AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043946.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043946.01.T01 MTR_8g045463 89.261 568 33 3 1 566 1 542 0.0 988
MsG0880043946.01.T01 MTR_8g045470 89.261 568 33 3 1 566 1 542 0.0 988
MsG0880043946.01.T01 MTR_8g045440 85.614 570 46 4 7 566 7 550 0.0 940
MsG0880043946.01.T01 MTR_8g041740 83.304 569 60 3 7 566 7 549 0.0 920
MsG0880043946.01.T01 MTR_8g045440 87.707 423 26 2 7 429 7 403 0.0 719
MsG0880043946.01.T01 MTR_5g069620 70.588 85 25 0 59 143 9 93 7.99e-34 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043946.01.T01 AT3G21060 63.738 535 163 5 7 541 7 510 0.0 650

Find 146 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATAATTGATGCTGAATT+AGG 0.190555 8:+33222400 MsG0880043946.01.T01:CDS
TTCATATCCTTGCAGGTAAA+AGG 0.197161 8:+33224435 MsG0880043946.01.T01:intron
TGAGTGGCATAGTTTATATC+TGG 0.203041 8:+33224227 MsG0880043946.01.T01:CDS
ATGATGGAAGCTGTGTTATT+TGG 0.213605 8:+33223270 MsG0880043946.01.T01:CDS
GCTACCACTTCTTCCGAAAA+TGG 0.216044 8:-33224648 None:intergenic
CTCTCCATCACCACTGAAAC+AGG 0.282312 8:-33224053 None:intergenic
TAAGGAAGCCCTTATTGATT+TGG 0.332476 8:+33224165 MsG0880043946.01.T01:CDS
CCAGTTCTCAATATACTCTT+TGG 0.339039 8:-33224251 None:intergenic
AAGAACCAGAAGTAAATCTT+TGG 0.340333 8:+33225031 MsG0880043946.01.T01:CDS
GCTGCATGTTTCAGTAAGTA+TGG 0.351160 8:+33223674 MsG0880043946.01.T01:CDS
TCCTCAATCTCTATGAAATC+AGG 0.356314 8:-33224286 None:intergenic
GGTGATGGAGAGTGGGTTGT+TGG 0.362512 8:+33224064 MsG0880043946.01.T01:CDS
AAGAACCTCGGTGATCTAAA+TGG 0.368839 8:+33223941 MsG0880043946.01.T01:CDS
AGAAGTGATAGAAGAGTATC+TGG 0.372541 8:+33221028 MsG0880043946.01.T01:CDS
AGATACTCTTCTATCACTTC+TGG 0.373017 8:-33221026 None:intergenic
GATGCCATGCCAAATCAATA+AGG 0.373267 8:-33224174 None:intergenic
TTTACTAGCTCGTCTTCATC+CGG 0.374685 8:+33223475 MsG0880043946.01.T01:CDS
GAACCCTTGTTGCGTGAGGC+AGG 0.376223 8:-33223623 None:intergenic
TGATGGAAGCTGTGTTATTT+GGG 0.380302 8:+33223271 MsG0880043946.01.T01:CDS
ACCCTTTGACCAACAAATAC+TGG 0.382685 8:-33223354 None:intergenic
AGTGCTCTAACTTCATCTTT+TGG 0.386517 8:-33223905 None:intergenic
GATTAACACCCTTGTAGTTA+TGG 0.387484 8:+33222378 MsG0880043946.01.T01:CDS
CTCCCATTACCAGTATTTGT+TGG 0.394408 8:+33223345 MsG0880043946.01.T01:CDS
AAAGAAACAGACAGAACAAT+TGG 0.396217 8:-33224205 None:intergenic
TTAGATAGTTCTTCAAAGAT+TGG 0.397773 8:+33224603 MsG0880043946.01.T01:CDS
GGCGTGACATTACCTTCAAC+TGG 0.399826 8:-33224702 None:intergenic
AACAACCTGTCATCCTGTTC+AGG 0.401836 8:-33224582 None:intergenic
ACCAGTATTTGTTGGTCAAA+GGG 0.407944 8:+33223353 MsG0880043946.01.T01:CDS
CTTGTAATTGACATTAAAGA+TGG 0.408889 8:+33223734 MsG0880043946.01.T01:CDS
CGTGCCATGGTTCCTATCTC+TGG 0.411940 8:+33223764 MsG0880043946.01.T01:CDS
CATTCCCGATGTTCCTGAAC+AGG 0.412421 8:+33224569 MsG0880043946.01.T01:CDS
CACCAAGCAGAAAGATGGTT+TGG 0.414247 8:-33223504 None:intergenic
CTCCAAACCATCTTTCTGCT+TGG 0.422817 8:+33223502 MsG0880043946.01.T01:CDS
GACCAACAAATACTGGTAAT+GGG 0.423412 8:-33223347 None:intergenic
TGACCAACAAATACTGGTAA+TGG 0.426028 8:-33223348 None:intergenic
GGGCTTCCTTAGGCCCTTCA+AGG 0.426153 8:-33224153 None:intergenic
ATCAACCAAAGATTTACTTC+TGG 0.435338 8:-33225036 None:intergenic
TCTGGTGGTGTTCCTATCTC+TGG 0.435501 8:+33223782 MsG0880043946.01.T01:CDS
TTGTTGCGTGAGGCAGGGTT+AGG 0.435641 8:-33223617 None:intergenic
TCCTGATTTCATAGAGATTG+AGG 0.436594 8:+33224285 MsG0880043946.01.T01:CDS
ACATCGGGAATGGGAGATAC+TGG 0.437003 8:-33224558 None:intergenic
ACTACTGAACCACCAGAGAT+AGG 0.439225 8:-33223794 None:intergenic
TGAGGAAAATGAGGAGTATG+TGG 0.443627 8:+33224303 MsG0880043946.01.T01:CDS
TTACTAGCTCGTCTTCATCC+GGG 0.444533 8:+33223476 MsG0880043946.01.T01:CDS
TCACGCAACAAGGGTTCTGC+TGG 0.445794 8:+33223629 MsG0880043946.01.T01:CDS
GGGATGTCTTGAGTGGTAAA+AGG 0.450323 8:+33223423 MsG0880043946.01.T01:CDS
ACTCAAATGATCGAGTAATC+AGG 0.452188 8:+33223861 MsG0880043946.01.T01:CDS
CATAGAGATTGAGGAAAATG+AGG 0.453993 8:+33224294 MsG0880043946.01.T01:CDS
GATGAAGACGAGCTAGTAAA+GGG 0.459913 8:-33223472 None:intergenic
CAACACGAATTAAAAGAAAT+CGG 0.460287 8:+33224964 MsG0880043946.01.T01:CDS
CCAAAGAGTATATTGAGAAC+TGG 0.462193 8:+33224251 MsG0880043946.01.T01:CDS
CAAGGGTGTTAATCTGCAAT+TGG 0.462311 8:-33222369 None:intergenic
GAGGCCAACACCTTCTCTGA+TGG 0.464958 8:-33224990 None:intergenic
TACCAGTATTTGTTGGTCAA+AGG 0.467812 8:+33223352 MsG0880043946.01.T01:CDS
GATGGAGAGTGGGTTGTTGG+TGG 0.468537 8:+33224067 MsG0880043946.01.T01:CDS
GTTCTGTCTGTTTCTTTGAG+TGG 0.470498 8:+33224211 MsG0880043946.01.T01:CDS
CTGTTCAGGAACATCGGGAA+TGG 0.471322 8:-33224568 None:intergenic
TTATTTGGGATTTAGAAGTC+AGG 0.472102 8:+33223285 MsG0880043946.01.T01:CDS
TCACATACATTATCAGTGTC+AGG 0.473182 8:-33224352 None:intergenic
GAGAGCACAAGATTTACATA+TGG 0.478073 8:+33224104 MsG0880043946.01.T01:CDS
TCGGAAGAAGTGGTAGCAAA+TGG 0.478453 8:+33224654 MsG0880043946.01.T01:CDS
