.T01:intron 25.0%
AAAACAATATTCTTGGAAGG+AGG + Chr1:89026403-89026422 MsG0180005240.01.T01:CDS 30.0%
AAACCTGTTAAAATGGTGAT+AGG - Chr1:89028792-89028811 None:intergenic 30.0%
AAAGGTAACAAGTATACTCT+CGG - Chr1:89021417-89021436 None:intergenic 30.0%
AACCTGTTAAAATGGTGATA+GGG - Chr1:89028791-89028810 None:intergenic 30.0%
AAGAACAGTTGTTATACATG+AGG + Chr1:89029335-89029354 MsG0180005240.01.T01:CDS 30.0%
AATAGGACACTTCCATTTAT+TGG + Chr1:89024686-89024705 MsG0180005240.01.T01:CDS 30.0%
AATTGTTTGCCACAAATTTC+AGG + Chr1:89024589-89024608 MsG0180005240.01.T01:intron 30.0%
AGAACAGTTGTTATACATGA+GGG + Chr1:89029336-89029355 MsG0180005240.01.T01:CDS 30.0%
AGACAGTAACAAAAAGGAAA+AGG - Chr1:89027148-89027167 None:intergenic 30.0%
AGTATATTCTGTCAGTTGTT+TGG + Chr1:89025767-89025786 MsG0180005240.01.T01:CDS 30.0%
AGTTTACACTAGATAGTGTT+TGG + Chr1:89026607-89026626 MsG0180005240.01.T01:intron 30.0%
ATAGGTTCATAATCATGATG+AGG - Chr1:89022918-89022937 None:intergenic 30.0%
ATGCACCAAAAAATACATAC+AGG - Chr1:89027040-89027059 None:intergenic 30.0%
ATTAAGGCAACATATTTACG+AGG - Chr1:89027172-89027191 None:intergenic 30.0%
ATTAGACTCTATTAGGTGTT+TGG + Chr1:89026551-89026570 MsG0180005240.01.T01:intron 30.0%
ATTCTTGTGACTCTTTAATG+GGG + Chr1:89023853-89023872 MsG0180005240.01.T01:intron 30.0%
ATTGTGCTCAATTTCTTATG+TGG - Chr1:89023758-89023777 None:intergenic 30.0%
CAACTTGATTATGAAGAATG+AGG - Chr1:89026587-89026606 None:intergenic 30.0%
CTTACCATTGTGAAATACTT+TGG + Chr1:89021316-89021335 MsG0180005240.01.T01:intron 30.0%
GAAAAAATACTAATCACAGC+AGG - Chr1:89022998-89023017 None:intergenic 30.0%
GAAATCCAGATCATAATTTG+TGG + Chr1:89027620-89027639 MsG0180005240.01.T01:intron 30.0%
GAAGGTAGTAAACAATATAG+TGG + Chr1:89022828-89022847 MsG0180005240.01.T01:intron 30.0%
GAGAGATTACAGATGATTAT+TGG + Chr1:89025041-89025060 MsG0180005240.01.T01:intron 30.0%
GATTCCTTTCTCTTAAATGT+AGG - Chr1:89028553-89028572 None:intergenic 30.0%
GGGGAATATATTTAGATTTC+AGG + Chr1:89021499-89021518 MsG0180005240.01.T01:intron 30.0%
GTAAACACTGTTCACAAAAA+TGG - Chr1:89022644-89022663 None:intergenic 30.0%
GTCAAAACAATATTCTTGGA+AGG + Chr1:89026400-89026419 MsG0180005240.01.T01:CDS 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + Chr1:89025288-89025307 MsG0180005240.01.T01:intron 30.0%
TACATTCCAACTTACTTTGA+GGG - Chr1:89027517-89027536 None:intergenic 30.0%
TAGGAACAACTGTATTTAGA+GGG - Chr1:89021832-89021851 None:intergenic 30.0%
TATGACATCTGACAATAGTT+AGG - Chr1:89023020-89023039 None:intergenic 30.0%
TCAAATTGAAATTACAGCTC+AGG + Chr1:89028735-89028754 MsG0180005240.01.T01:CDS 30.0%
TCAGATTATGCAAAACTTTC+TGG - Chr1:89027412-89027431 None:intergenic 30.0%
TCATGACAAAAAACATAGCA+AGG - Chr1:89028850-89028869 None:intergenic 30.0%
TGAGAAGAATATTGAGATGA+TGG - Chr1:89026053-89026072 None:intergenic 30.0%
TGGTGATTCAAAATGATGAT+TGG + Chr1:89020972-89020991 MsG0180005240.01.T01:CDS 30.0%
TTAAGGCAACATATTTACGA+GGG - Chr1:89027171-89027190 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG - Chr1:89027518-89027537 None:intergenic 30.0%
TTAGGAACAACTGTATTTAG+AGG - Chr1:89021833-89021852 None:intergenic 30.0%
TTATGTGAGGAAAAAGTTGA+AGG - Chr1:89028380-89028399 None:intergenic 30.0%
TTCAAGTATTTCACAATGGT+TGG + Chr1:89028283-89028302 MsG0180005240.01.T01:CDS 30.0%
TTGACCTTATAAACTAGAGT+GGG + Chr1:89025500-89025519 MsG0180005240.01.T01:intron 30.0%
! AAACCAAACCAGCTTTTAAA+AGG - Chr1:89020931-89020950 None:intergenic 30.0%
! AAGTTTTGCATAATCTGACA+AGG + Chr1:89027414-89027433 MsG0180005240.01.T01:intron 30.0%
! AGATGTTTGTTGAAATTCTG+AGG + Chr1:89024208-89024227 MsG0180005240.01.T01:intron 30.0%
! AGTTTTGCATAATCTGACAA+GGG + Chr1:89027415-89027434 MsG0180005240.01.T01:intron 30.0%
! ATCCATTCGTTTTATAGTGA+TGG + Chr1:89026328-89026347 MsG0180005240.01.T01:intron 30.0%
! ATTTTACTGATCGAAATCAG+AGG - Chr1:89026877-89026896 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG + Chr1:89027518-89027537 MsG0180005240.01.T01:intron 30.0%
! CATAGGATCTCTTCATATTT+TGG + Chr1:89025999-89026018 MsG0180005240.01.T01:intron 30.0%
! CCAGATATATGAGATTTTAG+GGG + Chr1:89021480-89021499 MsG0180005240.01.T01:intron 30.0%
! TAACAGATTCATTTAGAGTC+AGG + Chr1:89021633-89021652 MsG0180005240.01.T01:intron 30.0%
! TAATTGATTTCCTATGTTGC+AGG + Chr1:89028117-89028136 MsG0180005240.01.T01:intron 30.0%
! TATGAAGATGGAAAAAGTGT+TGG + Chr1:89022477-89022496 MsG0180005240.01.T01:intron 30.0%
! TATTTGTTAGTTCACTTGAG+AGG - Chr1:89028099-89028118 None:intergenic 30.0%
! TCCATTCGTTTTATAGTGAT+GGG + Chr1:89026329-89026348 MsG0180005240.01.T01:intron 30.0%
! TGAGGTTGTTTCAAAACATA+TGG - Chr1:89021934-89021953 None:intergenic 30.0%
! TGATTGATTAAAGGAGCATA+TGG + Chr1:89027570-89027589 MsG0180005240.01.T01:intron 30.0%
!! AAACTTTGAAGTTGAAATGG+AGG + Chr1:89025705-89025724 MsG0180005240.01.T01:CDS 30.0%
!! AACCAAACCAGCTTTTAAAA+GGG - Chr1:89020930-89020949 None:intergenic 30.0%
!! AATTGGCCTTCAACTTAATA+TGG + Chr1:89025570-89025589 MsG0180005240.01.T01:intron 30.0%
!! GAACTACCATATTAAGTTGA+AGG - Chr1:89025579-89025598 None:intergenic 30.0%
!! TTCAACTTTTTCCTCACATA+AGG + Chr1:89028379-89028398 MsG0180005240.01.T01:CDS 30.0%
