Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001213.01.T01 | XP_013451437.2 | 83.186 | 226 | 19 | 2 | 107 | 332 | 209 | 415 | 2.59E-123 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001213.01.T01 | O82653 | 66.814 | 226 | 56 | 2 | 107 | 332 | 231 | 437 | 4.77E-97 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001213.01.T01 | A0A396HBP9 | 83.186 | 226 | 19 | 2 | 107 | 332 | 209 | 415 | 1.24e-123 | 370 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048135.01 | MsG0180001213.01 | 0.809452 | 1.878936e-50 | 1.103574e-47 |
| MsG0080048817.01 | MsG0180001213.01 | 0.812602 | 3.903832e-51 | 2.492847e-48 |
| MsG0180000152.01 | MsG0180001213.01 | 0.827025 | 1.964563e-54 | 1.873821e-51 |
| MsG0180000444.01 | MsG0180001213.01 | 0.806838 | 6.773207e-50 | 3.714302e-47 |
| MsG0180000546.01 | MsG0180001213.01 | 0.823612 | 1.260992e-53 | 1.091134e-50 |
| MsG0180000550.01 | MsG0180001213.01 | 0.838101 | 3.511903e-57 | 4.655380e-54 |
| MsG0180000614.01 | MsG0180001213.01 | 0.810235 | 1.274956e-50 | 7.644114e-48 |
| MsG0180000679.01 | MsG0180001213.01 | 0.839951 | 1.165232e-57 | 1.635025e-54 |
| MsG0180001043.01 | MsG0180001213.01 | 0.805578 | 1.247603e-49 | 6.624206e-47 |
| MsG0180001141.01 | MsG0180001213.01 | 0.870253 | 1.678538e-66 | 6.486271e-63 |
| MsG0180001213.01 | MsG0180001795.01 | 0.837271 | 5.734541e-57 | 7.410298e-54 |
| MsG0180001213.01 | MsG0180002458.01 | 0.886421 | 3.472456e-72 | 2.478890e-68 |
| MsG0180001213.01 | MsG0180002482.01 | 0.851671 | 7.624143e-61 | 1.554694e-57 |
| MsG0180001213.01 | MsG0180003073.01 | 0.831707 | 1.433083e-55 | 1.567769e-52 |
| MsG0180001213.01 | MsG0180003097.01 | 0.823202 | 1.572327e-53 | 1.344830e-50 |
| MsG0180001213.01 | MsG0180003113.01 | 0.801043 | 1.084762e-48 | 5.129372e-46 |
| MsG0180001213.01 | MsG0180003854.01 | 0.863417 | 2.527722e-64 | 7.656250e-61 |
| MsG0180001213.01 | MsG0180003952.01 | 0.822363 | 2.465187e-53 | 2.059146e-50 |
| MsG0180001213.01 | MsG0180004780.01 | 0.827961 | 1.171532e-54 | 1.148433e-51 |
| MsG0180001213.01 | MsG0180004886.01 | -0.809296 | 2.029648e-50 | 1.187186e-47 |
| MsG0180001213.01 | MsG0180005052.01 | 0.831224 | 1.884039e-55 | 2.031595e-52 |
| MsG0180001213.01 | MsG0180005382.01 | 0.814011 | 1.914389e-51 | 1.269752e-48 |
| MsG0180001213.01 | MsG0180005604.01 | 0.800685 | 1.283289e-48 | 6.012831e-46 |
| MsG0180001213.01 | MsG0180005851.01 | 0.876024 | 1.938951e-68 | 9.254865e-65 |
| MsG0180001213.01 | MsG0180005957.01 | 0.836284 | 1.024091e-56 | 1.284807e-53 |
| MsG0180001213.01 | MsG0180006143.01 | 0.810063 | 1.388518e-50 | 8.288102e-48 |
| MsG0180001213.01 | MsG0180006220.01 | 0.827221 | 1.763501e-54 | 1.691751e-51 |
| MsG0180001213.01 | MsG0280006406.01 | 0.873531 | 1.368563e-67 | 5.960310e-64 |
| MsG0180001213.01 | MsG0280006411.01 | 0.816019 | 6.861224e-52 | 4.806490e-49 |
| MsG0180001213.01 | MsG0280006708.01 | 0.806877 | 6.644033e-50 | 3.647087e-47 |
| MsG0180001213.01 | MsG0280007222.01 | 0.853155 | 2.879669e-61 | 6.162655e-58 |
| MsG0180001213.01 | MsG0280007488.01 | 0.822304 | 2.545287e-53 | 2.122324e-50 |
| MsG0180001213.01 | MsG0280008613.01 | 0.819225 | 1.298943e-52 | 9.936324e-50 |
| MsG0180001213.01 | MsG0280009230.01 | 0.842032 | 3.312618e-58 | 4.958613e-55 |
| MsG0180001213.01 | MsG0280009395.01 | -0.809030 | 2.314747e-50 | 1.344281e-47 |
| MsG0180001213.01 | MsG0280009716.01 | 0.849226 | 3.705236e-60 | 6.977389e-57 |
| MsG0180001213.01 | MsG0280011120.01 | -0.809056 | 2.284756e-50 | 1.327819e-47 |
| MsG0180001213.01 | MsG0280011387.01 | 0.835597 | 1.529514e-56 | 1.879250e-53 |
| MsG0180001213.01 | MsG0380011704.01 | 0.811532 | 6.678706e-51 | 4.144517e-48 |
| MsG0180001213.01 | MsG0380012108.01 | 0.819573 | 1.081839e-52 | 8.356931e-50 |
| MsG0180001213.01 | MsG0380012310.01 | 0.872906 | 2.219009e-67 | 9.442912e-64 |
| MsG0180001213.01 | MsG0380012566.01 | 0.861180 | 1.229343e-63 | 3.447664e-60 |
| MsG0180001213.01 | MsG0380012661.01 | -0.821390 | 4.140984e-53 | 3.364505e-50 |
| MsG0180001213.01 | MsG0380013178.01 | 0.822583 | 2.192417e-53 | 1.842790e-50 |
| MsG0180001213.01 | MsG0380013541.01 | 0.832888 | 7.308082e-56 | 8.278901e-53 |
| MsG0180001213.01 | MsG0380014276.01 | 0.833701 | 4.585234e-56 | 5.321752e-53 |
| MsG0180001213.01 | MsG0380014647.01 | 0.819333 | 1.227501e-52 | 9.417294e-50 |
| MsG0180001213.01 | MsG0380014770.01 | 0.821623 | 3.658342e-53 | 2.991681e-50 |
| MsG0180001213.01 | MsG0380015027.01 | 0.832665 | 8.304684e-56 | 9.345740e-53 |
| MsG0180001213.01 | MsG0380015164.01 | 0.840588 | 7.943150e-58 | 1.136697e-54 |
| MsG0180001213.01 | MsG0380015964.01 | 0.810596 | 1.065689e-50 | 6.450929e-48 |
| MsG0180001213.01 | MsG0380015965.01 | 0.823281 | 1.507425e-53 | 1.292177e-50 |
| MsG0180001213.01 | MsG0380016906.01 | 0.808914 | 2.450029e-50 | 1.418431e-47 |
| MsG0180001213.01 | MsG0380016974.01 | 0.803369 | 3.602471e-49 | 1.807051e-46 |
| MsG0180001213.01 | MsG0380017680.01 | 0.847354 | 1.219551e-59 | 2.161748e-56 |
| MsG0180001213.01 | MsG0380017866.01 | 0.880747 | 4.254307e-70 | 2.427316e-66 |
| MsG0180001213.01 | MsG0380018009.01 | 0.802196 | 6.292722e-49 | 3.063407e-46 |
| MsG0180001213.01 | MsG0480018163.01 | 0.809341 | 1.984703e-50 | 1.162314e-47 |
| MsG0180001213.01 | MsG0480018187.01 | 0.812047 | 5.159011e-51 | 3.245522e-48 |
| MsG0180001213.01 | MsG0480018906.01 | 0.830557 | 2.746276e-55 | 2.903351e-52 |
