AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046096.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046096.01.T01 MTR_4g099270 98.195 554 10 0 1 554 1 554 0.0 1113
MsG0880046096.01.T01 MTR_4g099270 97.964 442 9 0 113 554 1 442 0.0 887
MsG0880046096.01.T01 MTR_4g099270 98.615 361 5 0 1 361 22 382 0.0 728
MsG0880046096.01.T01 MTR_4g099270 98.258 287 5 0 1 287 22 308 0.0 582
MsG0880046096.01.T01 MTR_1g111740 50.449 557 253 6 6 552 34 577 0.0 550
MsG0880046096.01.T01 MTR_1g030660 42.669 532 285 6 8 530 53 573 1.03e-141 422
MsG0880046096.01.T01 MTR_2g035430 41.399 529 297 5 10 534 60 579 7.91e-141 420
MsG0880046096.01.T01 MTR_8g089320 40.824 534 301 6 1 529 51 574 9.33e-133 400
MsG0880046096.01.T01 MTR_8g089360 39.746 551 305 8 10 550 48 581 2.56e-132 398
MsG0880046096.01.T01 MTR_8g089360 39.746 551 305 8 10 550 65 598 3.41e-132 398
MsG0880046096.01.T01 MTR_8g461380 36.641 524 319 4 6 526 63 576 3.48e-110 341
MsG0880046096.01.T01 MTR_8g089340 39.220 436 249 6 100 529 2 427 3.15e-87 277
MsG0880046096.01.T01 MTR_7g086510 37.745 408 251 1 9 413 25 432 3.05e-73 246
MsG0880046096.01.T01 MTR_7g086610 35.222 406 260 1 5 407 15 420 3.60e-72 242
MsG0880046096.01.T01 MTR_6g027680 33.661 407 258 4 12 413 36 435 3.69e-68 231
MsG0880046096.01.T01 MTR_6g027630 33.415 407 259 4 12 413 33 432 7.83e-67 227
MsG0880046096.01.T01 MTR_6g027660 34.091 396 252 4 12 401 34 426 2.04e-66 227
MsG0880046096.01.T01 MTR_6g027630 33.415 407 259 4 12 413 33 432 2.27e-66 227
MsG0880046096.01.T01 MTR_6g027650 31.618 408 265 5 9 410 23 422 3.88e-64 221
MsG0880046096.01.T01 MTR_7g007850 31.589 535 337 15 6 526 35 554 5.41e-64 219
MsG0880046096.01.T01 MTR_7g007850 30.605 562 337 17 6 526 35 584 4.98e-62 214
MsG0880046096.01.T01 MTR_7g007850 36.049 405 238 13 6 400 35 428 2.15e-59 205
MsG0880046096.01.T01 MTR_7g007850 36.049 405 238 13 6 400 35 428 3.31e-59 206
MsG0880046096.01.T01 MTR_6g027630 33.051 354 225 4 65 413 1 347 2.99e-53 189
MsG0880046096.01.T01 MTR_6g034535 33.761 234 138 4 315 537 89 316 6.05e-31 123
MsG0880046096.01.T01 MTR_8g089342 48.315 89 46 0 1 89 52 140 2.25e-23 96.7
MsG0880046096.01.T01 MTR_6g027670 32.164 171 111 1 243 413 1 166 1.02e-21 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046096.01.T01 AT5G04770 52.886 537 235 6 6 531 41 570 0.0 554
MsG0880046096.01.T01 AT3G10600 51.277 548 241 6 9 537 43 583 0.0 533
MsG0880046096.01.T01 AT4G21120 42.802 521 286 4 9 526 57 568 1.14e-152 450
MsG0880046096.01.T01 AT3G10600 49.324 444 199 6 113 537 1 437 1.59e-144 424
