AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037512.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037512.01.T01 MTR_7g033700 91.057 369 14 3 1 350 1 369 0.0 625
MsG0780037512.01.T01 MTR_8g063090 81.440 361 43 6 1 343 1 355 1.38e-176 494
MsG0780037512.01.T01 MTR_7g033685 53.165 395 128 11 1 350 12 394 5.22e-113 334
MsG0780037512.01.T01 MTR_7g033685 51.345 409 128 12 1 350 78 474 3.24e-108 325
MsG0780037512.01.T01 MTR_7g033685 67.606 142 44 1 118 257 6 147 2.78e-58 190
MsG0780037512.01.T01 MTR_7g033685 66.667 144 44 2 118 257 6 149 2.88e-56 185
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037512.01.T01 AT2G30280 51.111 270 105 8 16 265 16 278 3.88e-75 236

Find 64 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTATCCGGACGAGATTT+CGG 0.287103 7:+27288611 MsG0780037512.01.T01:CDS
TTGCAACAACAAACCTTGTT+TGG 0.308019 7:-27287986 None:intergenic
ATAAGCTCAGGACAAGTTAT+AGG 0.318302 7:-27282287 None:intergenic
CAACGAAGCCTGTTGTCGTT+AGG 0.338286 7:+27282374 MsG0780037512.01.T01:CDS
AATTCATAACAAGAAGGTTT+TGG 0.339164 7:+27284042 MsG0780037512.01.T01:CDS
TCAAAATCCTCATCATATAA+TGG 0.354098 7:-27288771 None:intergenic
GAAGAACTTTCAGCCATGTT+AGG 0.369066 7:-27282328 None:intergenic
TTCGTCTCCGGCTCCAGTTC+CGG 0.373806 7:+27282348 MsG0780037512.01.T01:CDS
GGCTTCGTTGGAGCCGGAAC+TGG 0.381736 7:-27282361 None:intergenic
CGTTTAACCCTAACGACAAC+AGG 0.384660 7:-27282382 None:intergenic
AGATATTGTGCAATCATTTG+TGG 0.399760 7:+27284105 MsG0780037512.01.T01:CDS
TTCAATCTCTGCAGCAGCAT+TGG 0.417219 7:-27287944 None:intergenic
TCAATCTCTGCAGCAGCATT+GGG 0.421354 7:-27287943 None:intergenic
AACGAAGCCTGTTGTCGTTA+GGG 0.432354 7:+27282375 MsG0780037512.01.T01:CDS
GGCTGAAAGTTCTTCGTCTC+CGG 0.432832 7:+27282336 MsG0780037512.01.T01:CDS
CAATCCAATGAATGATTATC+CGG 0.444230 7:+27288599 MsG0780037512.01.T01:CDS
TACTCACAGTGCATAAGAAT+GGG 0.465170 7:-27288348 None:intergenic
CACGAACAATGTCATAGAAC+TGG 0.474581 7:-27286151 None:intergenic
GGAATAACCTCTCTTAGTAA+AGG 0.474983 7:-27287922 None:intergenic
GAATAACCTCTCTTAGTAAA+GGG 0.479090 7:-27287921 None:intergenic
TCAGAAGCACTTCTAGAAGC+AGG 0.480631 7:-27284361 None:intergenic
TCGTCCGGATAATCATTCAT+TGG 0.491166 7:-27288603 None:intergenic
CAGAGTTCAAGTTGAAGAAG+AGG 0.491320 7:+27288437 MsG0780037512.01.T01:intron
ATACTCACAGTGCATAAGAA+TGG 0.494786 7:-27288349 None:intergenic
TATGAAACTGATGACTCAAA+TGG 0.496897 7:+27288489 MsG0780037512.01.T01:CDS
TCATCTTCCGAAATCTCGTC+CGG 0.506670 7:-27288618 None:intergenic
GTTGGAGCCGGAACTGGAGC+CGG 0.522792 7:-27282355 None:intergenic
AGTTGAAATTCATAACAAGA+AGG 0.523129 7:+27284036 MsG0780037512.01.T01:intron
AAGCTTGGAGGTGGTCATAC+CGG 0.525415 7:+27288853 MsG0780037512.01.T01:CDS
AGGATGTAGGTAATGAAGCT+TGG 0.525748 7:+27288838 MsG0780037512.01.T01:CDS
ATTAGAGTGCAAATAAGCTC+AGG 0.531811 7:-27282299 None:intergenic
GAGATTTCGGAAGATGAAGA+AGG 0.532402 7:+27288624 MsG0780037512.01.T01:CDS
GATTATGAAGGTCAAGGTGC+AGG 0.541394 7:+27288795 MsG0780037512.01.T01:CDS
ATGCAGAGATATGTCCTTGG+AGG 0.542700 7:+27287873 MsG0780037512.01.T01:intron
TTTGATGATTATGAAGGTCA+AGG 0.543637 7:+27288789 MsG0780037512.01.T01:CDS
TTACCTCCCTTTACTAAGAG+AGG 0.547553 7:+27287915 MsG0780037512.01.T01:CDS
ACAACAGGCTTCGTTGGAGC+CGG 0.548461 7:-27282367 None:intergenic
CTAACGACAACAGGCTTCGT+TGG 0.552390 7:-27282373 None:intergenic
GTCAGATGATGACGAGGATG+TGG 0.561072 7:+27288698 MsG0780037512.01.T01:CDS
GGATGAGACGATCGTTGAAG+AGG 0.564991 7:+27288319 MsG0780037512.01.T01:CDS
AGCATCGAGTGGAGAATGAG+AGG 0.565331 7:-27282410 None:intergenic
TGAATCTAAGTCAAAAGTTG+AGG 0.570958 7:+27284381 MsG0780037512.01.T01:CDS
TTTCATAATCTGAATTGTCA+AGG 0.573077 7:-27288473 None:intergenic
TAGGTAATGAAGCTTGGAGG+TGG 0.580122 7:+27288844 MsG0780037512.01.T01:CDS
CAAAAGTCTTTGATCCTCCA+AGG 0.586157 7:-27287887 None:intergenic
CTAAGTCAAAAGTTGAGGAA+AGG 0.586596 7:+27284386 MsG0780037512.01.T01:CDS
ATGTAGGTAATGAAGCTTGG+AGG 0.590833 7:+27288841 MsG0780037512.01.T01:CDS
TTATGACCTCTACACTGTAA+CGG 0.604149 7:+27288298 MsG0780037512.01.T01:CDS
ATAAGTGCTCACTCCAAACA+AGG 0.605515 7:+27287973 MsG0780037512.01.T01:CDS
TAAAGGTGTTACTTCTGATG+TGG 0.617831 7:+27288743 MsG0780037512.01.T01:CDS
GAAGAGCAGAAAAGTAAACA+AGG 0.626979 7:+27286094 MsG0780037512.01.T01:CDS
GCATCGAGTGGAGAATGAGA+GGG 0.632883 7:-27282409 None:intergenic
TAACCTCTCTTAGTAAAGGG+AGG 0.634661 7:-27287918 None:intergenic
TCTCATCCGTTACAGTGTAG+AGG 0.640074 7:-27288304 None:intergenic
AATGATGATGACGAGGATGT+AGG 0.648994 7:+27288825 MsG0780037512.01.T01:CDS
TTAATGCAGAGATATGTCCT+TGG 0.657090 7:+27287870 MsG0780037512.01.T01:intron
AGAGCAGAAAAGTAAACAAG+GGG 0.667224 7:+27286096 MsG0780037512.01.T01:CDS
AGAATTGTCAGATGATGACG+AGG 0.671720 7:+27288692 MsG0780037512.01.T01:CDS
CGATGACAATGATGATGACG+AGG 0.673713 7:+27288818 MsG0780037512.01.T01:CDS