!!! ATCAGCCTGTATGTATTTTT+TGG + Chr1:89027032-89027051 MsG0180005240.01.T01:intron 30.0%
!!! ATCTTGTCCTGTCTTTTTTA+GGG + Chr1:89025458-89025477 MsG0180005240.01.T01:intron 30.0%
!!! GGCACCATATGTAATTTTTT+CGG - Chr1:89024418-89024437 None:intergenic 30.0%
!!! TATCTTGTCCTGTCTTTTTT+AGG + Chr1:89025457-89025476 MsG0180005240.01.T01:intron 30.0%
!!! TGCAACTGAAATACTTTTTC+AGG - Chr1:89026243-89026262 None:intergenic 30.0%
!!! TTCTTTTTCAACTATTAGCG+AGG + Chr1:89024026-89024045 MsG0180005240.01.T01:intron 30.0%
AAAACCTCGGATCCAATAAA+TGG - Chr1:89024701-89024720 None:intergenic 35.0%
AAACCAGAATTTCTACCAGA+AGG - Chr1:89023374-89023393 None:intergenic 35.0%
AAATCATTGTTGTCTGACCA+TGG - Chr1:89029519-89029538 None:intergenic 35.0%
AACTAGACCCTAAAAAAGAC+AGG - Chr1:89025468-89025487 None:intergenic 35.0%
AACTGTATTTAGAGGGAAGT+TGG - Chr1:89021825-89021844 None:intergenic 35.0%
AAGCTATCTTCATTAGTTGC+AGG - Chr1:89023725-89023744 None:intergenic 35.0%
AAGCTCCTGTGACATTATTA+AGG - Chr1:89027188-89027207 None:intergenic 35.0%
AAGGTAACAAGTATACTCTC+GGG - Chr1:89021416-89021435 None:intergenic 35.0%
AATATTCTTCTCATCCCGAT+AGG + Chr1:89026060-89026079 MsG0180005240.01.T01:intron 35.0%
AATCATTGTTGTCTGACCAT+GGG - Chr1:89029518-89029537 None:intergenic 35.0%
ACGATAGATGATAGGTAAAC+AGG + Chr1:89026968-89026987 MsG0180005240.01.T01:intron 35.0%
ACTGTAATCCTTCTGCATAT+TGG - Chr1:89023888-89023907 None:intergenic 35.0%
AGACTCGTTGAAATCCTATT+TGG + Chr1:89028919-89028938 MsG0180005240.01.T01:intron 35.0%
AGCAATTCTGTTGGAGAAAA+AGG - Chr1:89026776-89026795 None:intergenic 35.0%
AGCTACCATATTTCCTGTTT+AGG - Chr1:89026807-89026826 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG - Chr1:89027628-89027647 None:intergenic 35.0%
AGTTCCATTGATCTCAACTT+TGG - Chr1:89029222-89029241 None:intergenic 35.0%
ATAAAGAAGAGGGAAATACC+TGG - Chr1:89022202-89022221 None:intergenic 35.0%
ATACAAGGAATTCAGATGCT+AGG + Chr1:89023520-89023539 MsG0180005240.01.T01:intron 35.0%
ATACCTTCTGGTAGAAATTC+TGG + Chr1:89023368-89023387 MsG0180005240.01.T01:CDS 35.0%
ATATGCAACTGTTCACACAA+TGG + Chr1:89029107-89029126 MsG0180005240.01.T01:CDS 35.0%
ATATTCTTCTCATCCCGATA+GGG + Chr1:89026061-89026080 MsG0180005240.01.T01:intron 35.0%
ATGACTCGTAGGTCTTTAAA+TGG - Chr1:89021232-89021251 None:intergenic 35.0%
ATGCAAAGGATCCAAAAGAA+TGG + Chr1:89029658-89029677 MsG0180005240.01.T01:three_prime_UTR 35.0%
ATGGACAAACTAGAAATGCA+GGG + Chr1:89024819-89024838 MsG0180005240.01.T01:CDS 35.0%
ATGGAGGAAATTTGATCACT+TGG + Chr1:89025721-89025740 MsG0180005240.01.T01:CDS 35.0%
ATTAGTTGCAGGAAGAATCT+GGG - Chr1:89023714-89023733 None:intergenic 35.0%
ATTGTACTTGTCCAAAACCT+CGG - Chr1:89024714-89024733 None:intergenic 35.0%
CAAATACACAGATCTTCCTT+TGG - Chr1:89028605-89028624 None:intergenic 35.0%
CAAATCATACAATGACTCGT+AGG - Chr1:89021243-89021262 None:intergenic 35.0%
CAATAGCATGGACTTCAAAT+AGG + Chr1:89024669-89024688 MsG0180005240.01.T01:CDS 35.0%
CAGAATCTTCCAGTGATAAA+TGG - Chr1:89026372-89026391 None:intergenic 35.0%
CCAGAAACATAGATCAACAT+AGG + Chr1:89025982-89026001 MsG0180005240.01.T01:intron 35.0%
CCCCTAAAATCTCATATATC+TGG - Chr1:89021483-89021502 None:intergenic 35.0%
CCTATGTTGATCTATGTTTC+TGG - Chr1:89025985-89026004 None:intergenic 35.0%
CTAAAGAAAGTTTACTGCTC+AGG - Chr1:89025613-89025632 None:intergenic 35.0%
CTATTATCAATACCAAAGCG+TGG - Chr1:89026280-89026299 None:intergenic 35.0%
CTTACAATTCATGTGGTTTG+AGG - Chr1:89021952-89021971 None:intergenic 35.0%
CTTCAGGCAAAAATGAATCA+AGG - Chr1:89024769-89024788 None:intergenic 35.0%
CTTGACCTTATAAACTAGAG+TGG + Chr1:89025499-89025518 MsG0180005240.01.T01:intron 35.0%
CTTTCTCTTGTAAATAGGAC+CGG + Chr1:89025293-89025312 MsG0180005240.01.T01:intron 35.0%
CTTTGCATTCCTTCTGTAAA+GGG - Chr1:89029646-89029665 None:intergenic 35.0%
GAAGATATAGGTGAGAATCA+TGG + Chr1:89021085-89021104 MsG0180005240.01.T01:intron 35.0%
GACACTTCTTAACATCTCTA+AGG - Chr1:89028439-89028458 None:intergenic 35.0%
GAGAAATCCTCCTAAAACAA+AGG - Chr1:89023958-89023977 None:intergenic 35.0%
GAGTATACCAATACTTTCAG+TGG - Chr1:89024185-89024204 None:intergenic 35.0%
GATAACATCGTATTATCACC+TGG + Chr1:89021040-89021059 MsG0180005240.01.T01:CDS 35.0%
GATTCTCACCTATATCTTCT+GGG - Chr1:89021084-89021103 None:intergenic 35.0%
GCAAAGAAAAAACATGCATC+TGG - Chr1:89028197-89028216 None:intergenic 35.0%
GCAATTCTGTTGGAGAAAAA+GGG - Chr1:89026775-89026794 None:intergenic 35.0%
GCTACCATATTTCCTGTTTA+GGG - Chr1:89026806-89026825 None:intergenic 35.0%
GGCTCAAGAAATAGGTTAAA+GGG + Chr1:89021367-89021386 MsG0180005240.01.T01:intron 35.0%
GGTACAAAAAGCAATTCTGT+TGG - Chr1:89026785-89026804 None:intergenic 35.0%
GGTATATACTGAAGCTATGT+TGG + Chr1:89026447-89026466 MsG0180005240.01.T01:intron 35.0%
GTAAACAGGACAAAGACATA+AGG + Chr1:89026982-89027001 MsG0180005240.01.T01:intron 35.0%
TAAGAAACAAAGAAAGGGGT+GGG + Chr1:89026943-89026962 MsG0180005240.01.T01:intron 35.0%
TAAGACGATGGAGAAAATGT+TGG + Chr1:89022884-89022903 MsG0180005240.01.T01:intron 35.0%
TAATCTATCACAGTGTTTGC+TGG - Chr1:89029450-89029469 None:intergenic 35.0%
TACAACTTAGTCCACAATTG+CGG - Chr1:89023592-89023611 None:intergenic 35.0%
TAGAAATGCAGGGTTCTTAT+GGG + Chr1:89024829-89024848 MsG0180005240.01.T01:CDS 35.0%
