AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043887.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043887.01.T01 MTR_8g043760 74.896 721 64 9 1 604 1 721 0.0 1018
MsG0880043887.01.T01 MTR_5g037070 60.559 715 110 12 3 594 1 666 0.0 764
MsG0880043887.01.T01 MTR_4g080580 35.428 573 285 12 3 494 1 569 7.37e-108 342
MsG0880043887.01.T01 MTR_3g108220 32.432 555 274 9 6 487 1 527 2.75e-97 308
MsG0880043887.01.T01 MTR_8g043560 62.449 245 13 3 369 576 61 263 4.90e-83 266
MsG0880043887.01.T01 MTR_7g082990 64.103 78 27 1 211 287 29 106 4.65e-28 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043887.01.T01 AT1G60560 55.602 714 189 12 3 599 1 703 0.0 735
MsG0880043887.01.T01 AT1G60560 58.400 500 128 9 3 422 1 500 0.0 551
MsG0880043887.01.T01 AT1G60560 64.987 377 87 5 3 334 1 377 2.40e-171 495
MsG0880043887.01.T01 AT4G13970 40.741 378 178 4 3 334 1 378 2.79e-89 293
MsG0880043887.01.T01 AT4G13970 46.734 199 105 1 137 334 4 202 6.06e-55 197

Find 118 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTCAGACCCTTTCATCTT+AGG 0.173220 8:+32161046 MsG0880043887.01.T01:CDS
TATAACCTTCTTTCACATTC+TGG 0.214883 8:-32164176 None:intergenic
CAACTCTATCATAAGGAATA+AGG 0.217668 8:-32159277 None:intergenic
TGAAGATCGTTTGCCAATAT+TGG 0.233970 8:-32164640 None:intergenic
GCAACTCAGTTGTTAACTTA+TGG 0.236095 8:-32164107 None:intergenic
CTAATGCTCCAGAGGCTTCC+TGG 0.257802 8:-32164005 None:intergenic
TCAATTTCGGCAACTCCTTC+TGG 0.290502 8:+32164660 MsG0880043887.01.T01:CDS
CTGAATAATTCAACTAATAT+TGG 0.292288 8:+32164567 MsG0880043887.01.T01:CDS
TGAATTTCATTACATATATA+TGG 0.301917 8:-32160779 None:intergenic
GACTTGACTTGGACTAAGTT+TGG 0.301991 8:+32159227 MsG0880043887.01.T01:CDS
GTCTACTCATGAGCTGGATT+TGG 0.314206 8:+32160952 MsG0880043887.01.T01:CDS
CAAAGCCTGATGTGTCTAAA+TGG 0.318755 8:+32161361 MsG0880043887.01.T01:CDS
TAAACAATATGCCTCTGAAA+TGG 0.327119 8:+32164598 MsG0880043887.01.T01:CDS
AGGCTATTGACTTGTGCATT+TGG 0.358551 8:-32160887 None:intergenic
TTTGAATTTGATCTAGCATT+TGG 0.360298 8:-32164533 None:intergenic
TGGCAAACGATCTTCAATTT+CGG 0.361508 8:+32164647 MsG0880043887.01.T01:CDS
GTTGCAGCTGCCATTCTGTT+TGG 0.371205 8:-32161072 None:intergenic
CTGGCAAGCCAGGAAGCCTC+TGG 0.378836 8:+32163997 MsG0880043887.01.T01:CDS
AAGAAACGCAGAACCAATAT+TGG 0.379365 8:+32164627 MsG0880043887.01.T01:CDS
GTTTGCGTTGGACTTGTCAT+TGG 0.379996 8:+32164500 MsG0880043887.01.T01:CDS
ACTTGACTTGGACTAAGTTT+GGG 0.380290 8:+32159228 MsG0880043887.01.T01:CDS
CTGCAACAAATGGTTCGTTT+TGG 0.384256 8:+32161088 MsG0880043887.01.T01:CDS
CGTTGGACTTGTCATTGGCT+TGG 0.407304 8:+32164505 MsG0880043887.01.T01:CDS
AAACAATGTCCATGATATAT+CGG 0.414794 8:+32160807 MsG0880043887.01.T01:CDS
AACTCTATCATAAGGAATAA+GGG 0.419590 8:-32159276 None:intergenic
TTTCTGCTGCTGACTTGACT+TGG 0.421877 8:+32159216 MsG0880043887.01.T01:CDS
AGGCGTCATGTTAATACGTC+TGG 0.425938 8:+32160698 MsG0880043887.01.T01:CDS
AACGCAAACGAATCGTCAAC+TGG 0.430046 8:-32164486 None:intergenic
AGTCAGACCCTTTCATCTTA+GGG 0.430987 8:+32161047 MsG0880043887.01.T01:CDS
ATCATCCTTATACTCCTTCA+AGG 0.435511 8:-32159382 None:intergenic
TTCTCAGTATGTTCACAAGC+TGG 0.439459 8:+32160913 MsG0880043887.01.T01:CDS
AAATGTGCCACTGGCAAGCC+AGG 0.441901 8:+32163987 MsG0880043887.01.T01:CDS
TCCAAGGTGACCGCAGAGTC+GGG 0.444917 8:-32164234 None:intergenic
AAACCAGGATATGTAGTTGC+TGG 0.446911 8:-32163853 None:intergenic
TTAAGCCATTTAGACACATC+AGG 0.452483 8:-32161366 None:intergenic
AAAGCATCAACTCTATCATA+AGG 0.460556 8:-32159284 None:intergenic
TTCTGAATGCCGATATATCA+TGG 0.466912 8:-32160816 None:intergenic
GAATTTGATCTAGCATTTGG+TGG 0.469172 8:-32164530 None:intergenic
AAACAATATGCCTCTGAAAT+GGG 0.473142 8:+32164599 MsG0880043887.01.T01:CDS
GGCAACCTCATCATAATGTT+CGG 0.476675 8:-32159255 None:intergenic
AGAGGAAGGAAACGGACTAT+TGG 0.478721 8:+32159357 MsG0880043887.01.T01:CDS
TGGTTGAACCTTTATGGAGA+TGG 0.481428 8:+32159139 None:intergenic
CTGAGTTGCATTCAAGCTAC+TGG 0.483298 8:+32164121 MsG0880043887.01.T01:CDS
GTTGCTGCAGACTCATCGTT+TGG 0.485294 8:+32161124 MsG0880043887.01.T01:CDS
AATTTGATCTAGCATTTGGT+GGG 0.487552 8:-32164529 None:intergenic
TGCTAGACCTCAATCAATGC+GGG 0.487955 8:+32160605 MsG0880043887.01.T01:intron
CTCGTAGTGTTGAGCCTGGA+TGG 0.491528 8:+32161406 MsG0880043887.01.T01:CDS
TCCTCTGTTGTGCAGAAATG+TGG 0.493986 8:+32163950 MsG0880043887.01.T01:CDS
GCAGAAAACTCTTCCTCAGA+TGG 0.496981 8:-32159200 None:intergenic
ACGGACTATTGGTACCTTGA+AGG 0.502644 8:+32159368 MsG0880043887.01.T01:CDS
CCACTTGATAGAGATGCTAT+TGG 0.502938 8:+32160737 MsG0880043887.01.T01:CDS
CAAAAGGTCTACTCATGAGC+TGG 0.506029 8:+32160946 MsG0880043887.01.T01:CDS
GCATTCAGAAGAGAATATCT+TGG 0.508630 8:+32160829 MsG0880043887.01.T01:CDS
TCTTTCCAGAATGTGAAAGA+AGG 0.512792 8:+32164171 MsG0880043887.01.T01:CDS
TGCTCGCAACTTTGGCAAAG+AGG 0.516651 8:-32164269 None:intergenic
GGCTTTCAGTTTAACATGGT+AGG 0.519261 8:-32164031 None:intergenic
GAGCGCTGCAAAGAGTAGAT+TGG 0.520110 8:+32164079 MsG0880043887.01.T01:CDS
GTTTGGATCCCTAAGATGAA+AGG 0.520145 8:-32161055 None:intergenic
AGAATGGCAGCTGCAACAAA+TGG 0.522227 8:+32161078 MsG0880043887.01.T01:CDS
TTGTTGTGTATAAGAAGAAT+CGG 0.524032 8:+32164703 MsG0880043887.01.T01:CDS
TTTGGATCCCTAAGATGAAA+GGG 0.526445 8:-32161054 None:intergenic
AGCTGGGCATGATTATCAAA+AGG 0.527348 8:+32160930 MsG0880043887.01.T01:CDS
TCCCGACTCTGCGGTCACCT+TGG 0.527575 8:+32164233 MsG0880043887.01.T01:CDS
TGGCTATAGTTGAATCAGTA+AGG 0.538967 8:+32159159 MsG0880043887.01.T01:CDS
TCCTCAGATGGGTCTTGCAA+AGG 0.541517 8:-32159188 None:intergenic
GATAGAGATGCTATTGGCCC+AGG 0.541655 8:+32160743 MsG0880043887.01.T01:CDS
CGAATGTGTTGTGTCCGACT+CGG 0.542403 8:+32159324 MsG0880043887.01.T01:CDS
