AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043897.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043897.01.T01 MTR_4g021690 55.000 140 60 3 10 149 240 376 1.67e-38 139
MsG0880043897.01.T01 MTR_4g022460 51.429 140 65 3 10 149 240 376 1.05e-35 130
MsG0880043897.01.T01 MTR_8g043600 49.286 140 70 1 18 157 207 345 3.78e-35 128
MsG0880043897.01.T01 MTR_4g022560 53.030 132 60 2 18 149 247 376 3.95e-33 123
MsG0880043897.01.T01 MTR_4g022960 50.714 140 66 3 10 149 240 376 4.44e-33 123
MsG0880043897.01.T01 MTR_8g038570 44.961 129 71 0 21 149 273 401 4.65e-30 114
MsG0880043897.01.T01 MTR_4g022540 51.852 135 63 2 15 149 244 376 2.10e-29 112
MsG0880043897.01.T01 MTR_6g452490 45.588 136 73 1 15 150 252 386 8.18e-29 111
MsG0880043897.01.T01 MTR_8g011550 42.069 145 82 2 7 150 246 389 1.39e-28 110
MsG0880043897.01.T01 MTR_4g022480 53.030 132 60 2 18 149 247 376 1.70e-28 110
MsG0880043897.01.T01 MTR_0065s0100 42.754 138 77 2 14 150 254 390 1.26e-27 107
MsG0880043897.01.T01 MTR_8g010440 42.105 133 76 1 18 150 255 386 1.39e-27 107
MsG0880043897.01.T01 MTR_8g011600 43.066 137 76 2 14 149 86 221 1.86e-27 107
MsG0880043897.01.T01 MTR_3g018930 44.961 129 70 1 24 152 269 396 6.03e-27 105
MsG0880043897.01.T01 MTR_8g038590 42.636 129 73 1 21 149 270 397 6.65e-27 105
MsG0880043897.01.T01 MTR_3g018930 44.961 129 70 1 24 152 269 396 6.73e-27 105
MsG0880043897.01.T01 MTR_3g022600 40.741 135 80 0 18 152 261 395 7.77e-27 105
MsG0880043897.01.T01 MTR_3g015260 44.030 134 72 2 21 152 264 396 1.26e-26 105
MsG0880043897.01.T01 MTR_3g015260 44.030 134 72 2 21 152 264 396 1.59e-26 104
MsG0880043897.01.T01 MTR_8g011180 41.176 136 78 2 15 149 253 387 1.70e-26 104
MsG0880043897.01.T01 MTR_7g013560 40.580 138 80 2 14 150 253 389 1.74e-26 104
MsG0880043897.01.T01 MTR_1g030770 40.146 137 80 2 14 149 252 387 6.87e-26 102
MsG0880043897.01.T01 MTR_3g015500 40.000 140 82 2 15 153 279 417 8.55e-26 102
MsG0880043897.01.T01 MTR_3g015550 40.000 140 82 2 15 153 278 416 1.22e-25 102
MsG0880043897.01.T01 MTR_3g015560 40.714 140 81 2 15 153 241 379 1.26e-25 102
MsG0880043897.01.T01 MTR_8g011300 41.912 136 78 1 15 150 251 385 1.26e-25 102
MsG0880043897.01.T01 MTR_3g015550 40.000 140 82 2 15 153 241 379 1.32e-25 102
MsG0880043897.01.T01 MTR_4g050790 40.000 140 82 2 15 153 241 379 1.84e-25 101
MsG0880043897.01.T01 MTR_3g022300 37.778 135 84 0 18 152 261 395 2.54e-25 101
MsG0880043897.01.T01 MTR_0425s0020 39.259 135 82 0 18 152 261 395 2.86e-25 101
MsG0880043897.01.T01 MTR_5g070960 43.609 133 66 3 29 153 254 385 4.25e-25 100
MsG0880043897.01.T01 MTR_5g095910 42.336 137 75 3 14 149 259 392 4.37e-25 100
MsG0880043897.01.T01 MTR_8g011590 40.288 139 80 3 14 150 135 272 4.85e-25 100
MsG0880043897.01.T01 MTR_3g022870 38.889 144 87 1 9 152 235 377 6.27e-25 100
MsG0880043897.01.T01 MTR_3g022870 38.889 144 87 1 9 152 235 377 6.62e-25 100
MsG0880043897.01.T01 MTR_8g011280 36.429 140 87 2 14 152 117 255 9.19e-25 99.8
MsG0880043897.01.T01 MTR_5g072340 43.609 133 66 3 29 153 254 385 1.63e-24 99.0
MsG0880043897.01.T01 MTR_5g071823 38.667 150 82 3 12 153 237 384 1.73e-24 99.0
MsG0880043897.01.T01 MTR_5g071850 38.667 150 82 3 12 153 237 384 1.73e-24 99.0
MsG0880043897.01.T01 MTR_6g016430 38.346 133 81 1 18 150 246 377 1.78e-24 99.0
MsG0880043897.01.T01 MTR_8g027540 39.259 135 81 1 14 148 253 386 2.28e-24 98.6
MsG0880043897.01.T01 MTR_3g018980 44.262 122 67 1 31 152 274 394 3.06e-24 98.2
MsG0880043897.01.T01 MTR_3g018980 44.262 122 67 1 31 152 274 394 3.21e-24 98.2
MsG0880043897.01.T01 MTR_5g071310 40.789 152 80 4 10 153 231 380 3.27e-24 98.2