| MsG0180001213.01 | MsG0480019126.01 | 0.828847 | 7.159854e-55 | 7.200936e-52 |
| MsG0180001213.01 | MsG0480019373.01 | 0.836888 | 7.185141e-57 | 9.178718e-54 |
| MsG0180001213.01 | MsG0480020136.01 | 0.802510 | 5.421334e-49 | 2.660502e-46 |
| MsG0180001213.01 | MsG0480020843.01 | 0.808589 | 2.874985e-50 | 1.650307e-47 |
| MsG0180001213.01 | MsG0480020874.01 | 0.839708 | 1.347957e-57 | 1.876935e-54 |
| MsG0180001213.01 | MsG0480021164.01 | 0.865720 | 4.810727e-65 | 1.581103e-61 |
| MsG0180001213.01 | MsG0480021853.01 | 0.812565 | 3.977821e-51 | 2.537637e-48 |
| MsG0180001213.01 | MsG0480021904.01 | 0.831366 | 1.739186e-55 | 1.883257e-52 |
| MsG0180001213.01 | MsG0480021994.01 | 0.862309 | 5.552924e-64 | 1.618812e-60 |
| MsG0180001213.01 | MsG0480022052.01 | -0.820487 | 6.682694e-53 | 5.294890e-50 |
| MsG0180001213.01 | MsG0480022222.01 | 0.850554 | 1.575192e-60 | 3.097228e-57 |
| MsG0180001213.01 | MsG0480022252.01 | 0.811894 | 5.571150e-51 | 3.490325e-48 |
| MsG0180001213.01 | MsG0480022768.01 | 0.844425 | 7.622035e-59 | 1.230011e-55 |
| MsG0180001213.01 | MsG0480022791.01 | 0.828719 | 7.691083e-55 | 7.706744e-52 |
| MsG0180001213.01 | MsG0480022795.01 | 0.801347 | 9.399402e-49 | 4.478540e-46 |
| MsG0180001213.01 | MsG0480023174.01 | 0.861016 | 1.379428e-63 | 3.846169e-60 |
| MsG0180001213.01 | MsG0480023707.01 | 0.807371 | 5.221721e-50 | 2.903330e-47 |
| MsG0180001213.01 | MsG0480023747.01 | 0.800600 | 1.335568e-48 | 6.244418e-46 |
| MsG0180001213.01 | MsG0480023814.01 | 0.830884 | 2.283699e-55 | 2.437879e-52 |
| MsG0180001213.01 | MsG0580024165.01 | 0.816317 | 5.886336e-52 | 4.157361e-49 |
| MsG0180001213.01 | MsG0580024390.01 | 0.853857 | 1.811023e-61 | 3.968295e-58 |
| MsG0180001213.01 | MsG0580024495.01 | 0.810133 | 1.341187e-50 | 8.019916e-48 |
| MsG0180001213.01 | MsG0580024874.01 | 0.810943 | 8.964517e-51 | 5.477440e-48 |
| MsG0180001213.01 | MsG0580025089.01 | 0.802018 | 6.844810e-49 | 3.317239e-46 |
| MsG0180001213.01 | MsG0580025134.01 | 0.800471 | 1.419180e-48 | 6.613427e-46 |
| MsG0180001213.01 | MsG0580025400.01 | 0.842938 | 1.904877e-58 | 2.933361e-55 |
| MsG0180001213.01 | MsG0580025412.01 | 0.824747 | 6.825736e-54 | 6.100704e-51 |
| MsG0180001213.01 | MsG0580025421.01 | 0.876545 | 1.282065e-68 | 6.240078e-65 |
| MsG0180001213.01 | MsG0580025448.01 | 0.833302 | 5.764510e-56 | 6.611932e-53 |
| MsG0180001213.01 | MsG0580026301.01 | 0.822504 | 2.286777e-53 | 1.917686e-50 |
| MsG0180001213.01 | MsG0580026777.01 | 0.809957 | 1.463556e-50 | 8.711968e-48 |
| MsG0180001213.01 | MsG0580027034.01 | 0.807832 | 4.168073e-50 | 2.345488e-47 |
| MsG0180001213.01 | MsG0580028072.01 | 0.802030 | 6.806516e-49 | 3.299673e-46 |
| MsG0180001213.01 | MsG0580028901.01 | 0.820287 | 7.429034e-53 | 5.853551e-50 |
| MsG0180001213.01 | MsG0580029014.01 | 0.825094 | 5.652730e-54 | 5.102411e-51 |
| MsG0180001213.01 | MsG0580029355.01 | 0.826749 | 2.286417e-54 | 2.163347e-51 |
| MsG0180001213.01 | MsG0580029642.01 | 0.807199 | 5.680456e-50 | 3.144332e-47 |
| MsG0180001213.01 | MsG0580029952.01 | 0.837419 | 5.256227e-57 | 6.823585e-54 |
| MsG0180001213.01 | MsG0680030320.01 | 0.804764 | 1.847284e-49 | 9.605352e-47 |
| MsG0180001213.01 | MsG0680030414.01 | 0.808383 | 3.182041e-50 | 1.816866e-47 |
| MsG0180001213.01 | MsG0680030415.01 | 0.811011 | 8.665526e-51 | 5.304493e-48 |
| MsG0180001213.01 | MsG0680031243.01 | 0.825302 | 5.046950e-54 | 4.582537e-51 |
| MsG0180001213.01 | MsG0680032430.01 | 0.890381 | 1.036831e-73 | 8.697969e-70 |
| MsG0180001213.01 | MsG0680034219.01 | 0.801703 | 7.946269e-49 | 3.820195e-46 |
| MsG0180001213.01 | MsG0680035278.01 | 0.806028 | 1.003515e-49 | 5.390203e-47 |
| MsG0180001213.01 | MsG0680035704.01 | 0.868007 | 8.986572e-66 | 3.200607e-62 |
| MsG0180001213.01 | MsG0680035854.01 | 0.803004 | 4.287366e-49 | 2.130521e-46 |
| MsG0180001213.01 | MsG0780035948.01 | 0.802984 | 4.327763e-49 | 2.149553e-46 |
| MsG0180001213.01 | MsG0780036139.01 | 0.816137 | 6.458474e-52 | 4.538874e-49 |
| MsG0180001213.01 | MsG0780036705.01 | 0.872812 | 2.385558e-67 | 1.011923e-63 |
| MsG0180001213.01 | MsG0780036813.01 | 0.867062 | 1.804350e-65 | 6.215937e-62 |
| MsG0180001213.01 | MsG0780037512.01 | 0.818868 | 1.565636e-52 | 1.185980e-49 |
| MsG0180001213.01 | MsG0780038645.01 | 0.815389 | 9.481680e-52 | 6.528300e-49 |
| MsG0180001213.01 | MsG0780039258.01 | 0.830335 | 3.112827e-55 | 3.269886e-52 |
| MsG0180001213.01 | MsG0780039841.01 | 0.828906 | 6.929732e-55 | 6.981651e-52 |
| MsG0180001213.01 | MsG0780040445.01 | 0.835379 | 1.736823e-56 | 2.120221e-53 |
| MsG0180001213.01 | MsG0780040861.01 | 0.834997 | 2.168307e-56 | 2.616665e-53 |
| MsG0180001213.01 | MsG0780041137.01 | 0.802518 | 5.400424e-49 | 2.650686e-46 |
| MsG0180001213.01 | MsG0780041294.01 | 0.863435 | 2.495035e-64 | 7.562197e-61 |
| MsG0180001213.01 | MsG0780041295.01 | 0.804384 | 2.216535e-49 | 1.141274e-46 |
| MsG0180001213.01 | MsG0780041345.01 | 0.867801 | 1.047236e-65 | 3.703101e-62 |
| MsG0180001213.01 | MsG0780041402.01 | 0.834471 | 2.940154e-56 | 3.492795e-53 |
| MsG0180001213.01 | MsG0780041555.01 | 0.829538 | 4.866476e-55 | 4.995107e-52 |
| MsG0180001213.01 | MsG0880042232.01 | 0.802979 | 4.337781e-49 | 2.154259e-46 |
| MsG0180001213.01 | MsG0880042294.01 | 0.861638 | 8.911919e-64 | 2.538354e-60 |
| MsG0180001213.01 | MsG0880042314.01 | 0.862835 | 3.825497e-64 | 1.136015e-60 |
| MsG0180001213.01 | MsG0880042404.01 | 0.844865 | 5.801574e-59 | 9.492643e-56 |