GAGGCTTCCTGGCTTGCCAG+TGG 0.542762 8:-32163994 None:intergenic
AACAATGAGAAATGTGCCAC+TGG 0.543148 8:+32163978 MsG0880043887.01.T01:CDS
GTCCAAGGTGACCGCAGAGT+CGG 0.545370 8:-32164235 None:intergenic
GACGTTGACAACAAAATGAC+AGG 0.549748 8:-32160634 None:intergenic
GTACAACCCCGCATTGATTG+AGG 0.553008 8:-32160612 None:intergenic
GTGCCAGCAACTACATATCC+TGG 0.553803 8:+32163850 MsG0880043887.01.T01:intron
CGAGCTCGTAGTGTTGAGCC+TGG 0.555154 8:+32161402 MsG0880043887.01.T01:CDS
GTTATATTGCTTCTACGTCA+TGG 0.555768 8:+32164193 MsG0880043887.01.T01:CDS
CGTGTAATGATCCATGCGAC+AGG 0.557827 8:-32161330 None:intergenic
TTCTTTGAAACCCATTTCAG+AGG 0.558546 8:-32164609 None:intergenic
TCTCAGTATGTTCACAAGCT+GGG 0.558885 8:+32160914 MsG0880043887.01.T01:CDS
AACATGCACTTCCTGTCGCA+TGG 0.559400 8:+32161319 MsG0880043887.01.T01:CDS
CTGCACAACAGAGGAAAGGA+AGG 0.570506 8:-32163942 None:intergenic
CAGAAAACTCTTCCTCAGAT+GGG 0.571289 8:-32159199 None:intergenic
CATCTCTATCAAGTGGTCCA+TGG 0.572546 8:-32160730 None:intergenic
CAGGCTCAACACTACGAGCT+CGG 0.574462 8:-32161401 None:intergenic
TCATATCGAGAGGAAGGAAA+CGG 0.577660 8:+32159349 MsG0880043887.01.T01:CDS
AGTTGACGATTCGTTTGCGT+TGG 0.578440 8:+32164488 MsG0880043887.01.T01:CDS
TCTTGGAGAAACATATCGAA+GGG 0.580818 8:+32160846 MsG0880043887.01.T01:CDS
GAAGGGATTGAGCGATATTG+TGG 0.582808 8:+32160863 MsG0880043887.01.T01:CDS
AGTCGGGAATTTCAAGTGCT+CGG 0.584068 8:-32164218 None:intergenic
AATCCACTGACTTTCCATCC+AGG 0.586823 8:-32161420 None:intergenic
TCGGTTTCATATCGAGAGGA+AGG 0.588997 8:+32159343 MsG0880043887.01.T01:CDS
AACAGAGGAAAGGAAGGGTA+AGG 0.589422 8:-32163936 None:intergenic
TATATAATAAGTGCAAGTGA+TGG 0.591768 8:-32160668 None:intergenic
CACTTATTATATACAATGAG+AGG 0.595812 8:+32160678 MsG0880043887.01.T01:CDS
TCTTAGGGATCCAAACAGAA+TGG 0.598757 8:+32161062 MsG0880043887.01.T01:CDS
GTAGGCTTCTAATGCTCCAG+AGG 0.615309 8:-32164013 None:intergenic
TATTTCGTTCAAACCACATG+CGG 0.617604 8:-32160991 None:intergenic
ATCTTGGAGAAACATATCGA+AGG 0.622305 8:+32160845 MsG0880043887.01.T01:CDS
TCGCAACTTTGGCAAAGAGG+CGG 0.628348 8:-32164266 None:intergenic
TCCTTTGCAAGACCCATCTG+AGG 0.629277 8:+32159187 MsG0880043887.01.T01:CDS
TTCGTGTTACGGTTACCAGA+AGG 0.630622 8:-32164675 None:intergenic
GTTTGGCTTTCAGTTTAACA+TGG 0.637960 8:-32164035 None:intergenic
CCAATAGCATCTCTATCAAG+TGG 0.639002 8:-32160737 None:intergenic
ATCAAGCTAGCATCCGCATG+TGG 0.640854 8:+32160978 MsG0880043887.01.T01:CDS
TTCTTAAGCAAAATGAAACC+AGG 0.647250 8:-32163868 None:intergenic
ATTTCTGCACAACAGAGGAA+AGG 0.650859 8:-32163946 None:intergenic
CTCTCGATATGAAACCGAGT+CGG 0.654226 8:-32159338 None:intergenic
GCCACATTTCTGCACAACAG+AGG 0.667699 8:-32163951 None:intergenic
TGTATAAGAAGAATCGGAGG+CGG 0.671482 8:+32164709 MsG0880043887.01.T01:CDS
CTGCTAGACCTCAATCAATG+CGG 0.672333 8:+32160604 MsG0880043887.01.T01:intron
TGCACAACAGAGGAAAGGAA+GGG 0.679233 8:-32163941 None:intergenic
TGTGAACATACTGAGAAGCA+AGG 0.684133 8:-32160907 None:intergenic
ACTTGAAATTCCCGACTCTG+CGG 0.684327 8:+32164224 MsG0880043887.01.T01:CDS
CGACTCGGTTTCATATCGAG+AGG 0.687235 8:+32159339 MsG0880043887.01.T01:CDS
GCTAGACCTCAATCAATGCG+GGG 0.688131 8:+32160606 MsG0880043887.01.T01:intron
AAAACAAGTAGCGTGAACAA+GGG 0.688139 8:-32161285 None:intergenic
GAGCCTGGATGGAAAGTCAG+TGG 0.689150 8:+32161417 MsG0880043887.01.T01:CDS
TTGTGTATAAGAAGAATCGG+AGG 0.709540 8:+32164706 MsG0880043887.01.T01:CDS
GAATGCCGAACATTATGATG+AGG 0.726499 8:+32159250 MsG0880043887.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGTTATATTACTAT+AGG - Chr8:32163744-32163763 None:intergenic 10.0%
!! AAAATTAGTTAGATTAAAAA+AGG + Chr8:32162223-32162242 MsG0880043887.01.T01:intron 10.0%
!! AAATTAGTTAGATTAAAAAA+GGG + Chr8:32162224-32162243 MsG0880043887.01.T01:intron 10.0%
!! AGTGTTAATATTAATAATAA+AGG + Chr8:32163288-32163307 MsG0880043887.01.T01:intron 10.0%
!! TTTATAGTAATATATTAATG+AGG + Chr8:32162919-32162938 MsG0880043887.01.T01:intron 10.0%
!!! AATGATCATTTTTATAATAA+TGG + Chr8:32162942-32162961 MsG0880043887.01.T01:intron 10.0%
!!! AGATATATTATTATTTTAAG+GGG - Chr8:32162849-32162868 None:intergenic 10.0%
!! AAAAAATAATAAATGTCTAG+GGG + Chr8:32162749-32162768 MsG0880043887.01.T01:intron 15.0%
!! AATATTAATAATAAAGGTGA+AGG + Chr8:32163294-32163313 MsG0880043887.01.T01:intron 15.0%
!! GAAAAAATAATAAATGTCTA+GGG + Chr8:32162748-32162767 MsG0880043887.01.T01:intron 15.0%
!! TGAAAAAATAATAAATGTCT+AGG + Chr8:32162747-32162766 MsG0880043887.01.T01:intron 15.0%
!! TGAATTTCATTACATATATA+TGG - Chr8:32160782-32160801 None:intergenic 15.0%
!! TTAAAATTCAAGATACAATA+AGG - Chr8:32163799-32163818 None:intergenic 15.0%
!!! AGTTTTTTATTAATGTATCA+AGG + Chr8:32163767-32163786 MsG0880043887.01.T01:intron 15.0%
!! AAAAATAATAAATGTCTAGG+GGG + Chr8:32162750-32162769 MsG0880043887.01.T01:intron 20.0%
!! AAAAGTTATATTACTATAGG+TGG - Chr8:32163741-32163760 None:intergenic 20.0%
!! AACAAAAAAAAAAATGCTGA+CGG + Chr8:32163422-32163441 MsG0880043887.01.T01:intron 20.0%
!! AAGAATCAAAATTTCTACAA+GGG - Chr8:32159637-32159656 None:intergenic 20.0%
!! AATATTCCAAGAAATCAATT+TGG - Chr8:32161760-32161779 None:intergenic 20.0%
!! AATTATCAGACTATCAATAT+CGG + Chr8:32161901-32161920 MsG0880043887.01.T01:intron 20.0%
!! ATCATAATAACTTAGAGTAA+AGG - Chr8:32159452-32159471 None:intergenic 20.0%
!! ATTAAATCAAATTCAGATAG+TGG + Chr8:32163224-32163243 MsG0880043887.01.T01:intron 20.0%
!! CTGAATAATTCAACTAATAT+TGG + Chr8:32164567-32164586 MsG0880043887.01.T01:CDS 20.0%
!! TATGATATGATAGAACATTA+TGG + Chr8:32159824-32159843 MsG0880043887.01.T01:intron 20.0%
!! TCATAATAACTTAGAGTAAA+GGG - Chr8:32159451-32159470 None:intergenic 20.0%
!!! AAAATAGTTCTGATATTTCT+AGG - Chr8:32161962-32161981 None:intergenic 20.0%