MsG0880043897.01.T01 MTR_3g022400 36.806 144 90 1 9 152 229 371 3.53e-24 98.2
MsG0880043897.01.T01 MTR_3g019000 42.742 124 70 1 29 152 263 385 3.86e-24 97.8
MsG0880043897.01.T01 MTR_3g022400 36.806 144 90 1 9 152 229 371 3.94e-24 97.8
MsG0880043897.01.T01 MTR_7g078300 35.811 148 94 1 2 149 249 395 4.28e-24 97.8
MsG0880043897.01.T01 MTR_3g027420 37.241 145 90 1 5 149 232 375 4.92e-24 97.8
MsG0880043897.01.T01 MTR_2g014840 42.336 137 75 3 14 149 256 389 5.25e-24 97.4
MsG0880043897.01.T01 MTR_4g119195 38.816 152 90 2 2 153 254 402 5.78e-24 97.4
MsG0880043897.01.T01 MTR_7g091550 35.762 151 96 1 3 153 260 409 5.82e-24 97.4
MsG0880043897.01.T01 MTR_7g091550 31.126 151 103 1 3 153 1095 1244 1.42e-20 87.8
MsG0880043897.01.T01 MTR_4g119195 38.816 152 90 2 2 153 254 402 5.84e-24 97.4
MsG0880043897.01.T01 MTR_5g076840 36.986 146 91 1 9 153 259 404 7.08e-24 97.1
MsG0880043897.01.T01 MTR_3g022920 37.500 144 89 1 9 152 224 366 1.01e-23 96.7
MsG0880043897.01.T01 MTR_8g011170 38.235 136 82 2 15 149 239 373 1.19e-23 96.7
MsG0880043897.01.T01 MTR_6g016420 35.915 142 87 2 18 156 244 384 1.49e-23 96.3
MsG0880043897.01.T01 MTR_5g035530 39.568 139 82 2 15 153 132 268 1.55e-23 96.3
MsG0880043897.01.T01 MTR_6g016420 35.915 142 87 2 18 156 244 384 1.70e-23 95.9
MsG0880043897.01.T01 MTR_5g037450 37.908 153 91 3 3 153 243 393 2.77e-23 95.5
MsG0880043897.01.T01 MTR_7g078640 34.868 152 98 1 2 153 249 399 3.94e-23 95.1
MsG0880043897.01.T01 MTR_3g025360 36.806 144 90 1 9 152 261 403 4.90e-23 94.7
MsG0880043897.01.T01 MTR_3g015280 39.706 136 80 2 15 149 241 375 6.54e-23 94.4
MsG0880043897.01.T01 MTR_3g019040 42.623 122 69 1 31 152 274 394 6.75e-23 94.4
MsG0880043897.01.T01 MTR_1g023600 36.667 150 85 4 12 153 234 381 8.83e-23 94.0
MsG0880043897.01.T01 MTR_5g070490 38.667 150 82 4 12 153 237 384 8.83e-23 94.0
MsG0880043897.01.T01 MTR_2g014720 41.270 126 72 2 25 149 171 295 9.56e-23 94.0
MsG0880043897.01.T01 MTR_8g011850 39.161 143 82 3 14 152 1298 1439 9.95e-23 94.0
MsG0880043897.01.T01 MTR_8g037220 37.410 139 86 1 14 152 1249 1386 1.17e-22 93.6
MsG0880043897.01.T01 MTR_3g022130 36.296 135 86 0 18 152 235 369 1.25e-22 93.6
MsG0880043897.01.T01 MTR_8g037220 37.410 139 86 1 14 152 1028 1165 1.26e-22 93.6
MsG0880043897.01.T01 MTR_5g035480 38.255 149 88 3 3 149 243 389 1.53e-22 93.2
MsG0880043897.01.T01 MTR_1g047870 35.507 138 88 1 6 143 24 160 1.61e-22 92.8
MsG0880043897.01.T01 MTR_7g491190 33.333 153 101 1 1 153 221 372 2.46e-22 92.8
MsG0880043897.01.T01 MTR_2g014820 41.007 139 72 4 14 148 256 388 2.72e-22 92.4
MsG0880043897.01.T01 MTR_2g078070 36.496 137 85 2 15 150 257 392 3.61e-22 92.4
MsG0880043897.01.T01 MTR_7g091110 36.434 129 81 1 14 142 273 400 4.00e-22 92.0
MsG0880043897.01.T01 MTR_3g027200 37.705 122 76 0 31 152 274 395 4.12e-22 92.0
MsG0880043897.01.T01 MTR_7g091200 34.286 140 91 1 14 153 253 391 4.49e-22 92.0
MsG0880043897.01.T01 MTR_7g021000 40.876 137 76 3 18 152 247 380 4.89e-22 92.0
MsG0880043897.01.T01 MTR_4g126000 36.667 150 85 3 12 153 179 326 4.90e-22 92.0
MsG0880043897.01.T01 MTR_7g021000 40.876 137 76 3 18 152 247 380 4.97e-22 91.7
MsG0880043897.01.T01 MTR_3g027470 34.848 132 86 0 21 152 173 304 5.32e-22 91.7
MsG0880043897.01.T01 MTR_5g070470 38.000 150 83 3 12 153 237 384 5.55e-22 91.7
MsG0880043897.01.T01 MTR_3g026660 39.706 136 80 2 15 150 253 386 5.66e-22 91.7
MsG0880043897.01.T01 MTR_0267s0070 36.364 132 84 0 18 149 268 399 5.82e-22 91.7
MsG0880043897.01.T01 MTR_3g026660 39.706 136 80 2 15 150 253 386 5.92e-22 91.7
MsG0880043897.01.T01 MTR_0005s0200 38.843 121 71 2 24 143 283 401 6.36e-22 91.7