TATAATGCTCTTGCATGAAG+TGG + Chr1:89026711-89026730 MsG0180005240.01.T01:intron 35.0%
TATATTCATTCTCCTGAGTG+TGG - Chr1:89023225-89023244 None:intergenic 35.0%
TATGAAGAATGAGGGTAACA+AGG - Chr1:89026578-89026597 None:intergenic 35.0%
TATGACCTCAAAGTTGAATG+TGG + Chr1:89028140-89028159 MsG0180005240.01.T01:CDS 35.0%
TATGGACAAACTAGAAATGC+AGG + Chr1:89024818-89024837 MsG0180005240.01.T01:CDS 35.0%
TCAAAATGATGATTGGACGT+GGG + Chr1:89020979-89020998 MsG0180005240.01.T01:CDS 35.0%
TCAAATATTGCGTGAATGCA+GGG + Chr1:89022145-89022164 MsG0180005240.01.T01:CDS 35.0%
TCAATGCTTTGATAAGACGA+TGG + Chr1:89022872-89022891 MsG0180005240.01.T01:intron 35.0%
TCATATAGATACCATCTCTG+TGG - Chr1:89025831-89025850 None:intergenic 35.0%
TCATCGGTATCACAATCAAA+GGG + Chr1:89021901-89021920 MsG0180005240.01.T01:intron 35.0%
TCCCATCACTATAAAACGAA+TGG - Chr1:89026333-89026352 None:intergenic 35.0%
TCGCATGAACAAAACATCTT+AGG + Chr1:89021763-89021782 MsG0180005240.01.T01:intron 35.0%
TCTAACAATATGCATGTCCT+GGG - Chr1:89026516-89026535 None:intergenic 35.0%
TGACTCGTAGGTCTTTAAAT+GGG - Chr1:89021231-89021250 None:intergenic 35.0%
TGATTCTCACCTATATCTTC+TGG - Chr1:89021085-89021104 None:intergenic 35.0%
TGCAACTAATGAAGATAGCT+TGG + Chr1:89023724-89023743 MsG0180005240.01.T01:intron 35.0%
TGGCTCAAGAAATAGGTTAA+AGG + Chr1:89021366-89021385 MsG0180005240.01.T01:intron 35.0%
TGTACCCTAAACAGGAAATA+TGG + Chr1:89026799-89026818 MsG0180005240.01.T01:intron 35.0%
TGTCCTTTCAAAACATATGC+AGG - Chr1:89021985-89022004 None:intergenic 35.0%
TGTTGCCTTAATAATGTCAC+AGG + Chr1:89027180-89027199 MsG0180005240.01.T01:intron 35.0%
TTAAGAAACAAAGAAAGGGG+TGG + Chr1:89026942-89026961 MsG0180005240.01.T01:intron 35.0%
TTACAAACAAGTGGCACATT+TGG + Chr1:89023805-89023824 MsG0180005240.01.T01:intron 35.0%
TTAGAAGGTCAACAATCATC+AGG - Chr1:89029020-89029039 None:intergenic 35.0%
TTAGGAGAGAAGAATAATGC+AGG - Chr1:89023991-89024010 None:intergenic 35.0%
TTATCACTGGAAGATTCTGA+AGG + Chr1:89026373-89026392 MsG0180005240.01.T01:CDS 35.0%
TTCAAAATGATGATTGGACG+TGG + Chr1:89020978-89020997 MsG0180005240.01.T01:CDS 35.0%
TTCAAATATTGCGTGAATGC+AGG + Chr1:89022144-89022163 MsG0180005240.01.T01:CDS 35.0%
TTCAACTATTAGCGAGGATA+AGG + Chr1:89024032-89024051 MsG0180005240.01.T01:intron 35.0%
TTCTTGTGACTCTTTAATGG+GGG + Chr1:89023854-89023873 MsG0180005240.01.T01:intron 35.0%
TTGTCTCTTGTAAATAGGAC+CGG - Chr1:89025184-89025203 None:intergenic 35.0%
TTTCTTCACCAATATGCAGA+AGG + Chr1:89023877-89023896 MsG0180005240.01.T01:intron 35.0%
! AAATTTGGTCTTCACATCTG+TGG + Chr1:89021453-89021472 MsG0180005240.01.T01:intron 35.0%
! ACGTGCTATTAGACTCTATT+AGG + Chr1:89026544-89026563 MsG0180005240.01.T01:intron 35.0%
! AGATCCCACTCTAGTTTATA+AGG - Chr1:89025507-89025526 None:intergenic 35.0%
! ATGATTATTGGCTGAGATGT+AGG + Chr1:89025053-89025072 MsG0180005240.01.T01:intron 35.0%
! ATTTATTGGATCCGAGGTTT+TGG + Chr1:89024700-89024719 MsG0180005240.01.T01:CDS 35.0%
! CTATTTGAAGTCCATGCTAT+TGG - Chr1:89024671-89024690 None:intergenic 35.0%
! GAAAAATCTTTTACTCCCTC+CGG + Chr1:89025162-89025181 MsG0180005240.01.T01:intron 35.0%
! GAAAGTTTGATTCGTGTGTT+CGG + Chr1:89024230-89024249 MsG0180005240.01.T01:intron 35.0%
! GAAGACGTTTTTGTTCTAGT+TGG + Chr1:89024054-89024073 MsG0180005240.01.T01:intron 35.0%
! GTGTTCGTTTTACAAACAAG+TGG + Chr1:89023796-89023815 MsG0180005240.01.T01:intron 35.0%
! TAGAAAGTGCAACACATTGA+AGG - Chr1:89022279-89022298 None:intergenic 35.0%
! TAGGTGAGAATCATGGATTT+TGG + Chr1:89021092-89021111 MsG0180005240.01.T01:intron 35.0%
! TAGTTTGTCCATAGTCAACA+AGG - Chr1:89024811-89024830 None:intergenic 35.0%
! TATAGTGATGGGAGTTCAAA+AGG + Chr1:89026340-89026359 MsG0180005240.01.T01:intron 35.0%
! TCATCATTTTGAATCACCAC+AGG - Chr1:89020971-89020990 None:intergenic 35.0%
! TCTTGAATATTTGACTTCCG+TGG - Chr1:89025015-89025034 None:intergenic 35.0%
! TGATTATTGGCTGAGATGTA+GGG + Chr1:89025054-89025073 MsG0180005240.01.T01:intron 35.0%
! TTGCTATACCACCATTCTTT+TGG - Chr1:89029672-89029691 None:intergenic 35.0%
!! ACACCTGCATATGTTTTGAA+AGG + Chr1:89021979-89021998 MsG0180005240.01.T01:intron 35.0%
!! ACGTTTTTGTTCTAGTTGGT+GGG + Chr1:89024058-89024077 MsG0180005240.01.T01:intron 35.0%
!! AGAAATTCTGGTTTCAAGGT+GGG + Chr1:89023380-89023399 MsG0180005240.01.T01:intron 35.0%
!! AGGACAATGAATTTGCTGAT+TGG - Chr1:89027494-89027513 None:intergenic 35.0%
!! GGTCTACCATTTGATTTTCA+CGG + Chr1:89027241-89027260 MsG0180005240.01.T01:CDS 35.0%
!! TAGAAATTCTGGTTTCAAGG+TGG + Chr1:89023379-89023398 MsG0180005240.01.T01:intron 35.0%
!! TCAAAGCATTGACATACATC+AGG - Chr1:89022864-89022883 None:intergenic 35.0%
!! TGGTAGAAATTCTGGTTTCA+AGG + Chr1:89023376-89023395 MsG0180005240.01.T01:CDS 35.0%
!! TTCCCTATCACCATTTTAAC+AGG + Chr1:89028786-89028805 MsG0180005240.01.T01:intron 35.0%
!!! AAGTCAAAGGGCATTTTTCT+TGG - Chr1:89022789-89022808 None:intergenic 35.0%
!!! AGATAAATTGTTTTGGGGTG+AGG + Chr1:89029692-89029711 MsG0180005240.01.T01:three_prime_UTR 35.0%
!!! ATTTTTTCCTTTTTGGCCCA+TGG + Chr1:89029499-89029518 MsG0180005240.01.T01:three_prime_UTR 35.0%
!!! CTCTCGGGATACTTTTTTAT+TGG - Chr1:89021401-89021420 None:intergenic 35.0%