!!! AAAATCTGTATTTTTTCATC+AGG + Chr8:32161015-32161034 MsG0880043887.01.T01:CDS 20.0%
!!! AATTTTGATTCTTGTTAACT+CGG + Chr8:32159644-32159663 MsG0880043887.01.T01:intron 20.0%
!!! ACATATATATGGAATCTTTT+TGG - Chr8:32160771-32160790 None:intergenic 20.0%
!!! ATGATCAAGTTTTACTTTTT+TGG + Chr8:32159467-32159486 MsG0880043887.01.T01:intron 20.0%
!!! CAAGGATATAATTTTCTAAA+CGG - Chr8:32160111-32160130 None:intergenic 20.0%
!!! CATAAGACAAAATTTTAACA+AGG - Chr8:32160129-32160148 None:intergenic 20.0%
!!! CTTGTTAAAATTTTGTCTTA+TGG + Chr8:32160127-32160146 MsG0880043887.01.T01:intron 20.0%
!!! GAAACATTGATTAAATCTAA+TGG - Chr8:32163026-32163045 None:intergenic 20.0%
!!! GATCATTTTTATAATAATGG+TGG + Chr8:32162945-32162964 MsG0880043887.01.T01:intron 20.0%
!!! GTTAGACTTTTGATTTTTAA+CGG + Chr8:32162719-32162738 MsG0880043887.01.T01:intron 20.0%
!!! TATAATAATGGTGGATTATA+GGG + Chr8:32162954-32162973 MsG0880043887.01.T01:intron 20.0%
!!! TTATAATAATGGTGGATTAT+AGG + Chr8:32162953-32162972 MsG0880043887.01.T01:intron 20.0%
!!! TTATTTCTTTAAAATGCGTT+TGG + Chr8:32161491-32161510 MsG0880043887.01.T01:intron 20.0%
!!! TTTTAATGAATCTCAATCAT+TGG + Chr8:32163648-32163667 MsG0880043887.01.T01:intron 20.0%
! AAACAATGTCCATGATATAT+CGG + Chr8:32160807-32160826 MsG0880043887.01.T01:CDS 25.0%
! AAACATACATGTTTGGATTA+AGG + Chr8:32161843-32161862 MsG0880043887.01.T01:intron 25.0%
! AAATTGCAACAATTTACATC+TGG - Chr8:32162590-32162609 None:intergenic 25.0%
! AACAATGACAACATAACTAT+TGG - Chr8:32160251-32160270 None:intergenic 25.0%
! AACTCTATCATAAGGAATAA+GGG - Chr8:32159279-32159298 None:intergenic 25.0%
! ACAAGTAATGAAGAATGATT+AGG - Chr8:32163164-32163183 None:intergenic 25.0%
! ATGTGAATCATCAAAAAGTT+TGG - Chr8:32164055-32164074 None:intergenic 25.0%
! ATTGAAAACCCAAAAACTAT+CGG + Chr8:32161984-32162003 MsG0880043887.01.T01:intron 25.0%
! ATTTACATCTGGAGAAAAAA+TGG - Chr8:32162579-32162598 None:intergenic 25.0%
! CAAGAATCAAAATTTCTACA+AGG - Chr8:32159638-32159657 None:intergenic 25.0%
! CAAGTAATGAAGAATGATTA+GGG - Chr8:32163163-32163182 None:intergenic 25.0%
! CACTTATTATATACAATGAG+AGG + Chr8:32160678-32160697 MsG0880043887.01.T01:CDS 25.0%
! GAAAATTCTCCAAAACAAAT+GGG - Chr8:32163358-32163377 None:intergenic 25.0%
! TACCAACATGAAAAACATTA+GGG - Chr8:32159928-32159947 None:intergenic 25.0%
! TATATAATAAGTGCAAGTGA+TGG - Chr8:32160671-32160690 None:intergenic 25.0%
! TATGGTAGAACATTAGAATT+TGG + Chr8:32159560-32159579 MsG0880043887.01.T01:intron 25.0%
! TCTGTTAACGTAATAGTATT+AGG + Chr8:32162673-32162692 MsG0880043887.01.T01:intron 25.0%
! TGAAAATTCTCCAAAACAAA+TGG - Chr8:32163359-32163378 None:intergenic 25.0%
! TTAAATGTCTCATGTTCTAA+AGG - Chr8:32163258-32163277 None:intergenic 25.0%
! TTACCAACATGAAAAACATT+AGG - Chr8:32159929-32159948 None:intergenic 25.0%
! TTCAGGATAACAAAGAAAAA+TGG - Chr8:32160176-32160195 None:intergenic 25.0%
! TTGTTGTGTATAAGAAGAAT+CGG + Chr8:32164703-32164722 MsG0880043887.01.T01:CDS 25.0%
! TTTGAATTTGATCTAGCATT+TGG - Chr8:32164536-32164555 None:intergenic 25.0%
!! ATGATTTGTGAAAATCTTCA+AGG + Chr8:32164402-32164421 MsG0880043887.01.T01:intron 25.0%
!! ATTCTTATCCGATAGTTTTT+GGG - Chr8:32161995-32162014 None:intergenic 25.0%
!! GGTTTCTCTTATAATTTTCT+AGG - Chr8:32159767-32159786 None:intergenic 25.0%
!! TCATTTTGCTTAAGAAGTTT+CGG + Chr8:32163875-32163894 MsG0880043887.01.T01:CDS 25.0%
!!! AGAGTTGATGCTTTTATAAT+TGG + Chr8:32159293-32159312 MsG0880043887.01.T01:CDS 25.0%
!!! AGTGCTTTTTAACAAATAGA+GGG + Chr8:32162778-32162797 MsG0880043887.01.T01:intron 25.0%
!!! AGTTGATGCTTTTATAATTG+GGG + Chr8:32159295-32159314 MsG0880043887.01.T01:CDS 25.0%
!!! GAGTTGATGCTTTTATAATT+GGG + Chr8:32159294-32159313 MsG0880043887.01.T01:CDS 25.0%
!!! TAGTGCTTTTTAACAAATAG+AGG + Chr8:32162777-32162796 MsG0880043887.01.T01:intron 25.0%
!!! TTCCCAATATTTTAGATTGT+GGG + Chr8:32162611-32162630 MsG0880043887.01.T01:intron 25.0%
!!! TTGTTTTGGAGAATTTTCAT+GGG + Chr8:32163360-32163379 MsG0880043887.01.T01:intron 25.0%
!!! TTTGTTTTGGAGAATTTTCA+TGG + Chr8:32163359-32163378 MsG0880043887.01.T01:intron 25.0%
AAAAAATGGCTGAATACCAA+AGG - Chr8:32162565-32162584 None:intergenic 30.0%
AAGAGGATCAAGAGATTAAT+GGG + Chr8:32159790-32159809 MsG0880043887.01.T01:intron 30.0%
AATTTGATCTAGCATTTGGT+GGG - Chr8:32164532-32164551 None:intergenic 30.0%
ACATGAAAAGATAACCAAGT+CGG - Chr8:32161256-32161275 None:intergenic 30.0%
ACTAATTCACTAGTATGCTA+TGG - Chr8:32160207-32160226 None:intergenic 30.0%
AGAAAGATCTAACCAATCTT+GGG - Chr8:32161800-32161819 None:intergenic 30.0%
AGAACATGATTGTATTCATG+AGG - Chr8:32160417-32160436 None:intergenic 30.0%
AGTAAGTAGATTAGATCAGA+TGG + Chr8:32159711-32159730 MsG0880043887.01.T01:intron 30.0%
ATGATGAATATCTTGAGTAC+AGG + Chr8:32159400-32159419 MsG0880043887.01.T01:intron 30.0%
ATGCTATGGATTCTAAATTC+AGG - Chr8:32160193-32160212 None:intergenic 30.0%
ATTCAACATGACTAGAAATC+TGG - Chr8:32160477-32160496 None:intergenic 30.0%
CAAAGGATGAATACAAAAGA+AGG - Chr8:32162548-32162567 None:intergenic 30.0%
CAACTCTATCATAAGGAATA+AGG - Chr8:32159280-32159299 None:intergenic 30.0%
CAGATAACTATGATTCTCTT+AGG - Chr8:32161205-32161224 None:intergenic 30.0%
CTAATAACTTGAAGCTTAAG+TGG + Chr8:32160011-32160030 MsG0880043887.01.T01:intron 30.0%
GATTAGATTGTGAATGAGAA+AGG - Chr8:32163101-32163120 None:intergenic 30.0%
GTAAGTAGATTAGATCAGAT+GGG + Chr8:32159712-32159731 MsG0880043887.01.T01:intron 30.0%
GTTAACGTAATAGTATTAGG+CGG + Chr8:32162676-32162695 MsG0880043887.01.T01:intron 30.0%
TAAGTAGATTAGATCAGATG+GGG + Chr8:32159713-32159732 MsG0880043887.01.T01:intron 30.0%
TAATTCATCATCATCCATAG+AGG - Chr8:32163518-32163537 None:intergenic 30.0%