MsG0880043897.01.T01 MTR_3g023030 35.606 132 85 0 21 152 266 397 6.42e-22 91.7
MsG0880043897.01.T01 MTR_3g023030 35.606 132 85 0 21 152 266 397 6.47e-22 91.7
MsG0880043897.01.T01 MTR_3g014080 38.235 136 79 1 14 149 260 390 7.33e-22 91.3
MsG0880043897.01.T01 MTR_7g491180 36.434 129 81 1 14 142 272 399 7.55e-22 91.3
MsG0880043897.01.T01 MTR_7g091190 36.434 129 81 1 14 142 272 399 7.55e-22 91.3
MsG0880043897.01.T01 MTR_3g014080 38.235 136 79 1 14 149 260 390 8.21e-22 91.3
MsG0880043897.01.T01 MTR_1g078490 33.103 145 96 1 9 153 249 392 8.71e-22 91.3
MsG0880043897.01.T01 MTR_3g027250 38.411 151 91 2 3 152 230 379 1.22e-21 90.9
MsG0880043897.01.T01 MTR_3g022230 39.344 122 74 0 31 152 274 395 1.26e-21 90.9
MsG0880043897.01.T01 MTR_5g071570 39.716 141 75 4 21 153 247 385 1.36e-21 90.5
MsG0880043897.01.T01 MTR_5g040770 38.129 139 84 2 15 153 18 154 1.45e-21 90.5
MsG0880043897.01.T01 MTR_3g070590 39.062 128 74 3 24 149 250 375 1.52e-21 90.5
MsG0880043897.01.T01 MTR_7g071940 37.333 150 84 3 12 153 232 379 1.54e-21 90.5
MsG0880043897.01.T01 MTR_3g022790 37.162 148 92 1 5 152 239 385 1.60e-21 90.5
MsG0880043897.01.T01 MTR_3g014040 35.252 139 88 1 14 152 262 398 3.53e-21 89.4
MsG0880043897.01.T01 MTR_4g094540 36.667 150 88 2 10 153 255 403 3.61e-21 89.4
MsG0880043897.01.T01 MTR_1g008240 35.766 137 84 3 13 149 245 377 3.87e-21 89.4
MsG0880043897.01.T01 MTR_3g071130 39.062 128 74 3 24 149 250 375 5.16e-21 89.0
MsG0880043897.01.T01 MTR_3g071070 39.062 128 74 3 24 149 45 170 7.07e-21 88.6
MsG0880043897.01.T01 MTR_5g072140 42.105 133 67 4 29 153 254 384 9.87e-21 88.2
MsG0880043897.01.T01 MTR_3g086070 38.732 142 83 3 14 153 240 379 1.02e-20 88.2
MsG0880043897.01.T01 MTR_8g030860 36.429 140 84 3 12 149 263 399 1.18e-20 87.8
MsG0880043897.01.T01 MTR_5g071780 36.667 150 85 3 12 153 237 384 1.40e-20 87.8
MsG0880043897.01.T01 MTR_5g071220 36.667 150 85 3 12 153 237 384 1.56e-20 87.4
MsG0880043897.01.T01 MTR_5g071220 36.667 150 85 3 12 153 237 384 1.57e-20 87.4
MsG0880043897.01.T01 MTR_1g022380 35.333 150 87 4 12 153 232 379 1.63e-20 87.4
MsG0880043897.01.T01 MTR_3g033080 34.328 134 85 2 18 149 259 391 1.72e-20 87.4
MsG0880043897.01.T01 MTR_3g023320 39.286 140 77 4 18 153 245 380 1.81e-20 87.4
MsG0880043897.01.T01 MTR_1g047910 33.813 139 91 1 15 153 271 408 2.69e-20 87.0
MsG0880043897.01.T01 MTR_4g050410 38.333 120 71 2 32 149 273 391 2.72e-20 87.0
MsG0880043897.01.T01 MTR_7g078630 36.585 123 77 1 9 131 190 311 2.92e-20 86.7
MsG0880043897.01.T01 MTR_3g033110 37.500 128 77 2 24 149 265 391 3.46e-20 86.7
MsG0880043897.01.T01 MTR_4g055630 39.726 146 78 4 12 149 237 380 3.57e-20 86.7
MsG0880043897.01.T01 MTR_3g035840 33.333 147 91 3 9 149 247 392 4.95e-20 85.9
MsG0880043897.01.T01 MTR_7g091140 34.884 129 83 1 14 142 272 399 5.39e-20 85.9
MsG0880043897.01.T01 MTR_7g091140 33.121 157 87 5 7 153 956 1104 9.47e-16 73.9
MsG0880043897.01.T01 MTR_3g435740 37.500 128 77 2 24 149 310 436 6.45e-20 85.9
MsG0880043897.01.T01 MTR_5g035300 37.778 135 82 2 15 149 253 385 7.29e-20 85.5
MsG0880043897.01.T01 MTR_3g034460 34.375 128 81 2 24 149 250 376 7.55e-20 85.5
MsG0880043897.01.T01 MTR_3g007190 34.848 132 86 0 18 149 179 310 7.60e-20 85.5
MsG0880043897.01.T01 MTR_8g036195 39.437 142 82 3 14 153 241 380 8.17e-20 85.5
MsG0880043897.01.T01 MTR_3g033860 33.577 137 88 2 15 149 257 392 9.09e-20 85.5
MsG0880043897.01.T01 MTR_3g035940 34.014 147 90 3 9 149 247 392 9.26e-20 85.5
MsG0880043897.01.T01 MTR_3g035480 33.333 147 91 3 9 149 247 392 1.18e-19 85.1
MsG0880043897.01.T01 MTR_1g047800 35.252 139 85 3 18 152 249 386 1.19e-19 85.1