MsG0880046096.01.T01 AT5G04770 51.163 430 192 6 113 531 1 423 2.71e-141 416
MsG0880046096.01.T01 AT5G04770 55.108 372 159 3 6 370 41 411 5.83e-140 411
MsG0880046096.01.T01 AT2G34960 38.806 536 307 7 8 539 50 568 8.67e-128 386
MsG0880046096.01.T01 AT1G17120 40.344 523 287 6 10 523 69 575 1.45e-118 363
MsG0880046096.01.T01 AT4G21120 40.749 427 241 4 103 526 1 418 1.26e-110 337
MsG0880046096.01.T01 AT3G03720 36.224 392 245 3 14 401 16 406 1.05e-74 248
MsG0880046096.01.T01 AT5G36940 35.606 396 252 1 21 413 28 423 5.21e-70 236
MsG0880046096.01.T01 AT1G58030 34.430 395 256 1 16 407 34 428 5.59e-70 237
MsG0880046096.01.T01 AT1G05940 31.227 538 334 9 7 525 33 553 1.90e-65 223
MsG0880046096.01.T01 AT1G05940 35.000 400 248 5 7 399 33 427 1.44e-61 211
MsG0880046096.01.T01 AT1G05940 35.000 400 248 5 7 399 33 427 2.79e-61 211
MsG0880046096.01.T01 AT1G05940 28.475 446 285 7 98 525 6 435 1.64e-40 152

Find 137 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTCACTTGGTTGAATTCT+TGG 0.073222 8:+68971643 None:intergenic
AGCCGAGGAGATTGAGAATT+TGG 0.146226 8:-68967916 MsG0880046096.01.T01:CDS
GGAGAATTCTTGGGATATTT+TGG 0.185427 8:-68971153 MsG0880046096.01.T01:CDS
TCACTCTTTGCTTGTGTCAT+AGG 0.192722 8:-68970951 MsG0880046096.01.T01:intron
AAGTTGGTTACACTCAAATT+TGG 0.199523 8:+68967873 None:intergenic
CTGTTTGAATTTCCAAACTA+TGG 0.229022 8:+68968208 None:intergenic
TCAATGGCTTTCCTTAATAT+TGG 0.256994 8:-68968799 MsG0880046096.01.T01:CDS
CCCAACTCCAACCAATATTA+AGG 0.269543 8:+68968788 None:intergenic
CCTTATGCTTCTCCATAGTT+TGG 0.287271 8:-68968220 MsG0880046096.01.T01:CDS
CCATAAGGAGCTATCCCTTT+TGG 0.287938 8:+68970351 None:intergenic
AACTTTACTTTATTGCCTAA+TGG 0.315376 8:-68970190 MsG0880046096.01.T01:CDS
TCCTTAATATTGGTTGGAGT+TGG 0.318656 8:-68968789 MsG0880046096.01.T01:CDS
TCTCTTCTAGTTGCAATGTT+AGG 0.325505 8:-68968721 MsG0880046096.01.T01:CDS
ACATGAAAAGGAAACTTAAT+TGG 0.331326 8:-68971605 MsG0880046096.01.T01:CDS
TCCCATGACACAAAGGTATC+TGG 0.331917 8:+68968693 None:intergenic
CTTTCCAACGCTTTGCTATA+TGG 0.333799 8:-68967992 MsG0880046096.01.T01:CDS
TTATGATGCAGGAGAATTCT+TGG 0.344760 8:-68971163 MsG0880046096.01.T01:intron
ATAGTGTACTTTAGTTATAT+AGG 0.350941 8:-68970300 MsG0880046096.01.T01:CDS
GCAGTTCAAGTTCCAGTTGC+TGG 0.352519 8:-68971423 MsG0880046096.01.T01:CDS
GTTGGAGCAGGTGCAAGTTT+AGG 0.353177 8:-68968754 MsG0880046096.01.T01:CDS
CCAATAGGTAGGCTCTTATA+AGG 0.355464 8:+68970237 None:intergenic
CATGATGGTTCCTTACAATA+AGG 0.362306 8:-68970154 MsG0880046096.01.T01:intron