TATAACCTTCTTTCACATTC+TGG - Chr8:32164179-32164198 None:intergenic 30.0%
TATCGGATATAGATACTTCT+AGG + Chr8:32161918-32161937 MsG0880043887.01.T01:intron 30.0%
TCCTTTCTTACTTAAAAGGT+TGG - Chr8:32162639-32162658 None:intergenic 30.0%
TGATACCTTTGAATAAACCT+CGG - Chr8:32162267-32162286 None:intergenic 30.0%
TGCACATAAACATACATGTT+TGG + Chr8:32161836-32161855 MsG0880043887.01.T01:intron 30.0%
TGTCTCCTTTCTTACTTAAA+AGG - Chr8:32162643-32162662 None:intergenic 30.0%
TTAGTAGTCAGAAATCTGTT+AGG + Chr8:32160303-32160322 MsG0880043887.01.T01:intron 30.0%
TTATAAGAGAAACCATCAAG+AGG + Chr8:32159773-32159792 MsG0880043887.01.T01:intron 30.0%
TTATTAATGTATCAAGGCCT+TGG + Chr8:32163773-32163792 MsG0880043887.01.T01:intron 30.0%
TTCAACATGACTAGAAATCT+GGG - Chr8:32160476-32160495 None:intergenic 30.0%
TTCTTAAGCAAAATGAAACC+AGG - Chr8:32163871-32163890 None:intergenic 30.0%
TTTCATTCTGTGATTGTTCT+TGG + Chr8:32164338-32164357 MsG0880043887.01.T01:intron 30.0%
! AAAGCATCAACTCTATCATA+AGG - Chr8:32159287-32159306 None:intergenic 30.0%
! ACTTGGTTATCTTTTCATGT+TGG + Chr8:32161256-32161275 MsG0880043887.01.T01:intron 30.0%
! AGCCCACAATCTAAAATATT+GGG - Chr8:32162616-32162635 None:intergenic 30.0%
! AGGTTATTGCTCTCATTTTA+TGG + Chr8:32163314-32163333 MsG0880043887.01.T01:intron 30.0%
! ATTCACCTATTTTCTGTATC+CGG - Chr8:32161884-32161903 None:intergenic 30.0%
! CAGCTGATATTAATCTTTTG+AGG + Chr8:32161460-32161479 MsG0880043887.01.T01:CDS 30.0%
! CATTCTTATCCGATAGTTTT+TGG - Chr8:32161996-32162015 None:intergenic 30.0%
! CTTCTTTTGTATTCATCCTT+TGG + Chr8:32162546-32162565 MsG0880043887.01.T01:intron 30.0%
! GTTCGAAATTTTGTGAAGTT+TGG + Chr8:32163473-32163492 MsG0880043887.01.T01:intron 30.0%
! TAAACAATATGCCTCTGAAA+TGG + Chr8:32164598-32164617 MsG0880043887.01.T01:CDS 30.0%
! TGTTGACCAAATTGATTTCT+TGG + Chr8:32161751-32161770 MsG0880043887.01.T01:intron 30.0%
! TTAACACATAGTTTGGAATC+CGG + Chr8:32164306-32164325 MsG0880043887.01.T01:intron 30.0%
! TTCCCTAATGTTTTTCATGT+TGG + Chr8:32159923-32159942 MsG0880043887.01.T01:intron 30.0%
!! AAACAATATGCCTCTGAAAT+GGG + Chr8:32164599-32164618 MsG0880043887.01.T01:CDS 30.0%
!! AAGAGATTAATGGGTTTGAT+AGG + Chr8:32159799-32159818 MsG0880043887.01.T01:intron 30.0%
!! AAGAGGTTTTAATGGATCTA+TGG + Chr8:32164457-32164476 MsG0880043887.01.T01:CDS 30.0%
!! AGAGATTAATGGGTTTGATA+GGG + Chr8:32159800-32159819 MsG0880043887.01.T01:intron 30.0%
!! CTTCCCAATATTTTAGATTG+TGG + Chr8:32162610-32162629 MsG0880043887.01.T01:intron 30.0%
!! CTTTTTGATGATTCACATCT+CGG + Chr8:32164057-32164076 MsG0880043887.01.T01:CDS 30.0%
!! GTGCTTTTTAACAAATAGAG+GGG + Chr8:32162779-32162798 MsG0880043887.01.T01:intron 30.0%
!! TCCAACCTTTTAAGTAAGAA+AGG + Chr8:32162635-32162654 MsG0880043887.01.T01:intron 30.0%
!! TGCTTTTTAACAAATAGAGG+GGG + Chr8:32162780-32162799 MsG0880043887.01.T01:intron 30.0%
!! TTGCGTGTTTAGTTTGTATA+TGG + Chr8:32159542-32159561 MsG0880043887.01.T01:intron 30.0%
!!! TGTTTTGGAGAATTTTCATG+GGG + Chr8:32163361-32163380 MsG0880043887.01.T01:intron 30.0%
AAAAACAAGTAGCGTGAACA+AGG - Chr8:32161289-32161308 None:intergenic 35.0%
AAAACAAGTAGCGTGAACAA+GGG - Chr8:32161288-32161307 None:intergenic 35.0%
AAAACCCACAAGAGCAAATT+AGG - Chr8:32163571-32163590 None:intergenic 35.0%
AAAATCTTCCAACTCCTCTA+TGG + Chr8:32163501-32163520 MsG0880043887.01.T01:intron 35.0%
AAGAAACGCAGAACCAATAT+TGG + Chr8:32164627-32164646 MsG0880043887.01.T01:CDS 35.0%
AATAATAAATGTCTAGGGGG+AGG + Chr8:32162753-32162772 MsG0880043887.01.T01:intron 35.0%
ACAATTGTGTACAGCATTTG+GGG + Chr8:32161685-32161704 MsG0880043887.01.T01:intron 35.0%
ACTTCAATGGGTCTCATAAT+AGG + Chr8:32162112-32162131 MsG0880043887.01.T01:intron 35.0%
ATACATTTGAACAGACCTCA+GGG + Chr8:32162807-32162826 MsG0880043887.01.T01:intron 35.0%
ATCATCCTTATACTCCTTCA+AGG - Chr8:32159385-32159404 None:intergenic 35.0%
ATCTTGGAGAAACATATCGA+AGG + Chr8:32160845-32160864 MsG0880043887.01.T01:CDS 35.0%
ATTACTATAGGTGGATCACA+TGG - Chr8:32163732-32163751 None:intergenic 35.0%
ATTAGTAATACGCACACGAT+CGG + Chr8:32160221-32160240 MsG0880043887.01.T01:intron 35.0%
ATTTCCCACAAACCTACAAA+CGG + Chr8:32162497-32162516 MsG0880043887.01.T01:intron 35.0%
ATTTGAATGGGTCTTGATGA+CGG - Chr8:32162343-32162362 None:intergenic 35.0%
ATTTGGCCCAGAAAATTATG+GGG + Chr8:32160527-32160546 MsG0880043887.01.T01:intron 35.0%
CAACATGATAAGACAAGCAT+TGG - Chr8:32160057-32160076 None:intergenic 35.0%
CAAGAGGATCAAGAGATTAA+TGG + Chr8:32159789-32159808 MsG0880043887.01.T01:intron 35.0%
CAATCATTGGTCAAATCTGA+TGG + Chr8:32163661-32163680 MsG0880043887.01.T01:intron 35.0%
CAGAATGAAAATTCAGATCC+CGG - Chr8:32164328-32164347 None:intergenic 35.0%
CATGAAAAGATAACCAAGTC+GGG - Chr8:32161255-32161274 None:intergenic 35.0%
CATTTGGCCCAGAAAATTAT+GGG + Chr8:32160526-32160545 MsG0880043887.01.T01:intron 35.0%
CTGTAAAAGCAAACAACGAA+AGG - Chr8:32161545-32161564 None:intergenic 35.0%
CTTTCACATACAGTGACTAT+TGG - Chr8:32162399-32162418 None:intergenic 35.0%
GAATACGCCATAGTGAAAAT+AGG - Chr8:32161589-32161608 None:intergenic 35.0%
GAATTTGATCTAGCATTTGG+TGG - Chr8:32164533-32164552 None:intergenic 35.0%
GACAATTGTGTACAGCATTT+GGG + Chr8:32161684-32161703 MsG0880043887.01.T01:intron 35.0%
GAGAAAGATCTAACCAATCT+TGG - Chr8:32161801-32161820 None:intergenic 35.0%
GAGGAAATGCAATAATATCG+AGG + Chr8:32161634-32161653 MsG0880043887.01.T01:intron 35.0%
GATACCTTTGAATAAACCTC+GGG - Chr8:32162266-32162285 None:intergenic 35.0%
GCAACTCAGTTGTTAACTTA+TGG - Chr8:32164110-32164129 None:intergenic 35.0%
GCATTCAGAAGAGAATATCT+TGG + Chr8:32160829-32160848 MsG0880043887.01.T01:CDS 35.0%
GTTATATTGCTTCTACGTCA+TGG + Chr8:32164193-32164212 MsG0880043887.01.T01:CDS 35.0%
TAATCTCTTGATCCTCTTGA+TGG - Chr8:32159788-32159807 None:intergenic 35.0%