| MsG0180001213.01 | MsG0880042915.01 | 0.802296 | 6.002227e-49 | 2.929676e-46 |
| MsG0180001213.01 | MsG0880043002.01 | 0.803466 | 3.440208e-49 | 1.730013e-46 |
| MsG0180001213.01 | MsG0880043003.01 | 0.818327 | 2.076487e-52 | 1.549609e-49 |
| MsG0180001213.01 | MsG0880043835.01 | 0.807443 | 5.041824e-50 | 2.808579e-47 |
| MsG0180001213.01 | MsG0880043887.01 | 0.809351 | 1.974850e-50 | 1.156888e-47 |
| MsG0180001213.01 | MsG0880046126.01 | 0.800044 | 1.733329e-48 | 7.990474e-46 |
| MsG0180001213.01 | MsG0880046285.01 | 0.888135 | 7.721065e-73 | 5.906371e-69 |
| MsG0180001213.01 | MsG0880046321.01 | 0.905414 | 4.403353e-80 | 7.113373e-76 |
| MsG0180001213.01 | MsG0880046328.01 | 0.850773 | 1.367109e-60 | 2.707446e-57 |
| MsG0180001213.01 | MsG0880046575.01 | 0.822974 | 1.777381e-53 | 1.510500e-50 |
| MsG0180001213.01 | MsG0880046930.01 | 0.830715 | 2.512085e-55 | 2.668417e-52 |
| MsG0180001213.01 | MsG0880046973.01 | 0.800915 | 1.152129e-48 | 5.430156e-46 |
| MsG0180001213.01 | MsG0880047038.01 | 0.830384 | 3.027903e-55 | 3.185112e-52 |
| MsG0180001213.01 | MsG0880047116.01 | 0.843939 | 1.028997e-58 | 1.635640e-55 |
| MsG0180001213.01 | MsG0880047286.01 | 0.851991 | 6.184522e-61 | 1.273774e-57 |
| MsG0180001213.01 | MsG0880047427.01 | 0.846573 | 1.995926e-59 | 3.450264e-56 |
| MsG0180001213.01 | MsG0880047448.01 | 0.872103 | 4.111933e-67 | 1.699139e-63 |
| MsG0180001213.01 | MsG0880047607.01 | 0.826300 | 2.926727e-54 | 2.733907e-51 |
| MsG0180001213.01 | MsG0880047608.01 | 0.810554 | 1.088189e-50 | 6.579593e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001213.01.T01 | MTR_5g020440 | 83.186 | 226 | 19 | 2 | 107 | 332 | 215 | 421 | 6.36e-127 | 370 |
| MsG0180001213.01.T01 | MTR_6g024095 | 82.743 | 226 | 20 | 2 | 107 | 332 | 211 | 417 | 2.68e-126 | 368 |
| MsG0180001213.01.T01 | MTR_1g033240 | 80.973 | 226 | 24 | 2 | 107 | 332 | 185 | 391 | 1.06e-120 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001213.01.T01 | AT1G30960 | 66.814 | 226 | 56 | 2 | 107 | 332 | 231 | 437 | 4.86e-98 | 296 |
Find 91 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGGCGTTTCATGATATC+TGG | 0.252865 | 1:-17466566 | MsG0180001213.01.T01:intron |
| ACTTCCTCGGTCATGGTAAA+TGG | 0.262332 | 1:+17466201 | None:intergenic |
| GGCATTTGGTTGTATGAAAA+TGG | 0.293668 | 1:-17465034 | MsG0180001213.01.T01:three_prime_UTR |
| GCAAGTGCATCTAGTTCTTC+AGG | 0.309721 | 1:-17465440 | MsG0180001213.01.T01:CDS |
| CACTTTCTCACTAACAAATT+AGG | 0.329869 | 1:-17465938 | MsG0180001213.01.T01:CDS |
| ATTAACGAGGCGAATATCTT+TGG | 0.332434 | 1:-17465404 | MsG0180001213.01.T01:three_prime_UTR |
| TCCGGCAATCAAATAGTAAA+AGG | 0.333098 | 1:+17465181 | None:intergenic |
| GGAGCCCAGAGCCGTTGTTC+TGG | 0.344613 | 1:-17467773 | MsG0180001213.01.T01:CDS |
| AGTTGCGAGATGGTTCTCTT+AGG | 0.351624 | 1:-17465970 | MsG0180001213.01.T01:CDS |
| GAAGAATTCGAAGATCTTCC+TGG | 0.354726 | 1:-17466721 | MsG0180001213.01.T01:CDS |
| CCTGTTCTCAGGCAAGGTTT+TGG | 0.367068 | 1:+17465281 | None:intergenic |
| AGATTTGACTCAGTTCTTGA+TGG | 0.373919 | 1:-17466522 | MsG0180001213.01.T01:CDS |
| AAAAGCACAACTAGGGCATT+TGG | 0.377310 | 1:-17465048 | MsG0180001213.01.T01:three_prime_UTR |
| CCAAAACCTTGCCTGAGAAC+AGG | 0.379764 | 1:-17465281 | MsG0180001213.01.T01:three_prime_UTR |
| ACGTGCCAGAACAACGGCTC+TGG | 0.389658 | 1:+17467768 | None:intergenic |
| GCACTAACACTCATAGGTTT+AGG | 0.390529 | 1:-17467063 | MsG0180001213.01.T01:CDS |
| TGTTTGTTTAACAGGAGAAT+AGG | 0.397704 | 1:-17465502 | MsG0180001213.01.T01:intron |
| TTGAATCAGGCCTATATTGA+TGG | 0.415590 | 1:+17466860 | None:intergenic |
| AATGTATAACATTAAAAGAA+TGG | 0.443195 | 1:+17466939 | None:intergenic |
| TAAAAGGCATAACAAATTGC+CGG | 0.447697 | 1:+17465197 | None:intergenic |
| TTGTATACAAATTATAGTAT+TGG | 0.449105 | 1:-17466462 | MsG0180001213.01.T01:intron |
| GTTAGTGCTTCATACTGCTT+GGG | 0.450888 | 1:+17467078 | None:intergenic |
| CTATTTGATTGCCGGAGTCT+AGG | 0.452398 | 1:-17465174 | MsG0180001213.01.T01:three_prime_UTR |
| ATAAGTGCTATGGAAGAAAC+AGG | 0.452402 | 1:-17465243 | MsG0180001213.01.T01:three_prime_UTR |
| AAAATGGTGAGATACGAGTT+TGG | 0.461973 | 1:-17465018 | MsG0180001213.01.T01:three_prime_UTR |
| TATGAAGCACTAACACTCAT+AGG | 0.463615 | 1:-17467069 | MsG0180001213.01.T01:CDS |
| GGCCAACTCAAGATTCTTGT+GGG | 0.471826 | 1:-17465917 | MsG0180001213.01.T01:CDS |
| GTGTAATTCACACACCCCTT+TGG | 0.476630 | 1:+17465328 | None:intergenic |
| TGTTAGTGCTTCATACTGCT+TGG | 0.478083 | 1:+17467077 | None:intergenic |
| TTTCATGATATCTGGAATGA+AGG | 0.478892 | 1:-17466558 | MsG0180001213.01.T01:CDS |
| AATAGGCAGTAGAACGGCCC+TGG | 0.484531 | 1:-17466233 | MsG0180001213.01.T01:intron |
| TCTATGATGACCCTGTTCTC+AGG | 0.485261 | 1:+17465270 | None:intergenic |
| GTGTATTATAAGAATCAAAC+AGG | 0.485502 | 1:+17467005 | None:intergenic |
| GACTCAGTTCTTGATGGAGC+AGG | 0.486458 | 1:-17466516 | MsG0180001213.01.T01:CDS |
| GTTGTTGGACCATGTACATC+AGG | 0.487956 | 1:-17466142 | MsG0180001213.01.T01:intron |
| CATAGATAAAATAAGTGCTA+TGG | 0.488073 | 1:-17465253 | MsG0180001213.01.T01:three_prime_UTR |
| CATTAGAAGTTGTGCGTGAA+AGG | 0.488172 | 1:-17466164 | MsG0180001213.01.T01:CDS |
| AGACCTTACCTTTCAAATCC+AGG | 0.490953 | 1:+17466703 | None:intergenic |
| TTTCATAACTTCCTCGGTCA+TGG | 0.497634 | 1:+17466194 | None:intergenic |
| TGCAGAGAAGATATTAGATC+TGG | 0.502034 | 1:-17467695 | MsG0180001213.01.T01:intron |