TGTCATAATGAGGTTCAATA+TGG 0.363868 8:+68970449 None:intergenic
TCCAACATGTTATAATCCTT+TGG 0.364236 8:+68971003 None:intergenic
CTTCAGCTAACTAACGCATT+TGG 0.368274 8:+68967832 None:intergenic
CCTGTTGCTCTTCATCAATC+TGG 0.370196 8:-68971519 MsG0880046096.01.T01:CDS
ACTTGGTTGAATTCTTGGTC+TGG 0.370346 8:+68971648 None:intergenic
AGTTGGTTACACTCAAATTT+GGG 0.376212 8:+68967874 None:intergenic
GGTGTTAGAGGTGTTCTTGA+TGG 0.391791 8:-68970330 MsG0880046096.01.T01:CDS
GTTGGTGTGTTTGTTACTAC+TGG 0.394063 8:-68971543 MsG0880046096.01.T01:CDS
GGCTCTGTCTTTGTGCATGA+TGG 0.401655 8:-68970169 MsG0880046096.01.T01:CDS
CTGAAAGCTCCTCCAGCAAC+TGG 0.405724 8:+68971411 None:intergenic
TTTATTTCCTATATCATAGC+TGG 0.406170 8:-68971486 MsG0880046096.01.T01:CDS
CCTTATAAGAGCCTACCTAT+TGG 0.406403 8:-68970237 MsG0880046096.01.T01:CDS
CCAAAAGGGATAGCTCCTTA+TGG 0.407325 8:-68970351 MsG0880046096.01.T01:CDS
CCTTAATATTGGTTGGAGTT+GGG 0.411834 8:-68968788 MsG0880046096.01.T01:CDS
ATAGCTCCTTATGGTGTTAG+AGG 0.412926 8:-68970342 MsG0880046096.01.T01:CDS
TGGTATGATCTTGTAGCTCT+TGG 0.419437 8:-68971585 MsG0880046096.01.T01:CDS
CCAGATTGATGAAGAGCAAC+AGG 0.428383 8:+68971519 None:intergenic
GCCGAGGAGATTGAGAATTT+GGG 0.430127 8:-68967915 MsG0880046096.01.T01:CDS
CACCAGACCTCTGCCTCACT+TGG 0.433168 8:+68971631 None:intergenic
GATTAGCATTGGCACGCTAA+TGG 0.433590 8:-68968348 MsG0880046096.01.T01:CDS
TGGTGGGGCAAATATACTAA+TGG 0.434674 8:-68971133 MsG0880046096.01.T01:CDS
GGGCAAGGCTTGTTCCATCT+TGG 0.436918 8:-68968669 MsG0880046096.01.T01:CDS
TTTGGATTCATCGTTGTGGC+TGG 0.438413 8:-68970408 MsG0880046096.01.T01:CDS
GAGAAAATAATCCCAATGTA+TGG 0.450687 8:-68971047 MsG0880046096.01.T01:CDS
AGGTGCAAGTTTAGGTATAG+TGG 0.451944 8:-68968746 MsG0880046096.01.T01:CDS
GAGCCTACCTATTGGAATAG+TGG 0.452705 8:-68970229 MsG0880046096.01.T01:CDS
ACTGAACCCACTATTCCAAT+AGG 0.453533 8:+68970222 None:intergenic
GCCAGATACCTTTGTGTCAT+GGG 0.453690 8:-68968694 MsG0880046096.01.T01:CDS
TATGATGCAGGAGAATTCTT+GGG 0.458515 8:-68971162 MsG0880046096.01.T01:intron
GATCTTGTAGCTCTTGGAGT+TGG 0.460545 8:-68971579 MsG0880046096.01.T01:CDS
AGTTATTTAAGATTAACATT+TGG 0.461337 8:-68971390 MsG0880046096.01.T01:intron
AGTTGGGCAAGCAACATTGT+TGG 0.465245 8:-68968772 MsG0880046096.01.T01:CDS
ATAATTGAGTTGATTAGCAT+TGG 0.467575 8:-68968359 MsG0880046096.01.T01:CDS
TGGCTTTCCTTAATATTGGT+TGG 0.469455 8:-68968795 MsG0880046096.01.T01:CDS
CTTGGAGTTGGAGGAATGCT+TGG 0.469596 8:-68971567 MsG0880046096.01.T01:CDS
TGGTGGGGTCTCTTACTCTT+CGG 0.470816 8:-68968182 MsG0880046096.01.T01:CDS
CTTGTAGCTCTTGGAGTTGG+AGG 0.471002 8:-68971576 MsG0880046096.01.T01:CDS