TATATAGAGAGAGGACATGT+AGG + Chr8:32159682-32159701 MsG0880043887.01.T01:intron 35.0%
TATTTCGTTCAAACCACATG+CGG - Chr8:32160994-32161013 None:intergenic 35.0%
TCATGAGGTAAAAGCTCATT+AGG - Chr8:32160402-32160421 None:intergenic 35.0%
TCATTTGGCCCAGAAAATTA+TGG + Chr8:32160525-32160544 MsG0880043887.01.T01:intron 35.0%
TCTTGGAGAAACATATCGAA+GGG + Chr8:32160846-32160865 MsG0880043887.01.T01:CDS 35.0%
TCTTTCCAGAATGTGAAAGA+AGG + Chr8:32164171-32164190 MsG0880043887.01.T01:CDS 35.0%
TGAAGATCGTTTGCCAATAT+TGG - Chr8:32164643-32164662 None:intergenic 35.0%
TGGCAAACGATCTTCAATTT+CGG + Chr8:32164647-32164666 MsG0880043887.01.T01:CDS 35.0%
TGGCTATAGTTGAATCAGTA+AGG + Chr8:32159159-32159178 MsG0880043887.01.T01:CDS 35.0%
TTAAGCCATTTAGACACATC+AGG - Chr8:32161369-32161388 None:intergenic 35.0%
TTCAAGATACAATAAGGCCA+AGG - Chr8:32163793-32163812 None:intergenic 35.0%
TTCAGACAGCAAAAGGAAAA+TGG - Chr8:32159959-32159978 None:intergenic 35.0%
TTCTACAAGGGTAAGTAACA+AGG - Chr8:32159625-32159644 None:intergenic 35.0%
TTCTGAATGCCGATATATCA+TGG - Chr8:32160819-32160838 None:intergenic 35.0%
TTGAAACTTCAGACAGCAAA+AGG - Chr8:32159966-32159985 None:intergenic 35.0%
TTGTGTATAAGAAGAATCGG+AGG + Chr8:32164706-32164725 MsG0880043887.01.T01:CDS 35.0%
TTGTTTGGGTATATAGAGAG+AGG + Chr8:32159673-32159692 MsG0880043887.01.T01:intron 35.0%
TTTGGATCCCTAAGATGAAA+GGG - Chr8:32161057-32161076 None:intergenic 35.0%
! AAGGTATCACACTGTTAACA+TGG + Chr8:32162278-32162297 MsG0880043887.01.T01:intron 35.0%
! AATTTTCATGGGGTAGCATT+TGG + Chr8:32163371-32163390 MsG0880043887.01.T01:intron 35.0%
! ACTAGAAATCTGGGATGATA+GGG - Chr8:32160467-32160486 None:intergenic 35.0%
! CAACAACACTTTTCGTGTTA+CGG - Chr8:32164689-32164708 None:intergenic 35.0%
! CTCTCTCATGAGTATCATTT+TGG + Chr8:32160441-32160460 MsG0880043887.01.T01:intron 35.0%
! GAATTTTGTTCTCTGTCTGA+AGG + Chr8:32160493-32160512 MsG0880043887.01.T01:intron 35.0%
! GAGCCCACAATCTAAAATAT+TGG - Chr8:32162617-32162636 None:intergenic 35.0%
! GTCAATCGTCAATGTCTTTT+CGG + Chr8:32164427-32164446 MsG0880043887.01.T01:CDS 35.0%
! TAACACATAGTTTGGAATCC+GGG + Chr8:32164307-32164326 MsG0880043887.01.T01:intron 35.0%
! TATCAGAGGATTTTGTCTCA+AGG - Chr8:32163123-32163142 None:intergenic 35.0%
! TATTTTCAATCAACCCGACT+TGG + Chr8:32161239-32161258 MsG0880043887.01.T01:intron 35.0%
! TTCACCTATTTTCTGTATCC+GGG - Chr8:32161883-32161902 None:intergenic 35.0%
! TTTATGCGTCCCATTTGTTT+TGG + Chr8:32163346-32163365 MsG0880043887.01.T01:intron 35.0%
!! AATTTGCTCTTGTGGGTTTT+TGG + Chr8:32163571-32163590 MsG0880043887.01.T01:intron 35.0%
!! ACTTGACTTGGACTAAGTTT+GGG + Chr8:32159228-32159247 MsG0880043887.01.T01:CDS 35.0%
!! AGATACTTCTAGGATATGCT+TGG + Chr8:32161928-32161947 MsG0880043887.01.T01:intron 35.0%
!! GATGGGTTATGGATTTGAAT+GGG - Chr8:32162355-32162374 None:intergenic 35.0%
!! GTCGTTTGAAGAGGTTTTAA+TGG + Chr8:32164449-32164468 MsG0880043887.01.T01:CDS 35.0%
!! GTTTATTTTCTCTGTTCCAC+CGG + Chr8:32163683-32163702 MsG0880043887.01.T01:intron 35.0%
!! GTTTGGCTTTCAGTTTAACA+TGG - Chr8:32164038-32164057 None:intergenic 35.0%
!! TTCTTTGAAACCCATTTCAG+AGG - Chr8:32164612-32164631 None:intergenic 35.0%
AAAATTTCCCGTATCCGCAT+TGG + Chr8:32163818-32163837 MsG0880043887.01.T01:intron 40.0%
AAACCAGGATATGTAGTTGC+TGG - Chr8:32163856-32163875 None:intergenic 40.0%
AACAATGAGAAATGTGCCAC+TGG + Chr8:32163978-32163997 MsG0880043887.01.T01:CDS 40.0%
AATTACTTTGACCTTCCCTG+AGG - Chr8:32162825-32162844 None:intergenic 40.0%
ACAACCGTTTGTAGGTTTGT+GGG - Chr8:32162504-32162523 None:intergenic 40.0%
ACTGCGAGATATGACTTCAA+TGG + Chr8:32162099-32162118 MsG0880043887.01.T01:intron 40.0%
AGCTGGGCATGATTATCAAA+AGG + Chr8:32160930-32160949 MsG0880043887.01.T01:CDS 40.0%
AGTCACTGTATGTGAAAGCT+AGG + Chr8:32162401-32162420 MsG0880043887.01.T01:intron 40.0%
AGTCAGACCCTTTCATCTTA+GGG + Chr8:32161047-32161066 MsG0880043887.01.T01:CDS 40.0%
ATAAGTTGTTCCAAGGCAAG+TGG - Chr8:32161722-32161741 None:intergenic 40.0%
ATCATCATCCATAGAGGAGT+TGG - Chr8:32163512-32163531 None:intergenic 40.0%
ATCCAGCATAAGTTGTTCCA+AGG - Chr8:32161729-32161748 None:intergenic 40.0%
ATGTGCATGCAAGAGAAAAG+AGG - Chr8:32161823-32161842 None:intergenic 40.0%
ATTTCTGCACAACAGAGGAA+AGG - Chr8:32163949-32163968 None:intergenic 40.0%
CAAAGCCTGATGTGTCTAAA+TGG + Chr8:32161361-32161380 MsG0880043887.01.T01:CDS 40.0%
CACAAGAGCAAATTAGGCAT+CGG - Chr8:32163565-32163584 None:intergenic 40.0%
CAGAAAACTCTTCCTCAGAT+GGG - Chr8:32159202-32159221 None:intergenic 40.0%
CAGCAGCTTAACACATAGTT+TGG + Chr8:32164299-32164318 MsG0880043887.01.T01:intron 40.0%
CATGGCTAAGGAATATTGTG+AGG + Chr8:32161615-32161634 MsG0880043887.01.T01:intron 40.0%
CCAATAGCATCTCTATCAAG+TGG - Chr8:32160740-32160759 None:intergenic 40.0%
CCACTTGATAGAGATGCTAT+TGG + Chr8:32160737-32160756 MsG0880043887.01.T01:CDS 40.0%
CTGCGAGATATGACTTCAAT+GGG + Chr8:32162100-32162119 MsG0880043887.01.T01:intron 40.0%
GAATGCCGAACATTATGATG+AGG + Chr8:32159250-32159269 MsG0880043887.01.T01:CDS 40.0%
GACGTTGACAACAAAATGAC+AGG - Chr8:32160637-32160656 None:intergenic 40.0%
GATACATTTGAACAGACCTC+AGG + Chr8:32162806-32162825 MsG0880043887.01.T01:intron 40.0%
GATTCTTGTTAACTCGGCTT+AGG + Chr8:32159650-32159669 MsG0880043887.01.T01:intron 40.0%
GATTGTTCTTGGTCATTGCA+TGG + Chr8:32164349-32164368 MsG0880043887.01.T01:intron 40.0%
GGACAATTGTGTACAGCATT+TGG + Chr8:32161683-32161702 MsG0880043887.01.T01:intron 40.0%
GGCAACCTCATCATAATGTT+CGG - Chr8:32159258-32159277 None:intergenic 40.0%
GGCTTTCAGTTTAACATGGT+AGG - Chr8:32164034-32164053 None:intergenic 40.0%
GTATTCGTAGATCATGGCTA+AGG + Chr8:32161603-32161622 MsG0880043887.01.T01:intron 40.0%