MsG0880043897.01.T01 MTR_5g034770 35.570 149 91 3 3 149 224 369 1.26e-19 85.1
MsG0880043897.01.T01 MTR_3g022570 37.302 126 78 1 24 149 289 413 1.33e-19 85.1
MsG0880043897.01.T01 MTR_3g035960 34.014 147 90 3 9 149 247 392 1.75e-19 84.7
MsG0880043897.01.T01 MTR_0002s0110 34.014 147 90 3 9 149 247 392 1.77e-19 84.7
MsG0880043897.01.T01 MTR_3g034430 33.577 137 88 2 15 149 257 392 1.97e-19 84.3
MsG0880043897.01.T01 MTR_5g037500 37.415 147 74 4 15 153 253 389 2.08e-19 84.3
MsG0880043897.01.T01 MTR_4g119140 35.915 142 84 2 9 149 242 377 2.18e-19 84.3
MsG0880043897.01.T01 MTR_3g028040 33.577 137 88 2 15 149 257 392 2.36e-19 84.3
MsG0880043897.01.T01 MTR_0002s0090 34.014 147 90 3 9 149 247 392 2.43e-19 84.3
MsG0880043897.01.T01 MTR_3g035500 34.014 147 90 3 9 149 247 392 2.43e-19 84.3
MsG0880043897.01.T01 MTR_3g034380 33.577 137 88 2 15 149 257 392 2.63e-19 84.0
MsG0880043897.01.T01 MTR_5g035240 38.298 141 75 3 18 153 255 388 4.54e-19 83.2
MsG0880043897.01.T01 MTR_5g071470 40.602 133 69 4 29 153 254 384 6.01e-19 83.2
MsG0880043897.01.T01 MTR_3g014510 34.091 132 87 0 18 149 261 392 6.54e-19 82.8
MsG0880043897.01.T01 MTR_2g062360 31.655 139 94 1 5 143 14 151 7.76e-19 82.8
MsG0880043897.01.T01 MTR_1g037610 33.858 127 83 1 24 149 266 392 1.11e-18 82.4
MsG0880043897.01.T01 MTR_2g038760 34.416 154 82 4 13 152 257 405 1.31e-18 82.0
MsG0880043897.01.T01 MTR_3g021400 36.296 135 83 3 19 152 231 363 1.48e-18 82.0
MsG0880043897.01.T01 MTR_3g021340 35.252 139 79 4 19 152 245 377 1.73e-18 81.6
MsG0880043897.01.T01 MTR_5g071800 37.333 150 84 4 12 153 237 384 2.64e-18 81.3
MsG0880043897.01.T01 MTR_3g020890 39.496 119 70 2 32 149 264 381 5.04e-18 80.5
MsG0880043897.01.T01 MTR_2g014730 37.302 126 61 2 25 149 260 368 5.13e-18 80.5
MsG0880043897.01.T01 MTR_5g071670 34.667 150 87 3 12 153 232 378 5.32e-18 80.5
MsG0880043897.01.T01 MTR_6g046440 39.130 138 80 3 18 153 244 379 5.68e-18 80.1
MsG0880043897.01.T01 MTR_3g021100 37.705 122 74 2 31 152 262 381 6.88e-18 80.1
MsG0880043897.01.T01 MTR_2g039090 31.944 144 85 4 14 149 237 375 7.33e-18 80.1
MsG0880043897.01.T01 MTR_2g039010 35.156 128 67 3 24 140 240 362 7.35e-18 79.3
MsG0880043897.01.T01 MTR_3g021380 35.971 139 78 4 19 152 232 364 9.63e-18 79.7
MsG0880043897.01.T01 MTR_3g021170 33.582 134 88 1 19 152 244 376 1.59e-17 79.0
MsG0880043897.01.T01 MTR_6g046570 34.375 160 94 4 4 153 227 385 2.12e-17 78.6
MsG0880043897.01.T01 MTR_7g089080 37.398 123 75 2 27 148 623 744 2.17e-17 78.6
MsG0880043897.01.T01 MTR_3g056200 38.462 117 68 2 29 143 280 394 2.36e-17 78.6
MsG0880043897.01.T01 MTR_5g072250 36.000 150 85 4 12 153 237 383 3.28e-17 78.2
MsG0880043897.01.T01 MTR_2g038900 32.374 139 80 3 24 152 260 394 3.40e-17 78.2
MsG0880043897.01.T01 MTR_3g014320 34.646 127 82 1 24 149 266 392 3.52e-17 77.8
MsG0880043897.01.T01 MTR_3g012090 34.507 142 85 5 18 153 265 404 4.34e-17 77.8
MsG0880043897.01.T01 MTR_2g060700 35.294 119 71 3 37 152 99 214 1.11e-16 76.6
MsG0880043897.01.T01 MTR_6g046130 35.036 137 86 2 16 152 243 376 1.22e-16 76.3
MsG0880043897.01.T01 MTR_6g047450 34.307 137 88 2 16 152 243 377 1.49e-16 76.3
MsG0880043897.01.T01 MTR_7g078790 36.957 138 81 4 5 140 237 370 1.59e-16 75.9
MsG0880043897.01.T01 MTR_3g032960 36.719 128 78 3 24 149 266 392 1.60e-16 76.3
MsG0880043897.01.T01 MTR_3g435210 29.932 147 100 2 6 149 54 200 1.97e-16 75.9
MsG0880043897.01.T01 MTR_6g052760 36.957 138 83 3 18 153 245 380 2.01e-16 75.9
MsG0880043897.01.T01 MTR_0144s0060 35.036 137 86 2 16 152 243 376 2.09e-16 75.9