| AATAATGAGGAATGAAAAGA+GGG | 0.502331 | 1:-17468115 | None:intergenic |
| AACCTATGTTCAATATCGTA+TGG | 0.502441 | 1:+17466007 | None:intergenic |
| CGTGCCAGAACAACGGCTCT+GGG | 0.505848 | 1:+17467769 | None:intergenic |
| TTGAACATAGGTTGATTGAC+TGG | 0.510746 | 1:-17465997 | MsG0180001213.01.T01:CDS |
| GCGGCGAAATTAGATGTGTT+AGG | 0.514495 | 1:-17467736 | MsG0180001213.01.T01:CDS |
| TTAGGGTGTCGATGGGTCAT+TGG | 0.517366 | 1:-17467103 | MsG0180001213.01.T01:intron |
| GTATGTGGTTGTAGAACAAT+CGG | 0.518072 | 1:-17467794 | MsG0180001213.01.T01:intron |
| TTCATGATATCTGGAATGAA+GGG | 0.518749 | 1:-17466557 | MsG0180001213.01.T01:CDS |
| AGTTGTGCGTGAAAGGTTGT+TGG | 0.519289 | 1:-17466157 | MsG0180001213.01.T01:CDS |
| GGTTGTTTATGAAAATTGAA+AGG | 0.524496 | 1:-17465128 | MsG0180001213.01.T01:three_prime_UTR |
| GGTAAATGGATCTTCTTCCC+AGG | 0.528565 | 1:+17466215 | None:intergenic |
| GCAGCATGTAAAATGCCAAA+GGG | 0.531201 | 1:-17465343 | MsG0180001213.01.T01:three_prime_UTR |
| CAAAACCTTGCCTGAGAACA+GGG | 0.533313 | 1:-17465280 | MsG0180001213.01.T01:three_prime_UTR |
| TGTAAAACTGATCAAGCGAA+TGG | 0.536305 | 1:-17466833 | MsG0180001213.01.T01:CDS |
| AAGATCTTCCTGGATTTGAA+AGG | 0.540512 | 1:-17466711 | MsG0180001213.01.T01:intron |
| AGGCCAACTCAAGATTCTTG+TGG | 0.543483 | 1:-17465918 | MsG0180001213.01.T01:CDS |
| TCCCCACAAGAATCTTGAGT+TGG | 0.544132 | 1:+17465915 | None:intergenic |
| AAGAAACAGGTTGAGTTCGT+TGG | 0.544765 | 1:-17465230 | MsG0180001213.01.T01:three_prime_UTR |
| AAATAATGAGGAATGAAAAG+AGG | 0.548756 | 1:-17468116 | None:intergenic |
| GTAAAACTGATCAAGCGAAT+GGG | 0.549419 | 1:-17466832 | MsG0180001213.01.T01:CDS |
| GGAAGCTTCGATGACTTCAA+AGG | 0.550524 | 1:+17465302 | None:intergenic |
| TAACAATTACCTGATGTACA+TGG | 0.559315 | 1:+17466133 | None:intergenic |
| TATAAGAATCAAACAGGCAT+CGG | 0.563888 | 1:+17467011 | None:intergenic |
| GTGATGTATTAGGGTGTCGA+TGG | 0.567539 | 1:-17467111 | MsG0180001213.01.T01:intron |
| AAGATTCTTGTGGGGAAGCG+TGG | 0.571176 | 1:-17465908 | MsG0180001213.01.T01:CDS |
| GACTGGAAAGAGTTGCGAGA+TGG | 0.578343 | 1:-17465980 | MsG0180001213.01.T01:CDS |
| TGCAGCATGTAAAATGCCAA+AGG | 0.579327 | 1:-17465344 | MsG0180001213.01.T01:three_prime_UTR |
| TAGAAGCTAATGAAGAGCTA+AGG | 0.579922 | 1:-17465477 | MsG0180001213.01.T01:CDS |
| GATGACCCTGTTCTCAGGCA+AGG | 0.582636 | 1:+17465275 | None:intergenic |
| TTCCATACGATATTGAACAT+AGG | 0.595384 | 1:-17466009 | MsG0180001213.01.T01:CDS |
| TGATCAAGCGAATGGGAGAA+CGG | 0.601143 | 1:-17466825 | MsG0180001213.01.T01:CDS |
| ATAGGCAGTAGAACGGCCCT+GGG | 0.601733 | 1:-17466232 | MsG0180001213.01.T01:intron |
| AAAATTGAGTTCCTAGACTC+CGG | 0.604158 | 1:+17465163 | None:intergenic |
| GTAAATGGATCTTCTTCCCA+GGG | 0.615060 | 1:+17466216 | None:intergenic |
| GTTAGGCGGAGAGAAAGAAC+TGG | 0.615640 | 1:-17467719 | MsG0180001213.01.T01:CDS |
| TTATGCAATAGGCAGTAGAA+CGG | 0.620601 | 1:-17466239 | MsG0180001213.01.T01:intron |
| TCATGATATCTGGAATGAAG+GGG | 0.634102 | 1:-17466556 | MsG0180001213.01.T01:CDS |
| CTAACACTCATAGGTTTAGG+TGG | 0.643026 | 1:-17467060 | MsG0180001213.01.T01:CDS |
| TCTGGCACGTCGTTGTGCTG+CGG | 0.644935 | 1:-17467755 | MsG0180001213.01.T01:CDS |
| GAATGTATAACACTTGTCTG+AGG | 0.648093 | 1:+17466964 | None:intergenic |
| ACAACGACGTGCCAGAACAA+CGG | 0.664020 | 1:+17467762 | None:intergenic |
| TCTGCAACATGTCGAACATG+TGG | 0.672565 | 1:+17467036 | None:intergenic |
| CATGATATCTGGAATGAAGG+GGG | 0.674998 | 1:-17466555 | MsG0180001213.01.T01:CDS |
| TGATGTATTAGGGTGTCGAT+GGG | 0.678331 | 1:-17467110 | MsG0180001213.01.T01:intron |
| GCCAACTCAAGATTCTTGTG+GGG | 0.679081 | 1:-17465916 | MsG0180001213.01.T01:CDS |
| CAGCATGTAAAATGCCAAAG+GGG | 0.686050 | 1:-17465342 | MsG0180001213.01.T01:three_prime_UTR |
| AGATCCATTTACCATGACCG+AGG | 0.703637 | 1:-17466205 | MsG0180001213.01.T01:CDS |
| GTTCGTTGGTGATCTCACGC+CGG | 0.719291 | 1:-17465216 | MsG0180001213.01.T01:three_prime_UTR |
| ATGCTGCATAACATGGTGTG+TGG | 0.722838 | 1:+17465359 | None:intergenic |
| GCGAAATTAGATGTGTTAGG+CGG | 0.730506 | 1:-17467733 | MsG0180001213.01.T01:CDS |
| TTAAGCTCAAATGATTAACG+AGG | 0.772446 | 1:-17465417 | MsG0180001213.01.T01:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTATAACATTAAAAGAA+TGG | + | Chr1:17466155-17466174 | None:intergenic | 15.0% |
| !! | AATTGTGATTCTATATTTAA+AGG | + | Chr1:17466707-17466726 | None:intergenic | 15.0% |
| !! | TTGTATACAAATTATAGTAT+TGG | - | Chr1:17466629-17466648 | MsG0180001213.01.T01:intron | 15.0% |
| !!! | TATTGGCTATTTTATTATTT+AGG | - | Chr1:17466508-17466527 | MsG0180001213.01.T01:CDS | 15.0% |
| !! | ATTGATGGAATGTTAAAAAA+CGG | + | Chr1:17466219-17466238 | None:intergenic | 20.0% |
| !! | CGATTAATTAAAGTTTCTAT+GGG | - | Chr1:17467469-17467488 | MsG0180001213.01.T01:intron | 20.0% |
| !! | GATAAATAATAGAGAAAAGT+TGG | + | Chr1:17465729-17465748 | None:intergenic | 20.0% |
| !! | GATTAATTAAAGTTTCTATG+GGG | - | Chr1:17467470-17467489 | MsG0180001213.01.T01:intron | 20.0% |
| !! | TCGATTAATTAAAGTTTCTA+TGG | - | Chr1:17467468-17467487 | MsG0180001213.01.T01:intron | 20.0% |
| !! | TGAGTTTAGACATAAAATAT+GGG | - | Chr1:17467306-17467325 | MsG0180001213.01.T01:intron | 20.0% |
| !! | TTGAGTTTAGACATAAAATA+TGG | - | Chr1:17467305-17467324 | MsG0180001213.01.T01:intron | 20.0% |
| !!! | AATAATGTCATATCTAAAAC+AGG | + | Chr1:17467272-17467291 | None:intergenic | 20.0% |
| !!! | AGTTTCATATTTGGAATTTT+CGG | + | Chr1:17465586-17465605 | None:intergenic | 20.0% |