GTCAGAAATCTGTTAGGAGT+TGG + Chr8:32160309-32160328 MsG0880043887.01.T01:intron 40.0%
GTTTGGATCCCTAAGATGAA+AGG - Chr8:32161058-32161077 None:intergenic 40.0%
GTTTGTAGGTTTGTGGGAAA+TGG - Chr8:32162498-32162517 None:intergenic 40.0%
TATGGCGTATTCGTAGATCA+TGG + Chr8:32161597-32161616 MsG0880043887.01.T01:intron 40.0%
TCATATCGAGAGGAAGGAAA+CGG + Chr8:32159349-32159368 MsG0880043887.01.T01:CDS 40.0%
TCTCAGTATGTTCACAAGCT+GGG + Chr8:32160914-32160933 MsG0880043887.01.T01:CDS 40.0%
TCTTAGGGATCCAAACAGAA+TGG + Chr8:32161062-32161081 MsG0880043887.01.T01:CDS 40.0%
TGTATAAGAAGAATCGGAGG+CGG + Chr8:32164709-32164728 MsG0880043887.01.T01:CDS 40.0%
TGTGAACATACTGAGAAGCA+AGG - Chr8:32160910-32160929 None:intergenic 40.0%
TTAGTAATACGCACACGATC+GGG + Chr8:32160222-32160241 MsG0880043887.01.T01:intron 40.0%
TTCTCAGTATGTTCACAAGC+TGG + Chr8:32160913-32160932 MsG0880043887.01.T01:CDS 40.0%
! ACTTGATGACATGCTTGCAA+AGG - Chr8:32164378-32164397 None:intergenic 40.0%
! CGCGAGATTTTAAGCATCTA+GGG + Chr8:32161662-32161681 MsG0880043887.01.T01:intron 40.0%
! CTACCTTTTAGCGATATGCA+CGG + Chr8:32162145-32162164 MsG0880043887.01.T01:intron 40.0%
! CTGCAACAAATGGTTCGTTT+TGG + Chr8:32161088-32161107 MsG0880043887.01.T01:CDS 40.0%
! GACTAGAAATCTGGGATGAT+AGG - Chr8:32160468-32160487 None:intergenic 40.0%
! GGAATATTTCAGAGTGTCCT+GGG + Chr8:32161772-32161791 MsG0880043887.01.T01:intron 40.0%
! GTCCTGTCCTATTTTCACTA+TGG + Chr8:32161579-32161598 MsG0880043887.01.T01:intron 40.0%
! GTTTTTCTTGCTCGCAACTT+TGG - Chr8:32164280-32164299 None:intergenic 40.0%
! TAACTCGGCTTAGGTTGTTT+GGG + Chr8:32159659-32159678 MsG0880043887.01.T01:intron 40.0%
! TGGAATATTTCAGAGTGTCC+TGG + Chr8:32161771-32161790 MsG0880043887.01.T01:intron 40.0%
! TGGTACCTTGAAGGAGTATA+AGG + Chr8:32159377-32159396 MsG0880043887.01.T01:intron 40.0%
! TTAACTCGGCTTAGGTTGTT+TGG + Chr8:32159658-32159677 MsG0880043887.01.T01:intron 40.0%
!! AATGGTGGATTATAGGGTGA+GGG + Chr8:32162960-32162979 MsG0880043887.01.T01:intron 40.0%
!! AATTAGGCATCGGAAACATC+AGG - Chr8:32163555-32163574 None:intergenic 40.0%
!! AGGCTATTGACTTGTGCATT+TGG - Chr8:32160890-32160909 None:intergenic 40.0%
!! ATGGAATCTTTTTGGCACCT+GGG - Chr8:32160763-32160782 None:intergenic 40.0%
!! GACTTGACTTGGACTAAGTT+TGG + Chr8:32159227-32159246 MsG0880043887.01.T01:CDS 40.0%
!! GATGCCTAATTTGCTCTTGT+GGG + Chr8:32163564-32163583 MsG0880043887.01.T01:intron 40.0%
!! GGATGGGTTATGGATTTGAA+TGG - Chr8:32162356-32162375 None:intergenic 40.0%
!! TAATGGTGGATTATAGGGTG+AGG + Chr8:32162959-32162978 MsG0880043887.01.T01:intron 40.0%
!! TATGGAATCTTTTTGGCACC+TGG - Chr8:32160764-32160783 None:intergenic 40.0%
!!! GGGTTTTTGGTGATGATGAT+AGG + Chr8:32163584-32163603 MsG0880043887.01.T01:intron 40.0%
AACAGAGGAAAGGAAGGGTA+AGG - Chr8:32163939-32163958 None:intergenic 45.0%
AACGCAAACGAATCGTCAAC+TGG - Chr8:32164489-32164508 None:intergenic 45.0%
AAGGCATATTATGCAGAGCC+CGG + Chr8:32161862-32161881 MsG0880043887.01.T01:intron 45.0%
AAGTGGTCATGTGCACAATC+AGG + Chr8:32160028-32160047 MsG0880043887.01.T01:intron 45.0%
ACAATTACATTGACCTCCCG+AGG + Chr8:32162247-32162266 MsG0880043887.01.T01:intron 45.0%
ACCTCCCGAGGTTTATTCAA+AGG + Chr8:32162259-32162278 MsG0880043887.01.T01:intron 45.0%
ACCTTTGAATAAACCTCGGG+AGG - Chr8:32162263-32162282 None:intergenic 45.0%
ACTTGAAATTCCCGACTCTG+CGG + Chr8:32164224-32164243 MsG0880043887.01.T01:CDS 45.0%
AGAATGGCAGCTGCAACAAA+TGG + Chr8:32161078-32161097 MsG0880043887.01.T01:CDS 45.0%
AGAGCCCGGATACAGAAAAT+AGG + Chr8:32161876-32161895 MsG0880043887.01.T01:intron 45.0%
AGGCGTCATGTTAATACGTC+TGG + Chr8:32160698-32160717 MsG0880043887.01.T01:CDS 45.0%
AGTTGACGATTCGTTTGCGT+TGG + Chr8:32164488-32164507 MsG0880043887.01.T01:CDS 45.0%
ATAGGTGGATCACATGGTGA+GGG - Chr8:32163726-32163745 None:intergenic 45.0%
ATTGTGTACAGCATTTGGGG+AGG + Chr8:32161688-32161707 MsG0880043887.01.T01:intron 45.0%
ATTTGAACAGACCTCAGGGA+AGG + Chr8:32162811-32162830 MsG0880043887.01.T01:intron 45.0%
CAAAAGGTCTACTCATGAGC+TGG + Chr8:32160946-32160965 MsG0880043887.01.T01:CDS 45.0%
CACAACCGTTTGTAGGTTTG+TGG - Chr8:32162505-32162524 None:intergenic 45.0%
CATCCGTGCATATCGCTAAA+AGG - Chr8:32162151-32162170 None:intergenic 45.0%
CATCTCTATCAAGTGGTCCA+TGG - Chr8:32160733-32160752 None:intergenic 45.0%
CGCCATAGTGAAAATAGGAC+AGG - Chr8:32161584-32161603 None:intergenic 45.0%
CTCTCGATATGAAACCGAGT+CGG - Chr8:32159341-32159360 None:intergenic 45.0%
CTGAGTTGCATTCAAGCTAC+TGG + Chr8:32164121-32164140 MsG0880043887.01.T01:CDS 45.0%
CTGCTAGACCTCAATCAATG+CGG + Chr8:32160604-32160623 MsG0880043887.01.T01:intron 45.0%
GAAGGGATTGAGCGATATTG+TGG + Chr8:32160863-32160882 MsG0880043887.01.T01:CDS 45.0%
GAGTCAGACCCTTTCATCTT+AGG + Chr8:32161046-32161065 MsG0880043887.01.T01:CDS 45.0%
GATTGTGCGTGAGAATGTGT+AGG - Chr8:32163074-32163093 None:intergenic 45.0%
GCAGAAAACTCTTCCTCAGA+TGG - Chr8:32159203-32159222 None:intergenic 45.0%
GCTATCTCACAACCGTTTGT+AGG - Chr8:32162512-32162531 None:intergenic 45.0%
GGAAATGGCAGAGGTTTAAC+TGG - Chr8:32162483-32162502 None:intergenic 45.0%
GGGAGTAGTCAAATCACTAG+TGG + Chr8:32159733-32159752 MsG0880043887.01.T01:intron 45.0%
GTAGTCAAATCACTAGTGGC+AGG + Chr8:32159737-32159756 MsG0880043887.01.T01:intron 45.0%
GTCTACTCATGAGCTGGATT+TGG + Chr8:32160952-32160971 MsG0880043887.01.T01:CDS 45.0%
GTGGAGAGATACTACCTAGT+CGG + Chr8:32160553-32160572 MsG0880043887.01.T01:intron 45.0%
GTTTGCGTTGGACTTGTCAT+TGG + Chr8:32164500-32164519 MsG0880043887.01.T01:CDS 45.0%
TATAGGTGGATCACATGGTG+AGG - Chr8:32163727-32163746 None:intergenic 45.0%
TCAAATCACTAGTGGCAGGA+AGG + Chr8:32159741-32159760 MsG0880043887.01.T01:intron 45.0%