AAGAGCAGAAAAGTAAACAA+GGG 0.682340 7:+27286095 MsG0780037512.01.T01:CDS
GGATGATCCATTATATGATG+AGG 0.683635 7:+27288764 MsG0780037512.01.T01:CDS
ATGTTACAGAAAGCATCGAG+TGG 0.688180 7:-27282421 None:intergenic
GGAGACAATAAGCAGCTCTG+AGG 0.706807 7:+27284075 MsG0780037512.01.T01:CDS
TCAGAAGAAAGCAAGCACAG+CGG 0.775243 7:+27288660 MsG0780037512.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - Chr7:27287065-27287046 None:intergenic 0.0%
!! ATTATGAAGAATTTAATTAT+AGG + Chr7:27282931-27282950 MsG0780037512.01.T01:intron 10.0%
!! TTATGAAGAATTTAATTATA+GGG + Chr7:27282932-27282951 MsG0780037512.01.T01:intron 10.0%
!!! TTTTTAGTTTTAGTTAAAAA+AGG + Chr7:27285451-27285470 MsG0780037512.01.T01:intron 10.0%
!! ATAAATAAAAGAAATACACA+AGG - Chr7:27284684-27284703 None:intergenic 15.0%
!! ATTATAATAATCACTGAAAT+TGG - Chr7:27283051-27283070 None:intergenic 15.0%
!! TAAATAAAAGAAATACACAA+GGG - Chr7:27284683-27284702 None:intergenic 15.0%
!! TATAATAATAATAACAAGCA+TGG - Chr7:27285731-27285750 None:intergenic 15.0%
!! TATGAAGAATTTAATTATAG+GGG + Chr7:27282933-27282952 MsG0780037512.01.T01:intron 15.0%
!! TTATAGATCCAAAAAAAATT+AGG + Chr7:27286417-27286436 MsG0780037512.01.T01:intron 15.0%
!! TTATTAAAAGTCTTTCTTAA+AGG + Chr7:27284726-27284745 MsG0780037512.01.T01:intron 15.0%
!!! AAAATATATTTGAGTTATGT+TGG + Chr7:27288093-27288112 MsG0780037512.01.T01:intron 15.0%
!!! AAATATATTTGAGTTATGTT+GGG + Chr7:27288094-27288113 MsG0780037512.01.T01:intron 15.0%
!!! AATTTTTTTTGGATCTATAA+GGG - Chr7:27286417-27286436 None:intergenic 15.0%
!!! TAATTTTTTTTGGATCTATA+AGG - Chr7:27286418-27286437 None:intergenic 15.0%
!! AACAATTAAAATTGCATCTA+TGG + Chr7:27285190-27285209 MsG0780037512.01.T01:intron 20.0%
!! AATTAAATGAGATGAAAACT+TGG - Chr7:27285820-27285839 None:intergenic 20.0%
!! AGAAGAATAACTAAAAAAGT+TGG + Chr7:27285423-27285442 MsG0780037512.01.T01:intron 20.0%
!! ATATCTTCAATAAATAAGGA+AGG - Chr7:27287751-27287732 None:intergenic 20.0%
!! CTAAATTGTTTATATTTCCA+TGG + Chr7:27288235-27288254 MsG0780037512.01.T01:intron 20.0%
!! GAACATATCTTCAATAAATA+AGG - Chr7:27286335-27286354 None:intergenic 20.0%
!! GATCTAGATTCAAAAAAATT+AGG - Chr7:27287596-27287615 None:intergenic 20.0%
!! GCAAATATCTTCAATAAATA+AGG + Chr7:27287728-27287747 MsG0780037512.01.T01:intron 20.0%
!! TGAAAAATTGTATGTCTAAA+TGG - Chr7:27285624-27285643 None:intergenic 20.0%
!! TGTATATAAGTATCATTCTT+CGG + Chr7:27286466-27286485 MsG0780037512.01.T01:intron 20.0%
!! TTATGAATTTCAACTGAAAA+AGG - Chr7:27284031-27284050 None:intergenic 20.0%
!! TTCAGTGATTATTATAATGA+TGG + Chr7:27283053-27283072 MsG0780037512.01.T01:intron 20.0%
!! TTGTCTATACTTGTTTAATA+TGG + Chr7:27288373-27288392 MsG0780037512.01.T01:intron 20.0%
!!! AATATATTTGAGTTATGTTG+GGG + Chr7:27288095-27288114 MsG0780037512.01.T01:intron 20.0%
!!! AATTGTTTTTGAAAAGAACT+TGG - Chr7:27285177-27285196 None:intergenic 20.0%
!!! AGTACTTTAATTTGATATCA+AGG - Chr7:27285088-27285107 None:intergenic 20.0%
!!! ATAAATCTTACCTTTCTTTT+TGG + Chr7:27283581-27283600 MsG0780037512.01.T01:intron 20.0%
!!! ATTAAAGTACTCAAATGTAT+AGG + Chr7:27285097-27285116 MsG0780037512.01.T01:intron 20.0%
!!! TAATCTTTTTTCTTTTTGAC+AGG - Chr7:27285680-27285699 None:intergenic 20.0%
!!! TATCTTGACCTAATTTTTTT+TGG - Chr7:27286428-27286447 None:intergenic 20.0%
!!! TTAGTTTTAGTTAAAAAAGG+AGG + Chr7:27285454-27285473 MsG0780037512.01.T01:intron 20.0%
! AAAGAAAGGTAAGATTTATC+AGG - Chr7:27283580-27283599 None:intergenic 25.0%
! AAATTTCCGAAATCGAAAAA+AGG - Chr7:27282568-27282587 None:intergenic 25.0%
! AAGAAAGGTAAGATTTATCA+GGG - Chr7:27283579-27283598 None:intergenic 25.0%
! AATAAAATAAGTGCAACTTG+AGG - Chr7:27288048-27288067 None:intergenic 25.0%
! AATTTCAACTGAAAAAGGAA+GGG - Chr7:27284026-27284045 None:intergenic 25.0%
! ACAAAAATAACCCCAATAAA+AGG - Chr7:27282895-27282914 None:intergenic 25.0%
! ACAGCTAAAAAAACAAAAAC+AGG - Chr7:27284926-27284945 None:intergenic 25.0%
! ACTATTATATGTTAGTATCG+TGG + Chr7:27282732-27282751 MsG0780037512.01.T01:intron 25.0%
! AGAATGATACTTATATACAG+AGG - Chr7:27286465-27286484 None:intergenic 25.0%
! AGACAATATAGATACTTTGA+CGG + Chr7:27283492-27283511 MsG0780037512.01.T01:intron 25.0%
! AGAGTGATGAAAAAAAAGAA+AGG - Chr7:27282453-27282472 None:intergenic 25.0%
! AGTTGAAATTCATAACAAGA+AGG + Chr7:27284036-27284055 MsG0780037512.01.T01:intron 25.0%
! ATGAACAATCCAAAATTACA+GGG - Chr7:27282865-27282884 None:intergenic 25.0%
! CTATCTGAACTTAACAATAA+CGG - Chr7:27283319-27283338 None:intergenic 25.0%
! GTGAAACGAAATGTTATAAA+TGG - Chr7:27284242-27284261 None:intergenic 25.0%
! GTTTGTATACAAGAGAATAT+AGG - Chr7:27288189-27288208 None:intergenic 25.0%
! TAAAGCTAAACAAGAAAAAG+AGG + Chr7:27284646-27284665 MsG0780037512.01.T01:intron 25.0%
! TAAATTACAGTTATGATTCC+CGG - Chr7:27283358-27283377 None:intergenic 25.0%
! TAAGGTGAAAGTAGTATAAA+GGG - Chr7:27284851-27284870 None:intergenic 25.0%