GCCAAAGTACATCCTTCAAC+AGG 0.471515 8:-68968643 MsG0880046096.01.T01:CDS
GTATGGAGAGTGGAAGTTCA+TGG 0.471951 8:-68971030 MsG0880046096.01.T01:CDS
TGTAACCAACTTACAAACTA+AGG 0.473407 8:-68967862 MsG0880046096.01.T01:CDS
TGTACAAGGTTGTTGTTACA+AGG 0.475149 8:+68968116 None:intergenic
CCAAACTATGGAGAAGCATA+AGG 0.477093 8:+68968220 None:intergenic
TTCCACCTTAGTTTGTAAGT+TGG 0.479933 8:+68967857 None:intergenic
ATATGACTGACCTTATTGTA+AGG 0.480341 8:+68970144 None:intergenic
GGTCTGGTGCAGACATGAAA+AGG 0.485575 8:-68971617 MsG0880046096.01.T01:CDS
ACTTCCACTCTCCATACATT+GGG 0.486802 8:+68971036 None:intergenic
CACGCTAATGGTGTTCTACA+TGG 0.494994 8:-68968336 MsG0880046096.01.T01:CDS
AACCAAGTGAGGCAGAGGTC+TGG 0.496317 8:-68971633 MsG0880046096.01.T01:CDS
TCTCAAATGCTGCTGTAGCT+AGG 0.500116 8:-68971101 MsG0880046096.01.T01:CDS
AGCCTACCTATTGGAATAGT+GGG 0.500222 8:-68970228 MsG0880046096.01.T01:CDS
GCCTGTTGAAGGATGTACTT+TGG 0.501517 8:+68968642 None:intergenic
GTTGGAGGAATGCTTGGTGT+TGG 0.502228 8:-68971561 MsG0880046096.01.T01:CDS
GGAAATTCAAACAGCAATGG+TGG 0.509718 8:-68968199 MsG0880046096.01.T01:CDS
AGAACACCTCTAACACCATA+AGG 0.511059 8:+68970336 None:intergenic
TGATATTCCAGCTATGATAT+AGG 0.513325 8:+68971479 None:intergenic
GAAGGTGGCCATGGCATGAA+TGG 0.513555 8:+68968065 None:intergenic
GCAAGCAACATTGTTGGAGC+AGG 0.513760 8:-68968766 MsG0880046096.01.T01:CDS
AGAGAAAGCATCATATTCAA+TGG 0.515624 8:-68968815 MsG0880046096.01.T01:CDS
AAGTGAGGGAGAGAAGAAAG+AGG 0.516262 8:+68968243 None:intergenic
AACTTCCACTCTCCATACAT+TGG 0.516853 8:+68971035 None:intergenic
AAAACTTGGTTAATCCAAAA+GGG 0.521490 8:-68970365 MsG0880046096.01.T01:CDS
GCCAAAGGATTATAACATGT+TGG 0.521646 8:-68971004 MsG0880046096.01.T01:CDS
AACCATGGCTGAGGAGGTCA+AGG 0.523071 8:-68970262 MsG0880046096.01.T01:CDS
GAAATTCAAACAGCAATGGT+GGG 0.526735 8:-68968198 MsG0880046096.01.T01:CDS
AGAAGAATGAGAGCTACTGC+TGG 0.527933 8:+68970976 None:intergenic
ATGGACATTGAAGGTGGCCA+TGG 0.537476 8:+68968056 None:intergenic
AGCCAGATACCTTTGTGTCA+TGG 0.541144 8:-68968695 MsG0880046096.01.T01:CDS
GAGCATATTCTTGTTGTACA+AGG 0.543125 8:+68968102 None:intergenic
AGCTTCAACCATGGCTGAGG+AGG 0.545111 8:-68970268 MsG0880046096.01.T01:CDS
TGCACAAAGACAGAGCCATT+AGG 0.546466 8:+68970175 None:intergenic
GTGTGTGTAAAGGCGGTGTA+TGG 0.548779 8:+68968273 None:intergenic
AACAAGAATATGCTCAATGT+TGG 0.550044 8:-68968094 MsG0880046096.01.T01:CDS
ATCCTTGACCTCCTCAGCCA+TGG 0.551869 8:+68970260 None:intergenic
GATGATTGATTTCAGTACAA+AGG 0.552981 8:-68970478 MsG0880046096.01.T01:intron