GAATCAGCTGGCTGCAATGA+TGG 0.479058 8:+33223254 MsG0880043946.01.T01:intron
CATCTTGTGAAAATCCTTGA+AGG 0.482006 8:+33224139 MsG0880043946.01.T01:CDS
GTATGGAAACCTGGTTTATG+TGG 0.490370 8:+33223691 MsG0880043946.01.T01:CDS
TGATGATTTGTCAGATCTTG+AGG 0.492395 8:-33225009 None:intergenic
GAGTGGCATAGTTTATATCT+GGG 0.492751 8:+33224228 MsG0880043946.01.T01:CDS
TAGAAGAGTATCTGGAACAT+TGG 0.493332 8:+33221036 MsG0880043946.01.T01:CDS
ATAGGAACACCACCAGAGAT+AGG 0.493786 8:-33223776 None:intergenic
TCATATCCTTGCAGGTAAAA+GGG 0.494099 8:+33224436 MsG0880043946.01.T01:intron
CAATTATAGCCATAACTACA+AGG 0.497776 8:-33222387 None:intergenic
TCATCCTGTTCAGGAACATC+GGG 0.498010 8:-33224573 None:intergenic
ATTTACATATGGGATAGAAC+TGG 0.499480 8:+33224115 MsG0880043946.01.T01:CDS
TGTTCAGGAACATCGGGAAT+GGG 0.501740 8:-33224567 None:intergenic
GACAGAACAATTGGACGTAC+AGG 0.503056 8:-33224196 None:intergenic
GTCAACAATCATCGGAGTAC+AGG 0.505887 8:-33223537 None:intergenic
ATGCCATGCCAAATCAATAA+GGG 0.506231 8:-33224173 None:intergenic
GGATGAAGACGAGCTAGTAA+AGG 0.525546 8:-33223473 None:intergenic
AAATCAATAAGGGCTTCCTT+AGG 0.525647 8:-33224163 None:intergenic
ATATCAGAGTCGCAGAAAGC+AGG 0.527495 8:-33224510 None:intergenic
GCACCCTGTTTCAGTGGTGA+TGG 0.531362 8:+33224049 MsG0880043946.01.T01:CDS
GTTTCAGTGGTGATGGAGAG+TGG 0.534496 8:+33224056 MsG0880043946.01.T01:CDS
TTTCAGTAAGTATGGAAACC+TGG 0.536688 8:+33223682 MsG0880043946.01.T01:CDS
CATGCCTCAAGTCCAGTTGA+AGG 0.538226 8:+33224690 MsG0880043946.01.T01:CDS
GTCATCCTGTTCAGGAACAT+CGG 0.540330 8:-33224574 None:intergenic
ATGCAATCACGAAAGTGCAC+TGG 0.552939 8:+33224023 MsG0880043946.01.T01:CDS
AGAGCACAAGATTTACATAT+GGG 0.555323 8:+33224105 MsG0880043946.01.T01:CDS
GAAAATCCTTGAAGGGCCTA+AGG 0.556664 8:+33224147 MsG0880043946.01.T01:CDS
ATGTTCCTGAACAGGATGAC+AGG 0.559029 8:+33224577 MsG0880043946.01.T01:CDS
TAACCCTGCCTCACGCAACA+AGG 0.560146 8:+33223619 MsG0880043946.01.T01:CDS
ATTACCTTCAACTGGACTTG+AGG 0.561076 8:-33224694 None:intergenic
AAGCCCTTATTGATTTGGCA+TGG 0.561694 8:+33224170 MsG0880043946.01.T01:CDS
ATTGGTGACAGCAATAACTC+TGG 0.566084 8:+33224621 MsG0880043946.01.T01:CDS
TACTAGCTCGTCTTCATCCG+GGG 0.567258 8:+33223477 MsG0880043946.01.T01:CDS
GTGTTTAAGTCAACAATCAT+CGG 0.569428 8:-33223545 None:intergenic
AACCCTTGTTGCGTGAGGCA+GGG 0.570091 8:-33223622 None:intergenic
AGCAGAACCCTTGTTGCGTG+AGG 0.573099 8:-33223627 None:intergenic
GGACACACCAAGCAGAAAGA+TGG 0.574387 8:-33223509 None:intergenic
AGATGGCGAGGTGCGTGCCA+TGG 0.575964 8:+33223751 MsG0880043946.01.T01:CDS
TTTCAGTGGTGATGGAGAGT+GGG 0.579791 8:+33224057 MsG0880043946.01.T01:CDS
TGGAAGGCACCCTGTTTCAG+TGG 0.579970 8:+33224043 MsG0880043946.01.T01:CDS
AACATTGTATTCAGCATGAA+CGG 0.580560 8:+33223821 MsG0880043946.01.T01:CDS
CAAGCAGAAAGATGGTTTGG+AGG 0.587501 8:-33223501 None:intergenic
TCGAGTTTCCCACATAAACC+AGG 0.588345 8:-33223700 None:intergenic
GAGGCAGGGTTAGGTCCACT+TGG 0.588654 8:-33223608 None:intergenic
TATTTGGGATTTAGAAGTCA+GGG 0.588669 8:+33223286 MsG0880043946.01.T01:CDS
AAATGGTGTTGAGAAGTTGA+AGG 0.591187 8:+33223958 MsG0880043946.01.T01:CDS
CATGTTGAAGATCCGTTGCA+AGG 0.592417 8:+33220996 MsG0880043946.01.T01:CDS
GTTGGTGGTTCTGCTAGCAA+AGG 0.593351 8:+33224082 MsG0880043946.01.T01:CDS
TAGATAACATAGCTCTTCCT+CGG 0.597086 8:-33224535 None:intergenic
ATCTTGTGAAAATCCTTGAA+GGG 0.602213 8:+33224140 MsG0880043946.01.T01:CDS
AACCCTGCCTCACGCAACAA+GGG 0.603497 8:+33223620 MsG0880043946.01.T01:CDS
ATCATTTACAGATGGTGCTG+TGG 0.604713 8:+33224941 MsG0880043946.01.T01:intron
ACATGCAGCAGTAGGTGTGA+AGG 0.605285 8:-33223660 None:intergenic
TATGGAAACCTGGTTTATGT+GGG 0.609917 8:+33223692 MsG0880043946.01.T01:CDS
GTCTGATGTCAATGAAGATG+AGG 0.610127 8:+33224458 MsG0880043946.01.T01:CDS
AAATCGGAAACCATCAGAGA+AGG 0.612594 8:+33224980 MsG0880043946.01.T01:CDS
TACCACTCAAGACATCCCAC+AGG 0.615382 8:-33223418 None:intergenic
GGTGGTGTTCCTATCTCTGG+TGG 0.617166 8:+33223785 MsG0880043946.01.T01:CDS
TGACATTATAACAGTCGAGA+AGG 0.617183 8:+33224485 MsG0880043946.01.T01:CDS
GCCATGGTTCCTATCTCTGG+TGG 0.621068 8:+33223767 MsG0880043946.01.T01:CDS
GTTTATGTGGGAAACTCGAA+AGG 0.626649 8:+33223704 MsG0880043946.01.T01:CDS
GAAACCATCAGAGAAGGTGT+TGG 0.629572 8:+33224986 MsG0880043946.01.T01:CDS
AGACAAGTCATTATCCCTGT+GGG 0.631106 8:+33223403 MsG0880043946.01.T01:CDS
TGATTGCATCTTGAAACTCA+CGG 0.633891 8:-33224009 None:intergenic
AGTATTTGTTGGTCAAAGGG+TGG 0.636013 8:+33223356 MsG0880043946.01.T01:CDS
TGCGTTGCTTTCAATCGTCG+TGG 0.636138 8:+33221068 MsG0880043946.01.T01:CDS
ATTTGGGATTTAGAAGTCAG+GGG 0.637096 8:+33223287 MsG0880043946.01.T01:CDS
TCTGGAAAATCACCTTGCAA+CGG 0.637632 8:-33221008 None:intergenic
TCTCCATCACCACTGAAACA+GGG 0.640101 8:-33224052 None:intergenic
TTACTGAAACATGCAGCAGT+AGG 0.640206 8:-33223668 None:intergenic
AATTGACATTAAAGATGGCG+AGG 0.645296 8:+33223739 MsG0880043946.01.T01:CDS
TCTGTCTCTGACAAACCAAG+TGG 0.648181 8:+33223593 MsG0880043946.01.T01:CDS