MsG0880043897.01.T01 MTR_0133s0020 37.037 135 83 2 18 152 244 376 2.49e-16 75.5
MsG0880043897.01.T01 MTR_3g012310 36.567 134 79 4 23 152 273 404 2.51e-16 75.5
MsG0880043897.01.T01 MTR_6g052455 36.957 138 83 3 18 153 136 271 2.87e-16 75.5
MsG0880043897.01.T01 MTR_2g038930 31.655 139 81 3 24 152 97 231 3.24e-16 75.1
MsG0880043897.01.T01 MTR_0133s0030 36.296 135 84 2 18 152 246 378 3.59e-16 75.1
MsG0880043897.01.T01 MTR_8g445980 33.775 151 87 3 16 153 241 391 4.25e-16 74.7
MsG0880043897.01.T01 MTR_4g073840 36.296 135 80 4 19 152 283 412 7.98e-16 73.9
MsG0880043897.01.T01 MTR_3g022940 35.246 122 78 1 31 152 253 373 8.30e-16 73.9
MsG0880043897.01.T01 MTR_3g032110 34.043 141 84 3 14 149 257 393 9.69e-16 73.9
MsG0880043897.01.T01 MTR_5g035280 40.000 135 79 2 15 149 253 385 1.16e-15 73.6
MsG0880043897.01.T01 MTR_3g435720 34.375 128 81 3 24 149 266 392 1.51e-15 73.2
MsG0880043897.01.T01 MTR_3g014390 33.333 126 84 0 24 149 265 390 1.72e-15 73.2
MsG0880043897.01.T01 MTR_6g046550 35.484 124 77 2 16 139 223 343 1.77e-15 73.2
MsG0880043897.01.T01 MTR_3g012250 34.848 132 78 4 23 151 282 408 2.61e-15 72.4
MsG0880043897.01.T01 MTR_3g035810 34.328 134 83 2 19 152 230 358 2.92e-15 72.4
MsG0880043897.01.T01 MTR_3g012050 32.593 135 83 4 21 152 260 389 3.10e-15 72.4
MsG0880043897.01.T01 MTR_0511s0020 36.232 138 84 3 18 153 245 380 3.19e-15 72.4
MsG0880043897.01.T01 MTR_1g078190 39.516 124 70 3 23 143 269 390 3.29e-15 72.4
MsG0880043897.01.T01 MTR_3g032800 34.167 120 76 2 32 149 274 392 3.35e-15 72.4
MsG0880043897.01.T01 MTR_8g106550 31.061 132 71 2 18 149 237 348 3.91e-15 72.0
MsG0880043897.01.T01 MTR_3g032760 35.833 120 74 3 32 149 274 392 4.65e-15 72.0
MsG0880043897.01.T01 MTR_6g046930 34.074 135 87 2 18 152 243 375 5.08e-15 71.6
MsG0880043897.01.T01 MTR_6g046480 34.109 129 82 2 24 152 252 377 5.58e-15 71.6
MsG0880043897.01.T01 MTR_3g056320 38.393 112 67 1 32 143 291 400 5.97e-15 71.6
MsG0880043897.01.T01 MTR_3g056300 36.066 122 74 2 24 143 202 321 6.27e-15 71.2
MsG0880043897.01.T01 MTR_3g012240 37.903 124 72 4 24 144 320 441 6.50e-15 71.2
MsG0880043897.01.T01 MTR_3g055830 34.532 139 85 4 19 153 265 401 8.51e-15 71.2
MsG0880043897.01.T01 MTR_3g056590 36.296 135 78 5 23 152 274 405 8.76e-15 70.9
MsG0880043897.01.T01 MTR_3g032150 32.812 128 83 2 24 149 264 390 9.59e-15 70.9
MsG0880043897.01.T01 MTR_6g084550 31.852 135 70 3 18 149 262 377 1.14e-14 70.9
MsG0880043897.01.T01 MTR_1g037730 36.607 112 69 1 14 125 262 371 1.25e-14 70.1
MsG0880043897.01.T01 MTR_3g030980 33.071 127 82 2 25 149 267 392 1.73e-14 70.1
MsG0880043897.01.T01 MTR_3g030960 33.071 127 82 2 25 149 267 392 1.74e-14 70.1
MsG0880043897.01.T01 MTR_3g056190 36.290 124 74 3 32 152 290 411 1.93e-14 70.1
MsG0880043897.01.T01 MTR_3g014360 32.283 127 70 2 24 149 266 377 1.94e-14 70.1
MsG0880043897.01.T01 MTR_3g017620 29.801 151 101 2 1 149 210 357 1.97e-14 70.1
MsG0880043897.01.T01 MTR_3g056635 37.600 125 73 3 23 144 274 396 2.15e-14 69.7
MsG0880043897.01.T01 MTR_3g055930 35.246 122 71 3 29 144 289 408 2.22e-14 69.7
MsG0880043897.01.T01 MTR_2g063777 32.558 129 82 3 24 149 266 392 2.42e-14 69.7
MsG0880043897.01.T01 MTR_3g032370 32.812 128 83 2 24 149 264 390 3.43e-14 69.3
MsG0880043897.01.T01 MTR_3g056380 36.207 116 71 2 29 143 279 392 4.35e-14 68.9
MsG0880043897.01.T01 MTR_3g435220 36.449 107 68 0 34 140 240 346 4.86e-14 68.9
MsG0880043897.01.T01 MTR_3g033380 32.500 120 78 2 32 149 278 396 6.71e-14 68.6
MsG0880043897.01.T01 MTR_3g056360 34.677 124 76 3 32 152 259 380 7.85e-14 68.2
MsG0880043897.01.T01 MTR_3g056410 34.677 124 76 3 32 152 250 371 9.15e-14 68.2