TTCAGCTTCAACCATGGCTG+AGG 0.555396 8:-68970271 MsG0880046096.01.T01:CDS
TTCAATGGAGTGCCTGTTGA+AGG 0.556143 8:+68968631 None:intergenic
GGAGAAGCATAAGGAAGTGA+GGG 0.556959 8:+68968229 None:intergenic
GATACCTTTGTGTCATGGGA+AGG 0.563239 8:-68968690 MsG0880046096.01.T01:CDS
TTGAGGAAGATGGACATTGA+AGG 0.567242 8:+68968047 None:intergenic
ACCCAAATTCTCAATCTCCT+CGG 0.568939 8:+68967914 None:intergenic
TGGAGAAGCATAAGGAAGTG+AGG 0.569100 8:+68968228 None:intergenic
AATTCAACCAAGTGAGGCAG+AGG 0.569150 8:-68971638 MsG0880046096.01.T01:CDS
TTTGGAAATTCAAACAGCAA+TGG 0.571143 8:-68968202 MsG0880046096.01.T01:CDS
TGTACTTTGGCTAACCAAGA+TGG 0.571883 8:+68968655 None:intergenic
TACCGTCGCTATGTAATCAT+CGG 0.577579 8:-68968296 MsG0880046096.01.T01:CDS
ATGACCATATAGCAAAGCGT+TGG 0.577715 8:+68967988 None:intergenic
CTATGATTCAGCTTCAACCA+TGG 0.580237 8:-68970277 MsG0880046096.01.T01:CDS
ATACCTTTGTGTCATGGGAA+GGG 0.590763 8:-68968689 MsG0880046096.01.T01:CDS
TAATCCCAATGTATGGAGAG+TGG 0.592516 8:-68971040 MsG0880046096.01.T01:CDS
CATGGAACACTGTCATAATG+AGG 0.594067 8:+68970439 None:intergenic
GTTGTGGCTGGTTATTACAA+TGG 0.594223 8:-68970396 MsG0880046096.01.T01:CDS
GTTCAAGTTCCAGTTGCTGG+AGG 0.596218 8:-68971420 MsG0880046096.01.T01:CDS
GGAAAAGAATGCTAGCAACA+TGG 0.601745 8:-68971674 None:intergenic
TGTTACAAGGCACCATGTGT+TGG 0.603576 8:+68968129 None:intergenic
AGGAACAAAAGTGTGTGTAA+AGG 0.603696 8:+68968263 None:intergenic
GGAAGTTCATGGATTGCCAA+AGG 0.604127 8:-68971019 MsG0880046096.01.T01:CDS
TTTGGGTGGTGTTAATCAAG+TGG 0.606482 8:-68967898 MsG0880046096.01.T01:CDS
GGTATGTGCCATTCATGCCA+TGG 0.610730 8:-68968073 MsG0880046096.01.T01:CDS
TTTCTTTGGATTCATCGTTG+TGG 0.629846 8:-68970412 MsG0880046096.01.T01:CDS
TGGGGTCTCTTACTCTTCGG+TGG 0.630179 8:-68968179 MsG0880046096.01.T01:CDS
AACAAAAGTGTGTGTAAAGG+CGG 0.630640 8:+68968266 None:intergenic
ACCAAGAATTCAACCAAGTG+AGG 0.631416 8:-68971644 MsG0880046096.01.T01:CDS
ATATAGGAAATAAAGACTGA+AGG 0.634540 8:+68971495 None:intergenic
AAATTCAAACAGCAATGGTG+GGG 0.636518 8:-68968197 MsG0880046096.01.T01:CDS
AACCAACTTACAAACTAAGG+TGG 0.646197 8:-68967859 MsG0880046096.01.T01:CDS
GAGGAGATTGAGAATTTGGG+TGG 0.655023 8:-68967912 MsG0880046096.01.T01:CDS
ACCATAAAGCACATAAAACA+TGG 0.658020 8:+68967956 None:intergenic
AGGAAGATGGACATTGAAGG+TGG 0.658680 8:+68968050 None:intergenic
TTTGTGTCATGGGAAGGGCA+AGG 0.658768 8:-68968684 MsG0880046096.01.T01:CDS
TTGCCCTTCCCATGACACAA+AGG 0.659610 8:+68968686 None:intergenic
GGCCGATGATTACATAGCGA+CGG 0.666130 8:+68968294 None:intergenic