! TCAAAAATAGGAAATGATGA+AGG - Chr7:27284597-27284616 None:intergenic 25.0%
! TCAAAATCCTCATCATATAA+TGG - Chr7:27288774-27288793 None:intergenic 25.0%
! TCAATAGTGATCTACATTAA+GGG - Chr7:27288541-27288560 None:intergenic 25.0%
! TCTACCATATCTCAAAATTA+TGG - Chr7:27283686-27283705 None:intergenic 25.0%
! TCTCATTCTTATTCTAATTC+TGG + Chr7:27282490-27282509 MsG0780037512.01.T01:intron 25.0%
! TCTTCAGAAATGTTAATGTA+AGG + Chr7:27284416-27284435 MsG0780037512.01.T01:intron 25.0%
! TGTTGCTATATAAATAAGGA+GGG + Chr7:27287808-27287827 MsG0780037512.01.T01:intron 25.0%
! TTATTGTTAAGTTCAGATAG+AGG + Chr7:27283319-27283338 MsG0780037512.01.T01:intron 25.0%
! TTGACAATAAGATACATTCA+TGG - Chr7:27284532-27284551 None:intergenic 25.0%
! TTTCATAATCTGAATTGTCA+AGG - Chr7:27288476-27288495 None:intergenic 25.0%
!! AAATATTTTCTGGGTCAATA+AGG + Chr7:27288069-27288088 MsG0780037512.01.T01:intron 25.0%
!! AATATTTGTTACACACACAA+AGG + Chr7:27287552-27287571 MsG0780037512.01.T01:intron 25.0%
!! AATTCATAACAAGAAGGTTT+TGG + Chr7:27284042-27284061 MsG0780037512.01.T01:CDS 25.0%
!! ACTTGTTCTAATGTTGTTTA+TGG + Chr7:27286780-27286799 MsG0780037512.01.T01:intron 25.0%
!! ATATATTTGAGTTATGTTGG+GGG + Chr7:27288096-27288115 MsG0780037512.01.T01:intron 25.0%
!! ATCTTTTGCATCTCAATTTA+GGG + Chr7:27282625-27282644 MsG0780037512.01.T01:intron 25.0%
!! ATTGATAACAAAAGTGAGTT+TGG + Chr7:27286747-27286766 MsG0780037512.01.T01:intron 25.0%
!! CAAAACTGCTATTTGTAAAA+TGG - Chr7:27285365-27285384 None:intergenic 25.0%
!! GAAAGTCATTGTCTTTTAAT+AGG - Chr7:27283624-27283643 None:intergenic 25.0%
!! GAAATTGGTAATAACTAGAT+GGG - Chr7:27283036-27283055 None:intergenic 25.0%
!! TATCTTTTGCATCTCAATTT+AGG + Chr7:27282624-27282643 MsG0780037512.01.T01:intron 25.0%
!! TGAAATTGGTAATAACTAGA+TGG - Chr7:27283037-27283056 None:intergenic 25.0%
!! TTTTATTAGCCCAAATTACA+GGG - Chr7:27282832-27282851 None:intergenic 25.0%
!! TTTTTATTAGCCCAAATTAC+AGG - Chr7:27282833-27282852 None:intergenic 25.0%
!!! AACATTTTTTGAGATCAAAC+AGG - Chr7:27285298-27285317 None:intergenic 25.0%
!!! GAATCCATAATTTTGAGATA+TGG + Chr7:27283679-27283698 MsG0780037512.01.T01:intron 25.0%
!!! GATTTGATTGACTGTTTTTA+AGG + Chr7:27284336-27284355 MsG0780037512.01.T01:intron 25.0%
!!! TCATGAATTAGCCTTTTATT+GGG + Chr7:27282881-27282900 MsG0780037512.01.T01:intron 25.0%
!!! TCTGATTTTGATTCTTTCAA+TGG - Chr7:27287290-27287309 None:intergenic 25.0%
!!! TGTTTATTTTATATCGCACT+CGG + Chr7:27285522-27285541 MsG0780037512.01.T01:intron 25.0%
!!! TTATTTTTGTAACAGGGTAA+AGG + Chr7:27282905-27282924 MsG0780037512.01.T01:intron 25.0%
!!! TTCATGAATTAGCCTTTTAT+TGG + Chr7:27282880-27282899 MsG0780037512.01.T01:intron 25.0%
!!! TTTTAGAATAACGATTATGC+TGG - Chr7:27283147-27283166 None:intergenic 25.0%
AAACTAGAGTTCCAAATTCA+TGG - Chr7:27286827-27286846 None:intergenic 30.0%
AACAACAATAGCACTATTGT+CGG - Chr7:27287317-27287336 None:intergenic 30.0%
AACAATAACACTGTTGTTGA+TGG + Chr7:27286705-27286724 MsG0780037512.01.T01:intron 30.0%
AACAGTCAATCAAATCAACA+AGG - Chr7:27284332-27284351 None:intergenic 30.0%
AAGAGCAGAAAAGTAAACAA+GGG + Chr7:27286095-27286114 MsG0780037512.01.T01:CDS 30.0%
AAGTAATCCACCAAAAAGAA+AGG - Chr7:27283594-27283613 None:intergenic 30.0%
AAGTTCTCTCAAAGATTGTT+TGG + Chr7:27286213-27286232 MsG0780037512.01.T01:intron 30.0%
AATATCCACTAATCTTTACG+AGG + Chr7:27283185-27283204 MsG0780037512.01.T01:intron 30.0%
ACTACAACACAATCTCTAAT+AGG - Chr7:27284778-27284797 None:intergenic 30.0%
AGAAAGGTAAGATTTATCAG+GGG - Chr7:27283578-27283597 None:intergenic 30.0%
AGAGCACATTAAAATGAGAT+GGG - Chr7:27284219-27284238 None:intergenic 30.0%
AGATATTGTGCAATCATTTG+TGG + Chr7:27284105-27284124 MsG0780037512.01.T01:CDS 30.0%
ATATTGATAGATGCATGCAA+AGG - Chr7:27286907-27286926 None:intergenic 30.0%
ATATTGATATAGGCATGCAA+AGG + Chr7:27287098-27287117 MsG0780037512.01.T01:intron 30.0%
ATCACTTATACTGATATCCA+TGG + Chr7:27283400-27283419 MsG0780037512.01.T01:intron 30.0%
ATCATTCATTGGATTGTCTT+CGG - Chr7:27288595-27288614 None:intergenic 30.0%
CAATCCAATGAATGATTATC+CGG + Chr7:27288599-27288618 MsG0780037512.01.T01:CDS 30.0%
CACCTGTTGCTATATAAATA+AGG + Chr7:27287804-27287823 MsG0780037512.01.T01:intron 30.0%
CATGAACAATCCAAAATTAC+AGG - Chr7:27282866-27282885 None:intergenic 30.0%
CCAAATTCATGGTGATTATT+AGG - Chr7:27286816-27286835 None:intergenic 30.0%
CCTAATAATCACCATGAATT+TGG + Chr7:27286813-27286832 MsG0780037512.01.T01:intron 30.0%
CTCAAATAGCATCTGTAATT+CGG - Chr7:27283006-27283025 None:intergenic 30.0%
CTCTAATCAAAAACCTAACA+TGG + Chr7:27282315-27282334 MsG0780037512.01.T01:exon 30.0%
CTGTTGCTATATAAATAAGG+AGG + Chr7:27287807-27287826 MsG0780037512.01.T01:intron 30.0%
GAATAACCTCTCTTAGTAAA+GGG - Chr7:27287924-27287943 None:intergenic 30.0%
GAATTTCAACTGAAAAAGGA+AGG - Chr7:27284027-27284046 None:intergenic 30.0%
GACAACAATCGTATATCATA+TGG - Chr7:27284169-27284188 None:intergenic 30.0%