MsG0880043897.01.T01 MTR_8g011320 36.792 106 52 1 14 119 214 304 9.16e-14 68.2
MsG0880043897.01.T01 MTR_3g032340 33.333 120 77 2 32 149 279 397 9.77e-14 68.2
MsG0880043897.01.T01 MTR_3g011620 31.897 116 79 0 34 149 281 396 1.26e-13 67.8
MsG0880043897.01.T01 MTR_3g069210 37.931 116 67 3 32 144 272 385 1.46e-13 67.4
MsG0880043897.01.T01 MTR_1g045960 31.387 137 90 2 18 150 229 365 1.68e-13 67.4
MsG0880043897.01.T01 MTR_3g031940 32.500 120 78 2 32 149 278 396 1.93e-13 67.4
MsG0880043897.01.T01 MTR_3g056310 33.577 137 86 3 19 152 272 406 1.97e-13 67.0
MsG0880043897.01.T01 MTR_8g446950 29.054 148 95 2 12 149 271 418 2.05e-13 67.0
MsG0880043897.01.T01 MTR_3g055870 34.532 139 85 4 19 153 262 398 2.05e-13 67.0
MsG0880043897.01.T01 MTR_1g016210 37.692 130 65 5 32 152 284 406 2.09e-13 67.0
MsG0880043897.01.T01 MTR_3g455940 37.931 116 66 3 32 144 175 287 2.23e-13 67.0
MsG0880043897.01.T01 MTR_3g032500 32.500 120 78 2 32 149 278 396 2.25e-13 67.0
MsG0880043897.01.T01 MTR_3g011460 34.677 124 74 4 24 143 275 395 3.28e-13 66.6
MsG0880043897.01.T01 MTR_3g012060 34.677 124 72 4 23 143 273 390 3.44e-13 66.6
MsG0880043897.01.T01 MTR_3g056585 39.286 112 62 3 32 140 274 382 3.60e-13 66.2
MsG0880043897.01.T01 MTR_3g032200 31.667 120 79 2 32 149 278 396 3.65e-13 66.2
MsG0880043897.01.T01 MTR_3g012270 34.646 127 75 4 29 152 288 409 4.20e-13 66.2
MsG0880043897.01.T01 MTR_3g033240 33.333 141 78 5 18 143 247 386 5.14e-13 65.9
MsG0880043897.01.T01 MTR_0230s0010 38.462 117 68 3 18 132 245 359 5.40e-13 65.9
MsG0880043897.01.T01 MTR_5g035230 33.981 103 66 2 47 149 263 363 1.17e-12 64.7
MsG0880043897.01.T01 MTR_3g056620 34.211 114 72 2 28 140 286 397 1.30e-12 64.7
MsG0880043897.01.T01 MTR_3g033130 33.333 123 73 3 32 149 259 377 1.82e-12 64.3
MsG0880043897.01.T01 MTR_7g091090 36.842 95 59 1 49 143 153 246 1.99e-12 63.9
MsG0880043897.01.T01 MTR_3g020620 31.783 129 81 2 28 149 415 543 2.71e-12 63.9
MsG0880043897.01.T01 MTR_6g046620 32.090 134 69 1 16 149 219 330 3.04e-12 63.9
MsG0880043897.01.T01 MTR_5g039570 35.537 121 68 3 12 124 212 330 3.75e-12 63.5
MsG0880043897.01.T01 MTR_5g027910 31.405 121 77 3 25 143 263 379 7.26e-12 62.8
MsG0880043897.01.T01 MTR_2g038510 31.293 147 90 3 19 156 259 403 8.37e-12 62.4
MsG0880043897.01.T01 MTR_5g021080 32.090 134 87 3 19 151 258 388 9.67e-12 62.4
MsG0880043897.01.T01 MTR_3g014470 32.283 127 51 3 24 149 265 357 3.62e-11 60.5
MsG0880043897.01.T01 MTR_5g037590 32.203 118 80 0 32 149 242 359 4.10e-11 60.5
MsG0880043897.01.T01 MTR_5g027900 32.143 112 73 2 33 143 266 375 7.92e-11 59.7
MsG0880043897.01.T01 MTR_3g011280 34.884 129 76 5 29 152 248 373 9.39e-11 59.3
MsG0880043897.01.T01 MTR_3g055720 35.714 126 75 4 32 153 281 404 9.76e-11 59.3
MsG0880043897.01.T01 MTR_3g011280 34.884 129 76 5 29 152 280 405 9.79e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043897.01.T01 AT3G14460 34.783 138 85 3 16 149 253 389 1.57e-18 82.0
MsG0880043897.01.T01 AT3G50950 39.837 123 69 4 24 143 252 372 2.26e-18 81.3
MsG0880043897.01.T01 AT3G50950 39.837 123 69 4 24 143 252 372 2.26e-18 81.3
MsG0880043897.01.T01 AT3G07040 34.641 153 92 4 2 152 253 399 3.07e-18 80.9
MsG0880043897.01.T01 AT3G46530 36.364 121 73 3 29 149 267 383 7.47e-17 77.0
MsG0880043897.01.T01 AT3G14470 32.800 125 81 2 18 140 261 384 3.49e-16 75.1
MsG0880043897.01.T01 AT3G14470 32.800 125 81 2 18 140 261 384 3.49e-16 75.1
MsG0880043897.01.T01 AT5G43730 30.469 128 85 3 22 149 243 366 6.69e-12 62.8
MsG0880043897.01.T01 AT5G43730 30.469 128 85 3 22 149 243 366 6.69e-12 62.8
MsG0880043897.01.T01 AT5G43730 30.469 128 85 3 22 149 243 366 6.69e-12 62.8