!!! CTGGAGTTTTAGATTTGTGA+TGG - Chr1:89028178-89028197 None:intergenic 35.0%
!!! CTTTTTCAGTGAAAAGGATC+AGG + Chr1:89028987-89029006 MsG0180005240.01.T01:intron 35.0%
!!! GGGATACTTTTTTATTGGCA+TGG - Chr1:89021396-89021415 None:intergenic 35.0%
!!! TGGGAAAATCGGATTTTTTG+AGG - Chr1:89023695-89023714 None:intergenic 35.0%
!!! TTGCTTTTTGTACCCTAAAC+AGG + Chr1:89026791-89026810 MsG0180005240.01.T01:intron 35.0%
!!! TTTTCCGTCTCCTTTGTTTT+AGG + Chr1:89023945-89023964 MsG0180005240.01.T01:intron 35.0%
AAAGCGTGGAAAGATTAGAC+TGG - Chr1:89026266-89026285 None:intergenic 40.0%
AACAAAGGCTTTGCACTAGA+CGG + Chr1:89021558-89021577 MsG0180005240.01.T01:intron 40.0%
AAGGTATGCCCTGAAAAAGT+TGG - Chr1:89023355-89023374 None:intergenic 40.0%
AAGTGCTCATTCCAATAGCA+TGG + Chr1:89024657-89024676 MsG0180005240.01.T01:CDS 40.0%
AAGTTGGAATGTAAAGGGAC+AGG + Chr1:89027524-89027543 MsG0180005240.01.T01:intron 40.0%
ACAATGGTGAGTACAATTCG+TGG + Chr1:89029123-89029142 MsG0180005240.01.T01:CDS 40.0%
ACAATGGTTGGATGATACTG+AGG + Chr1:89028295-89028314 MsG0180005240.01.T01:CDS 40.0%
ACGAGCTATAGTACCCTTAA+TGG - Chr1:89028687-89028706 None:intergenic 40.0%
ACTTCCATTTATTGGATCCG+AGG + Chr1:89024694-89024713 MsG0180005240.01.T01:CDS 40.0%
AGGAAATTTGATCACTTGGC+TGG + Chr1:89025725-89025744 MsG0180005240.01.T01:CDS 40.0%
AGTCTAATCTTTCCACGCTT+TGG + Chr1:89026265-89026284 MsG0180005240.01.T01:intron 40.0%
ATCGAACCACCTGAAATTTG+TGG - Chr1:89024601-89024620 None:intergenic 40.0%
ATCGGTATCACAATCAAAGG+GGG + Chr1:89021903-89021922 MsG0180005240.01.T01:intron 40.0%
ATCTCTTCGTATTCGTCTTC+TGG - Chr1:89029408-89029427 None:intergenic 40.0%
ATGCAGGGATATTCCTATTC+TGG + Chr1:89022160-89022179 MsG0180005240.01.T01:CDS 40.0%
ATTCTGTCAGTTGTTTGGAC+AGG + Chr1:89025772-89025791 MsG0180005240.01.T01:CDS 40.0%
ATTCTGTTGGAGAAAAAGGG+CGG - Chr1:89026772-89026791 None:intergenic 40.0%
ATTGTGTAATTGCCACACTC+AGG + Chr1:89023210-89023229 MsG0180005240.01.T01:intron 40.0%
CAAAGGATCCAAAAGAATGG+TGG + Chr1:89029661-89029680 MsG0180005240.01.T01:three_prime_UTR 40.0%
CAATGGTGAGTACAATTCGT+GGG + Chr1:89029124-89029143 MsG0180005240.01.T01:CDS 40.0%
CAGGAAGAATCTGGGAAAAT+CGG - Chr1:89023706-89023725 None:intergenic 40.0%
CATCGGTATCACAATCAAAG+GGG + Chr1:89021902-89021921 MsG0180005240.01.T01:intron 40.0%
CATTAGTTGCAGGAAGAATC+TGG - Chr1:89023715-89023734 None:intergenic 40.0%
CATTGTTGATCTACCACATG+TGG + Chr1:89021270-89021289 MsG0180005240.01.T01:intron 40.0%
CCTTTACAGAAGGAATGCAA+AGG + Chr1:89029644-89029663 MsG0180005240.01.T01:three_prime_UTR 40.0%
CCTTTGCATTCCTTCTGTAA+AGG - Chr1:89029647-89029666 None:intergenic 40.0%
CGAGCTATAGTACCCTTAAT+GGG - Chr1:89028686-89028705 None:intergenic 40.0%
CTAACAATATGCATGTCCTG+GGG - Chr1:89026515-89026534 None:intergenic 40.0%
CTAGAAATGCAGGGTTCTTA+TGG + Chr1:89024828-89024847 MsG0180005240.01.T01:CDS 40.0%
CTAGAAGCTAAGCCCATTAA+GGG + Chr1:89028671-89028690 MsG0180005240.01.T01:CDS 40.0%
CTCATCGGTATCACAATCAA+AGG + Chr1:89021900-89021919 MsG0180005240.01.T01:intron 40.0%
CTCGAATCATGTACTAGCAT+AGG - Chr1:89026689-89026708 None:intergenic 40.0%
CTCTAACAATATGCATGTCC+TGG - Chr1:89026517-89026536 None:intergenic 40.0%
GACCAAGGTCATTTCTTAGA+AGG - Chr1:89029035-89029054 None:intergenic 40.0%
GATCGAAATCAGAGGAGAAT+GGG - Chr1:89026869-89026888 None:intergenic 40.0%
GATTGTACTTCCATGAGATG+CGG - Chr1:89029087-89029106 None:intergenic 40.0%
GCACTGCATGTCTTGAATTT+CGG + Chr1:89022372-89022391 MsG0180005240.01.T01:intron 40.0%
GCTTCAGTCATAACATATCC+AGG - Chr1:89029607-89029626 None:intergenic 40.0%
GGAAAACGTGCTAATTCTGA+TGG + Chr1:89025091-89025110 MsG0180005240.01.T01:intron 40.0%
GGAAATTTGATCACTTGGCT+GGG + Chr1:89025726-89025745 MsG0180005240.01.T01:CDS 40.0%
GGAAGAACTATCCAACCAAA+AGG - Chr1:89025810-89025829 None:intergenic 40.0%
GGACTATAGATCCACTCAAA+CGG - Chr1:89021198-89021217 None:intergenic 40.0%
GTACAATTCGTGGGAAAAAG+AGG + Chr1:89029133-89029152 MsG0180005240.01.T01:CDS 40.0%
GTGAATTGTAATACTCCCTC+CGG - Chr1:89025315-89025334 None:intergenic 40.0%
GTGTGCTTACAAGCTTGATT+TGG + Chr1:89029758-89029777 MsG0180005240.01.T01:three_prime_UTR 40.0%
TAACAATATGCATGTCCTGG+GGG - Chr1:89026514-89026533 None:intergenic 40.0%
TAATTCACAATGGCCACATG+TGG - Chr1:89021286-89021305 None:intergenic 40.0%
TATCCGCCGTGAAAATCAAA+TGG - Chr1:89027250-89027269 None:intergenic 40.0%
TCCTCCTAAAACAAAGGAGA+CGG - Chr1:89023952-89023971 None:intergenic 40.0%
TCTCTTCGTATTCGTCTTCT+GGG - Chr1:89029407-89029426 None:intergenic 40.0%
TCTCTTGAAAGTTGTTCTCG+AGG + Chr1:89029249-89029268 MsG0180005240.01.T01:CDS 40.0%
TCTGTAAATGTCCGTTTGAG+TGG + Chr1:89021184-89021203 MsG0180005240.01.T01:intron 40.0%
TGACACCACATTCAACTTTG+AGG - Chr1:89028148-89028167 None:intergenic 40.0%
TGATCGAAATCAGAGGAGAA+TGG - Chr1:89026870-89026889 None:intergenic 40.0%
TGCAGGGATATTCCTATTCT+GGG + Chr1:89022161-89022180 MsG0180005240.01.T01:CDS 40.0%
TGTTTGCCACAAATTTCAGG+TGG + Chr1:89024592-89024611 MsG0180005240.01.T01:intron 40.0%
TTACATGAATGATGGCACTG+CGG - Chr1:89024446-89024465 None:intergenic 40.0%
TTTCAGTGAAAAGGATCAGG+CGG + Chr1:89028990-89029009 MsG0180005240.01.T01:intron 40.0%
TTTCCAAGGGAAAGAGATGT+CGG + Chr1:89024106-89024125 MsG0180005240.01.T01:intron 40.0%