TCACTCTACGTATCAAGCCG+AGG 0.689681 8:-68967931 MsG0880046096.01.T01:CDS
TGAATCCAAAGAAAATCACA+TGG 0.692143 8:+68970421 None:intergenic
TATGACACAAGCAAAGAGTG+AGG 0.719524 8:+68970953 None:intergenic
AACCCACTATTCCAATAGGT+AGG 0.722428 8:+68970226 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAGGAAAATAA+TGG - Chr8:68970264-68970283 MsG0880046096.01.T01:CDS 10.0%
!! AAAAAAAAAAGGAAAATAAT+GGG - Chr8:68970265-68970284 MsG0880046096.01.T01:CDS 10.0%
!! AAGAATGATAATTATTTATT+TGG + Chr8:68969003-68969022 None:intergenic 10.0%
!! ATATTCAAAATTGTAAATAA+TGG + Chr8:68968928-68968947 None:intergenic 10.0%
!!! AAATTTTCAAAAATATTTGA+TGG + Chr8:68970936-68970955 None:intergenic 10.0%
!!! AATTTAAAACTATACTAATT+AGG - Chr8:68968789-68968808 MsG0880046096.01.T01:CDS 10.0%
!!! ATATTTTGTCAAAAAAAAAT+TGG + Chr8:68969980-68969999 None:intergenic 10.0%
!!! ATTATTTTCCTTTTTTTTTT+TGG + Chr8:68970265-68970284 None:intergenic 10.0%
!!! TATAAAATTTAATGGATAAT+TGG - Chr8:68970303-68970322 MsG0880046096.01.T01:CDS 10.0%
!!! TTAAATTTTTTGATTAAATG+TGG - Chr8:68970166-68970185 MsG0880046096.01.T01:CDS 10.0%
!! TGAATGTATAATTACTAAAA+TGG - Chr8:68969812-68969831 MsG0880046096.01.T01:intron 15.0%
!! TTTAATTCAAATACATTGTT+AGG + Chr8:68969503-68969522 None:intergenic 15.0%
!!! AGTTATTTAAGATTAACATT+TGG - Chr8:68968118-68968137 MsG0880046096.01.T01:CDS 15.0%
!!! ATTAGTATAGTTTTAAATTG+TGG + Chr8:68968788-68968807 None:intergenic 15.0%
!!! TACAATTTTGAATATTTAAC+TGG - Chr8:68968933-68968952 MsG0880046096.01.T01:intron 15.0%
!! ACTATACTAATTAGGTTAAT+TGG - Chr8:68968797-68968816 MsG0880046096.01.T01:CDS 20.0%
!! ATAGTGTACTTTAGTTATAT+AGG - Chr8:68969208-68969227 MsG0880046096.01.T01:intron 20.0%
!! ATATCAAACTAAAAAACAGA+AGG + Chr8:68968621-68968640 None:intergenic 20.0%
!! CATAGCTATATACAAATAAA+TGG - Chr8:68969836-68969855 MsG0880046096.01.T01:intron 20.0%
!! CTATACTAATTAGGTTAATT+GGG - Chr8:68968798-68968817 MsG0880046096.01.T01:CDS 20.0%
!! TAGTTAATTGTCTTATCTTT+GGG - Chr8:68970983-68971002 MsG0880046096.01.T01:CDS 20.0%
!! TATACTAATTAGGTTAATTG+GGG - Chr8:68968799-68968818 MsG0880046096.01.T01:CDS 20.0%
!! TATTTGAATTAAATACGTCT+AGG - Chr8:68969510-68969529 MsG0880046096.01.T01:intron 20.0%
!! TGAAAGAATTGATATATGTT+TGG - Chr8:68969722-68969741 MsG0880046096.01.T01:intron 20.0%
!! TGTATAAAATATCCAAAACT+TGG - Chr8:68970101-68970120 MsG0880046096.01.T01:intron 20.0%
!! TTAAATACAAACCAAAATGA+AGG - Chr8:68970198-68970217 MsG0880046096.01.T01:CDS 20.0%
!! TTAGTTAATTGTCTTATCTT+TGG - Chr8:68970982-68971001 MsG0880046096.01.T01:CDS 20.0%