GACAATGAAGAAGTTATTGT+TGG + Chr7:27287438-27287457 MsG0780037512.01.T01:intron 30.0%
GAGCAATTATATTGTGAAAC+AGG - Chr7:27284004-27284023 None:intergenic 30.0%
GCTAATAATCACTATGGATT+TGG - Chr7:27287208-27287227 None:intergenic 30.0%
GGTCTAGCAAGATTATTTAA+AGG - Chr7:27283910-27283929 None:intergenic 30.0%
GTAAGGTGAAAGTAGTATAA+AGG - Chr7:27284852-27284871 None:intergenic 30.0%
GTCAATAGTGATCTACATTA+AGG - Chr7:27288542-27288561 None:intergenic 30.0%
GTGACATACATTGAACTTTA+GGG + Chr7:27285769-27285788 MsG0780037512.01.T01:intron 30.0%
GTTGTGCATATCTCAATTTA+GGG + Chr7:27282512-27282531 MsG0780037512.01.T01:intron 30.0%
TAATGTAGATCACTATTGAC+TGG + Chr7:27288542-27288561 MsG0780037512.01.T01:intron 30.0%
TAGAATTGTGTATGATGCTA+TGG + Chr7:27284950-27284969 MsG0780037512.01.T01:intron 30.0%
TATGAAACTGATGACTCAAA+TGG + Chr7:27288489-27288508 MsG0780037512.01.T01:CDS 30.0%
TATTATAATGATGGCTGAAC+TGG + Chr7:27283062-27283081 MsG0780037512.01.T01:intron 30.0%
TCAAATAGCATCTGTAATTC+GGG - Chr7:27283005-27283024 None:intergenic 30.0%
TCAAGACGTTAACAAAAACA+AGG + Chr7:27283856-27283875 MsG0780037512.01.T01:intron 30.0%
TGAATCTAAGTCAAAAGTTG+AGG + Chr7:27284381-27284400 MsG0780037512.01.T01:CDS 30.0%
TGCAAAAGAAGAAAAAACAG+CGG - Chr7:27283967-27283986 None:intergenic 30.0%
TGTATCAATAATAACAAGCG+TGG - Chr7:27285553-27285572 None:intergenic 30.0%
TGTGACATACATTGAACTTT+AGG + Chr7:27285768-27285787 MsG0780037512.01.T01:intron 30.0%
TTAAATAGCCCCTGTAATTT+GGG + Chr7:27282820-27282839 MsG0780037512.01.T01:intron 30.0%
TTCACTTCATTTCATAGCAT+TGG - Chr7:27287036-27287017 None:intergenic 30.0%
TTGAGAAGAAGAAGAAGAAT+CGG - Chr7:27282599-27282618 None:intergenic 30.0%
TTGTTCTTCACAAACTTTGT+GGG + Chr7:27287502-27287521 MsG0780037512.01.T01:intron 30.0%
TTGTTTGGTATCTTTGTATG+TGG + Chr7:27286228-27286247 MsG0780037512.01.T01:intron 30.0%
TTTATGCATGCACATTTGTT+TGG + Chr7:27284699-27284718 MsG0780037512.01.T01:intron 30.0%
TTTATTAGCCCAAATTACAG+GGG - Chr7:27282831-27282850 None:intergenic 30.0%
TTTGTGGCTAATAATCACTA+TGG - Chr7:27287214-27287233 None:intergenic 30.0%
! AAAAACCATCCCTGTAATTT+TGG + Chr7:27282853-27282872 MsG0780037512.01.T01:intron 30.0%
! AATCTTACCTTTCTTTTTGG+TGG + Chr7:27283584-27283603 MsG0780037512.01.T01:intron 30.0%
! AGTGTCTAGAGTACATATAT+TGG - Chr7:27287467-27287486 None:intergenic 30.0%
! ATTTAAGGTATTAACCCTAG+TGG - Chr7:27282806-27282825 None:intergenic 30.0%
! CTCCTTATTTATATAGCAAC+AGG - Chr7:27287809-27287828 None:intergenic 30.0%
! CTCTGAAGAAAAAGTTAATG+AGG + Chr7:27286178-27286197 MsG0780037512.01.T01:CDS 30.0%
! GCATTCATTTTGTCTAAACA+TGG - Chr7:27284302-27284321 None:intergenic 30.0%
! GTTCTAATGTTGTTTATGGT+TGG + Chr7:27286784-27286803 MsG0780037512.01.T01:intron 30.0%
! TCTAGACACTTCAATCATTT+TGG + Chr7:27287477-27287496 MsG0780037512.01.T01:intron 30.0%
! TTTGATGATTATGAAGGTCA+AGG + Chr7:27288789-27288808 MsG0780037512.01.T01:CDS 30.0%
!! AACAATGTTCCTTTGAGATA+TGG + Chr7:27286616-27286635 MsG0780037512.01.T01:intron 30.0%
!! ACAATGTTCCTTTGAGATAT+GGG + Chr7:27286617-27286636 MsG0780037512.01.T01:intron 30.0%
!! GAGGATTTTGATGATTATGA+AGG + Chr7:27288783-27288802 MsG0780037512.01.T01:CDS 30.0%
!! TCTCAATTTAGGGTTTTTGA+TGG + Chr7:27282635-27282654 MsG0780037512.01.T01:intron 30.0%
!!! AGCAGTTTTGAAAACTAGTT+TGG + Chr7:27285375-27285394 MsG0780037512.01.T01:intron 30.0%
!!! ATTGGGGTTATTTTTGTAAC+AGG + Chr7:27282898-27282917 MsG0780037512.01.T01:intron 30.0%
!!! CATGAATTAGCCTTTTATTG+GGG + Chr7:27282882-27282901 MsG0780037512.01.T01:intron 30.0%
!!! GAAGAAGAGGATTATTTTGA+TGG + Chr7:27288450-27288469 MsG0780037512.01.T01:CDS 30.0%
!!! GCAGTTTTGAAAACTAGTTT+GGG + Chr7:27285376-27285395 MsG0780037512.01.T01:intron 30.0%
!!! GTTTATTTTATATCGCACTC+GGG + Chr7:27285523-27285542 MsG0780037512.01.T01:intron 30.0%
!!! TCTTCATTGTCACTTTTGTA+GGG - Chr7:27287429-27287448 None:intergenic 30.0%
!!! TTCTTCATTGTCACTTTTGT+AGG - Chr7:27287430-27287449 None:intergenic 30.0%
!!! TTGGGGTTATTTTTGTAACA+GGG + Chr7:27282899-27282918 MsG0780037512.01.T01:intron 30.0%
ACAAGTAAACAAAGCATGCA+AGG - Chr7:27284826-27284845 None:intergenic 35.0%
ACAATCCAAAATTACAGGGA+TGG - Chr7:27282861-27282880 None:intergenic 35.0%
ACAATGACTTTCTGAGTACT+CGG + Chr7:27283632-27283651 MsG0780037512.01.T01:intron 35.0%
AGAGCAGAAAAGTAAACAAG+GGG + Chr7:27286096-27286115 MsG0780037512.01.T01:CDS 35.0%
ATAAGCTCAGGACAAGTTAT+AGG - Chr7:27282290-27282309 None:intergenic 35.0%
ATAAGTGCAACTTGAGGAAA+AGG - Chr7:27288042-27288061 None:intergenic 35.0%
ATACTCACAGTGCATAAGAA+TGG - Chr7:27288352-27288371 None:intergenic 35.0%
ATCAAACAGAACTTCAGTCT+GGG - Chr7:27284879-27284898 None:intergenic 35.0%
ATTAGAGTGCAAATAAGCTC+AGG - Chr7:27282302-27282321 None:intergenic 35.0%
ATTGTTCACCATCATCTAGA+TGG - Chr7:27284139-27284158 None:intergenic 35.0%
CAAATTACAGGGGCTATTTA+AGG - Chr7:27282821-27282840 None:intergenic 35.0%