| !!! | CTCAATTTTCTTTAAGTTTA+TGG | - | Chr1:17467942-17467961 | MsG0180001213.01.T01:intron | 20.0% |
| !!! | TGTTTTAGATATGACATTAT+TGG | - | Chr1:17467271-17467290 | MsG0180001213.01.T01:intron | 20.0% |
| !!! | TTAATTGTTTGTTATGCAAT+AGG | - | Chr1:17466841-17466860 | MsG0180001213.01.T01:CDS | 20.0% |
| !!! | TTATAGTATTGGTAACTTAA+AGG | - | Chr1:17466640-17466659 | MsG0180001213.01.T01:intron | 20.0% |
| !!! | TTTTAACATTCCATCAATAT+AGG | - | Chr1:17466221-17466240 | MsG0180001213.01.T01:CDS | 20.0% |
| !!! | TTTTATAAAAAGCACAACTA+GGG | - | Chr1:17468036-17468055 | MsG0180001213.01.T01:intron | 20.0% |
| ! | AAGAAACTGAAGTAAATAAG+AGG | + | Chr1:17467534-17467553 | None:intergenic | 25.0% |
| ! | AAGATATGATTTAGATCTGA+AGG | - | Chr1:17465221-17465240 | MsG0180001213.01.T01:three_prime_UTR | 25.0% |
| ! | ACTTTAATTAATCGACCAAA+AGG | + | Chr1:17467463-17467482 | None:intergenic | 25.0% |
| ! | ATTATTTATCCAAGCAAAGA+TGG | - | Chr1:17465739-17465758 | MsG0180001213.01.T01:intron | 25.0% |
| ! | CATAGATAAAATAAGTGCTA+TGG | - | Chr1:17467838-17467857 | MsG0180001213.01.T01:intron | 25.0% |
| ! | CTGTTAAACAAACATGAATA+GGG | + | Chr1:17467583-17467602 | None:intergenic | 25.0% |
| ! | GAAAAACAAATTCATATGCA+TGG | + | Chr1:17466744-17466763 | None:intergenic | 25.0% |
| ! | GGTTGTTTATGAAAATTGAA+AGG | - | Chr1:17467963-17467982 | MsG0180001213.01.T01:intron | 25.0% |
| ! | GTGATTCTATATTTAAAGGT+GGG | + | Chr1:17466703-17466722 | None:intergenic | 25.0% |
| ! | GTGTATTATAAGAATCAAAC+AGG | + | Chr1:17466089-17466108 | None:intergenic | 25.0% |
| ! | TAAAATCCAATGTTAAGTCT+TGG | + | Chr1:17466824-17466843 | None:intergenic | 25.0% |
| ! | TAACAAATGAATTCAGTTGT+AGG | - | Chr1:17465072-17465091 | MsG0180001213.01.T01:three_prime_UTR | 25.0% |
| ! | TGCTGTTGTATTAAGATTAA+GGG | - | Chr1:17466414-17466433 | MsG0180001213.01.T01:intron | 25.0% |
| ! | TGTGATTCTATATTTAAAGG+TGG | + | Chr1:17466704-17466723 | None:intergenic | 25.0% |
| ! | TGTTAAACAAACATGAATAG+GGG | + | Chr1:17467582-17467601 | None:intergenic | 25.0% |
| ! | TTTAACACGAGTTTCATATT+TGG | + | Chr1:17465595-17465614 | None:intergenic | 25.0% |
| !! | AAACATCAATGTTCTTTTCT+GGG | - | Chr1:17466663-17466682 | MsG0180001213.01.T01:intron | 25.0% |
| !! | CTAATTGATAGCTAGAATTT+AGG | - | Chr1:17466996-17467015 | MsG0180001213.01.T01:CDS | 25.0% |
| !! | GATTAGATGATAGTGTTTAT+TGG | - | Chr1:17467034-17467053 | MsG0180001213.01.T01:CDS | 25.0% |
| !! | TATCATTTTCATAACTTCCT+CGG | + | Chr1:17466906-17466925 | None:intergenic | 25.0% |
| !! | TTGCTGTTGTATTAAGATTA+AGG | - | Chr1:17466413-17466432 | MsG0180001213.01.T01:intron | 25.0% |
| !!! | CATAGTCTTATTTAATCCAA+CGG | - | Chr1:17465442-17465461 | MsG0180001213.01.T01:CDS | 25.0% |
| !!! | GTTTCATATTTGGAATTTTC+GGG | + | Chr1:17465585-17465604 | None:intergenic | 25.0% |
| !!! | GTTTTATAAAAAGCACAACT+AGG | - | Chr1:17468035-17468054 | MsG0180001213.01.T01:intron | 25.0% |
| !!! | TTTCATATTTGGAATTTTCG+GGG | + | Chr1:17465584-17465603 | None:intergenic | 25.0% |
| !!! | TTTCTTTGGGTTTAGTTTTT+GGG | - | Chr1:17465104-17465123 | MsG0180001213.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTCTTTGGGTTTAGTTTT+TGG | - | Chr1:17465103-17465122 | MsG0180001213.01.T01:three_prime_UTR | 25.0% |
| AAAATTGTTTACCCTGAATC+TGG | - | Chr1:17465612-17465631 | MsG0180001213.01.T01:intron | 30.0% | |
| AAACATACAACAGAAACAGA+TGG | + | Chr1:17467348-17467367 | None:intergenic | 30.0% | |
| AACCTATGTTCAATATCGTA+TGG | + | Chr1:17467087-17467106 | None:intergenic | 30.0% | |
| ATTAAGATTAAGGGAAACAC+TGG | - | Chr1:17466423-17466442 | MsG0180001213.01.T01:intron | 30.0% | |
| CACTAGGGATTATTATATGA+AGG | + | Chr1:17465961-17465980 | None:intergenic | 30.0% | |
| CACTTTCTCACTAACAAATT+AGG | - | Chr1:17467153-17467172 | MsG0180001213.01.T01:intron | 30.0% | |
| CCTATTCATGTTTGTTTAAC+AGG | - | Chr1:17467581-17467600 | MsG0180001213.01.T01:intron | 30.0% | |
| CCTGTTAAACAAACATGAAT+AGG | + | Chr1:17467584-17467603 | None:intergenic | 30.0% | |
| CTCTGATGATAAATTCAAGT+AGG | - | Chr1:17465012-17465031 | MsG0180001213.01.T01:three_prime_UTR | 30.0% | |
| GAAAAAGAAAGACTTATCGA+AGG | - | Chr1:17466342-17466361 | MsG0180001213.01.T01:intron | 30.0% | |
| GGAATGTTAAAAAACGGAAT+GGG | + | Chr1:17466213-17466232 | None:intergenic | 30.0% | |
| TAACAATTACCTGATGTACA+TGG | + | Chr1:17466961-17466980 | None:intergenic | 30.0% | |
| TAGCTATCAATTAGAAGAAC+AGG | + | Chr1:17466990-17467009 | None:intergenic | 30.0% | |
| TATAAGAATCAAACAGGCAT+CGG | + | Chr1:17466083-17466102 | None:intergenic | 30.0% | |
| TGAATTCAGTTGTAGGAATT+AGG | - | Chr1:17465079-17465098 | MsG0180001213.01.T01:three_prime_UTR | 30.0% | |
| TGGAATGTTAAAAAACGGAA+TGG | + | Chr1:17466214-17466233 | None:intergenic | 30.0% | |
| TGTCTGCTTAACTTATAGTT+GGG | - | Chr1:17465911-17465930 | MsG0180001213.01.T01:CDS | 30.0% | |
| TGTTTGTTTAACAGGAGAAT+AGG | - | Chr1:17467589-17467608 | MsG0180001213.01.T01:intron | 30.0% | |
| TTAAGCTCAAATGATTAACG+AGG | - | Chr1:17467674-17467693 | MsG0180001213.01.T01:intron | 30.0% | |
| TTCCATACGATATTGAACAT+AGG | - | Chr1:17467082-17467101 | MsG0180001213.01.T01:CDS | 30.0% | |
| TTGTCTGCTTAACTTATAGT+TGG | - | Chr1:17465910-17465929 | MsG0180001213.01.T01:CDS | 30.0% | |
| TTTGAGTATGAAGATTAGAC+AGG | - | Chr1:17467397-17467416 | MsG0180001213.01.T01:intron | 30.0% | |
| ! | AGTTTTACAACTCTTGAATC+AGG | + | Chr1:17466247-17466266 | None:intergenic | 30.0% |