!! TTATTAGTTGAACAATGAAT+TGG - Chr8:68969601-68969620 MsG0880046096.01.T01:intron 20.0%
!!! AAGCTATATATTCTTTGAAA+TGG - Chr8:68970658-68970677 MsG0880046096.01.T01:intron 20.0%
!!! CTTGACCATAAATATTTTTT+GGG - Chr8:68970129-68970148 MsG0880046096.01.T01:intron 20.0%
!!! GAACTGTATTTTTTCTTTTT+TGG + Chr8:68970068-68970087 None:intergenic 20.0%
!!! TATGTTAGTATTTTTCTTCA+GGG + Chr8:68969543-68969562 None:intergenic 20.0%
!!! TCTTGACCATAAATATTTTT+TGG - Chr8:68970128-68970147 MsG0880046096.01.T01:intron 20.0%
!!! TGTTTTTTATAATGAAAGGA+TGG - Chr8:68968889-68968908 MsG0880046096.01.T01:intron 20.0%
!!! TTATGTTAGTATTTTTCTTC+AGG + Chr8:68969544-68969563 None:intergenic 20.0%
!!! TTGACCATAAATATTTTTTG+GGG - Chr8:68970130-68970149 MsG0880046096.01.T01:intron 20.0%
!!! TTGGTGTTTTTTATAATGAA+AGG - Chr8:68968885-68968904 MsG0880046096.01.T01:intron 20.0%
!!! TTTAGTTTGATATTGTATCA+AGG - Chr8:68968628-68968647 MsG0880046096.01.T01:CDS 20.0%
! AAAAACTTGGTTAATCCAAA+AGG - Chr8:68969142-68969161 MsG0880046096.01.T01:intron 25.0%
! AAAACTTGGTTAATCCAAAA+GGG - Chr8:68969143-68969162 MsG0880046096.01.T01:intron 25.0%
! AAATGAAGGAGAATTGATAA+AGG - Chr8:68970212-68970231 MsG0880046096.01.T01:CDS 25.0%
! AACTTTACTTTATTGCCTAA+TGG - Chr8:68969318-68969337 MsG0880046096.01.T01:intron 25.0%
! AATTCAAATACATTGTTAGG+CGG + Chr8:68969500-68969519 None:intergenic 25.0%
! ACATGAAAAGGAAACTTAAT+TGG - Chr8:68967903-68967922 MsG0880046096.01.T01:CDS 25.0%
! AGGACAATAAAGGAAAATAA+TGG - Chr8:68970232-68970251 MsG0880046096.01.T01:CDS 25.0%
! AGTTAATTGTCTTATCTTTG+GGG - Chr8:68970984-68971003 MsG0880046096.01.T01:CDS 25.0%
! ATATAAATTACGTGTGTGTT+TGG - Chr8:68969630-68969649 MsG0880046096.01.T01:intron 25.0%
! ATATAGGAAATAAAGACTGA+AGG + Chr8:68968016-68968035 None:intergenic 25.0%
! CTTCAAAATCCTTTATATTG+CGG - Chr8:68968755-68968774 MsG0880046096.01.T01:CDS 25.0%
! GAATTGATAAAGGACAATAA+AGG - Chr8:68970222-68970241 MsG0880046096.01.T01:CDS 25.0%
! GGACAATAAAGGAAAATAAT+GGG - Chr8:68970233-68970252 MsG0880046096.01.T01:CDS 25.0%
! TAAAGAGAATGAATGTTGTT+TGG - Chr8:68969766-68969785 MsG0880046096.01.T01:intron 25.0%
! TTAGCCCCAAAAAATATTTA+TGG + Chr8:68970137-68970156 None:intergenic 25.0%
! TTTATTTCCTATATCATAGC+TGG - Chr8:68968022-68968041 MsG0880046096.01.T01:CDS 25.0%
!! AAGTTAAATAATAATGGAGC+TGG - Chr8:68970039-68970058 MsG0880046096.01.T01:intron 25.0%
!! TTATCAATTCTCCTTCATTT+TGG + Chr8:68970212-68970231 None:intergenic 25.0%
!! TTTTGGATTAACCAAGTTTT+TGG + Chr8:68969143-68969162 None:intergenic 25.0%