CAAGTAAACAAAGCATGCAA+GGG - Chr7:27284825-27284844 None:intergenic 35.0%
CACAAACTTTGTGGGAAATA+TGG + Chr7:27287510-27287529 MsG0780037512.01.T01:intron 35.0%
CTAAGTCAAAAGTTGAGGAA+AGG + Chr7:27284386-27284405 MsG0780037512.01.T01:CDS 35.0%
CTAATCCTCGTAAAGATTAG+TGG - Chr7:27283193-27283212 None:intergenic 35.0%
CTTAAATAGCCCCTGTAATT+TGG + Chr7:27282819-27282838 MsG0780037512.01.T01:intron 35.0%
CTTCTGTGGAGATCAAAAAT+AGG - Chr7:27284609-27284628 None:intergenic 35.0%
CTTGAAAACTGACGATAAGA+GGG - Chr7:27286384-27286403 None:intergenic 35.0%
GAAGAGCAGAAAAGTAAACA+AGG + Chr7:27286094-27286113 MsG0780037512.01.T01:CDS 35.0%
GAAGATTGAGAATGAAGATC+TGG - Chr7:27286885-27286904 None:intergenic 35.0%
GAAGATTTGACATTGAAGAG+AGG + Chr7:27287137-27287156 MsG0780037512.01.T01:intron 35.0%
GATAACAAAAGTGAGTTTGG+TGG + Chr7:27286750-27286769 MsG0780037512.01.T01:intron 35.0%
GATACTCATAATGAGACAGA+GGG + Chr7:27285961-27285980 MsG0780037512.01.T01:intron 35.0%
GATACTTATATACAGAGGAG+AGG - Chr7:27286460-27286479 None:intergenic 35.0%
GCTGTCAAATGACACATATA+AGG + Chr7:27283878-27283897 MsG0780037512.01.T01:intron 35.0%
GGAATAACCTCTCTTAGTAA+AGG - Chr7:27287925-27287944 None:intergenic 35.0%
GGATGATCCATTATATGATG+AGG + Chr7:27288764-27288783 MsG0780037512.01.T01:CDS 35.0%
GGTCTGGAAAAGGAATAAAT+AGG - Chr7:27283519-27283538 None:intergenic 35.0%
GGTTGTGCATATCTCAATTT+AGG + Chr7:27282511-27282530 MsG0780037512.01.T01:intron 35.0%
GTTCTGTTTGATGCTATGAT+TGG + Chr7:27284887-27284906 MsG0780037512.01.T01:intron 35.0%
GTTGTTCTTCACAAACTTTG+TGG + Chr7:27287501-27287520 MsG0780037512.01.T01:intron 35.0%
TACTCACAGTGCATAAGAAT+GGG - Chr7:27288351-27288370 None:intergenic 35.0%
TAGTCCTCTATATATGTCCA+AGG - Chr7:27288275-27288294 None:intergenic 35.0%
TCAGACTTTGTGGGAAATAT+AGG - Chr7:27286505-27286524 None:intergenic 35.0%
TCTTCTTCTTCTTCTCAACA+AGG + Chr7:27282601-27282620 MsG0780037512.01.T01:CDS 35.0%
TGATACTCATAATGAGACAG+AGG + Chr7:27285960-27285979 MsG0780037512.01.T01:intron 35.0%
TGTGGCATACAGTTAACTTT+AGG + Chr7:27285594-27285613 MsG0780037512.01.T01:intron 35.0%
TGTTCTTCTTCAGACTTTGT+GGG - Chr7:27286514-27286533 None:intergenic 35.0%
TTAATGCAGAGATATGTCCT+TGG + Chr7:27287870-27287889 MsG0780037512.01.T01:intron 35.0%
TTAGTATCCCATCTAGATGA+TGG + Chr7:27284128-27284147 MsG0780037512.01.T01:intron 35.0%
TTATGACCTCTACACTGTAA+CGG + Chr7:27288298-27288317 MsG0780037512.01.T01:CDS 35.0%
TTCGTTTCACTCTTCTCATT+AGG + Chr7:27284252-27284271 MsG0780037512.01.T01:intron 35.0%
TTGACCTTGGACATATATAG+AGG + Chr7:27288268-27288287 MsG0780037512.01.T01:intron 35.0%
TTGCAACAACAAACCTTGTT+TGG - Chr7:27287989-27288008 None:intergenic 35.0%
TTGTTCACCATCATCTAGAT+GGG - Chr7:27284138-27284157 None:intergenic 35.0%
TTGTTCTTCTTCAGACTTTG+TGG - Chr7:27286515-27286534 None:intergenic 35.0%
TTTGTGGGAAATATAGGTGT+GGG - Chr7:27286499-27286518 None:intergenic 35.0%
! AAGGGTTTTTGTCTTGACAA+AGG - Chr7:27285270-27285289 None:intergenic 35.0%
! ATGAAGATCTGGAATTGAAG+AGG - Chr7:27286874-27286893 None:intergenic 35.0%
! ATGCTGGTTATGAGTGATAT+TGG - Chr7:27283224-27283243 None:intergenic 35.0%
! CGAATTACAGATGCTATTTG+AGG + Chr7:27283004-27283023 MsG0780037512.01.T01:intron 35.0%
! GAGAGCACATTAAAATGAGA+TGG - Chr7:27284220-27284239 None:intergenic 35.0%
! GTCAAGACAAAAACCCTTTT+GGG + Chr7:27285272-27285291 MsG0780037512.01.T01:intron 35.0%
! TAGAGGAGACTGTTTAAAAC+CGG + Chr7:27283336-27283355 MsG0780037512.01.T01:intron 35.0%
! TGCATATCTCAATTTAGGGT+TGG + Chr7:27282516-27282535 MsG0780037512.01.T01:intron 35.0%
! TGTCAAGACAAAAACCCTTT+TGG + Chr7:27285271-27285290 MsG0780037512.01.T01:intron 35.0%
!! AAAAGTGAGTTTGGTGGTTT+TGG + Chr7:27286756-27286775 MsG0780037512.01.T01:intron 35.0%
!! AACAATGATCCTTTGAGGTA+TGG - Chr7:27287404-27287423 None:intergenic 35.0%
!! AACACTGTTGTTGATGGTTA+TGG + Chr7:27286711-27286730 MsG0780037512.01.T01:intron 35.0%
!! ATCATCATCACTTGTTGTTG+AGG + Chr7:27287347-27287366 MsG0780037512.01.T01:intron 35.0%
!! ATGCTCGTTTTGAGCAAATA+TGG + Chr7:27286072-27286091 MsG0780037512.01.T01:CDS 35.0%
!! CAATGTTCCTTTGAGATATG+GGG + Chr7:27286618-27286637 MsG0780037512.01.T01:intron 35.0%
!! GAACTTCGTAGTTTTGCTAA+AGG + Chr7:27288726-27288745 MsG0780037512.01.T01:CDS 35.0%
!! TAAAGGTGTTACTTCTGATG+TGG + Chr7:27288743-27288762 MsG0780037512.01.T01:CDS 35.0%
!! TTTAGGGTTTTTGATGGCTT+TGG + Chr7:27282641-27282660 MsG0780037512.01.T01:intron 35.0%
!!! AAGCGTCCTTTTTTCGATTT+CGG + Chr7:27282559-27282578 MsG0780037512.01.T01:CDS 35.0%
!!! GCACTGTTACTTTTTGCTAA+TGG + Chr7:27285478-27285497 MsG0780037512.01.T01:intron 35.0%
!!! GTCTGTTCTAATGTTGCTTT+TGG - Chr7:27287241-27287260 None:intergenic 35.0%
!!! GTTCTAATGTTGCTTTTGGT+TGG - Chr7:27287237-27287256 None:intergenic 35.0%
!!! GTTGTTGATGGTTATGGTTT+TGG + Chr7:27286717-27286736 MsG0780037512.01.T01:intron 35.0%