AAAGATGGTTTGGAGGACCC+CGG 0.656183 8:-33223494 None:intergenic
CTGCGACTCTGATATGTCCG+AGG 0.656990 8:+33224518 MsG0880043946.01.T01:CDS
TGCAGCAGTAGGTGTGAAGG+AGG 0.657772 8:-33223657 None:intergenic
ACCACCAGAGATAGGAACCA+TGG 0.658159 8:-33223768 None:intergenic
CAGACAAGTCATTATCCCTG+TGG 0.668536 8:+33223402 MsG0880043946.01.T01:CDS
ACCACTCAAGACATCCCACA+GGG 0.671936 8:-33223417 None:intergenic
GTTGAGAAGTTGAAGGCTGT+AGG 0.680893 8:+33223965 MsG0880043946.01.T01:CDS
AATTATAGCCATAACTACAA+GGG 0.683305 8:-33222386 None:intergenic
AATCACGAAAGTGCACTGGA+AGG 0.694138 8:+33224027 MsG0880043946.01.T01:CDS
TCCCTGTGGGATGTCTTGAG+TGG 0.699580 8:+33223416 MsG0880043946.01.T01:CDS
ATGAAGACGAGCTAGTAAAG+GGG 0.710400 8:-33223471 None:intergenic
GTTGAACTGAACAAGAACCT+CGG 0.715288 8:+33223929 MsG0880043946.01.T01:CDS
ATCATCGGAGTACAGGACAG+AGG 0.728617 8:-33223530 None:intergenic
CAACACCATTTAGATCACCG+AGG 0.738329 8:-33223946 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTTATGTAAAATTTAAA+GGG + Chr8:33221322-33221341 MsG0880043946.01.T01:intron 10.0%
!! TGTATTTATGTAAAATTTAA+AGG + Chr8:33221321-33221340 MsG0880043946.01.T01:intron 10.0%
!! TATAAAGTAAATAAGCTTTA+GGG - Chr8:33221981-33222000 None:intergenic 15.0%
!! TTATAAAGTAAATAAGCTTT+AGG - Chr8:33221982-33222001 None:intergenic 15.0%
!!! GTGTTTTTTATTTTATTTCA+GGG + Chr8:33221156-33221175 MsG0880043946.01.T01:intron 15.0%
!!! TAAATTCTAGCATTTTAATT+TGG + Chr8:33221611-33221630 MsG0880043946.01.T01:intron 15.0%
!!! TAATTTTCTCAAATTATTAG+CGG - Chr8:33222125-33222144 None:intergenic 15.0%
!!! TGTGTTTTTTATTTTATTTC+AGG + Chr8:33221155-33221174 MsG0880043946.01.T01:intron 15.0%
!!! TGTTTTTTATTTTATTTCAG+GGG + Chr8:33221157-33221176 MsG0880043946.01.T01:intron 15.0%
!! AAAATACCATTGTGAATAAT+TGG + Chr8:33221269-33221288 MsG0880043946.01.T01:intron 20.0%
!! AATTTGAGAAAATTATGTGT+CGG + Chr8:33222130-33222149 MsG0880043946.01.T01:intron 20.0%
!! GTTTAAAAATTGTGAATCTT+AGG - Chr8:33224762-33224781 None:intergenic 20.0%
!! TAAATCTATACCATCATTAA+TGG - Chr8:33222754-33222773 None:intergenic 20.0%
!! TCATTAAAAGATTAGAAGAA+TGG - Chr8:33222802-33222821 None:intergenic 20.0%
!! TTTCAAACCAACATAAAAAA+GGG - Chr8:33221229-33221248 None:intergenic 20.0%
!!! ACTTTATTTATTTTCCTTGT+GGG + Chr8:33223017-33223036 MsG0880043946.01.T01:intron 20.0%
!!! ATATTAACCCTTTTTTATGT+TGG + Chr8:33221219-33221238 MsG0880043946.01.T01:intron 20.0%
!!! ATTCTTCTAATCTTTTAATG+AGG + Chr8:33222801-33222820 MsG0880043946.01.T01:intron 20.0%
!!! TACTTTATTTATTTTCCTTG+TGG + Chr8:33223016-33223035 MsG0880043946.01.T01:intron 20.0%
!!! TTCTTCTAATCTTTTAATGA+GGG + Chr8:33222802-33222821 MsG0880043946.01.T01:intron 20.0%
!!! TTCTTTTCTTTTCCATTTTA+TGG + Chr8:33224401-33224420 MsG0880043946.01.T01:intron 20.0%
!!! TTTTACAGAGATTTATATTG+CGG + Chr8:33221345-33221364 MsG0880043946.01.T01:intron 20.0%
!!! TTTTATGAATTATTCACTCA+AGG + Chr8:33223182-33223201 MsG0880043946.01.T01:intron 20.0%
!!! TTTTCAAACCAACATAAAAA+AGG - Chr8:33221230-33221249 None:intergenic 20.0%
! AAGCATAAGTGTAAATGTTA+AGG - Chr8:33222859-33222878 None:intergenic 25.0%
! AATTATAGCCATAACTACAA+GGG - Chr8:33222389-33222408 None:intergenic 25.0%
! AATTGATAAATTGAATCAGC+TGG + Chr8:33223242-33223261 MsG0880043946.01.T01:intron 25.0%
! ATATGAAAGATGGAAATTCT+GGG - Chr8:33224845-33224864 None:intergenic 25.0%
! ATGAAGAATCCAAAATTACA+CGG + Chr8:33221120-33221139 MsG0880043946.01.T01:intron 25.0%
! ATTGTATATGTAAGATCGAT+TGG + Chr8:33222311-33222330 MsG0880043946.01.T01:intron 25.0%
! CAACACGAATTAAAAGAAAT+CGG + Chr8:33224964-33224983 MsG0880043946.01.T01:CDS 25.0%
! CAATTCATTTGTAATGCAAT+GGG + Chr8:33222584-33222603 MsG0880043946.01.T01:intron 25.0%
! CTTGTAATTGACATTAAAGA+TGG + Chr8:33223734-33223753 MsG0880043946.01.T01:CDS 25.0%
! GAATCAATGTATATGAAAGA+TGG - Chr8:33224855-33224874 None:intergenic 25.0%
! GGTAATTAATTGAAGAGATT+TGG + Chr8:33222685-33222704 MsG0880043946.01.T01:intron 25.0%
! TACTATTGAATAAGTTTGTG+AGG + Chr8:33224784-33224803 MsG0880043946.01.T01:intron 25.0%
! TATATGAAAGATGGAAATTC+TGG - Chr8:33224846-33224865 None:intergenic 25.0%
! TCTATATCACATTGATACTA+GGG + Chr8:33222507-33222526 MsG0880043946.01.T01:intron 25.0%
! TTAGATAGTTCTTCAAAGAT+TGG + Chr8:33224603-33224622 MsG0880043946.01.T01:CDS 25.0%
!! CCTAACATTTTTCCTAATTA+GGG - Chr8:33222340-33222359 None:intergenic 25.0%
!! GTATACTCAGAAAGTTTTTA+TGG - Chr8:33222999-33223018 None:intergenic 25.0%
!! TCCTAACATTTTTCCTAATT+AGG - Chr8:33222341-33222360 None:intergenic 25.0%
!! TTGCTATTGATATGATAGTA+TGG + Chr8:33222634-33222653 MsG0880043946.01.T01:intron 25.0%
!!! AAAGATATTGATTCTGTCAA+TGG + Chr8:33222664-33222683 MsG0880043946.01.T01:intron 25.0%
!!! TAGTTTTCTGTATTGATATC+CGG + Chr8:33222484-33222503 MsG0880043946.01.T01:intron 25.0%
!!! TTCATTAAACTTTGAAGTAG+TGG + Chr8:33222251-33222270 MsG0880043946.01.T01:intron 25.0%
AAAGAAACAGACAGAACAAT+TGG - Chr8:33224208-33224227 None:intergenic 30.0%