TCAATTTCGGCAACTCCTTC+TGG + Chr8:32164660-32164679 MsG0880043887.01.T01:CDS 45.0%
TCCTCTGTTGTGCAGAAATG+TGG + Chr8:32163950-32163969 MsG0880043887.01.T01:CDS 45.0%
TCGGTTTCATATCGAGAGGA+AGG + Chr8:32159343-32159362 MsG0880043887.01.T01:CDS 45.0%
TGCACAACAGAGGAAAGGAA+GGG - Chr8:32163944-32163963 None:intergenic 45.0%
TGCCTTGGAACAACTTATGC+TGG + Chr8:32161724-32161743 MsG0880043887.01.T01:intron 45.0%
TGCTAGACCTCAATCAATGC+GGG + Chr8:32160605-32160624 MsG0880043887.01.T01:intron 45.0%
TTCGTGTTACGGTTACCAGA+AGG - Chr8:32164678-32164697 None:intergenic 45.0%
TTGAGTCGATATCTCCGACT+AGG - Chr8:32160570-32160589 None:intergenic 45.0%
! ACGGACTATTGGTACCTTGA+AGG + Chr8:32159368-32159387 MsG0880043887.01.T01:CDS 45.0%
! AGTCGGGAATTTCAAGTGCT+CGG - Chr8:32164221-32164240 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGA+GGG - Chr8:32159873-32159892 None:intergenic 45.0%
! CACCCTCCCCATAATTTTCT+GGG - Chr8:32160536-32160555 None:intergenic 45.0%
! GCGCGAGATTTTAAGCATCT+AGG + Chr8:32161661-32161680 MsG0880043887.01.T01:intron 45.0%
! GTCTTTTCGGTCGTTTGAAG+AGG + Chr8:32164440-32164459 MsG0880043887.01.T01:CDS 45.0%
! TCAAGCCTTATCCCACTAAG+AGG - Chr8:32159874-32159893 None:intergenic 45.0%
! TCTCACAGAATGCTCTGGAT+GGG - Chr8:32162372-32162391 None:intergenic 45.0%
! TGTTCTCTGTCTGAAGGTAC+TGG + Chr8:32160499-32160518 MsG0880043887.01.T01:intron 45.0%
! TTCTCACAGAATGCTCTGGA+TGG - Chr8:32162373-32162392 None:intergenic 45.0%
!! AATCCACTGACTTTCCATCC+AGG - Chr8:32161423-32161442 None:intergenic 45.0%
!! AGAATGCTCTGGATGGGTTA+TGG - Chr8:32162366-32162385 None:intergenic 45.0%
!! AGAGGAAGGAAACGGACTAT+TGG + Chr8:32159357-32159376 MsG0880043887.01.T01:CDS 45.0%
!! CGATGCCTAATTTGCTCTTG+TGG + Chr8:32163563-32163582 MsG0880043887.01.T01:intron 45.0%
!! TGAAGGTACTGGTGCTCATT+TGG + Chr8:32160510-32160529 MsG0880043887.01.T01:intron 45.0%
!! TTTATTTTCCCCTGCTCCAC+CGG - Chr8:32163003-32163022 None:intergenic 45.0%
!! TTTCTGCTGCTGACTTGACT+TGG + Chr8:32159216-32159235 MsG0880043887.01.T01:CDS 45.0%
!!! ACGTCTGGTTTTATCTGCCA+TGG + Chr8:32160713-32160732 MsG0880043887.01.T01:CDS 45.0%
!!! AAAGATATATTATTATTTTA+AGG - Chr8:32162851-32162870 None:intergenic 5.0%
!!! AAGATATATTATTATTTTAA+GGG - Chr8:32162850-32162869 None:intergenic 5.0%
AACATGCACTTCCTGTCGCA+TGG + Chr8:32161319-32161338 MsG0880043887.01.T01:CDS 50.0%
AGGTTTGTGGGAAATGGCAG+AGG - Chr8:32162492-32162511 None:intergenic 50.0%
ATCAAGCTAGCATCCGCATG+TGG + Chr8:32160978-32160997 MsG0880043887.01.T01:CDS 50.0%
ATGTAGCCGACCCTCTTAGT+GGG + Chr8:32159860-32159879 MsG0880043887.01.T01:intron 50.0%
CACGCAAAGCTTCTGTGAAC+AGG + Chr8:32162449-32162468 MsG0880043887.01.T01:intron 50.0%
CCAGAAAATTATGGGGAGGG+TGG + Chr8:32160534-32160553 MsG0880043887.01.T01:intron 50.0%
CCTTATCCCACTAAGAGGGT+CGG - Chr8:32159869-32159888 None:intergenic 50.0%
CGAATGTGTTGTGTCCGACT+CGG + Chr8:32159324-32159343 MsG0880043887.01.T01:CDS 50.0%
CGTGTAATGATCCATGCGAC+AGG - Chr8:32161333-32161352 None:intergenic 50.0%
CTGCACAACAGAGGAAAGGA+AGG - Chr8:32163945-32163964 None:intergenic 50.0%
GATAGAGATGCTATTGGCCC+AGG + Chr8:32160743-32160762 MsG0880043887.01.T01:CDS 50.0%
GCCACATTTCTGCACAACAG+AGG - Chr8:32163954-32163973 None:intergenic 50.0%
GCTAGACCTCAATCAATGCG+GGG + Chr8:32160606-32160625 MsG0880043887.01.T01:intron 50.0%
GCTGTTCTCACAGAATGCTC+TGG - Chr8:32162377-32162396 None:intergenic 50.0%
GGAGCAAAAAGTGAAAGCGG+TGG + Chr8:32162697-32162716 MsG0880043887.01.T01:intron 50.0%
GGATATGTAGTTGCTGGCAC+TGG - Chr8:32163850-32163869 None:intergenic 50.0%
GGCACAAATACCACTTGCCT+TGG + Chr8:32161709-32161728 MsG0880043887.01.T01:intron 50.0%
GGCCCAGAAAATTATGGGGA+GGG + Chr8:32160531-32160550 MsG0880043887.01.T01:intron 50.0%
GGCGGAGCAAAAAGTGAAAG+CGG + Chr8:32162694-32162713 MsG0880043887.01.T01:intron 50.0%
GGCTCAATTAAGTCCCTCAC+CGG + Chr8:32162981-32163000 MsG0880043887.01.T01:intron 50.0%
GGCTCAATTAAGTCCCTCAC+CGG - Chr8:32163000-32162981 None:intergenic 50.0%
GTAGGCTTCTAATGCTCCAG+AGG - Chr8:32164016-32164035 None:intergenic 50.0%
GTGCCAGCAACTACATATCC+TGG + Chr8:32163850-32163869 MsG0880043887.01.T01:intron 50.0%
GTTGCAGCTGCCATTCTGTT+TGG - Chr8:32161075-32161094 None:intergenic 50.0%
GTTGCTGCAGACTCATCGTT+TGG + Chr8:32161124-32161143 MsG0880043887.01.T01:CDS 50.0%
TCAATTAAGTCCCTCACCGG+TGG + Chr8:32162984-32163003 MsG0880043887.01.T01:intron 50.0%
TCAATTAAGTCCCTCACCGG+TGG - Chr8:32163003-32162984 None:intergenic 50.0%
TCCTCAGATGGGTCTTGCAA+AGG - Chr8:32159191-32159210 None:intergenic 50.0%
TCCTTTGCAAGACCCATCTG+AGG + Chr8:32159187-32159206 MsG0880043887.01.T01:CDS 50.0%
TCGCAACTTTGGCAAAGAGG+CGG - Chr8:32164269-32164288 None:intergenic 50.0%
TGCTCGCAACTTTGGCAAAG+AGG - Chr8:32164272-32164291 None:intergenic 50.0%
TGGCCCAGAAAATTATGGGG+AGG + Chr8:32160530-32160549 MsG0880043887.01.T01:intron 50.0%
TTTCTCTGTTCCACCGGTGA+GGG + Chr8:32163689-32163708 MsG0880043887.01.T01:intron 50.0%
! CCACCCTCCCCATAATTTTC+TGG - Chr8:32160537-32160556 None:intergenic 50.0%
! CGTTGGACTTGTCATTGGCT+TGG + Chr8:32164505-32164524 MsG0880043887.01.T01:CDS 50.0%
! GAGCGCTGCAAAGAGTAGAT+TGG + Chr8:32164079-32164098 MsG0880043887.01.T01:CDS 50.0%
! GAGGCGGTTTTTATCGTCCA+AGG - Chr8:32164253-32164272 None:intergenic 50.0%
! TTTTCTCTGTTCCACCGGTG+AGG + Chr8:32163688-32163707 MsG0880043887.01.T01:intron 50.0%
!! CGACTCGGTTTCATATCGAG+AGG + Chr8:32159339-32159358 MsG0880043887.01.T01:CDS 50.0%
!! GTACAACCCCGCATTGATTG+AGG - Chr8:32160615-32160634 None:intergenic 50.0%
CACTAAGAGGGTCGGCTACA+TGG - Chr8:32159861-32159880 None:intergenic 55.0%
CAGGCTCAACACTACGAGCT+CGG - Chr8:32161404-32161423 None:intergenic 55.0%
CATGTAGCCGACCCTCTTAG+TGG + Chr8:32159859-32159878 MsG0880043887.01.T01:intron 55.0%