TTTGGAAGCAGTTAACGTTC+AGG + Chr1:89026125-89026144 MsG0180005240.01.T01:CDS 40.0%
! AGCTGAAAACACCTTTTGGT+TGG + Chr1:89025796-89025815 MsG0180005240.01.T01:CDS 40.0%
! AGGAAGCTGAAAACACCTTT+TGG + Chr1:89025792-89025811 MsG0180005240.01.T01:CDS 40.0%
! ATATGTTGGTTACATCGGGT+AGG + Chr1:89027267-89027286 MsG0180005240.01.T01:intron 40.0%
! ATGTAGGGCATCATACAACA+AGG + Chr1:89025069-89025088 MsG0180005240.01.T01:intron 40.0%
! ATTCCAACTTACTTTGAGGG+AGG - Chr1:89027514-89027533 None:intergenic 40.0%
! CATGTGCTTGGCAGTAATTT+TGG + Chr1:89029810-89029829 MsG0180005240.01.T01:three_prime_UTR 40.0%
! CATTTTGAATCACCACAGGA+GGG - Chr1:89020967-89020986 None:intergenic 40.0%
! CTCAATCGGTTTCCTTATCT+GGG - Chr1:89028507-89028526 None:intergenic 40.0%
! GACCTTCTAAGAAATGACCT+TGG + Chr1:89029030-89029049 MsG0180005240.01.T01:CDS 40.0%
! GGCACCAAAGTATTTCACAA+TGG - Chr1:89021323-89021342 None:intergenic 40.0%
! TCATTTTGAATCACCACAGG+AGG - Chr1:89020968-89020987 None:intergenic 40.0%
! TGAAGTGCCACTGAAAGTAT+TGG + Chr1:89024175-89024194 MsG0180005240.01.T01:intron 40.0%
! TGCGAGAAGAAGATTAGTCA+AGG - Chr1:89021748-89021767 None:intergenic 40.0%
! TGTAGGGCATCATACAACAA+GGG + Chr1:89025070-89025089 MsG0180005240.01.T01:intron 40.0%
! TTCCAACTTACTTTGAGGGA+GGG - Chr1:89027513-89027532 None:intergenic 40.0%
! TTTCTAGTGTGTGCATGAGT+GGG - Chr1:89025137-89025156 None:intergenic 40.0%
! TTTTCGTTCATGGGAGGAAA+AGG + Chr1:89026094-89026113 MsG0180005240.01.T01:CDS 40.0%
! TTTTTGCCTGAAGCAGGAAA+CGG + Chr1:89024776-89024795 MsG0180005240.01.T01:CDS 40.0%
!! AACTTTCTGGCTGATGCTTT+AGG - Chr1:89027399-89027418 None:intergenic 40.0%
!! ACTTTTTCCTCACATAAGGC+TGG + Chr1:89028383-89028402 MsG0180005240.01.T01:CDS 40.0%
!! AGTTCAAGCCTTGTTGACTA+TGG + Chr1:89024800-89024819 MsG0180005240.01.T01:CDS 40.0%
!! ATTAAGGGTACTATAGCTCG+TGG + Chr1:89028686-89028705 MsG0180005240.01.T01:CDS 40.0%
!! CTACCATTTGATTTTCACGG+CGG + Chr1:89027244-89027263 MsG0180005240.01.T01:CDS 40.0%
!! GACGTTTTTGTTCTAGTTGG+TGG + Chr1:89024057-89024076 MsG0180005240.01.T01:intron 40.0%
!! GATTCATTTTTGCCTGAAGC+AGG + Chr1:89024770-89024789 MsG0180005240.01.T01:CDS 40.0%
!! GTCCCTTTTAAAAGCTGGTT+TGG + Chr1:89020925-89020944 MsG0180005240.01.T01:CDS 40.0%
!! TGCATCAAGCTTTGAAGACA+TGG - Chr1:89027449-89027468 None:intergenic 40.0%
!! TTTTCTAGTGTGTGCATGAG+TGG - Chr1:89025138-89025157 None:intergenic 40.0%
!!! AATGGGTGCCAACTTTTTCA+GGG + Chr1:89023344-89023363 MsG0180005240.01.T01:CDS 40.0%
!!! GAGGTTTTGGACAAGTACAA+TGG + Chr1:89024713-89024732 MsG0180005240.01.T01:CDS 40.0%
AAATTCAGCCAAGCCGCATA+AGG - Chr1:89028581-89028600 None:intergenic 45.0%
AAGGAATCCAGCACCTTATG+CGG + Chr1:89028565-89028584 MsG0180005240.01.T01:CDS 45.0%
ACAAAGGCTTTGCACTAGAC+GGG + Chr1:89021559-89021578 MsG0180005240.01.T01:intron 45.0%
ACCCAATGCCTATCAAACCA+CGG - Chr1:89023111-89023130 None:intergenic 45.0%
ACTTTCTTTAGCACATGCGC+AGG + Chr1:89025622-89025641 MsG0180005240.01.T01:intron 45.0%
ATCGTATTATCACCTGGACC+TGG + Chr1:89021046-89021065 MsG0180005240.01.T01:CDS 45.0%
ATCTCTTCCCGTGGTTTGAT+AGG + Chr1:89023100-89023119 MsG0180005240.01.T01:intron 45.0%
ATGCATCTGAACCAGTTCAC+GGG + Chr1:89023156-89023175 MsG0180005240.01.T01:CDS 45.0%
CAACAGTTGCCCTTTACAGA+AGG + Chr1:89029634-89029653 MsG0180005240.01.T01:three_prime_UTR 45.0%
CATGCATCTGAACCAGTTCA+CGG + Chr1:89023155-89023174 MsG0180005240.01.T01:CDS 45.0%
CATTCTACAAGGCCACACTA+TGG + Chr1:89024859-89024878 MsG0180005240.01.T01:CDS 45.0%
CCAGATAAGGAAACCGATTG+AGG + Chr1:89028505-89028524 MsG0180005240.01.T01:CDS 45.0%
CGAGGGAGACAGTAACAAAA+AGG - Chr1:89027154-89027173 None:intergenic 45.0%
CGCACCAAAGTTGAGATCAA+TGG + Chr1:89029215-89029234 MsG0180005240.01.T01:CDS 45.0%
CTCTTGTAAATAGGACCGGA+GGG + Chr1:89025297-89025316 MsG0180005240.01.T01:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG - Chr1:89025316-89025297 None:intergenic 45.0%
GAGAAGCTTCTGAGCTTAAC+TGG + Chr1:89028317-89028336 MsG0180005240.01.T01:CDS 45.0%
GAGGAAAAGGTGGATCACTT+TGG + Chr1:89026107-89026126 MsG0180005240.01.T01:CDS 45.0%
GCAGTGAAGTTGAGCACAAT+GGG + Chr1:89023327-89023346 MsG0180005240.01.T01:intron 45.0%
GCTAGAAGCTAAGCCCATTA+AGG + Chr1:89028670-89028689 MsG0180005240.01.T01:CDS 45.0%
GCTATTGGAATGAGCACTTC+AGG - Chr1:89024656-89024675 None:intergenic 45.0%
GGATAGTTCTTCCACAGAGA+TGG + Chr1:89025817-89025836 MsG0180005240.01.T01:CDS 45.0%
GGTGGGAAACGATAGATGAT+AGG + Chr1:89026960-89026979 MsG0180005240.01.T01:intron 45.0%
GTTTCCTTATCTGGGTTGTG+AGG - Chr1:89028499-89028518 None:intergenic 45.0%
TATCACTCCTATCCAACTGC+AGG - Chr1:89028649-89028668 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG + Chr1:89025296-89025315 MsG0180005240.01.T01:intron 45.0%
TCTCTTGTAAATAGGACCGG+AGG - Chr1:89025315-89025296 None:intergenic 45.0%
TGAGGTCATACCTGCAACAT+AGG - Chr1:89028130-89028149 None:intergenic 45.0%
TGCAGTGAAGTTGAGCACAA+TGG + Chr1:89023326-89023345 MsG0180005240.01.T01:intron 45.0%
TGGGAGTCAAGCATTCTACA+AGG + Chr1:89024848-89024867 MsG0180005240.01.T01:CDS 45.0%
TGTCCTCCCTCAAAGTAAGT+TGG + Chr1:89027508-89027527 MsG0180005240.01.T01:intron 45.0%