| ! | ATTTTACATGCTGCATAACA+TGG | + | Chr1:17467742-17467761 | None:intergenic | 30.0% |
| ! | CTTCTTAAACTTGCTTCTAT+TGG | - | Chr1:17466491-17466510 | MsG0180001213.01.T01:CDS | 30.0% |
| ! | GAAACATCAATGTTCTTTTC+TGG | - | Chr1:17466662-17466681 | MsG0180001213.01.T01:intron | 30.0% |
| ! | GCTAACAATTTTCTCAATTC+AGG | - | Chr1:17467056-17467075 | MsG0180001213.01.T01:CDS | 30.0% |
| ! | TAAAAGGCATAACAAATTGC+CGG | + | Chr1:17467897-17467916 | None:intergenic | 30.0% |
| ! | TAGGAATTAGGCTTTTCTTT+GGG | - | Chr1:17465091-17465110 | MsG0180001213.01.T01:three_prime_UTR | 30.0% |
| ! | TTCATGATATCTGGAATGAA+GGG | - | Chr1:17466534-17466553 | MsG0180001213.01.T01:CDS | 30.0% |
| ! | TTTCATGATATCTGGAATGA+AGG | - | Chr1:17466533-17466552 | MsG0180001213.01.T01:CDS | 30.0% |
| !! | AAGTTTTGACCTATGGAAAA+TGG | + | Chr1:17467379-17467398 | None:intergenic | 30.0% |
| !! | AGTTTTGACCTATGGAAAAT+GGG | + | Chr1:17467378-17467397 | None:intergenic | 30.0% |
| !! | ATACTCAAAGTTTTGACCTA+TGG | + | Chr1:17467386-17467405 | None:intergenic | 30.0% |
| !! | ATCTGTTTCTGTTGTATGTT+TGG | - | Chr1:17467347-17467366 | MsG0180001213.01.T01:intron | 30.0% |
| !! | CTCTTGATAACCATTTTAAG+TGG | + | Chr1:17465687-17465706 | None:intergenic | 30.0% |
| !! | TTTGATTTGAATGCTGAGTA+TGG | - | Chr1:17465824-17465843 | MsG0180001213.01.T01:intron | 30.0% |
| !!! | AACAATGCAGTCACTTTTAT+AGG | + | Chr1:17465645-17465664 | None:intergenic | 30.0% |
| !!! | ATAGTTTTGTCCTGTTATCT+TGG | - | Chr1:17466793-17466812 | MsG0180001213.01.T01:CDS | 30.0% |
| !!! | ATGCACTTGCTTTTTGAAAA+TGG | + | Chr1:17467641-17467660 | None:intergenic | 30.0% |
| !!! | TCTCGTTTTTTATCCATCTT+AGG | - | Chr1:17467502-17467521 | MsG0180001213.01.T01:intron | 30.0% |
| AAAATGGTGAGATACGAGTT+TGG | - | Chr1:17468073-17468092 | MsG0180001213.01.T01:intron | 35.0% | |
| AAAATTGAGTTCCTAGACTC+CGG | + | Chr1:17467931-17467950 | None:intergenic | 35.0% | |
| AAGATCTTCCTGGATTTGAA+AGG | - | Chr1:17466380-17466399 | MsG0180001213.01.T01:intron | 35.0% | |
| AATCCCTAGTGTGATGTATT+AGG | - | Chr1:17465970-17465989 | MsG0180001213.01.T01:CDS | 35.0% | |
| ACCAAACTATATTTGACCGT+TGG | + | Chr1:17465461-17465480 | None:intergenic | 35.0% | |
| AGATCTGAAGGCAAAATGAT+TGG | - | Chr1:17465233-17465252 | MsG0180001213.01.T01:three_prime_UTR | 35.0% | |
| AGATTTGACTCAGTTCTTGA+TGG | - | Chr1:17466569-17466588 | MsG0180001213.01.T01:intron | 35.0% | |
| ATAAGTGCTATGGAAGAAAC+AGG | - | Chr1:17467848-17467867 | MsG0180001213.01.T01:intron | 35.0% | |
| ATCAATGACTGACTAAGATG+AGG | + | Chr1:17465877-17465896 | None:intergenic | 35.0% | |
| ATCCCTAGTGTGATGTATTA+GGG | - | Chr1:17465971-17465990 | MsG0180001213.01.T01:CDS | 35.0% | |
| ATCTAATCCTACAGCATACT+TGG | + | Chr1:17467022-17467041 | None:intergenic | 35.0% | |
| ATCTGGTATGCTCACAAATA+AGG | - | Chr1:17465413-17465432 | MsG0180001213.01.T01:exon | 35.0% | |
| ATTAACGAGGCGAATATCTT+TGG | - | Chr1:17467687-17467706 | MsG0180001213.01.T01:intron | 35.0% | |
| CAAAATGATTGGAACTTGTG+GGG | - | Chr1:17465244-17465263 | MsG0180001213.01.T01:three_prime_UTR | 35.0% | |
| CTCTTGAATGAATAATGCTC+TGG | + | Chr1:17465194-17465213 | None:intergenic | 35.0% | |
| GAAACAGATGGAGATATCTA+CGG | + | Chr1:17467336-17467355 | None:intergenic | 35.0% | |
| GAATGTATAACACTTGTCTG+AGG | + | Chr1:17466130-17466149 | None:intergenic | 35.0% | |
| GAGGAGTAAATATTCGTATG+TGG | - | Chr1:17465282-17465301 | MsG0180001213.01.T01:three_prime_UTR | 35.0% | |
| GCAAAATGATTGGAACTTGT+GGG | - | Chr1:17465243-17465262 | MsG0180001213.01.T01:three_prime_UTR | 35.0% | |
| GGCATTTGGTTGTATGAAAA+TGG | - | Chr1:17468057-17468076 | MsG0180001213.01.T01:intron | 35.0% | |
| GTAAAACTGATCAAGCGAAT+GGG | - | Chr1:17466259-17466278 | MsG0180001213.01.T01:intron | 35.0% | |
| GTATGTGGTTGTAGAACAAT+CGG | - | Chr1:17465297-17465316 | MsG0180001213.01.T01:three_prime_UTR | 35.0% | |
| TAAGAGGTTCTATCCTAAGA+TGG | + | Chr1:17467518-17467537 | None:intergenic | 35.0% | |
| TAGAAGCTAATGAAGAGCTA+AGG | - | Chr1:17467614-17467633 | MsG0180001213.01.T01:intron | 35.0% | |
| TCAAACACAATTGTCAGAGT+AGG | + | Chr1:17465526-17465545 | None:intergenic | 35.0% | |
| TCCAACGGTCAAATATAGTT+TGG | - | Chr1:17465457-17465476 | MsG0180001213.01.T01:CDS | 35.0% | |
| TCCGGCAATCAAATAGTAAA+AGG | + | Chr1:17467913-17467932 | None:intergenic | 35.0% | |
| TGACTGCATTGTTGCTAAAT+TGG | - | Chr1:17465652-17465671 | MsG0180001213.01.T01:intron | 35.0% | |
| TGCAGAGAAGATATTAGATC+TGG | - | Chr1:17465396-17465415 | MsG0180001213.01.T01:three_prime_UTR | 35.0% | |
| TGTAAAACTGATCAAGCGAA+TGG | - | Chr1:17466258-17466277 | MsG0180001213.01.T01:intron | 35.0% | |
| TTATGCAATAGGCAGTAGAA+CGG | - | Chr1:17466852-17466871 | MsG0180001213.01.T01:CDS | 35.0% | |
| TTGAATCAGGCCTATATTGA+TGG | + | Chr1:17466234-17466253 | None:intergenic | 35.0% | |
| TTTAGGCGTTTCATGATATC+TGG | - | Chr1:17466525-17466544 | MsG0180001213.01.T01:CDS | 35.0% | |
| ! | AATAATGCTCTGGTAGTGTA+TGG | + | Chr1:17465184-17465203 | None:intergenic | 35.0% |
| ! | ATAATGCTCTGGTAGTGTAT+GGG | + | Chr1:17465183-17465202 | None:intergenic | 35.0% |
| ! | ATAGGCTTTTTACCAGATTC+AGG | + | Chr1:17465627-17465646 | None:intergenic | 35.0% |
| ! | GCCTTTTACTATTTGATTGC+CGG | - | Chr1:17467909-17467928 | MsG0180001213.01.T01:intron | 35.0% |
| ! | GCTTCATTTGCCACTTAAAA+TGG | - | Chr1:17465674-17465693 | MsG0180001213.01.T01:intron | 35.0% |
| ! | GTAGGAATTAGGCTTTTCTT+TGG | - | Chr1:17465090-17465109 | MsG0180001213.01.T01:three_prime_UTR | 35.0% |