AACATTGTATTCAGCATGAA+CGG + Chr8:33223821-33223840 MsG0880043946.01.T01:CDS 30.0%
AAGAACCAGAAGTAAATCTT+TGG + Chr8:33225031-33225050 MsG0880043946.01.T01:CDS 30.0%
ACCATTGTGAATAATTGGTT+GGG + Chr8:33221274-33221293 MsG0880043946.01.T01:intron 30.0%
AGAGCACAAGATTTACATAT+GGG + Chr8:33224105-33224124 MsG0880043946.01.T01:CDS 30.0%
AGTATCAATGTGATATAGAC+CGG - Chr8:33222506-33222525 None:intergenic 30.0%
ATCAACCAAAGATTTACTTC+TGG - Chr8:33225039-33225058 None:intergenic 30.0%
ATCTTGTGAAAATCCTTGAA+GGG + Chr8:33224140-33224159 MsG0880043946.01.T01:CDS 30.0%
ATTTACATATGGGATAGAAC+TGG + Chr8:33224115-33224134 MsG0880043946.01.T01:CDS 30.0%
CAATTATAGCCATAACTACA+AGG - Chr8:33222390-33222409 None:intergenic 30.0%
CCAATTCATTTGTAATGCAA+TGG + Chr8:33222583-33222602 MsG0880043946.01.T01:intron 30.0%
CCATCTGTAAATGATATTCA+AGG - Chr8:33224936-33224955 None:intergenic 30.0%
CCATTGCATTACAAATGAAT+TGG - Chr8:33222586-33222605 None:intergenic 30.0%
CCCTAATTAGGAAAAATGTT+AGG + Chr8:33222337-33222356 MsG0880043946.01.T01:intron 30.0%
CCTTGAATATCATTTACAGA+TGG + Chr8:33224933-33224952 MsG0880043946.01.T01:intron 30.0%
CTGTGTTTATTTGAACTTCT+TGG + Chr8:33221944-33221963 MsG0880043946.01.T01:intron 30.0%
GCTATAATTGATGCTGAATT+AGG + Chr8:33222400-33222419 MsG0880043946.01.T01:CDS 30.0%
GTCTATATCACATTGATACT+AGG + Chr8:33222506-33222525 MsG0880043946.01.T01:intron 30.0%
GTGTTTAAGTCAACAATCAT+CGG - Chr8:33223548-33223567 None:intergenic 30.0%
TAATGTATGTGAACGTTGTA+TGG + Chr8:33224363-33224382 MsG0880043946.01.T01:intron 30.0%
TAATTGGTTGGGAAAGAAAT+AGG + Chr8:33221285-33221304 MsG0880043946.01.T01:intron 30.0%
TACCATTGTGAATAATTGGT+TGG + Chr8:33221273-33221292 MsG0880043946.01.T01:intron 30.0%
TATAGTTGTATAGTGTGTAG+CGG - Chr8:33222282-33222301 None:intergenic 30.0%
TATTCGTCTTCTATGCTATT+TGG - Chr8:33221853-33221872 None:intergenic 30.0%
TGAAGAATCCAAAATTACAC+GGG + Chr8:33221121-33221140 MsG0880043946.01.T01:intron 30.0%
TGTGTTGCATGTAATCTATT+TGG + Chr8:33222942-33222961 MsG0880043946.01.T01:intron 30.0%
TGTTTATTTGAACTTCTTGG+TGG + Chr8:33221947-33221966 MsG0880043946.01.T01:intron 30.0%
TTAGTGAGTGTATATCTTTC+TGG + Chr8:33223061-33223080 MsG0880043946.01.T01:intron 30.0%
TTCTGTGATACCATTAATGA+TGG + Chr8:33222741-33222760 MsG0880043946.01.T01:intron 30.0%
! ATTAACTTGAGGGCAAATTT+GGG - Chr8:33221914-33221933 None:intergenic 30.0%
! TATTTGGGATTTAGAAGTCA+GGG + Chr8:33223286-33223305 MsG0880043946.01.T01:CDS 30.0%
! TGTTACAAGCATATTTTGCA+TGG - Chr8:33224726-33224745 None:intergenic 30.0%
! TTAGGTTTGAAGTGTGTATA+AGG + Chr8:33222418-33222437 MsG0880043946.01.T01:intron 30.0%
! TTATTTGGGATTTAGAAGTC+AGG + Chr8:33223285-33223304 MsG0880043946.01.T01:CDS 30.0%
!! ATAACCTTGTAATTTTAGCG+AGG - Chr8:33221194-33221213 None:intergenic 30.0%
AAATCAATAAGGGCTTCCTT+AGG - Chr8:33224166-33224185 None:intergenic 35.0%
AATGAATTGGACCAGAAAAC+AGG - Chr8:33222573-33222592 None:intergenic 35.0%
AATTGACATTAAAGATGGCG+AGG + Chr8:33223739-33223758 MsG0880043946.01.T01:CDS 35.0%
ACTCAAATGATCGAGTAATC+AGG + Chr8:33223861-33223880 MsG0880043946.01.T01:CDS 35.0%
ACTTGGTTGAGACCATAAAA+TGG - Chr8:33224416-33224435 None:intergenic 35.0%
AGATACTCTTCTATCACTTC+TGG - Chr8:33221029-33221048 None:intergenic 35.0%
AGTAACATGAGTGAGAAAGT+TGG - Chr8:33223220-33223239 None:intergenic 35.0%
ATGCCATGCCAAATCAATAA+GGG - Chr8:33224176-33224195 None:intergenic 35.0%
CATAGAGATTGAGGAAAATG+AGG + Chr8:33224294-33224313 MsG0880043946.01.T01:CDS 35.0%
CATCTTGTGAAAATCCTTGA+AGG + Chr8:33224139-33224158 MsG0880043946.01.T01:CDS 35.0%
CCAGTTCTCAATATACTCTT+TGG - Chr8:33224254-33224273 None:intergenic 35.0%
CTTCACATTGTAGAGAATTG+TGG + Chr8:33221381-33221400 MsG0880043946.01.T01:intron 35.0%
GACCAACAAATACTGGTAAT+GGG - Chr8:33223350-33223369 None:intergenic 35.0%
GAGTGGCATAGTTTATATCT+GGG + Chr8:33224228-33224247 MsG0880043946.01.T01:CDS 35.0%
GATTAACACCCTTGTAGTTA+TGG + Chr8:33222378-33222397 MsG0880043946.01.T01:CDS 35.0%
GGTTTATGCAGTTCACAAAT+AGG - Chr8:33222893-33222912 None:intergenic 35.0%
GTAAATAACAGCTGCTATAG+TGG + Chr8:33221801-33221820 MsG0880043946.01.T01:intron 35.0%
TAAACCACGTCTAGTAAGAA+GGG - Chr8:33221096-33221115 None:intergenic 35.0%
TAAATCTGCATCTGAATGTG+TGG + Chr8:33223130-33223149 MsG0880043946.01.T01:intron 35.0%
TACCATATGTGTATGAAGCA+CGG + Chr8:33222065-33222084 MsG0880043946.01.T01:intron 35.0%
TAGATAACATAGCTCTTCCT+CGG - Chr8:33224538-33224557 None:intergenic 35.0%
TATGGAAACCTGGTTTATGT+GGG + Chr8:33223692-33223711 MsG0880043946.01.T01:CDS 35.0%
TCAAATAAACACAGCGTGAA+TGG - Chr8:33221938-33221957 None:intergenic 35.0%
TCACATACATTATCAGTGTC+AGG - Chr8:33224355-33224374 None:intergenic 35.0%
TCATATCCTTGCAGGTAAAA+GGG + Chr8:33224436-33224455 MsG0880043946.01.T01:intron 35.0%
TCCCAACCAATTATTCACAA+TGG - Chr8:33221278-33221297 None:intergenic 35.0%
TCCTCAATCTCTATGAAATC+AGG - Chr8:33224289-33224308 None:intergenic 35.0%
TCCTGATTTCATAGAGATTG+AGG + Chr8:33224285-33224304 MsG0880043946.01.T01:CDS 35.0%