MsG0880043897.01.T01 AT5G43730 30.469 128 85 3 22 149 243 366 6.69e-12 62.8
MsG0880043897.01.T01 AT5G43730 30.469 128 85 3 22 149 243 366 6.69e-12 62.8
MsG0880043897.01.T01 AT1G50180 30.496 141 92 3 15 152 251 388 8.60e-12 62.4
MsG0880043897.01.T01 AT3G46710 32.468 154 96 4 7 155 239 389 1.00e-11 62.4
MsG0880043897.01.T01 AT1G52660 29.008 131 89 3 19 149 230 356 1.64e-11 61.6
MsG0880043897.01.T01 AT3G15700 29.008 131 89 3 19 149 230 356 1.69e-11 61.2
MsG0880043897.01.T01 AT3G15700 29.008 131 89 3 19 149 230 356 1.73e-11 61.2
MsG0880043897.01.T01 AT1G52660 29.008 131 89 3 19 149 230 356 1.82e-11 61.2
MsG0880043897.01.T01 AT1G27170 32.353 136 82 5 18 149 276 405 1.83e-11 61.6
MsG0880043897.01.T01 AT1G27170 32.353 136 82 5 18 149 276 405 1.89e-11 61.6
MsG0880043897.01.T01 AT5G35450 30.769 130 84 4 21 149 253 377 3.26e-11 60.8
MsG0880043897.01.T01 AT5G35450 30.769 130 84 4 21 149 253 377 3.26e-11 60.8
MsG0880043897.01.T01 AT3G46730 34.314 102 65 2 48 149 285 384 8.85e-11 59.7

Find 31 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAGGAATGTTCTTCATTT+AGG 0.230023 8:+32320341 None:intergenic
TAAGCGACCAATACGGTAAA+TGG 0.275522 8:+32320213 None:intergenic
AGTCAAAAGGAAATAATATT+AGG 0.328422 8:-32320579 MsG0880043897.01.T01:CDS
CGAATGAGAGTTATTTATCT+TGG 0.367428 8:-32320483 MsG0880043897.01.T01:CDS
AGAAGGATTGGTTAAAGTTA+AGG 0.376237 8:-32320171 MsG0880043897.01.T01:CDS
AAACTCAGTGAAAACATTGA+TGG 0.381698 8:-32320538 MsG0880043897.01.T01:CDS
ACCTAAATGAAGAACATTCC+TGG 0.382737 8:-32320342 MsG0880043897.01.T01:CDS
CCCCTCTCCATTTACCGTAT+TGG 0.407169 8:-32320220 MsG0880043897.01.T01:CDS
AAAGAGATATTTACTTGTGT+TGG 0.455014 8:-32320515 MsG0880043897.01.T01:CDS
CGTTTGAAGGGTGCGGCAAA+AGG 0.465288 8:-32320445 MsG0880043897.01.T01:CDS
CCGGTCTCAGCTCATAACTT+TGG 0.478394 8:-32320368 MsG0880043897.01.T01:CDS
CTAAGAAGATGGAGAAGGAT+TGG 0.479724 8:-32320183 MsG0880043897.01.T01:CDS
CTTAATGTATACTAAGAAGA+TGG 0.510834 8:-32320194 MsG0880043897.01.T01:CDS
AAAAGGAAATAATATTAGGC+TGG 0.516053 8:-32320575 MsG0880043897.01.T01:CDS
TAATTTGACGAAACGTTTGA+AGG 0.518145 8:-32320458 MsG0880043897.01.T01:CDS
AACAACAAGAAGCAAGAAAG+TGG 0.532400 8:-32320407 MsG0880043897.01.T01:CDS
CCAAAGTTATGAGCTGAGAC+CGG 0.546706 8:+32320368 None:intergenic
ACCAATACGGTAAATGGAGA+GGG 0.557017 8:+32320219 None:intergenic
AGAACTCGAGAATCAAAACT+TGG 0.557472 8:-32320284 MsG0880043897.01.T01:CDS
TATGGATACTAATATTGTGT+TGG 0.560056 8:-32320608 MsG0880043897.01.T01:CDS
TTGCACGATCTCCTTGCCGA+TGG 0.560084 8:+32320258 None:intergenic
AAATAAACAAAACATTCTCC+AGG 0.562859 8:+32320324 None:intergenic
AATCAAAACTTGGTGTCCAT+CGG 0.567333 8:-32320274 MsG0880043897.01.T01:CDS
AATTTGACGAAACGTTTGAA+GGG 0.568176 8:-32320457 MsG0880043897.01.T01:CDS
GACGAAACGTTTGAAGGGTG+CGG 0.579694 8:-32320452 MsG0880043897.01.T01:CDS
GTGTTGGAACATGAGTCAAA+AGG 0.594023 8:-32320592 MsG0880043897.01.T01:CDS
AAACTTGGTGTCCATCGGCA+AGG 0.620777 8:-32320269 MsG0880043897.01.T01:CDS
TATACATTAAGCGACCAATA+CGG 0.621576 8:+32320206 None:intergenic
GTATACTAAGAAGATGGAGA+AGG 0.624179 8:-32320188 MsG0880043897.01.T01:CDS
GACCAATACGGTAAATGGAG+AGG 0.638427 8:+32320218 None:intergenic
CCAATACGGTAAATGGAGAG+GGG 0.703499 8:+32320220 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTCAAAAGGAAATAATATT+AGG - Chr8:32320184-32320203 MsG0880043897.01.T01:CDS 20.0%
! AAAAGGAAATAATATTAGGC+TGG - Chr8:32320188-32320207 MsG0880043897.01.T01:CDS 25.0%
! AAAGAGATATTTACTTGTGT+TGG - Chr8:32320248-32320267 MsG0880043897.01.T01:CDS 25.0%
! AAATAAACAAAACATTCTCC+AGG + Chr8:32320442-32320461 None:intergenic 25.0%