| ! | TAGGCTTTTTACCAGATTCA+GGG | + | Chr1:17465626-17465645 | None:intergenic | 35.0% |
| ! | TATGAAGCACTAACACTCAT+AGG | - | Chr1:17466022-17466041 | MsG0180001213.01.T01:intron | 35.0% |
| ! | TCATGATATCTGGAATGAAG+GGG | - | Chr1:17466535-17466554 | MsG0180001213.01.T01:CDS | 35.0% |
| !! | AGATGGAATTGATGACCTTT+TGG | - | Chr1:17467445-17467464 | MsG0180001213.01.T01:intron | 35.0% |
| !! | CACAAAACTCGCTTTTGATT+TGG | + | Chr1:17466298-17466317 | None:intergenic | 35.0% |
| !! | TTGAACATAGGTTGATTGAC+TGG | - | Chr1:17467094-17467113 | MsG0180001213.01.T01:CDS | 35.0% |
| !!! | AACTCGCTTTTGATTTGGAA+TGG | + | Chr1:17466293-17466312 | None:intergenic | 35.0% |
| AAACATGAATAGGGGATGAG+AGG | + | Chr1:17467574-17467593 | None:intergenic | 40.0% | |
| AACACAATTGTCAGAGTAGG+TGG | + | Chr1:17465523-17465542 | None:intergenic | 40.0% | |
| AACATGAATAGGGGATGAGA+GGG | + | Chr1:17467573-17467592 | None:intergenic | 40.0% | |
| AACATGGTGTGTGGCAAAAA+AGG | + | Chr1:17467726-17467745 | None:intergenic | 40.0% | |
| ACACCCTAATACATCACACT+AGG | + | Chr1:17465977-17465996 | None:intergenic | 40.0% | |
| AGACCTTACCTTTCAAATCC+AGG | + | Chr1:17466391-17466410 | None:intergenic | 40.0% | |
| ATAGTTTGGTACACCGATGA+GGG | - | Chr1:17465471-17465490 | MsG0180001213.01.T01:CDS | 40.0% | |
| ATTTAGGCCAAGTATGCTGT+AGG | - | Chr1:17467012-17467031 | MsG0180001213.01.T01:CDS | 40.0% | |
| CACCCTAATACATCACACTA+GGG | + | Chr1:17465976-17465995 | None:intergenic | 40.0% | |
| CAGCATGTAAAATGCCAAAG+GGG | - | Chr1:17467749-17467768 | MsG0180001213.01.T01:CDS | 40.0% | |
| CATTAGAAGTTGTGCGTGAA+AGG | - | Chr1:17466927-17466946 | MsG0180001213.01.T01:CDS | 40.0% | |
| CTAACACTCATAGGTTTAGG+TGG | - | Chr1:17466031-17466050 | MsG0180001213.01.T01:intron | 40.0% | |
| CTTCCTGGATTTGAAAGGTA+AGG | - | Chr1:17466385-17466404 | MsG0180001213.01.T01:intron | 40.0% | |
| GAAGAATTCGAAGATCTTCC+TGG | - | Chr1:17466370-17466389 | MsG0180001213.01.T01:intron | 40.0% | |
| GACACTCCAAGACTTAACAT+TGG | - | Chr1:17466815-17466834 | MsG0180001213.01.T01:CDS | 40.0% | |
| GACTCTTCTTTGAACTCAGA+TGG | - | Chr1:17467428-17467447 | MsG0180001213.01.T01:intron | 40.0% | |
| GCACTAACACTCATAGGTTT+AGG | - | Chr1:17466028-17466047 | MsG0180001213.01.T01:intron | 40.0% | |
| GCAGCATGTAAAATGCCAAA+GGG | - | Chr1:17467748-17467767 | MsG0180001213.01.T01:CDS | 40.0% | |
| GCGAAATTAGATGTGTTAGG+CGG | - | Chr1:17465358-17465377 | MsG0180001213.01.T01:three_prime_UTR | 40.0% | |
| GCTTAACTTATAGTTGGGCA+TGG | - | Chr1:17465916-17465935 | MsG0180001213.01.T01:CDS | 40.0% | |
| GGCAAAATGATTGGAACTTG+TGG | - | Chr1:17465242-17465261 | MsG0180001213.01.T01:three_prime_UTR | 40.0% | |
| GGCTCAATTAAATCCCTCAT+CGG | + | Chr1:17465487-17465506 | None:intergenic | 40.0% | |
| GTAAATGGATCTTCTTCCCA+GGG | + | Chr1:17466878-17466897 | None:intergenic | 40.0% | |
| GTTAGTGCTTCATACTGCTT+GGG | + | Chr1:17466016-17466035 | None:intergenic | 40.0% | |
| TATAGTTTGGTACACCGATG+AGG | - | Chr1:17465470-17465489 | MsG0180001213.01.T01:CDS | 40.0% | |
| TGCAGCATGTAAAATGCCAA+AGG | - | Chr1:17467747-17467766 | MsG0180001213.01.T01:CDS | 40.0% | |
| TGTTAGTGCTTCATACTGCT+TGG | + | Chr1:17466017-17466036 | None:intergenic | 40.0% | |
| TTTCATAACTTCCTCGGTCA+TGG | + | Chr1:17466900-17466919 | None:intergenic | 40.0% | |
| ! | AAAAGCACAACTAGGGCATT+TGG | - | Chr1:17468043-17468062 | MsG0180001213.01.T01:intron | 40.0% |
| ! | AAGAAACAGGTTGAGTTCGT+TGG | - | Chr1:17467861-17467880 | MsG0180001213.01.T01:intron | 40.0% |
| ! | CATGATATCTGGAATGAAGG+GGG | - | Chr1:17466536-17466555 | MsG0180001213.01.T01:CDS | 40.0% |
| !! | TGATGTATTAGGGTGTCGAT+GGG | - | Chr1:17465981-17466000 | MsG0180001213.01.T01:CDS | 40.0% |
| !!! | GGGGTTTATTTTGTGAACTG+AGG | - | Chr1:17465263-17465282 | MsG0180001213.01.T01:three_prime_UTR | 40.0% |
| ACATGAATAGGGGATGAGAG+GGG | + | Chr1:17467572-17467591 | None:intergenic | 45.0% | |
| ACTTCCTCGGTCATGGTAAA+TGG | + | Chr1:17466893-17466912 | None:intergenic | 45.0% | |
| AGATCCATTTACCATGACCG+AGG | - | Chr1:17466886-17466905 | MsG0180001213.01.T01:CDS | 45.0% | |
| AGGCCAACTCAAGATTCTTG+TGG | - | Chr1:17467173-17467192 | MsG0180001213.01.T01:intron | 45.0% | |
| AGTTGCGAGATGGTTCTCTT+AGG | - | Chr1:17467121-17467140 | MsG0180001213.01.T01:intron | 45.0% | |
| AGTTGTGCGTGAAAGGTTGT+TGG | - | Chr1:17466934-17466953 | MsG0180001213.01.T01:CDS | 45.0% | |
| ATGCTGCATAACATGGTGTG+TGG | + | Chr1:17467735-17467754 | None:intergenic | 45.0% | |
| CAAAACCTTGCCTGAGAACA+GGG | - | Chr1:17467811-17467830 | MsG0180001213.01.T01:intron | 45.0% | |
| CGTCTATAGCCATCTTTGCT+TGG | + | Chr1:17465751-17465770 | None:intergenic | 45.0% | |
| CTATTTGATTGCCGGAGTCT+AGG | - | Chr1:17467917-17467936 | MsG0180001213.01.T01:intron | 45.0% | |
| GAAGATATCAAAACGTCGCG+CGG | + | Chr1:17465158-17465177 | None:intergenic | 45.0% | |
| GCCAACTCAAGATTCTTGTG+GGG | - | Chr1:17467175-17467194 | MsG0180001213.01.T01:intron | 45.0% | |
| GCGGCGAAATTAGATGTGTT+AGG | - | Chr1:17465355-17465374 | MsG0180001213.01.T01:three_prime_UTR | 45.0% | |
| GGAAGCTTCGATGACTTCAA+AGG | + | Chr1:17467792-17467811 | None:intergenic | 45.0% | |
| GGCCAACTCAAGATTCTTGT+GGG | - | Chr1:17467174-17467193 | MsG0180001213.01.T01:intron | 45.0% | |
| GGTAAATGGATCTTCTTCCC+AGG | + | Chr1:17466879-17466898 | None:intergenic | 45.0% | |
| GTGTAATTCACACACCCCTT+TGG | + | Chr1:17467766-17467785 | None:intergenic | 45.0% | |