TCTCAAATTATTAGCGGTGT+CGG - Chr8:33222119-33222138 None:intergenic 35.0%
TCTGCACACAAAAATTTACC+AGG - Chr8:33221690-33221709 None:intergenic 35.0%
TGACATTATAACAGTCGAGA+AGG + Chr8:33224485-33224504 MsG0880043946.01.T01:CDS 35.0%
TGACCAACAAATACTGGTAA+TGG - Chr8:33223351-33223370 None:intergenic 35.0%
TGAGTGGCATAGTTTATATC+TGG + Chr8:33224227-33224246 MsG0880043946.01.T01:CDS 35.0%
TGATTGCATCTTGAAACTCA+CGG - Chr8:33224012-33224031 None:intergenic 35.0%
TTAAACCACGTCTAGTAAGA+AGG - Chr8:33221097-33221116 None:intergenic 35.0%
TTCATATCCTTGCAGGTAAA+AGG + Chr8:33224435-33224454 MsG0880043946.01.T01:intron 35.0%
TTGACACAAAGTATGAAGCA+CGG - Chr8:33222207-33222226 None:intergenic 35.0%
TTTCAGTAAGTATGGAAACC+TGG + Chr8:33223682-33223701 MsG0880043946.01.T01:CDS 35.0%
! AAATGGTGTTGAGAAGTTGA+AGG + Chr8:33223958-33223977 MsG0880043946.01.T01:CDS 35.0%
! ACCAGTATTTGTTGGTCAAA+GGG + Chr8:33223353-33223372 MsG0880043946.01.T01:CDS 35.0%
! AGAAAATTATGTGTCGGTGT+CGG + Chr8:33222136-33222155 MsG0880043946.01.T01:intron 35.0%
! AGCTGTTATTTACTAGACAC+AGG - Chr8:33221794-33221813 None:intergenic 35.0%
! AGTGCTCTAACTTCATCTTT+TGG - Chr8:33223908-33223927 None:intergenic 35.0%
! ATGATGGAAGCTGTGTTATT+TGG + Chr8:33223270-33223289 MsG0880043946.01.T01:CDS 35.0%
! ATTTGGGATTTAGAAGTCAG+GGG + Chr8:33223287-33223306 MsG0880043946.01.T01:CDS 35.0%
! CATTAACTTGAGGGCAAATT+TGG - Chr8:33221915-33221934 None:intergenic 35.0%
! CCAAAGAGTATATTGAGAAC+TGG + Chr8:33224251-33224270 MsG0880043946.01.T01:CDS 35.0%
! GAGAGCACAAGATTTACATA+TGG + Chr8:33224104-33224123 MsG0880043946.01.T01:CDS 35.0%
! GTTTGAAGTGTGTATAAGGA+GGG + Chr8:33222422-33222441 MsG0880043946.01.T01:intron 35.0%
! TAAACCTTTTGCGATGAGTT+CGG + Chr8:33222907-33222926 MsG0880043946.01.T01:intron 35.0%
! TAACTCTGGATCACCATTTT+CGG + Chr8:33224635-33224654 MsG0880043946.01.T01:CDS 35.0%
! TAAGGAAGCCCTTATTGATT+TGG + Chr8:33224165-33224184 MsG0880043946.01.T01:CDS 35.0%
! TACCAGTATTTGTTGGTCAA+AGG + Chr8:33223352-33223371 MsG0880043946.01.T01:CDS 35.0%
! TATACCGTTATCCTGTTTTC+TGG + Chr8:33222559-33222578 MsG0880043946.01.T01:intron 35.0%
! TGATGATTTGTCAGATCTTG+AGG - Chr8:33225012-33225031 None:intergenic 35.0%
!! AATAAGCTGATTTGTACGCT+AGG + Chr8:33221710-33221729 MsG0880043946.01.T01:intron 35.0%
!! AGAAGTGATAGAAGAGTATC+TGG + Chr8:33221028-33221047 MsG0880043946.01.T01:CDS 35.0%
!! ATAAGCTGATTTGTACGCTA+GGG + Chr8:33221711-33221730 MsG0880043946.01.T01:intron 35.0%
!! TAAATAAGCTTTAGGGCGAA+AGG - Chr8:33221974-33221993 None:intergenic 35.0%
!! TAGAAGAGTATCTGGAACAT+TGG + Chr8:33221036-33221055 MsG0880043946.01.T01:CDS 35.0%
!! TGATGGAAGCTGTGTTATTT+GGG + Chr8:33223271-33223290 MsG0880043946.01.T01:CDS 35.0%
AAATCGGAAACCATCAGAGA+AGG + Chr8:33224980-33224999 MsG0880043946.01.T01:CDS 40.0%
AACCAAGTTCATATCCTTGC+AGG + Chr8:33224428-33224447 MsG0880043946.01.T01:intron 40.0%
AAGAACCTCGGTGATCTAAA+TGG + Chr8:33223941-33223960 MsG0880043946.01.T01:CDS 40.0%
ACCCTTTGACCAACAAATAC+TGG - Chr8:33223357-33223376 None:intergenic 40.0%
AGAATCCAAAATTACACGGG+TGG + Chr8:33221124-33221143 MsG0880043946.01.T01:intron 40.0%
AGAATTGTGGTCGAATGATG+CGG + Chr8:33221394-33221413 MsG0880043946.01.T01:intron 40.0%
AGACAAGTCATTATCCCTGT+GGG + Chr8:33223403-33223422 MsG0880043946.01.T01:CDS 40.0%
ATCCGTGCTTCATACACATA+TGG - Chr8:33222070-33222089 None:intergenic 40.0%
ATGAAGACGAGCTAGTAAAG+GGG - Chr8:33223474-33223493 None:intergenic 40.0%
ATGTGTATGAAGCACGGATA+CGG + Chr8:33222071-33222090 MsG0880043946.01.T01:intron 40.0%
ATTACCTTCAACTGGACTTG+AGG - Chr8:33224697-33224716 None:intergenic 40.0%
CAGACCTCGCTAAAATTACA+AGG + Chr8:33221187-33221206 MsG0880043946.01.T01:intron 40.0%
CTCCCATTACCAGTATTTGT+TGG + Chr8:33223345-33223364 MsG0880043946.01.T01:CDS 40.0%
GATGAAGACGAGCTAGTAAA+GGG - Chr8:33223475-33223494 None:intergenic 40.0%
GATGCCATGCCAAATCAATA+AGG - Chr8:33224177-33224196 None:intergenic 40.0%
GCTGCATGTTTCAGTAAGTA+TGG + Chr8:33223674-33223693 MsG0880043946.01.T01:CDS 40.0%
GTATGGAAACCTGGTTTATG+TGG + Chr8:33223691-33223710 MsG0880043946.01.T01:CDS 40.0%
GTCTGATGTCAATGAAGATG+AGG + Chr8:33224458-33224477 MsG0880043946.01.T01:CDS 40.0%
GTTGAACTGAACAAGAACCT+CGG + Chr8:33223929-33223948 MsG0880043946.01.T01:CDS 40.0%
GTTTATGTGGGAAACTCGAA+AGG + Chr8:33223704-33223723 MsG0880043946.01.T01:CDS 40.0%
TACCTGCAAGGATATGAACT+TGG - Chr8:33224433-33224452 None:intergenic 40.0%
TCCTGAAATCTAATCCCACA+AGG - Chr8:33223034-33223053 None:intergenic 40.0%
TCCTTGTGGGATTAGATTTC+AGG + Chr8:33223030-33223049 MsG0880043946.01.T01:intron 40.0%
TCTGGAAAATCACCTTGCAA+CGG - Chr8:33221011-33221030 None:intergenic 40.0%
TGGACCAGAAAACAGGATAA+CGG - Chr8:33222566-33222585 None:intergenic 40.0%
TGTGAACGTTGTATGGTCAT+AGG + Chr8:33224370-33224389 MsG0880043946.01.T01:intron 40.0%
TGTGTTCCAACCAATGATGA+TGG + Chr8:33221577-33221596 MsG0880043946.01.T01:intron 40.0%