! CTTAATGTATACTAAGAAGA+TGG - Chr8:32320569-32320588 MsG0880043897.01.T01:CDS 25.0%
AAACTCAGTGAAAACATTGA+TGG - Chr8:32320225-32320244 MsG0880043897.01.T01:CDS 30.0%
AATTTGACGAAACGTTTGAA+GGG - Chr8:32320306-32320325 MsG0880043897.01.T01:CDS 30.0%
CGAATGAGAGTTATTTATCT+TGG - Chr8:32320280-32320299 MsG0880043897.01.T01:CDS 30.0%
TAATTTGACGAAACGTTTGA+AGG - Chr8:32320305-32320324 MsG0880043897.01.T01:CDS 30.0%
TATACATTAAGCGACCAATA+CGG + Chr8:32320560-32320579 None:intergenic 30.0%
! AATGTTTTCACTGAGTTTTG+AGG + Chr8:32320223-32320242 None:intergenic 30.0%
!! AGAAGGATTGGTTAAAGTTA+AGG - Chr8:32320592-32320611 MsG0880043897.01.T01:CDS 30.0%
AACAACAAGAAGCAAGAAAG+TGG - Chr8:32320356-32320375 MsG0880043897.01.T01:CDS 35.0%
ACCTAAATGAAGAACATTCC+TGG - Chr8:32320421-32320440 MsG0880043897.01.T01:CDS 35.0%
AGAACTCGAGAATCAAAACT+TGG - Chr8:32320479-32320498 MsG0880043897.01.T01:CDS 35.0%
AGATCGTGCAAAAATGTAAC+GGG - Chr8:32320517-32320536 MsG0880043897.01.T01:CDS 35.0%
GAGATCGTGCAAAAATGTAA+CGG - Chr8:32320516-32320535 MsG0880043897.01.T01:CDS 35.0%
GTATACTAAGAAGATGGAGA+AGG - Chr8:32320575-32320594 MsG0880043897.01.T01:CDS 35.0%
TCCAGGAATGTTCTTCATTT+AGG + Chr8:32320425-32320444 None:intergenic 35.0%
TGGCAAAGATATCGAAAAAC+CGG - Chr8:32320376-32320395 MsG0880043897.01.T01:CDS 35.0%
!! AATCAAAACTTGGTGTCCAT+CGG - Chr8:32320489-32320508 MsG0880043897.01.T01:CDS 35.0%
ACCAATACGGTAAATGGAGA+GGG + Chr8:32320547-32320566 None:intergenic 40.0%
CTAAGAAGATGGAGAAGGAT+TGG - Chr8:32320580-32320599 MsG0880043897.01.T01:CDS 40.0%
GTGTTGGAACATGAGTCAAA+AGG - Chr8:32320171-32320190 MsG0880043897.01.T01:CDS 40.0%
TAAGCGACCAATACGGTAAA+TGG + Chr8:32320553-32320572 None:intergenic 40.0%
CCAAAGTTATGAGCTGAGAC+CGG + Chr8:32320398-32320417 None:intergenic 45.0%
CCAATACGGTAAATGGAGAG+GGG + Chr8:32320546-32320565 None:intergenic 45.0%
GACCAATACGGTAAATGGAG+AGG + Chr8:32320548-32320567 None:intergenic 45.0%
CCCCTCTCCATTTACCGTAT+TGG - Chr8:32320543-32320562 MsG0880043897.01.T01:CDS 50.0%
CCGGTCTCAGCTCATAACTT+TGG - Chr8:32320395-32320414 MsG0880043897.01.T01:CDS 50.0%
GACGAAACGTTTGAAGGGTG+CGG - Chr8:32320311-32320330 MsG0880043897.01.T01:CDS 50.0%
!! AAACTTGGTGTCCATCGGCA+AGG - Chr8:32320494-32320513 MsG0880043897.01.T01:CDS 50.0%
TTGCACGATCTCCTTGCCGA+TGG + Chr8:32320508-32320527 None:intergenic 55.0%
! CGTTTGAAGGGTGCGGCAAA+AGG - Chr8:32320318-32320337 MsG0880043897.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 32320156 32320629 32320156 ID=MsG0880043897.01;Name=MsG0880043897.01
Chr8 mRNA 32320156 32320629 32320156 ID=MsG0880043897.01.T01;Parent=MsG0880043897.01;Name=MsG0880043897.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|157
Chr8 exon 32320156 32320629 32320156 ID=MsG0880043897.01.T01:exon:7841;Parent=MsG0880043897.01.T01
Chr8 CDS 32320156 32320629 32320156 ID=MsG0880043897.01.T01:cds;Parent=MsG0880043897.01.T01
Gene Sequence

>MsG0880043897.01.T01

ATGGATACTAATATTGTGTTGGAACATGAGTCAAAAGGAAATAATATTAGGCTGGAAGACGTATCCTCAAAACTCAGTGAAAACATTGATGGAAAGAGATATTTACTTGTGTTGGATGATGTGTCGAATGAGAGTTATTTATCTTGGTCTAATTTGACGAAACGTTTGAAGGGTGCGGCAAAAGGAAGTAAAATCATAATAACAACAAGAAGCAAGAAAGTGGCAAAGATATCGAAAAACCGGTCTCAGCTCATAACTTTGGAGAACCTAAATGAAGAACATTCCTGGAGAATGTTTTGTTTATTTGCTTTTAATGATGAAACAGAACTCGAGAATCAAAACTTGGTGTCCATCGGCAAGGAGATCGTGCAAAAATGTAACGGGATACCCCTCTCCATTTACCGTATTGGTCGCTTAATGTATACTAAGAAGATGGAGAAGGATTGGTTAAAGTTAAGGATCAAGATCTTGTAA

Protein sequence

>MsG0880043897.01.T01

MDTNIVLEHESKGNNIRLEDVSSKLSENIDGKRYLLVLDDVSNESYLSWSNLTKRLKGAAKGSKIIITTRSKKVAKISKNRSQLITLENLNEEHSWRMFCLFAFNDETELENQNLVSIGKEIVQKCNGIPLSIYRIGRLMYTKKMEKDWLKLRIKIL*