AAAAGAGGTAAGAGGGGATA+AGG - Chr7:27283540-27283559 None:intergenic 40.0%
AACAATAACGGCAGTGGTTA+TGG - Chr7:27283307-27283326 None:intergenic 40.0%
AACAATAGCACTATTGTCGG+TGG - Chr7:27287314-27287333 None:intergenic 40.0%
ACCTTGAGCAACAAAGATCA+AGG + Chr7:27286981-27287000 MsG0780037512.01.T01:intron 40.0%
ACCTTGATCTTTGTTGCTCA+AGG - Chr7:27286985-27287004 None:intergenic 40.0%
AGATTATTCGAGGAGAAGCA+GGG - Chr7:27283258-27283277 None:intergenic 40.0%
AGGATGTAGGTAATGAAGCT+TGG + Chr7:27288838-27288857 MsG0780037512.01.T01:CDS 40.0%
AGGTCAATGCAACATAACCA+TGG - Chr7:27288255-27288274 None:intergenic 40.0%
AGTTTCCTCAACAACAAGTG+AGG + Chr7:27286664-27286683 MsG0780037512.01.T01:intron 40.0%
ATAAGTGCTCACTCCAAACA+AGG + Chr7:27287973-27287992 MsG0780037512.01.T01:CDS 40.0%
ATGTAGCTGACCTCACTTAA+TGG + Chr7:27284986-27285005 MsG0780037512.01.T01:intron 40.0%
ATGTAGGTAATGAAGCTTGG+AGG + Chr7:27288841-27288860 MsG0780037512.01.T01:CDS 40.0%
ATTAAGTGAGGTCAGCTACA+TGG - Chr7:27284987-27285006 None:intergenic 40.0%
CAAAAGTCTTTGATCCTCCA+AGG - Chr7:27287890-27287909 None:intergenic 40.0%
CACGAACAATGTCATAGAAC+TGG - Chr7:27286154-27286173 None:intergenic 40.0%
CATCAAACAGAACTTCAGTC+TGG - Chr7:27284880-27284899 None:intergenic 40.0%
CTCGATGAAAAGAGGTAAGA+GGG - Chr7:27283547-27283566 None:intergenic 40.0%
CTTTGTGGGAAATATAGGTG+TGG - Chr7:27286500-27286519 None:intergenic 40.0%
GAACTTAACAATAACGGCAG+TGG - Chr7:27283313-27283332 None:intergenic 40.0%
GAAGAACAACACCACCAAAA+TGG + Chr7:27286526-27286545 MsG0780037512.01.T01:intron 40.0%
GAAGAACTTTCAGCCATGTT+AGG - Chr7:27282331-27282350 None:intergenic 40.0%
GAAGACTGCGAGAAAGAATA+AGG - Chr7:27286044-27286063 None:intergenic 40.0%
GAATTGAAGAGGTCTTTCGA+GGG - Chr7:27286863-27286882 None:intergenic 40.0%
GAGATTTCGGAAGATGAAGA+AGG + Chr7:27288624-27288643 MsG0780037512.01.T01:CDS 40.0%
GATAATGCACCATACCTCAA+AGG + Chr7:27287392-27287411 MsG0780037512.01.T01:intron 40.0%
GCTTGAAAACTGACGATAAG+AGG - Chr7:27286385-27286404 None:intergenic 40.0%
GGGAAAACAATGATCCTTTG+AGG - Chr7:27287409-27287428 None:intergenic 40.0%
GGTAAAGATGAGCAAAGACA+GGG - Chr7:27288520-27288539 None:intergenic 40.0%
GGTATTAACCCTAGTGGTAA+AGG - Chr7:27282800-27282819 None:intergenic 40.0%
GTATGTCACCTTTACCACTA+GGG + Chr7:27282789-27282808 MsG0780037512.01.T01:intron 40.0%
TAACCTCTCTTAGTAAAGGG+AGG - Chr7:27287921-27287940 None:intergenic 40.0%
TACACAGTCACATGTGCATA+TGG + Chr7:27284495-27284514 MsG0780037512.01.T01:intron 40.0%
TCAAACAGAACTTCAGTCTG+GGG - Chr7:27284878-27284897 None:intergenic 40.0%
TCAATGGAAACAAGCGAGTT+AGG - Chr7:27287274-27287293 None:intergenic 40.0%
TCACTTAATGGGAAAAGGCT+TGG + Chr7:27284998-27285017 MsG0780037512.01.T01:intron 40.0%
TCGAAAAAAGGACGCTTGAA+TGG - Chr7:27282556-27282575 None:intergenic 40.0%
TCGATGAAAAGAGGTAAGAG+GGG - Chr7:27283546-27283565 None:intergenic 40.0%
TCGTCCGGATAATCATTCAT+TGG - Chr7:27288606-27288625 None:intergenic 40.0%
TGACCTCACTTAATGGGAAA+AGG + Chr7:27284993-27285012 MsG0780037512.01.T01:intron 40.0%
TGATTATCCGGACGAGATTT+CGG + Chr7:27288611-27288630 MsG0780037512.01.T01:CDS 40.0%
TGCACACGCAGAAAAAAGAA+GGG - Chr7:27284463-27284482 None:intergenic 40.0%
TGTAGCTGACCTCACTTAAT+GGG + Chr7:27284987-27285006 MsG0780037512.01.T01:intron 40.0%
TGTATGTCACCTTTACCACT+AGG + Chr7:27282788-27282807 MsG0780037512.01.T01:intron 40.0%
TTACCTCCCTTTACTAAGAG+AGG + Chr7:27287915-27287934 MsG0780037512.01.T01:CDS 40.0%
! AAGCCTTTTCCCATTAAGTG+AGG - Chr7:27284999-27285018 None:intergenic 40.0%
! AATGATGATGACGAGGATGT+AGG + Chr7:27288825-27288844 MsG0780037512.01.T01:CDS 40.0%
! AGAATTGTCAGATGATGACG+AGG + Chr7:27288692-27288711 MsG0780037512.01.T01:CDS 40.0%
! AGAGGAGACTGTTTAAAACC+GGG + Chr7:27283337-27283356 MsG0780037512.01.T01:intron 40.0%
! AGGGCATGTCTGAAAGTATA+CGG - Chr7:27284806-27284825 None:intergenic 40.0%
! ATATGGGGCATTCTCATCAA+TGG + Chr7:27286633-27286652 MsG0780037512.01.T01:intron 40.0%
! TATGGGGCATTCTCATCAAT+GGG + Chr7:27286634-27286653 MsG0780037512.01.T01:intron 40.0%
! TGGTTATGTTGCATTGACCT+TGG + Chr7:27288255-27288274 MsG0780037512.01.T01:intron 40.0%
!! AAGAGCTGATTTTGCTTCTG+TGG - Chr7:27284623-27284642 None:intergenic 40.0%
!! ATCATCCTCACTTGTTGTTG+AGG - Chr7:27286672-27286691 None:intergenic 40.0%
!! ATGTTACAGAAAGCATCGAG+TGG - Chr7:27282424-27282443 None:intergenic 40.0%
!! CAGAGTTCAAGTTGAAGAAG+AGG + Chr7:27288437-27288456 MsG0780037512.01.T01:intron 40.0%
!!! TGTTGCTTTTGGTTGGTTTG+TGG - Chr7:27287230-27287249 None:intergenic 40.0%
AACGAAGCCTGTTGTCGTTA+GGG + Chr7:27282375-27282394 MsG0780037512.01.T01:CDS 45.0%
ACCAAAATGGCTGAAGCTAC+GGG + Chr7:27286539-27286558 MsG0780037512.01.T01:intron 45.0%
ACTTTGTGGGAAATATGGCG+TGG + Chr7:27287515-27287534 MsG0780037512.01.T01:intron 45.0%
ATAATCTTGCTAGACCCGAG+CGG + Chr7:27283914-27283933 MsG0780037512.01.T01:intron 45.0%