TTAATGAGGGTGAATGTGTG+TGG + Chr8:33222815-33222834 MsG0880043946.01.T01:intron 40.0%
TTACTGAAACATGCAGCAGT+AGG - Chr8:33223671-33223690 None:intergenic 40.0%
TTGTATAGTGTGTAGCGGTA+TGG - Chr8:33222277-33222296 None:intergenic 40.0%
TTGTGGGATTAGATTTCAGG+AGG + Chr8:33223033-33223052 MsG0880043946.01.T01:intron 40.0%
TTTACTAGCTCGTCTTCATC+CGG + Chr8:33223475-33223494 MsG0880043946.01.T01:CDS 40.0%
! AGATTCCACCCGTGTAATTT+TGG - Chr8:33221132-33221151 None:intergenic 40.0%
! AGTATTTGTTGGTCAAAGGG+TGG + Chr8:33223356-33223375 MsG0880043946.01.T01:CDS 40.0%
! ATCACCATTTTCGGAAGAAG+TGG + Chr8:33224644-33224663 MsG0880043946.01.T01:CDS 40.0%
! ATCATTTACAGATGGTGCTG+TGG + Chr8:33224941-33224960 MsG0880043946.01.T01:intron 40.0%
! ATCGATTGGTTGCCCTAATT+AGG + Chr8:33222325-33222344 MsG0880043946.01.T01:intron 40.0%
! ATTGGTGACAGCAATAACTC+TGG + Chr8:33224621-33224640 MsG0880043946.01.T01:CDS 40.0%
! CGTGAATGGCATTAACTTGA+GGG - Chr8:33221924-33221943 None:intergenic 40.0%
! GAAATTCTGGGAGCAACATA+GGG - Chr8:33224833-33224852 None:intergenic 40.0%
! GCTCTAACTTCATCTTTTGG+CGG - Chr8:33223905-33223924 None:intergenic 40.0%
! GGTTTGAAGTGTGTATAAGG+AGG + Chr8:33222421-33222440 MsG0880043946.01.T01:intron 40.0%
! GTTCTGTCTGTTTCTTTGAG+TGG + Chr8:33224211-33224230 MsG0880043946.01.T01:CDS 40.0%
! TGAGGAAAATGAGGAGTATG+TGG + Chr8:33224303-33224322 MsG0880043946.01.T01:CDS 40.0%
! TGTATAAGGAGGGAAAGTGT+AGG + Chr8:33222432-33222451 MsG0880043946.01.T01:intron 40.0%
!! AAGCCCTTATTGATTTGGCA+TGG + Chr8:33224170-33224189 MsG0880043946.01.T01:CDS 40.0%
!! AGATTTGGTTCTCATGCAAG+TGG + Chr8:33222700-33222719 MsG0880043946.01.T01:intron 40.0%
!! CAAGGGTGTTAATCTGCAAT+TGG - Chr8:33222372-33222391 None:intergenic 40.0%
AACAACCTGTCATCCTGTTC+AGG - Chr8:33224585-33224604 None:intergenic 45.0%
ACTACTGAACCACCAGAGAT+AGG - Chr8:33223797-33223816 None:intergenic 45.0%
AGAAACCTACGCTCATACGA+AGG - Chr8:33224810-33224829 None:intergenic 45.0%
ATAGGAACACCACCAGAGAT+AGG - Chr8:33223779-33223798 None:intergenic 45.0%
ATATCAGAGTCGCAGAAAGC+AGG - Chr8:33224513-33224532 None:intergenic 45.0%
ATATTCTGATGCCTCCGCAA+TGG - Chr8:33221553-33221572 None:intergenic 45.0%
ATGTTCCTGAACAGGATGAC+AGG + Chr8:33224577-33224596 MsG0880043946.01.T01:CDS 45.0%
ATTTACCAGGCTGCGCTATT+TGG - Chr8:33221677-33221696 None:intergenic 45.0%
CAACACCATTTAGATCACCG+AGG - Chr8:33223949-33223968 None:intergenic 45.0%
CACCAAGCAGAAAGATGGTT+TGG - Chr8:33223507-33223526 None:intergenic 45.0%
CAGACAAGTCATTATCCCTG+TGG + Chr8:33223402-33223421 MsG0880043946.01.T01:CDS 45.0%
CAGTCAGCTGAGCTTGAATA+TGG + Chr8:33221434-33221453 MsG0880043946.01.T01:intron 45.0%
CATGTTGAAGATCCGTTGCA+AGG + Chr8:33220996-33221015 MsG0880043946.01.T01:CDS 45.0%
CTCCAAACCATCTTTCTGCT+TGG + Chr8:33223502-33223521 MsG0880043946.01.T01:CDS 45.0%
CTGCATCTGAATGTGTGGAT+TGG + Chr8:33223135-33223154 MsG0880043946.01.T01:intron 45.0%
GAAAATCCTTGAAGGGCCTA+AGG + Chr8:33224147-33224166 MsG0880043946.01.T01:CDS 45.0%
GACAGAACAATTGGACGTAC+AGG - Chr8:33224199-33224218 None:intergenic 45.0%
GCTACCACTTCTTCCGAAAA+TGG - Chr8:33224651-33224670 None:intergenic 45.0%
GGATGAAGACGAGCTAGTAA+AGG - Chr8:33223476-33223495 None:intergenic 45.0%
GGGATGTCTTGAGTGGTAAA+AGG + Chr8:33223423-33223442 MsG0880043946.01.T01:CDS 45.0%
GTCAACAATCATCGGAGTAC+AGG - Chr8:33223540-33223559 None:intergenic 45.0%
GTCATCCTGTTCAGGAACAT+CGG - Chr8:33224577-33224596 None:intergenic 45.0%
GTTGAGAAGTTGAAGGCTGT+AGG + Chr8:33223965-33223984 MsG0880043946.01.T01:CDS 45.0%
TCATCCTGTTCAGGAACATC+GGG - Chr8:33224576-33224595 None:intergenic 45.0%
TCGAGTTTCCCACATAAACC+AGG - Chr8:33223703-33223722 None:intergenic 45.0%
TCGGAAGAAGTGGTAGCAAA+TGG + Chr8:33224654-33224673 MsG0880043946.01.T01:CDS 45.0%
TCTCCATCACCACTGAAACA+GGG - Chr8:33224055-33224074 None:intergenic 45.0%
TCTGTCTCTGACAAACCAAG+TGG + Chr8:33223593-33223612 MsG0880043946.01.T01:CDS 45.0%
TGTTCAGGAACATCGGGAAT+GGG - Chr8:33224570-33224589 None:intergenic 45.0%
TTACTAGCTCGTCTTCATCC+GGG + Chr8:33223476-33223495 MsG0880043946.01.T01:CDS 45.0%
TTGACCGAACTCATCGCAAA+AGG - Chr8:33222914-33222933 None:intergenic 45.0%
! AATCACGAAAGTGCACTGGA+AGG + Chr8:33224027-33224046 MsG0880043946.01.T01:CDS 45.0%
! ATCAGACCCTTTTACCTGCA+AGG - Chr8:33224445-33224464 None:intergenic 45.0%
! ATGCAATCACGAAAGTGCAC+TGG + Chr8:33224023-33224042 MsG0880043946.01.T01:CDS 45.0%
! CAAGCAGAAAGATGGTTTGG+AGG - Chr8:33223504-33223523 None:intergenic 45.0%
! GAAACCATCAGAGAAGGTGT+TGG + Chr8:33224986-33225005 MsG0880043946.01.T01:CDS 45.0%
! GCGTGAATGGCATTAACTTG+AGG - Chr8:33221925-33221944 None:intergenic 45.0%
! GGAAATTCTGGGAGCAACAT+AGG - Chr8:33224834-33224853 None:intergenic 45.0%
!! GTTCCAACCAATGATGATGG+CGG + Chr8:33221580-33221599 MsG0880043946.01.T01:intron 45.0%
!! TTTCAGTGGTGATGGAGAGT+GGG + Chr8:33224057-33224076 MsG0880043946.01.T01:CDS 45.0%
ACACAGACCGCCATCATCAT+TGG - Chr8:33221590-33221609 None:intergenic 50.0%