TGTGTCAAAGCTGCATTTCC+TGG + Chr1:89029177-89029196 MsG0180005240.01.T01:CDS 45.0%
TGTTCACAAGGTCTCTTCCA+TGG - Chr1:89027550-89027569 None:intergenic 45.0%
TTCCAAGGGAAAGAGATGTC+GGG + Chr1:89024107-89024126 MsG0180005240.01.T01:intron 45.0%
TTCTAGTGTGTGCATGAGTG+GGG - Chr1:89025136-89025155 None:intergenic 45.0%
TTGAGGGAGGGCAATGAATT+TGG - Chr1:89027695-89027714 None:intergenic 45.0%
TTGATGTTGCTCCGCAATTG+TGG + Chr1:89023578-89023597 MsG0180005240.01.T01:intron 45.0%
! AAAAGCGTGCTCTTCCCTAT+CGG - Chr1:89026078-89026097 None:intergenic 45.0%
! ACAATGGGTTCTCATCTTCC+TGG + Chr1:89029586-89029605 MsG0180005240.01.T01:three_prime_UTR 45.0%
! AGAGCACGCTTTTCGTTCAT+GGG + Chr1:89026085-89026104 MsG0180005240.01.T01:CDS 45.0%
! AGGTTTGCTCAACCAGAAAG+TGG - Chr1:89022259-89022278 None:intergenic 45.0%
! AGTGATGGGAGTTCAAAAGG+TGG + Chr1:89026343-89026362 MsG0180005240.01.T01:intron 45.0%
! CAGCTGCTTTGCATCCAAAT+AGG - Chr1:89028936-89028955 None:intergenic 45.0%
! CCTCAATCGGTTTCCTTATC+TGG - Chr1:89028508-89028527 None:intergenic 45.0%
! CTGTGAGGATGGATTTGGAA+AGG + Chr1:89028342-89028361 MsG0180005240.01.T01:CDS 45.0%
! GAATATTTGACTTCCGTGGC+AGG - Chr1:89025011-89025030 None:intergenic 45.0%
! GATTTTCACGGCGGATATGT+TGG + Chr1:89027253-89027272 MsG0180005240.01.T01:CDS 45.0%
! GCGGATATGTTGGTTACATC+GGG + Chr1:89027263-89027282 MsG0180005240.01.T01:CDS 45.0%
! GGCGGATATGTTGGTTACAT+CGG + Chr1:89027262-89027281 MsG0180005240.01.T01:CDS 45.0%
! GGCTTGGCTGAATTTTCCAA+AGG + Chr1:89028586-89028605 MsG0180005240.01.T01:CDS 45.0%
! TGGTTCTGTGAGGATGGATT+TGG + Chr1:89028337-89028356 MsG0180005240.01.T01:CDS 45.0%
!! AAGAGCACGCTTTTCGTTCA+TGG + Chr1:89026084-89026103 MsG0180005240.01.T01:CDS 45.0%
!! CAATGGGTGCCAACTTTTTC+AGG + Chr1:89023343-89023362 MsG0180005240.01.T01:CDS 45.0%
!! CTTAACTGGTTCTGTGAGGA+TGG + Chr1:89028331-89028350 MsG0180005240.01.T01:CDS 45.0%
!! GTGAGGTTCGCTTTTCTAAC+AGG + Chr1:89029709-89029728 MsG0180005240.01.T01:three_prime_UTR 45.0%
!! TAGGCATTGGGTTATGTGCA+TGG + Chr1:89023119-89023138 MsG0180005240.01.T01:intron 45.0%
!! TGAGCTTAACTGGTTCTGTG+AGG + Chr1:89028327-89028346 MsG0180005240.01.T01:CDS 45.0%
!!! CTTTTTCAGGGCATACCTTC+TGG + Chr1:89023356-89023375 MsG0180005240.01.T01:CDS 45.0%
!!! GGCAGTAATTTTGGCTTGCT+GGG + Chr1:89029819-89029838 MsG0180005240.01.T01:three_prime_UTR 45.0%
!!! TCCGTCTCCTTTGTTTTAGG+AGG + Chr1:89023948-89023967 MsG0180005240.01.T01:intron 45.0%
!!! TGGCAGTAATTTTGGCTTGC+TGG + Chr1:89029818-89029837 MsG0180005240.01.T01:three_prime_UTR 45.0%
!! AAAAACATAATATTAAAAAT+TGG - Chr1:89022948-89022967 None:intergenic 5.0%
!! ATAAATAAATAAATAAAACA+CGG - Chr1:89024928-89024947 None:intergenic 5.0%
AAAGCGTGCTCTTCCCTATC+GGG - Chr1:89026077-89026096 None:intergenic 50.0%
AACACCTGCACACCATAGTG+TGG - Chr1:89024874-89024893 None:intergenic 50.0%
AACAGTCCCAGTGCATTGCA+CGG + Chr1:89027666-89027685 MsG0180005240.01.T01:intron 50.0%
AAGCTTCCATAGGAGCTGGA+GGG + Chr1:89029361-89029380 MsG0180005240.01.T01:CDS 50.0%
AATGATGGCACTGCGGAATC+TGG - Chr1:89024439-89024458 None:intergenic 50.0%
AGAGCGAGACTGTGTTAGCA+AGG - Chr1:89022410-89022429 None:intergenic 50.0%
AGAGGTTCCTGCAGTTGGAT+AGG + Chr1:89028639-89028658 MsG0180005240.01.T01:CDS 50.0%
ATAGCTGCACCAAACTCTGC+TGG + Chr1:89027468-89027487 MsG0180005240.01.T01:intron 50.0%
CAAAGGCTTTGCACTAGACG+GGG + Chr1:89021560-89021579 MsG0180005240.01.T01:intron 50.0%
CACGGGAAGAGATTAAGCCA+AGG - Chr1:89023093-89023112 None:intergenic 50.0%
CAGGATCACATACACGACCA+AGG - Chr1:89029050-89029069 None:intergenic 50.0%
CATGAGGGTGAAGCTTCCAT+AGG + Chr1:89029351-89029370 MsG0180005240.01.T01:CDS 50.0%
CCCAATGCCTATCAAACCAC+GGG - Chr1:89023110-89023129 None:intergenic 50.0%
CCCGTGGTTTGATAGGCATT+GGG + Chr1:89023107-89023126 MsG0180005240.01.T01:intron 50.0%
CCTATATCTTCTGGGCATGC+CGG - Chr1:89021076-89021095 None:intergenic 50.0%
CCTATTCTGGGTGTTTGCCT+CGG + Chr1:89022173-89022192 MsG0180005240.01.T01:CDS 50.0%
CGCTGCTATCAGGTGTATCA+GGG - Chr1:89021344-89021363 None:intergenic 50.0%
CTTGGCTTAATCTCTTCCCG+TGG + Chr1:89023091-89023110 MsG0180005240.01.T01:intron 50.0%
CTTGGTCGTGTATGTGATCC+TGG + Chr1:89029048-89029067 MsG0180005240.01.T01:CDS 50.0%
GAACTTCCGTTTCCTGCTTC+AGG - Chr1:89024785-89024804 None:intergenic 50.0%
GAATGTAAAGGGACAGGCCA+TGG + Chr1:89027530-89027549 MsG0180005240.01.T01:intron 50.0%
GAGTGGGGAACACAGTTCTT+CGG - Chr1:89025121-89025140 None:intergenic 50.0%
GATGGGAGTTCAAAAGGTGG+TGG + Chr1:89026346-89026365 MsG0180005240.01.T01:CDS 50.0%
GGAAGGGATGCATCACATAG+TGG + Chr1:89024144-89024163 MsG0180005240.01.T01:intron 50.0%
GGTGGTTCGATATCATTCGC+TGG + Chr1:89024610-89024629 MsG0180005240.01.T01:intron 50.0%
GTCAAAGCTGCATTTCCTGG+TGG + Chr1:89029180-89029199 MsG0180005240.01.T01:CDS 50.0%
TCCCGTGGTTTGATAGGCAT+TGG + Chr1:89023106-89023125 MsG0180005240.01.T01:intron 50.0%
TCGTTCATGGGAGGAAAAGG+TGG + Chr1:89026097-89026116 MsG0180005240.01.T01:CDS 50.0%
TGCCCTCCCTCAAAGTAAGT+TGG + Chr1:89027702-89027721 MsG0180005240.01.T01:intron 50.0%
TGGAACCTGTGCAATGCACT+GGG - Chr1:89027675-89027694 None:intergenic 50.0%
TGTCTGACCATGGGCCAAAA+AGG - Chr1:89029509-89029528 None:intergenic 50.0%