CCGACCCTCTTAGTGGGATA+AGG + Chr8:32159866-32159885 MsG0880043887.01.T01:intron 55.0%
CTAACCAATCTTGGGCACCC+AGG - Chr8:32161792-32161811 None:intergenic 55.0%
CTAATGCTCCAGAGGCTTCC+TGG - Chr8:32164008-32164027 None:intergenic 55.0%
GAGCCTGGATGGAAAGTCAG+TGG + Chr8:32161417-32161436 MsG0880043887.01.T01:CDS 55.0%
GGATATGAGAGCTGCTGCGT+TGG + Chr8:32162422-32162441 MsG0880043887.01.T01:intron 55.0%
GGTGCGATCCAATGCGGATA+CGG - Chr8:32163829-32163848 None:intergenic 55.0%
GTGCGATCCAATGCGGATAC+GGG - Chr8:32163828-32163847 None:intergenic 55.0%
GTTGCTGCTGCTGCTGTTGT+TGG + Chr8:32159896-32159915 MsG0880043887.01.T01:intron 55.0%
! AAATGTGCCACTGGCAAGCC+AGG + Chr8:32163987-32164006 MsG0880043887.01.T01:CDS 55.0%
! CTCGTAGTGTTGAGCCTGGA+TGG + Chr8:32161406-32161425 MsG0880043887.01.T01:CDS 55.0%
GTCCAAGGTGACCGCAGAGT+CGG - Chr8:32164238-32164257 None:intergenic 60.0%
GTGTCCTGGGTGCCCAAGAT+TGG + Chr8:32161785-32161804 MsG0880043887.01.T01:intron 60.0%
TCCAAGGTGACCGCAGAGTC+GGG - Chr8:32164237-32164256 None:intergenic 60.0%
! CGAGCTCGTAGTGTTGAGCC+TGG + Chr8:32161402-32161421 MsG0880043887.01.T01:CDS 60.0%
!! GGCACTGGTGCGATCCAATG+CGG - Chr8:32163835-32163854 None:intergenic 60.0%
AAGTCCCTCACCGGTGGAGC+AGG + Chr8:32162990-32163009 MsG0880043887.01.T01:intron 65.0%
AGTCCCTCACCGGTGGAGCA+GGG + Chr8:32162991-32163010 MsG0880043887.01.T01:intron 65.0%
CTGGCAAGCCAGGAAGCCTC+TGG + Chr8:32163997-32164016 MsG0880043887.01.T01:CDS 65.0%
TCCCGACTCTGCGGTCACCT+TGG + Chr8:32164233-32164252 MsG0880043887.01.T01:CDS 65.0%
TTCCCCTGCTCCACCGGTGA+GGG - Chr8:32162997-32163016 None:intergenic 65.0%
TTTCCCCTGCTCCACCGGTG+AGG - Chr8:32162998-32163017 None:intergenic 65.0%
! GAGGCTTCCTGGCTTGCCAG+TGG - Chr8:32163997-32164016 None:intergenic 65.0%
GTCCCTCACCGGTGGAGCAG+GGG + Chr8:32162992-32163011 MsG0880043887.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 32159152 32164755 32159152 ID=MsG0880043887.01;Name=MsG0880043887.01
Chr8 mRNA 32159152 32164755 32159152 ID=MsG0880043887.01.T01;Parent=MsG0880043887.01;Name=MsG0880043887.01.T01;_AED=0.27;_eAED=0.27;_QI=0|0.25|0|1|1|1|5|0|604
Chr8 exon 32159152 32159391 32159152 ID=MsG0880043887.01.T01:exon:7778;Parent=MsG0880043887.01.T01
Chr8 exon 32160611 32161162 32160611 ID=MsG0880043887.01.T01:exon:7779;Parent=MsG0880043887.01.T01
Chr8 exon 32161282 32161507 32161282 ID=MsG0880043887.01.T01:exon:7780;Parent=MsG0880043887.01.T01
Chr8 exon 32163851 32164315 32163851 ID=MsG0880043887.01.T01:exon:7781;Parent=MsG0880043887.01.T01
Chr8 exon 32164424 32164755 32164424 ID=MsG0880043887.01.T01:exon:7782;Parent=MsG0880043887.01.T01
Chr8 CDS 32159152 32159391 32159152 ID=MsG0880043887.01.T01:cds;Parent=MsG0880043887.01.T01
Chr8 CDS 32160611 32161162 32160611 ID=MsG0880043887.01.T01:cds;Parent=MsG0880043887.01.T01
Chr8 CDS 32161282 32161507 32161282 ID=MsG0880043887.01.T01:cds;Parent=MsG0880043887.01.T01
Chr8 CDS 32163851 32164315 32163851 ID=MsG0880043887.01.T01:cds;Parent=MsG0880043887.01.T01
Chr8 CDS 32164424 32164755 32164424 ID=MsG0880043887.01.T01:cds;Parent=MsG0880043887.01.T01
Gene Sequence

>MsG0880043887.01.T01

ATGGAGATGGCTATAGTTGAATCAGTAAGGAATATTCCTTTGCAAGACCCATCTGAGGAAGAGTTTTCTGCTGCTGACTTGACTTGGACTAAGTTTGGGAATGCCGAACATTATGATGAGGTTGCCCTTATTCCTTATGATAGAGTTGATGCTTTTATAATTGGGGAGTGTTCGAATGTGTTGTGTCCGACTCGGTTTCATATCGAGAGGAAGGAAACGGACTATTGGTACCTTGAAGGAACCTCAATCAATGCGGGGTTGTACCTGTCATTTTGTTGTCAACGTCTTTATGCTCGTCCATCACTTGCACTTATTATATACAATGAGAGGCGTCATGTTAATACGTCTGGTTTTATCTGCCATGGACCACTTGATAGAGATGCTATTGGCCCAGGTGCCAAAAAGATTCCATATATATGTAATGAAATTCAGCAGCAAACAATGTCCATGATATATCGGCATTCAGAAGAGAATATCTTGGAGAAACATATCGAAGGGATTGAGCGATATTGTGGTCCAAATGCACAAGTCAATAGCCTTGCTTCTCAGTATGTTCACAAGCTGGGCATGATTATCAAAAGGTCTACTCATGAGCTGGATTTGGATGATCAAGCTAGCATCCGCATGTGGTTTGAACGAAATAGAAAATCTGTATTTTTTCATCAGGATACTTCAGAGTCAGACCCTTTCATCTTAGGGATCCAAACAGAATGGCAGCTGCAACAAATGGTTCGTTTTGGTCATCGTAGTGTTGTTGCTGCAGACTCATCGTTTGGTGTGAAGAGACTTAAATATCCCTTGTTCACGCTACTTGTTTTTGATTCAAGACAACATGCACTTCCTGTCGCATGGATCATTACACGAAGCTTTGCAAAGCCTGATGTGTCTAAATGGCTTAAAGCTTTAATTGACCGAGCTCGTAGTGTTGAGCCTGGATGGAAAGTCAGTGGATTTTTAATTGACGATGCTGCAGCTGATATTAATCTTTTGAGGCAAGATTTTTATTTCTTTAAAATGCTGCCAGCAACTACATATCCTGGTTTCATTTTGCTTAAGAAGTTTCGGTGTAGTCAATTAGTCGTTGATATGTTAACTTGCTGTGTCCTTACCCTTCCTTTCCTCTGTTGTGCAGAAATGTGGCTTTCAACAATGAGAAATGTGCCACTGGCAAGCCAGGAAGCCTCTGGAGCATTAGAAGCCTACCATGTTAAACTGAAAGCCAAACTTTTTGATGATTCACATCTCGGAGCGCTGCAAAGAGTAGATTGGTTAGTCCATAAGTTAACAACTGAGTTGCATTCAAGCTACTGGCTTGATCGTTTCGCTGATGAAAGTGATTCTTTCCAGAATGTGAAAGAAGGTTATATTGCTTCTACGTCATGGCACCGAGCACTTGAAATTCCCGACTCTGCGGTCACCTTGGACGATAAAAACCGCCTCTTTGCCAAAGTTGCGAGCAAGAAAAACAGCAGCTTAACACATAGTTGTCAATCGTCAATGTCTTTTCGGTCGTTTGAAGAGGTTTTAATGGATCTATGGAGAAAACCAGTTGACGATTCGTTTGCGTTGGACTTGTCATTGGCTTGGACCCACCAAATGCTAGATCAAATTCAAAAACTTGTTGAACTGAATAATTCAACTAATATTGGTACTGTAGTAAACAATATGCCTCTGAAATGGGTTTCAAAGAAACGCAGAACCAATATTGGCAAACGATCTTCAATTTCGGCAACTCCTTCTGGTAACCGTAACACGAAAAGTGTTGTTGTGTATAAGAAGAATCGGAGGCGGAAAAGATTGTCACAACTAAGATGA
Protein sequence

>MsG0880043887.01.T01

MEMAIVESVRNIPLQDPSEEEFSAADLTWTKFGNAEHYDEVALIPYDRVDAFIIGECSNVLCPTRFHIERKETDYWYLEGTSINAGLYLSFCCQRLYARPSLALIIYNERRHVNTSGFICHGPLDRDAIGPGAKKIPYICNEIQQQTMSMIYRHSEENILEKHIEGIERYCGPNAQVNSLASQYVHKLGMIIKRSTHELDLDDQASIRMWFERNRKSVFFHQDTSESDPFILGIQTEWQLQQMVRFGHRSVVAADSSFGVKRLKYPLFTLLVFDSRQHALPVAWIITRSFAKPDVSKWLKALIDRARSVEPGWKVSGFLIDDAAADINLLRQDFYFFKMLPATTYPGFILLKKFRCSQLVVDMLTCCVLTLPFLCCAEMWLSTMRNVPLASQEASGALEAYHVKLKAKLFDDSHLGALQRVDWLVHKLTTELHSSYWLDRFADESDSFQNVKEGYIASTSWHRALEIPDSAVTLDDKNRLFAKVASKKNSSLTHSCQSSMSFRSFEEVLMDLWRKPVDDSFALDLSLAWTHQMLDQIQKLVELNNSTNIGTVVNNMPLKWVSKKRRTNIGKRSSISATPSGNRNTKSVVVYKKNRRRKRLSQLR*