ATAGCACGCTCGATGAAAAG+AGG - Chr7:27283555-27283574 None:intergenic 45.0%
ATGCAGAGATATGTCCTTGG+AGG + Chr7:27287873-27287892 MsG0780037512.01.T01:intron 45.0%
ATGGAAACAAGCGAGTTAGG+TGG - Chr7:27287271-27287290 None:intergenic 45.0%
ATTCAGTCACAAATCCGCTC+GGG - Chr7:27283931-27283950 None:intergenic 45.0%
ATTCCAGAACTGGTGTACCA+TGG - Chr7:27283420-27283439 None:intergenic 45.0%
CACCAAAATGGCTGAAGCTA+CGG + Chr7:27286538-27286557 MsG0780037512.01.T01:intron 45.0%
CAGATTATTCGAGGAGAAGC+AGG - Chr7:27283259-27283278 None:intergenic 45.0%
CATTCAGTCACAAATCCGCT+CGG - Chr7:27283932-27283951 None:intergenic 45.0%
CATTGAAGAGAGGTCGTTAG+AGG + Chr7:27287147-27287166 MsG0780037512.01.T01:intron 45.0%
CGTTTAACCCTAACGACAAC+AGG - Chr7:27282385-27282404 None:intergenic 45.0%
CTGCACACGCAGAAAAAAGA+AGG - Chr7:27284464-27284483 None:intergenic 45.0%
CTTTGTATGTGGACCTCACT+AGG + Chr7:27286239-27286258 MsG0780037512.01.T01:intron 45.0%
GAATCTAGATCAGTGTGCGT+GGG + Chr7:27287605-27287624 MsG0780037512.01.T01:intron 45.0%
GAGAATGCCCCATATCTCAA+AGG - Chr7:27286628-27286647 None:intergenic 45.0%
GAGATCAAACAGGCCCAAAA+GGG - Chr7:27285288-27285307 None:intergenic 45.0%
GATTATGAAGGTCAAGGTGC+AGG + Chr7:27288795-27288814 MsG0780037512.01.T01:CDS 45.0%
GATTATTCGAGGAGAAGCAG+GGG - Chr7:27283257-27283276 None:intergenic 45.0%
GATTGAGCGAATCAGGTTCA+TGG + Chr7:27283084-27283103 MsG0780037512.01.T01:intron 45.0%
GCACACGCAGAAAAAAGAAG+GGG - Chr7:27284462-27284481 None:intergenic 45.0%
GCATGCTTCTATTCCAGAAC+TGG - Chr7:27283430-27283449 None:intergenic 45.0%
GCTCGATGAAAAGAGGTAAG+AGG - Chr7:27283548-27283567 None:intergenic 45.0%
GGAATTGAAGAGGTCTTTCG+AGG - Chr7:27286864-27286883 None:intergenic 45.0%
GGGAGATAAGTCAAGTAGAG+AGG - Chr7:27284442-27284461 None:intergenic 45.0%
GGGTAAAGATGAGCAAAGAC+AGG - Chr7:27288521-27288540 None:intergenic 45.0%
TAGGTAATGAAGCTTGGAGG+TGG + Chr7:27288844-27288863 MsG0780037512.01.T01:CDS 45.0%
TATCCATGGTACACCAGTTC+TGG + Chr7:27283414-27283433 MsG0780037512.01.T01:intron 45.0%
TCAATCTCTGCAGCAGCATT+GGG - Chr7:27287946-27287965 None:intergenic 45.0%
TCAGAAGAAAGCAAGCACAG+CGG + Chr7:27288660-27288679 MsG0780037512.01.T01:CDS 45.0%
TCATCTTCCGAAATCTCGTC+CGG - Chr7:27288621-27288640 None:intergenic 45.0%
TCTCATCCGTTACAGTGTAG+AGG - Chr7:27288307-27288326 None:intergenic 45.0%
TCTGCTAGCATAATCGAGTG+AGG - Chr7:27283110-27283129 None:intergenic 45.0%
TGAACTGGATTGAGCGAATC+AGG + Chr7:27283077-27283096 MsG0780037512.01.T01:intron 45.0%
TGAATCTAGATCAGTGTGCG+TGG + Chr7:27287604-27287623 MsG0780037512.01.T01:intron 45.0%
TGAGATCAAACAGGCCCAAA+AGG - Chr7:27285289-27285308 None:intergenic 45.0%
TTCAATCTCTGCAGCAGCAT+TGG - Chr7:27287947-27287966 None:intergenic 45.0%
! ACAAGCGAGTTAGGTGGTTT+TGG - Chr7:27287265-27287284 None:intergenic 45.0%
! CGATGACAATGATGATGACG+AGG + Chr7:27288818-27288837 MsG0780037512.01.T01:CDS 45.0%
! GGCTTTGGTCAGATTATTCG+AGG - Chr7:27283268-27283287 None:intergenic 45.0%
!! GAAGGTTTTGGTGCAACATG+TGG + Chr7:27284054-27284073 MsG0780037512.01.T01:CDS 45.0%
!! TCAGAAGCACTTCTAGAAGC+AGG - Chr7:27284364-27284383 None:intergenic 45.0%
!! AGTAATAAAAATAAATAAAT+TGG - Chr7:27285851-27285870 None:intergenic 5.0%
!! ATATATATATATATTGATAT+AGG + Chr7:27287088-27287107 MsG0780037512.01.T01:intron 5.0%
!! ATCAATATATATAAATATAT+AGG + Chr7:27286919-27286938 MsG0780037512.01.T01:intron 5.0%
!!! ATTTTATTTAAATATTTTCT+GGG + Chr7:27288060-27288079 MsG0780037512.01.T01:intron 5.0%
!!! TATTTTATTTAAATATTTTC+TGG + Chr7:27288059-27288078 MsG0780037512.01.T01:intron 5.0%
AAGCTTGGAGGTGGTCATAC+CGG + Chr7:27288853-27288872 MsG0780037512.01.T01:CDS 50.0%
ACAGACGCTACGCTAATGTG+TGG + Chr7:27285576-27285595 MsG0780037512.01.T01:intron 50.0%
ACTTCAGTCTGGGGACTGTA+AGG - Chr7:27284869-27284888 None:intergenic 50.0%
AGGAGAAGCAGGGGAATGAA+TGG - Chr7:27283248-27283267 None:intergenic 50.0%
AGGTAAGAGGGGATAAGGTC+TGG - Chr7:27283535-27283554 None:intergenic 50.0%
CAACGAAGCCTGTTGTCGTT+AGG + Chr7:27282374-27282393 MsG0780037512.01.T01:CDS 50.0%
CTAACGACAACAGGCTTCGT+TGG - Chr7:27282376-27282395 None:intergenic 50.0%
GAGGGGATAAGGTCTGGAAA+AGG - Chr7:27283529-27283548 None:intergenic 50.0%
GCATCGAGTGGAGAATGAGA+GGG - Chr7:27282412-27282431 None:intergenic 50.0%
GCATCTGTAATTCGGGAACG+AGG - Chr7:27282998-27283017 None:intergenic 50.0%
GGAGACAATAAGCAGCTCTG+AGG + Chr7:27284075-27284094 MsG0780037512.01.T01:CDS 50.0%
GGATGAGACGATCGTTGAAG+AGG + Chr7:27288319-27288338 MsG0780037512.01.T01:CDS 50.0%
GGCTGAAAGTTCTTCGTCTC+CGG + Chr7:27282336-27282355 MsG0780037512.01.T01:CDS 50.0%
GGTCGTTAGAGGTCTCAAGA+TGG + Chr7:27287158-27287177 MsG0780037512.01.T01:intron 50.0%
TGGTTATGGCAACCTGAGGA+TGG - Chr7:27283293-27283312 None:intergenic 50.0%
! AGCATCGAGTGGAGAATGAG+AGG - Chr7:27282413-27282432 None:intergenic 50.0%
! GTCAGATGATGACGAGGATG+TGG + Chr7:27288698-27288717 MsG0780037512.01.T01:CDS 50.0%