TGTGCCTCACAACCCAGATA+AGG + Chr1:89028492-89028511 MsG0180005240.01.T01:CDS 50.0%
TTGGAACCTGTGCAATGCAC+TGG - Chr1:89027676-89027695 None:intergenic 50.0%
TTTCCTGGTGGTTCGATGAC+AGG + Chr1:89029192-89029211 MsG0180005240.01.T01:CDS 50.0%
! AGGTGGTGGCCATTTATCAC+TGG + Chr1:89026360-89026379 MsG0180005240.01.T01:CDS 50.0%
! CGTGAACTGGTTCAGATGCA+TGG - Chr1:89023157-89023176 None:intergenic 50.0%
! TGCGAAACCAGCCTTATGTG+AGG - Chr1:89028393-89028412 None:intergenic 50.0%
! TGTTCTCGAGGCATCTACTC+AGG + Chr1:89029261-89029280 MsG0180005240.01.T01:CDS 50.0%
! TGTTGGTTACATCGGGTAGG+TGG + Chr1:89027270-89027289 MsG0180005240.01.T01:intron 50.0%
!! CGTTCAGGTTGTCTGATCAG+AGG + Chr1:89026140-89026159 MsG0180005240.01.T01:CDS 50.0%
!! GGTGGCTTGATAGTGAGGAA+GGG + Chr1:89024128-89024147 MsG0180005240.01.T01:intron 50.0%
!! TATAGCTCGTGGTGCTACTG+AGG + Chr1:89028697-89028716 MsG0180005240.01.T01:CDS 50.0%
!! TTTGCTGTTCTTCCCCTGAG+AGG + Chr1:89028621-89028640 MsG0180005240.01.T01:CDS 50.0%
!!! GGCTTGCTGGGTTTTGTTTC+TGG + Chr1:89029831-89029850 MsG0180005240.01.T01:three_prime_UTR 50.0%
AAGGCCACACTATGGTGTGC+AGG + Chr1:89024867-89024886 MsG0180005240.01.T01:intron 55.0%
AATTGCCCCTCCAGCTCCTA+TGG - Chr1:89029370-89029389 None:intergenic 55.0%
ACACTTCTTACCTAGCCCCC+AGG + Chr1:89026496-89026515 MsG0180005240.01.T01:intron 55.0%
ACAGTCCCAGTGCATTGCAC+AGG + Chr1:89027667-89027686 MsG0180005240.01.T01:intron 55.0%
ACAGTCCCAGTGCATTGCAC+GGG + Chr1:89027667-89027686 MsG0180005240.01.T01:intron 55.0%
AGCTTCCATAGGAGCTGGAG+GGG + Chr1:89029362-89029381 MsG0180005240.01.T01:CDS 55.0%
AGGGAAATACCTGGTGTCCG+AGG - Chr1:89022193-89022212 None:intergenic 55.0%
ATACACCTGATAGCAGCGCG+TGG + Chr1:89021346-89021365 MsG0180005240.01.T01:intron 55.0%
ATATGCATGTCCTGGGGGCT+AGG - Chr1:89026509-89026528 None:intergenic 55.0%
ATCCAGCACCTTATGCGGCT+TGG + Chr1:89028570-89028589 MsG0180005240.01.T01:CDS 55.0%
ATGGAACCCGTGCAATGCAC+TGG - Chr1:89028059-89028078 None:intergenic 55.0%
CAACTGCAGGAACCTCTCAG+GGG - Chr1:89028636-89028655 None:intergenic 55.0%
CAAGGGAAAGAGATGTCGGG+TGG + Chr1:89024110-89024129 MsG0180005240.01.T01:intron 55.0%
CACCCGACATCTCTTTCCCT+TGG - Chr1:89024112-89024131 None:intergenic 55.0%
CAGCGCGTGGCTCAAGAAAT+AGG + Chr1:89021359-89021378 MsG0180005240.01.T01:intron 55.0%
CCAACTGCAGGAACCTCTCA+GGG - Chr1:89028637-89028656 None:intergenic 55.0%
CCGAGGCAAACACCCAGAAT+AGG - Chr1:89022176-89022195 None:intergenic 55.0%
CCGGCATGCCCAGAAGATAT+AGG + Chr1:89021073-89021092 MsG0180005240.01.T01:CDS 55.0%
GAAGCTTCCATAGGAGCTGG+AGG + Chr1:89029360-89029379 MsG0180005240.01.T01:CDS 55.0%
GATCACTTGGCTGGGCAAGT+TGG + Chr1:89025734-89025753 MsG0180005240.01.T01:CDS 55.0%
GCGCTGCTATCAGGTGTATC+AGG - Chr1:89021345-89021364 None:intergenic 55.0%
GGCATCTACTCAGGCTGCAT+TGG + Chr1:89029270-89029289 MsG0180005240.01.T01:CDS 55.0%
GGTGAAGCTTCCATAGGAGC+TGG + Chr1:89029357-89029376 MsG0180005240.01.T01:CDS 55.0%
TCCAACTGCAGGAACCTCTC+AGG - Chr1:89028638-89028657 None:intergenic 55.0%
TGAATCACCACAGGAGGGAC+TGG - Chr1:89020962-89020981 None:intergenic 55.0%
TGGAACCCGTGCAATGCACT+GGG - Chr1:89028058-89028077 None:intergenic 55.0%
TGGCAGGTTGCAACACTCTC+TGG - Chr1:89024995-89025014 None:intergenic 55.0%
TGTTGACGTGCCGCATCTCA+TGG + Chr1:89029074-89029093 MsG0180005240.01.T01:CDS 55.0%
! ATCACCTGGACCTGGTTCTC+CGG + Chr1:89021054-89021073 MsG0180005240.01.T01:CDS 55.0%
! CATTTTGCCAGTCCCTCCTG+TGG + Chr1:89020952-89020971 MsG0180005240.01.T01:CDS 55.0%
! GCACGCTTTTCGTTCATGGG+AGG + Chr1:89026088-89026107 MsG0180005240.01.T01:CDS 55.0%
! GCTGATTGGCCAGCAGAGTT+TGG - Chr1:89027480-89027499 None:intergenic 55.0%
!! GAGAGTGTTGCAACCTGCCA+CGG + Chr1:89024995-89025014 MsG0180005240.01.T01:intron 55.0%
!! GGGTGGCTTGATAGTGAGGA+AGG + Chr1:89024127-89024146 MsG0180005240.01.T01:intron 55.0%
!! TGTCGGGTGGCTTGATAGTG+AGG + Chr1:89024123-89024142 MsG0180005240.01.T01:intron 55.0%
AACCAGTTCACGGGCGTCTG+AGG + Chr1:89023165-89023184 MsG0180005240.01.T01:CDS 60.0%
AGCCAAGCCGCATAAGGTGC+TGG - Chr1:89028575-89028594 None:intergenic 60.0%
CCCTGAGAGGTTCCTGCAGT+TGG + Chr1:89028634-89028653 MsG0180005240.01.T01:CDS 60.0%
TACCTCAGACGCCCGTGAAC+TGG - Chr1:89023170-89023189 None:intergenic 60.0%
TGCGGCACGTCAACAGATCC+AGG - Chr1:89029069-89029088 None:intergenic 60.0%
TTGAGCCACGCGCTGCTATC+AGG - Chr1:89021354-89021373 None:intergenic 60.0%
! CACTTGGCTGGGCAAGTTGG+TGG + Chr1:89025737-89025756 MsG0180005240.01.T01:CDS 60.0%
!! AGCTCGTGGTGCTACTGAGG+AGG + Chr1:89028700-89028719 MsG0180005240.01.T01:CDS 60.0%
CATGCCGGAGAACCAGGTCC+AGG - Chr1:89021061-89021080 None:intergenic 65.0%
GCGCCTGTCATCGAACCACC+AGG - Chr1:89029198-89029217 None:intergenic 65.0%
GGGTGTTTGCCTCGGACACC+AGG + Chr1:89022181-89022200 MsG0180005240.01.T01:CDS 65.0%
TCTGGGCATGCCGGAGAACC+AGG - Chr1:89021067-89021086 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 89020923 89029913 89020923 ID=MsG0180005240.01;Name=MsG0180005240.01
Chr1 mRNA 89020923 89029913 89020923 ID=MsG0180005240.01.T01;Parent=MsG0180005240.01;Name=MsG0180005240.01.T01;_AED=0.38;_eAED=0.39;_QI=0|0.5|0.45|1|1|1|11|437|733
Chr1 exon 89020923 89021094 89020923 ID=MsG0180005240.01.T01:exon:14443;Parent=MsG0180005240.01.T01