| GTTGTTGGACCATGTACATC+AGG | - | Chr1:17466949-17466968 | MsG0180001213.01.T01:CDS | 45.0% | |
| TCCCCACAAGAATCTTGAGT+TGG | + | Chr1:17467179-17467198 | None:intergenic | 45.0% | |
| TCTATGATGACCCTGTTCTC+AGG | + | Chr1:17467824-17467843 | None:intergenic | 45.0% | |
| TCTGCAACATGTCGAACATG+TGG | + | Chr1:17466058-17466077 | None:intergenic | 45.0% | |
| TGATCAAGCGAATGGGAGAA+CGG | - | Chr1:17466266-17466285 | MsG0180001213.01.T01:intron | 45.0% | |
| ! | AGAGTAGGTGGATTCTAAGG+TGG | + | Chr1:17465511-17465530 | None:intergenic | 45.0% |
| ! | CTTGGAGTGTCCAAGATAAC+AGG | + | Chr1:17466806-17466825 | None:intergenic | 45.0% |
| ! | GGAAGCGTGGCTCAAAAATT+GGG | - | Chr1:17467196-17467215 | MsG0180001213.01.T01:intron | 45.0% |
| ! | GTCAGAGTAGGTGGATTCTA+AGG | + | Chr1:17465514-17465533 | None:intergenic | 45.0% |
| ! | TGGTTGTGCCCATTTTCCAT+AGG | - | Chr1:17467367-17467386 | MsG0180001213.01.T01:intron | 45.0% |
| !! | AGTAGGTGGATTCTAAGGTG+GGG | + | Chr1:17465509-17465528 | None:intergenic | 45.0% |
| !! | GAGTAGGTGGATTCTAAGGT+GGG | + | Chr1:17465510-17465529 | None:intergenic | 45.0% |
| !! | GCAAGTGCATCTAGTTCTTC+AGG | - | Chr1:17467651-17467670 | MsG0180001213.01.T01:intron | 45.0% |
| !! | GTGATGTATTAGGGTGTCGA+TGG | - | Chr1:17465980-17465999 | MsG0180001213.01.T01:CDS | 45.0% |
| AAGATTCTTGTGGGGAAGCG+TGG | - | Chr1:17467183-17467202 | MsG0180001213.01.T01:intron | 50.0% | |
| ACAACGACGTGCCAGAACAA+CGG | + | Chr1:17465332-17465351 | None:intergenic | 50.0% | |
| ATGGCTATAGACGTGTTGCG+TGG | - | Chr1:17465758-17465777 | MsG0180001213.01.T01:intron | 50.0% | |
| CATGAATAGGGGATGAGAGG+GGG | + | Chr1:17467571-17467590 | None:intergenic | 50.0% | |
| CCAAAACCTTGCCTGAGAAC+AGG | - | Chr1:17467810-17467829 | MsG0180001213.01.T01:intron | 50.0% | |
| GACTCAGTTCTTGATGGAGC+AGG | - | Chr1:17466575-17466594 | MsG0180001213.01.T01:intron | 50.0% | |
| GACTGGAAAGAGTTGCGAGA+TGG | - | Chr1:17467111-17467130 | MsG0180001213.01.T01:intron | 50.0% | |
| GTTAGGCGGAGAGAAAGAAC+TGG | - | Chr1:17465372-17465391 | MsG0180001213.01.T01:three_prime_UTR | 50.0% | |
| ! | ATATCTGGAATGAAGGGGGC+TGG | - | Chr1:17466540-17466559 | MsG0180001213.01.T01:CDS | 50.0% |
| ! | CCTGTTCTCAGGCAAGGTTT+TGG | + | Chr1:17467813-17467832 | None:intergenic | 50.0% |
| ! | GGGAAGCGTGGCTCAAAAAT+TGG | - | Chr1:17467195-17467214 | MsG0180001213.01.T01:intron | 50.0% |
| !! | GTAGGTGGATTCTAAGGTGG+GGG | + | Chr1:17465508-17465527 | None:intergenic | 50.0% |
| !! | TTAGGGTGTCGATGGGTCAT+TGG | - | Chr1:17465988-17466007 | MsG0180001213.01.T01:CDS | 50.0% |
| AATAGGCAGTAGAACGGCCC+TGG | - | Chr1:17466858-17466877 | MsG0180001213.01.T01:CDS | 55.0% | |
| ATAGGCAGTAGAACGGCCCT+GGG | - | Chr1:17466859-17466878 | MsG0180001213.01.T01:CDS | 55.0% | |
| GATGACCCTGTTCTCAGGCA+AGG | + | Chr1:17467819-17467838 | None:intergenic | 55.0% | |
| !! | GTTCGTTGGTGATCTCACGC+CGG | - | Chr1:17467875-17467894 | MsG0180001213.01.T01:intron | 55.0% |
| ACGTGCCAGAACAACGGCTC+TGG | + | Chr1:17465326-17465345 | None:intergenic | 60.0% | |
| CGTGCCAGAACAACGGCTCT+GGG | + | Chr1:17465325-17465344 | None:intergenic | 60.0% | |
| GAATAGGGGATGAGAGGGGG+AGG | + | Chr1:17467568-17467587 | None:intergenic | 60.0% | |
| TCTGGCACGTCGTTGTGCTG+CGG | - | Chr1:17465336-17465355 | MsG0180001213.01.T01:three_prime_UTR | 60.0% | |
| GGAGCCCAGAGCCGTTGTTC+TGG | - | Chr1:17465318-17465337 | MsG0180001213.01.T01:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 17464980 | 17468133 | 17464980 | ID=MsG0180001213.01;Name=MsG0180001213.01 |
| Chr1 | mRNA | 17464980 | 17468133 | 17464980 | ID=MsG0180001213.01.T01;Parent=MsG0180001213.01;Name=MsG0180001213.01.T01;_AED=0.41;_eAED=0.56;_QI=0|0.5|0.42|1|0.66|0.28|7|446|332 |
| Chr1 | exon | 17464980 | 17465510 | 17464980 | ID=MsG0180001213.01.T01:exon:6035;Parent=MsG0180001213.01.T01 |
| Chr1 | exon | 17465896 | 17466035 | 17465896 | ID=MsG0180001213.01.T01:exon:6034;Parent=MsG0180001213.01.T01 |
| Chr1 | exon | 17466143 | 17466250 | 17466143 | ID=MsG0180001213.01.T01:exon:6033;Parent=MsG0180001213.01.T01 |
| Chr1 | exon | 17466463 | 17466583 | 17466463 | ID=MsG0180001213.01.T01:exon:6032;Parent=MsG0180001213.01.T01 |
| Chr1 | exon | 17466712 | 17467121 | 17466712 | ID=MsG0180001213.01.T01:exon:6031;Parent=MsG0180001213.01.T01 |
| Chr1 | exon | 17467696 | 17467802 | 17467696 | ID=MsG0180001213.01.T01:exon:6030;Parent=MsG0180001213.01.T01 |
| Chr1 | exon | 17468106 | 17468133 | 17468106 | ID=MsG0180001213.01.T01:exon:6029;Parent=MsG0180001213.01.T01 |
| Chr1 | CDS | 17468106 | 17468133 | 17468106 | ID=MsG0180001213.01.T01:cds;Parent=MsG0180001213.01.T01 |
| Chr1 | CDS | 17467696 | 17467802 | 17467696 | ID=MsG0180001213.01.T01:cds;Parent=MsG0180001213.01.T01 |
| Chr1 | CDS | 17466712 | 17467121 | 17466712 | ID=MsG0180001213.01.T01:cds;Parent=MsG0180001213.01.T01 |
| Chr1 | CDS | 17466463 | 17466583 | 17466463 | ID=MsG0180001213.01.T01:cds;Parent=MsG0180001213.01.T01 |
| Chr1 | CDS | 17466143 | 17466250 | 17466143 | ID=MsG0180001213.01.T01:cds;Parent=MsG0180001213.01.T01 |
| Chr1 | CDS | 17465896 | 17466035 | 17465896 | ID=MsG0180001213.01.T01:cds;Parent=MsG0180001213.01.T01 |
| Chr1 | CDS | 17465426 | 17465510 | 17465426 | ID=MsG0180001213.01.T01:cds;Parent=MsG0180001213.01.T01 |
| Chr1 | three_prime_UTR | 17464980 | 17465425 | 17464980 | ID=MsG0180001213.01.T01:three_prime_utr;Parent=MsG0180001213.01.T01 |
| Gene Sequence |
| Protein sequence |