! TCCCGTAGCTTCAGCCATTT+TGG - Chr7:27286543-27286562 None:intergenic 50.0%
!! CGTAGCTTCAGCCATTTTGG+TGG - Chr7:27286540-27286559 None:intergenic 50.0%
ACAACAGGCTTCGTTGGAGC+CGG - Chr7:27282370-27282389 None:intergenic 55.0%
CAGGGGAATGAATGGCATGC+TGG - Chr7:27283240-27283259 None:intergenic 55.0%
GCAGTGGTTATGGCAACCTG+AGG - Chr7:27283297-27283316 None:intergenic 55.0%
TATGGCAACCTGAGGATGGC+TGG - Chr7:27283289-27283308 None:intergenic 55.0%
! GTCTGCGTCGGTGCTTCATA+GGG + Chr7:27282762-27282781 MsG0780037512.01.T01:intron 55.0%
! TGTCTGCGTCGGTGCTTCAT+AGG + Chr7:27282761-27282780 MsG0780037512.01.T01:intron 55.0%
!! AACCTGAGGATGGCTGGCTT+TGG - Chr7:27283283-27283302 None:intergenic 55.0%
!! ATGAAGCACCGACGCAGACA+CGG - Chr7:27282761-27282780 None:intergenic 55.0%
GACCAAAGCCAGCCATCCTC+AGG + Chr7:27283278-27283297 MsG0780037512.01.T01:intron 60.0%
TTCGTCTCCGGCTCCAGTTC+CGG + Chr7:27282348-27282367 MsG0780037512.01.T01:CDS 60.0%
CGTGGTGTCCGTGTCTGCGT+CGG + Chr7:27282750-27282769 MsG0780037512.01.T01:intron 65.0%
GGCTTCGTTGGAGCCGGAAC+TGG - Chr7:27282364-27282383 None:intergenic 65.0%
GTTGGAGCCGGAACTGGAGC+CGG - Chr7:27282358-27282377 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 27282271 27288878 27282271 ID=MsG0780037512.01;Name=MsG0780037512.01
Chr7 mRNA 27282271 27288878 27282271 ID=MsG0780037512.01.T01;Parent=MsG0780037512.01;Name=MsG0780037512.01.T01;_AED=0.42;_eAED=0.42;_QI=63|0.75|0.88|1|0.87|0.88|9|0|350
Chr7 exon 27282271 27282436 27282271 ID=MsG0780037512.01.T01:exon:12592;Parent=MsG0780037512.01.T01
Chr7 exon 27282533 27282622 27282533 ID=MsG0780037512.01.T01:exon:12593;Parent=MsG0780037512.01.T01
Chr7 exon 27284038 27284126 27284038 ID=MsG0780037512.01.T01:exon:12594;Parent=MsG0780037512.01.T01
Chr7 exon 27284358 27284432 27284358 ID=MsG0780037512.01.T01:exon:12595;Parent=MsG0780037512.01.T01
Chr7 exon 27286059 27286210 27286059 ID=MsG0780037512.01.T01:exon:12596;Parent=MsG0780037512.01.T01
Chr7 exon 27287879 27287994 27287879 ID=MsG0780037512.01.T01:exon:12597;Parent=MsG0780037512.01.T01
Chr7 exon 27288288 27288363 27288288 ID=MsG0780037512.01.T01:exon:12598;Parent=MsG0780037512.01.T01
Chr7 exon 27288440 27288510 27288440 ID=MsG0780037512.01.T01:exon:12599;Parent=MsG0780037512.01.T01
Chr7 exon 27288598 27288878 27288598 ID=MsG0780037512.01.T01:exon:12600;Parent=MsG0780037512.01.T01
Chr7 five_prime_UTR 27282271 27282333 27282271 ID=MsG0780037512.01.T01:five_prime_utr;Parent=MsG0780037512.01.T01
Chr7 CDS 27282334 27282436 27282334 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Chr7 CDS 27282533 27282622 27282533 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Chr7 CDS 27284038 27284126 27284038 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Chr7 CDS 27284358 27284432 27284358 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Chr7 CDS 27286059 27286210 27286059 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Chr7 CDS 27287879 27287994 27287879 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Chr7 CDS 27288288 27288363 27288288 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Chr7 CDS 27288440 27288510 27288440 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Chr7 CDS 27288598 27288878 27288598 ID=MsG0780037512.01.T01:cds;Parent=MsG0780037512.01.T01
Gene Sequence

>MsG0780037512.01.T01

ATGGCTGAAAGTTCTTCGTCTCCGGCTCCAGTTCCGGCTCCAACGAAGCCTGTTGTCGTTAGGGTTAAACGAAAACCCTCTCATTCTCCACTCGATGCTTTCTGGTTGGAAATCAACGAGAGACCATTCAAGCGTCCTTTTTTCGATTTCGGAAATTTATCAATCTCCGATTCTTCTTCTTCTTCTCAACAAGTTGAAATTCATAACAAGAAGGTTTTGGTGCAACATGTGGAGACAATAAGCAGCTCTGAGGTCACTTTAGATATTGTGCAATCATTTGTGGAACCTGCTTCTAGAAGTGCTTCTGAATCTAAGTCAAAAGTTGAGGAAAGGAAGAACTTCTTCAGAAATGTTAATTCTTCAGCTAGAGATGCTCGTTTTGAGCAAATATGGAAGAGCAGAAAAGTAAACAAGGGGACAGCTGATGAAAACGCATTACAAGAAATATGCCAGTTCTATGACATTGTTCGTGTTGACTCTGAAGAAAAAGTTAATGAGGTGCAACAAGAAGATATGTCCTTGGAGGATCAAAGACTTTTGTCTAGTTACCTCCCTTTACTAAGAGAGGTTATTCCCAATGCTGCTGCAGAGATTGAAAATGATATAAGTGCTCACTCCAAACAAGAGGACTATGTTTATGACCTCTACACTGTAACGGATGAGACGATCGTTGAAGAGGATTCTTCCCATTCTTATGCACTAGTTCAAGTTGAAGAAGAGGATTATTTTGATGGCCTTGACAATTCAGATTATGAAACTGATGACTCAAATGACAATCCAATGAATGATTATCCGGACGAGATTTCGGAAGATGAAGAAGGTTCTGAGTGTGAATCAGAAGAAAGCAAGCACAGCGGATCTAGTAAAGAATTGTCAGATGATGACGAGGATGTGGATGATGAACTTCGTAGTTTTGCTAAAGGTGTTACTTCTGATGTGGATGATCCATTATATGATGAGGATTTTGATGATTATGAAGGTCAAGGTGCAGGCGATGACAATGATGATGACGAGGATGTAGGTAATGAAGCTTGGAGGTGGTCATACCGGTGA

Protein sequence

>MsG0780037512.01.T01

MAESSSSPAPVPAPTKPVVVRVKRKPSHSPLDAFWLEINERPFKRPFFDFGNLSISDSSSSSQQVEIHNKKVLVQHVETISSSEVTLDIVQSFVEPASRSASESKSKVEERKNFFRNVNSSARDARFEQIWKSRKVNKGTADENALQEICQFYDIVRVDSEEKVNEVQQEDMSLEDQRLLSSYLPLLREVIPNAAAEIENDISAHSKQEDYVYDLYTVTDETIVEEDSSHSYALVQVEEEDYFDGLDNSDYETDDSNDNPMNDYPDEISEDEEGSECESEESKHSGSSKELSDDDEDVDDELRSFAKGVTSDVDDPLYDEDFDDYEGQGAGDDNDDDEDVGNEAWRWSYR*