ACATCGGGAATGGGAGATAC+TGG - Chr8:33224561-33224580 None:intergenic 50.0%
ACATGCAGCAGTAGGTGTGA+AGG - Chr8:33223663-33223682 None:intergenic 50.0%
ACCACCAGAGATAGGAACCA+TGG - Chr8:33223771-33223790 None:intergenic 50.0%
ACCACTCAAGACATCCCACA+GGG - Chr8:33223420-33223439 None:intergenic 50.0%
AGACCGCCATCATCATTGGT+TGG - Chr8:33221586-33221605 None:intergenic 50.0%
ATCACCATTGCAGCAGCATC+AGG - Chr8:33221523-33221542 None:intergenic 50.0%
ATCATCGGAGTACAGGACAG+AGG - Chr8:33223533-33223552 None:intergenic 50.0%
CAGCTGACTGCAAGGAATCT+GGG - Chr8:33221424-33221443 None:intergenic 50.0%
CATGCCTCAAGTCCAGTTGA+AGG + Chr8:33224690-33224709 MsG0880043946.01.T01:CDS 50.0%
CATTCCCGATGTTCCTGAAC+AGG + Chr8:33224569-33224588 MsG0880043946.01.T01:CDS 50.0%
CTCTCCATCACCACTGAAAC+AGG - Chr8:33224056-33224075 None:intergenic 50.0%
CTGTTCAGGAACATCGGGAA+TGG - Chr8:33224571-33224590 None:intergenic 50.0%
GAATCAGCTGGCTGCAATGA+TGG + Chr8:33223254-33223273 MsG0880043946.01.T01:intron 50.0%
GCTGCTATAGTGGCATTGCA+CGG + Chr8:33221811-33221830 MsG0880043946.01.T01:intron 50.0%
GGACACACCAAGCAGAAAGA+TGG - Chr8:33223512-33223531 None:intergenic 50.0%
GGCGTGACATTACCTTCAAC+TGG - Chr8:33224705-33224724 None:intergenic 50.0%
GGTACCCTTCTTACTAGACG+TGG + Chr8:33221089-33221108 MsG0880043946.01.T01:intron 50.0%
GTGTAGGTCTCCTGGATACT+CGG + Chr8:33222448-33222467 MsG0880043946.01.T01:intron 50.0%
TACCACTCAAGACATCCCAC+AGG - Chr8:33223421-33223440 None:intergenic 50.0%
TACTAGCTCGTCTTCATCCG+GGG + Chr8:33223477-33223496 MsG0880043946.01.T01:CDS 50.0%
TATGAAGCACGGACACTCCT+CGG - Chr8:33222196-33222215 None:intergenic 50.0%
TCAGCTGACTGCAAGGAATC+TGG - Chr8:33221425-33221444 None:intergenic 50.0%
TGTAGGTCTCCTGGATACTC+GGG + Chr8:33222449-33222468 MsG0880043946.01.T01:intron 50.0%
TTCAAGCTCAGCTGACTGCA+AGG - Chr8:33221432-33221451 None:intergenic 50.0%
! AAAGATGGTTTGGAGGACCC+CGG - Chr8:33223497-33223516 None:intergenic 50.0%
! ATGAGTTCCTGCTGACTGCA+GGG + Chr8:33221488-33221507 MsG0880043946.01.T01:intron 50.0%
! CTGCTGACTGCAGGGAATTT+GGG + Chr8:33221496-33221515 MsG0880043946.01.T01:intron 50.0%
! TCTGGTGGTGTTCCTATCTC+TGG + Chr8:33223782-33223801 MsG0880043946.01.T01:CDS 50.0%
! TGCACGGCATTTTTGTGCAG+TGG + Chr8:33221827-33221846 MsG0880043946.01.T01:intron 50.0%
! TGCGTTGCTTTCAATCGTCG+TGG + Chr8:33221068-33221087 MsG0880043946.01.T01:CDS 50.0%
! TGGTGATAGCGTTGCCATTG+CGG + Chr8:33221536-33221555 MsG0880043946.01.T01:intron 50.0%
!! GTTGGTGGTTCTGCTAGCAA+AGG + Chr8:33224082-33224101 MsG0880043946.01.T01:CDS 50.0%
!! GTTTCAGTGGTGATGGAGAG+TGG + Chr8:33224056-33224075 MsG0880043946.01.T01:CDS 50.0%
AACCCTGCCTCACGCAACAA+GGG + Chr8:33223620-33223639 MsG0880043946.01.T01:CDS 55.0%
AACCCTTGTTGCGTGAGGCA+GGG - Chr8:33223625-33223644 None:intergenic 55.0%
AGCAGAACCCTTGTTGCGTG+AGG - Chr8:33223630-33223649 None:intergenic 55.0%
ATCCCATACCCCGAGTATCC+AGG - Chr8:33222461-33222480 None:intergenic 55.0%
CCAAATTCCCTGCAGTCAGC+AGG - Chr8:33221498-33221517 None:intergenic 55.0%
CGTGCCATGGTTCCTATCTC+TGG + Chr8:33223764-33223783 MsG0880043946.01.T01:CDS 55.0%
CTCCTGGATACTCGGGGTAT+GGG + Chr8:33222456-33222475 MsG0880043946.01.T01:intron 55.0%
CTGCAGTCAGCAGGAACTCA+TGG - Chr8:33221489-33221508 None:intergenic 55.0%
CTGCGACTCTGATATGTCCG+AGG + Chr8:33224518-33224537 MsG0880043946.01.T01:CDS 55.0%
GAGGCCAACACCTTCTCTGA+TGG - Chr8:33224993-33225012 None:intergenic 55.0%
GCACCCTGTTTCAGTGGTGA+TGG + Chr8:33224049-33224068 MsG0880043946.01.T01:CDS 55.0%
GCACGGATACGGACACAACA+CGG + Chr8:33222082-33222101 MsG0880043946.01.T01:intron 55.0%
GCCATGGTTCCTATCTCTGG+TGG + Chr8:33223767-33223786 MsG0880043946.01.T01:CDS 55.0%
GGAACTCATGGTCAGGCAGT+TGG - Chr8:33221477-33221496 None:intergenic 55.0%
GGTGGTGTTCCTATCTCTGG+TGG + Chr8:33223785-33223804 MsG0880043946.01.T01:CDS 55.0%
GTAGGTCTCCTGGATACTCG+GGG + Chr8:33222450-33222469 MsG0880043946.01.T01:intron 55.0%
GTCAGCAGGAACTCATGGTC+AGG - Chr8:33221484-33221503 None:intergenic 55.0%
TAACCCTGCCTCACGCAACA+AGG + Chr8:33223619-33223638 MsG0880043946.01.T01:CDS 55.0%
TCACGCAACAAGGGTTCTGC+TGG + Chr8:33223629-33223648 MsG0880043946.01.T01:CDS 55.0%
TCCCTGTGGGATGTCTTGAG+TGG + Chr8:33223416-33223435 MsG0880043946.01.T01:CDS 55.0%
TCTCCTGGATACTCGGGGTA+TGG + Chr8:33222455-33222474 MsG0880043946.01.T01:intron 55.0%
TGAGGCCTTCGTATGAGCGT+AGG + Chr8:33224802-33224821 MsG0880043946.01.T01:intron 55.0%
TGCAGCAGTAGGTGTGAAGG+AGG - Chr8:33223660-33223679 None:intergenic 55.0%
TTCTGCCAAATAGCGCAGCC+TGG + Chr8:33221669-33221688 MsG0880043946.01.T01:intron 55.0%
TTGTTGCGTGAGGCAGGGTT+AGG - Chr8:33223620-33223639 None:intergenic 55.0%
! CATGAGTTCCTGCTGACTGC+AGG + Chr8:33221487-33221506 MsG0880043946.01.T01:intron 55.0%
! CCTGCTGACTGCAGGGAATT+TGG + Chr8:33221495-33221514 MsG0880043946.01.T01:intron 55.0%
! GAGGGAAAGTGTAGGTCTCC+TGG + Chr8:33222440-33222459 MsG0880043946.01.T01:intron 55.0%
! TGATAGCGTTGCCATTGCGG+AGG + Chr8:33221539-33221558 MsG0880043946.01.T01:intron 55.0%