Chr1 exon 89022135 89022202 89022135 ID=MsG0180005240.01.T01:exon:14444;Parent=MsG0180005240.01.T01
Chr1 exon 89023122 89023186 89023122 ID=MsG0180005240.01.T01:exon:14445;Parent=MsG0180005240.01.T01
Chr1 exon 89023331 89023397 89023331 ID=MsG0180005240.01.T01:exon:14446;Parent=MsG0180005240.01.T01
Chr1 exon 89024611 89024880 89024611 ID=MsG0180005240.01.T01:exon:14447;Parent=MsG0180005240.01.T01
Chr1 exon 89025644 89025838 89025644 ID=MsG0180005240.01.T01:exon:14448;Parent=MsG0180005240.01.T01
Chr1 exon 89026082 89026161 89026082 ID=MsG0180005240.01.T01:exon:14449;Parent=MsG0180005240.01.T01
Chr1 exon 89026345 89026447 89026345 ID=MsG0180005240.01.T01:exon:14450;Parent=MsG0180005240.01.T01
Chr1 exon 89027202 89027284 89027202 ID=MsG0180005240.01.T01:exon:14451;Parent=MsG0180005240.01.T01
Chr1 exon 89028139 89028756 89028139 ID=MsG0180005240.01.T01:exon:14452;Parent=MsG0180005240.01.T01
Chr1 exon 89028996 89029913 89028996 ID=MsG0180005240.01.T01:exon:14453;Parent=MsG0180005240.01.T01
Chr1 CDS 89020923 89021094 89020923 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89022135 89022202 89022135 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89023122 89023186 89023122 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89023331 89023397 89023331 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89024611 89024880 89024611 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89025644 89025838 89025644 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89026082 89026161 89026082 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89026345 89026447 89026345 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89027202 89027284 89027202 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89028139 89028756 89028139 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 CDS 89028996 89029476 89028996 ID=MsG0180005240.01.T01:cds;Parent=MsG0180005240.01.T01
Chr1 three_prime_UTR 89029477 89029913 89029477 ID=MsG0180005240.01.T01:three_prime_utr;Parent=MsG0180005240.01.T01
Gene Sequence

>MsG0180005240.01.T01

ATGTCCCTTTTAAAAGCTGGTTTGGTTTTCATTTTGCCAGTCCCTCCTGTGGTGATTCAAAATGATGATTGGACGTGGGACGAACTTTGCTATTACTTGTACGAAGAAAATGCATTTGATAACATCGTATTATCACCTGGACCTGGTTCTCCGGCATGCCCAGAAGATATAGGTATTTGTCTTCAAATATTGCGTGAATGCAGGGATATTCCTATTCTGGGTGTTTGCCTCGGACACCAGGCATTGGGTTATGTGCATGGAGCTCAAGTTGTCCATGCATCTGAACCAGTTCACGGGCGTCTGAGTGAAGTTGAGCACAATGGGTGCCAACTTTTTCAGGGCATACCTTCTGGTAGAAATTCTGGTTTCAAGGTGGTTCGATATCATTCGCTGGTGATAGATTCTGAATCGCTTCCTGAAGTGCTCATTCCAATAGCATGGACTTCAAATAGGACACTTCCATTTATTGGATCCGAGGTTTTGGACAAGTACAATGGTCATGAACTTCAGACTGATCAAAGCATTTTCCTTGATTCATTTTTGCCTGAAGCAGGAAACGGAAGTTCAAGCCTTGTTGACTATGGACAAACTAGAAATGCAGGGTTCTTATGGGAGTCAAGCATTCTACAAGGCCACACTATGGTTTCAAGTGCTAGTAGACTCTACAGACATTTAGTACATAATAATACTGAGGTGAACTACAAAACTTTGAAGTTGAAATGGAGGAAATTTGATCACTTGGCTGGGCAAGTTGGTGGAGCAAAAAGTATATTCTGTCAGTTGTTTGGACAGGAAGCTGAAAACACCTTTTGGTTGGATAGTTCTTCCACAGAGATGGGAAGAGCACGCTTTTCGTTCATGGGAGGAAAAGGTGGATCACTTTGGAAGCAGTTAACGTTCAGGTTGTCTGATCAGAGTGATGGGAGTTCAAAAGGTGGTGGCCATTTATCACTGGAAGATTCTGAAGGTTCTGTCAAAACAATATTCTTGGAAGGAGGTTTTCTTGATTATTTGAACAAGGAGCTTCAATCATATCGTTATGATAAGGATGAATATGAAGGTCTACCATTTGATTTTCACGGCGGATATGTTGGTTACATCGGGTATGACCTCAAAGTTGAATGTGGTGTCACATGTAACCATCACAAATCTAAAACTCCAGATGCATGTTTTTTCTTTGCTGATAATCTTGTTGCTATTGATCACAAAAATGATGATGTTTATTTATTGGCTATACATGAAGAAAGTTCAAGTATTTCACAATGGTTGGATGATACTGAGGAGAAGCTTCTGAGCTTAACTGGTTCTGTGAGGATGGATTTGGAAAGGCAGTACTCTCATCCTTCAACTTTTTCCTCACATAAGGCTGGTTTCGCAGCTGAAAAATCTAAAGAGCAGTACCTTAGAGATGTTAAGAAGTGTCTAAACTATATTAGAGATGGAGAGAGCTATGAGTTGTGCCTCACAACCCAGATAAGGAAACCGATTGAGGTATTAAATTCTCTTGGACTTTACCTACATTTAAGAGAAAGGAATCCAGCACCTTATGCGGCTTGGCTGAATTTTCCAAAGGAAGATCTGTGTATTTGCTGTTCTTCCCCTGAGAGGTTCCTGCAGTTGGATAGGAGTGATATGCTAGAAGCTAAGCCCATTAAGGGTACTATAGCTCGTGGTGCTACTGAGGAGGAAGACAAACAACTCAAATTGAAATTACAGCTCAGTGAAAAGGATCAGGCGGAAAACCTGATGATTGTTGACCTTCTAAGAAATGACCTTGGTCGTGTATGTGATCCTGGATCTGTTGACGTGCCGCATCTCATGGAAGTACAATCATATGCAACTGTTCACACAATGGTGAGTACAATTCGTGGGAAAAAGAGGTCAGATATAAGTGCTGTAGACTGTGTCAAAGCTGCATTTCCTGGTGGTTCGATGACAGGCGCACCAAAGTTGAGATCAATGGAACTTCTTGATTCTCTTGAAAGTTGTTCTCGAGGCATCTACTCAGGCTGCATTGGATTTTTCTCATATAATCAAACATTTGATCTAAATATTGTCATAAGAACAGTTGTTATACATGAGGGTGAAGCTTCCATAGGAGCTGGAGGGGCAATTGTTGCTCTGTCAAACCCAGAAGACGAATACGAAGAGATGATCTTGAAAACAAAAGCACCAGCAAACACTGTGATAGATTATGAATAG

Protein sequence

>MsG0180005240.01.T01

MSLLKAGLVFILPVPPVVIQNDDWTWDELCYYLYEENAFDNIVLSPGPGSPACPEDIGICLQILRECRDIPILGVCLGHQALGYVHGAQVVHASEPVHGRLSEVEHNGCQLFQGIPSGRNSGFKVVRYHSLVIDSESLPEVLIPIAWTSNRTLPFIGSEVLDKYNGHELQTDQSIFLDSFLPEAGNGSSSLVDYGQTRNAGFLWESSILQGHTMVSSASRLYRHLVHNNTEVNYKTLKLKWRKFDHLAGQVGGAKSIFCQLFGQEAENTFWLDSSSTEMGRARFSFMGGKGGSLWKQLTFRLSDQSDGSSKGGGHLSLEDSEGSVKTIFLEGGFLDYLNKELQSYRYDKDEYEGLPFDFHGGYVGYIGYDLKVECGVTCNHHKSKTPDACFFFADNLVAIDHKNDDVYLLAIHEESSSISQWLDDTEEKLLSLTGSVRMDLERQYSHPSTFSSHKAGFAAEKSKEQYLRDVKKCLNYIRDGESYELCLTTQIRKPIEVLNSLGLYLHLRERNPAPYAAWLNFPKEDLCICCSSPERFLQLDRSDMLEAKPIKGTIARGATEEEDKQLKLKLQLSEKDQAENLMIVDLLRNDLGRVCDPGSVDVPHLMEVQSYATVHTMVSTIRGKKRSDISAVDCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIHEGEASIGAGGAIVALSNPEDEYEEMILKTKAPANTVIDYE*