!! GATGGAGAGTGGGTTGTTGG+TGG + Chr8:33224067-33224086 MsG0880043946.01.T01:CDS 55.0%
!! GGTGATGGAGAGTGGGTTGT+TGG + Chr8:33224064-33224083 MsG0880043946.01.T01:CDS 55.0%
!! TGGAAGGCACCCTGTTTCAG+TGG + Chr8:33224043-33224062 MsG0880043946.01.T01:CDS 55.0%
ACACCGACGCATATCCGACC+GGG + Chr8:33222159-33222178 MsG0880043946.01.T01:intron 60.0%
GAACCCTTGTTGCGTGAGGC+AGG - Chr8:33223626-33223645 None:intergenic 60.0%
GACACCGACGCATATCCGAC+CGG + Chr8:33222158-33222177 MsG0880043946.01.T01:intron 60.0%
GAGGCAGGGTTAGGTCCACT+TGG - Chr8:33223611-33223630 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+AGG - Chr8:33222190-33222209 None:intergenic 60.0%
GGGCTTCCTTAGGCCCTTCA+AGG - Chr8:33224156-33224175 None:intergenic 60.0%
GGGTCCTGATGCTGCTGCAA+TGG + Chr8:33221516-33221535 MsG0880043946.01.T01:intron 60.0%
TGTCCCGGTCGGATATGCGT+CGG - Chr8:33222165-33222184 None:intergenic 60.0%
! TCCTCGGATTAGGCGTGTCC+CGG - Chr8:33222180-33222199 None:intergenic 60.0%
ACCGGGACACGCCTAATCCG+AGG + Chr8:33222176-33222195 MsG0880043946.01.T01:intron 65.0%
AGATGGCGAGGTGCGTGCCA+TGG + Chr8:33223751-33223770 MsG0880043946.01.T01:CDS 65.0%
! CGGATTAGGCGTGTCCCGGT+CGG - Chr8:33222176-33222195 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 33220987 33225106 33220987 ID=MsG0880043946.01;Name=MsG0880043946.01
Chr8 mRNA 33220987 33225106 33220987 ID=MsG0880043946.01.T01;Parent=MsG0880043946.01;Name=MsG0880043946.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.8|1|1|5|0|566
Chr8 exon 33220987 33221089 33220987 ID=MsG0880043946.01.T01:exon:9967;Parent=MsG0880043946.01.T01
Chr8 exon 33222347 33222421 33222347 ID=MsG0880043946.01.T01:exon:9968;Parent=MsG0880043946.01.T01
Chr8 exon 33223261 33224366 33223261 ID=MsG0880043946.01.T01:exon:9969;Parent=MsG0880043946.01.T01
Chr8 exon 33224450 33224711 33224450 ID=MsG0880043946.01.T01:exon:9970;Parent=MsG0880043946.01.T01
Chr8 exon 33224952 33225106 33224952 ID=MsG0880043946.01.T01:exon:9971;Parent=MsG0880043946.01.T01
Chr8 CDS 33220987 33221089 33220987 ID=MsG0880043946.01.T01:cds;Parent=MsG0880043946.01.T01
Chr8 CDS 33222347 33222421 33222347 ID=MsG0880043946.01.T01:cds;Parent=MsG0880043946.01.T01
Chr8 CDS 33223261 33224366 33223261 ID=MsG0880043946.01.T01:cds;Parent=MsG0880043946.01.T01
Chr8 CDS 33224450 33224711 33224450 ID=MsG0880043946.01.T01:cds;Parent=MsG0880043946.01.T01
Chr8 CDS 33224952 33225106 33224952 ID=MsG0880043946.01.T01:cds;Parent=MsG0880043946.01.T01
Gene Sequence

>MsG0880043946.01.T01

ATGGTTTTGCATGTTGAAGATCCGTTGCAAGGTGATTTTCCAGAAGTGATAGAAGAGTATCTGGAACATTGGATTATGAAATGCGTTGCTTTCAATCGTCGTGGAAAAATGTTAGGAGCAGATTGCCAATTGCAGATTAACACCCTTGTAGTTATGGCTATAATTGATGCTGAATTAGCTGGCTGCAATGATGGAAGCTGTGTTATTTGGGATTTAGAAGTCAGGGGCGTTGCTAAAGAGCTTCGAGATAATGAATGCTGTTCTCCCATTACCAGTATTTGTTGGTCAAAGGGTGGTAATCGAATTCTTGTATCTGCTGCAGACAAGTCATTATCCCTGTGGGATGTCTTGAGTGGTAAAAGGATAAAAAGAATAGTTTTGCAGCAAACCCCTTTACTAGCTCGTCTTCATCCGGGGTCCTCCAAACCATCTTTCTGCTTGGTGTGTCCTCTGTCCTGTACTCCGATGATTGTTGACTTAAACACTGAAAATACAACTTATCTTCAAGTTTCTGTCTCTGACAAACCAAGTGGACCTAACCCTGCCTCACGCAACAAGGGTTCTGCTGGAAGTACCTCCTTCACACCTACTGCTGCATGTTTCAGTAAGTATGGAAACCTGGTTTATGTGGGAAACTCGAAAGGAGAAATTCTTGTAATTGACATTAAAGATGGCGAGGTGCGTGCCATGGTTCCTATCTCTGGTGGTGTTCCTATCTCTGGTGGTTCAGTAGTGAAGAACATTGTATTCAGCATGAACGGACAGTATCTTCTCATGAACTCAAATGATCGAGTAATCAGGATCTATGAAAATCTTCTTCCGCCAAAAGATGAAGTTAGAGCACTAGTTGAACTGAACAAGAACCTCGGTGATCTAAATGGTGTTGAGAAGTTGAAGGCTGTAGGATCAAAATGTTTAACTTTGTTCCGTGAGTTTCAAGATGCAATCACGAAAGTGCACTGGAAGGCACCCTGTTTCAGTGGTGATGGAGAGTGGGTTGTTGGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACATATGGGATAGAACTGGACATCTTGTGAAAATCCTTGAAGGGCCTAAGGAAGCCCTTATTGATTTGGCATGGCATCCTGTACGTCCAATTGTTCTGTCTGTTTCTTTGAGTGGCATAGTTTATATCTGGGCCAAAGAGTATATTGAGAACTGGAGTGCTTTTGCTCCTGATTTCATAGAGATTGAGGAAAATGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGAAGCCTGACACTGATAATGTAAAAGGGTCTGATGTCAATGAAGATGAGGACGTTGACATTATAACAGTCGAGAAGGATCCTGCTTTCTGCGACTCTGATATGTCCGAGGAAGAGCTATGTTATCTACCAGTATCTCCCATTCCCGATGTTCCTGAACAGGATGACAGGTTGTTAGATAGTTCTTCAAAGATTGGTGACAGCAATAACTCTGGATCACCATTTTCGGAAGAAGTGGTAGCAAATGGACATATGATGAGTCATGCCTCAAGTCCAGTTGAAGATGGTGCTGTGGCAACACGAATTAAAAGAAATCGGAAACCATCAGAGAAGGTGTTGGCCTCAAGATCTGACAAATCATCAAGAACCAGAAGTAAATCTTTGGTTGATGAGAGTGATGACAGTGATTTTTATTATGATGAGCTTTCTGATGAATAA
Protein sequence

>MsG0880043946.01.T01

MVLHVEDPLQGDFPEVIEEYLEHWIMKCVAFNRRGKMLGADCQLQINTLVVMAIIDAELAGCNDGSCVIWDLEVRGVAKELRDNECCSPITSICWSKGGNRILVSAADKSLSLWDVLSGKRIKRIVLQQTPLLARLHPGSSKPSFCLVCPLSCTPMIVDLNTENTTYLQVSVSDKPSGPNPASRNKGSAGSTSFTPTAACFSKYGNLVYVGNSKGEILVIDIKDGEVRAMVPISGGVPISGGSVVKNIVFSMNGQYLLMNSNDRVIRIYENLLPPKDEVRALVELNKNLGDLNGVEKLKAVGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRTGHLVKILEGPKEALIDLAWHPVRPIVLSVSLSGIVYIWAKEYIENWSAFAPDFIEIEENEEYVEREDEFDLKPDTDNVKGSDVNEDEDVDIITVEKDPAFCDSDMSEEELCYLPVSPIPDVPEQDDRLLDSSSKIGDSNNSGSPFSEEVVANGHMMSHASSPVEDGAVATRIKRNRKPSEKVLASRSDKSSRTRSKSLVDESDDSDFYYDELSDE*