!!! AATATTTTTTGGGGCTAATT+TGG - Chr8:68970139-68970158 MsG0880046096.01.T01:intron 25.0%
!!! AATTGCCTTTTTCAATTTTG+AGG - Chr8:68970421-68970440 MsG0880046096.01.T01:CDS 25.0%
!!! ATAATTGAGTTGATTAGCAT+TGG - Chr8:68971149-68971168 MsG0880046096.01.T01:CDS 25.0%
!!! GAATATTTGAGTTTTGCTTT+TGG - Chr8:68968439-68968458 MsG0880046096.01.T01:intron 25.0%
AAAAACTGTGATTGTGATCA+TGG + Chr8:68971357-68971376 None:intergenic 30.0%
AACAAGAATATGCTCAATGT+TGG - Chr8:68971414-68971433 MsG0880046096.01.T01:CDS 30.0%
AATATCCACCCAATGAAATA+AGG + Chr8:68968827-68968846 None:intergenic 30.0%
ACCATAAAGCACATAAAACA+TGG + Chr8:68971555-68971574 None:intergenic 30.0%
AGTTGGTTACACTCAAATTT+GGG + Chr8:68971637-68971656 None:intergenic 30.0%
ATATGACTGACCTTATTGTA+AGG + Chr8:68969367-68969386 None:intergenic 30.0%
ATCAATTCATTTATTGACGC+AGG - Chr8:68971083-68971102 MsG0880046096.01.T01:CDS 30.0%
CTGTTTGAATTTCCAAACTA+TGG + Chr8:68971303-68971322 None:intergenic 30.0%
GAGAAAATAATCCCAATGTA+TGG - Chr8:68968461-68968480 MsG0880046096.01.T01:intron 30.0%
GGTGTTCACCAAAAAAAAAA+AGG - Chr8:68970254-68970273 MsG0880046096.01.T01:CDS 30.0%
TAGAGCCTCAAAATTGAAAA+AGG + Chr8:68970429-68970448 None:intergenic 30.0%
TAGTCATGAGAAAAACATTG+AGG + Chr8:68971481-68971500 None:intergenic 30.0%
TCAATGGCTTTCCTTAATAT+TGG - Chr8:68970709-68970728 MsG0880046096.01.T01:intron 30.0%
TCCAACATGTTATAATCCTT+TGG + Chr8:68968508-68968527 None:intergenic 30.0%
TGAATCCAAAGAAAATCACA+TGG + Chr8:68969090-68969109 None:intergenic 30.0%
TGATATTCCAGCTATGATAT+AGG + Chr8:68968032-68968051 None:intergenic 30.0%
TGCAAAATGCGAAAAAAATG+TGG - Chr8:68968692-68968711 MsG0880046096.01.T01:CDS 30.0%
TGTAACCAACTTACAAACTA+AGG - Chr8:68971646-68971665 MsG0880046096.01.T01:CDS 30.0%
TGTCATAATGAGGTTCAATA+TGG + Chr8:68969062-68969081 None:intergenic 30.0%
TTAATTGCTTTACCTCTAGA+AGG + Chr8:68970538-68970557 None:intergenic 30.0%
TTTGGAAATTCAAACAGCAA+TGG - Chr8:68971306-68971325 MsG0880046096.01.T01:intron 30.0%
! AAAAAGATAGTGGCATTCAA+TGG + Chr8:68970895-68970914 None:intergenic 30.0%
! AAGGCAATTTTTCACATGTT+TGG + Chr8:68970410-68970429 None:intergenic 30.0%
! AAGTTGGTTACACTCAAATT+TGG + Chr8:68971638-68971657 None:intergenic 30.0%
! ACCATGTTTTATGTGCTTTA+TGG - Chr8:68971551-68971570 MsG0880046096.01.T01:CDS 30.0%
! ATTGAATGCCACTATCTTTT+TGG - Chr8:68970894-68970913 MsG0880046096.01.T01:intron 30.0%
! GATGATTGATTTCAGTACAA+AGG - Chr8:68969030-68969049 MsG0880046096.01.T01:intron 30.0%
! TTCTAGTTAACTCAAAAGCT+AGG - Chr8:68970326-68970345 MsG0880046096.01.T01:CDS 30.0%
! TTGAATGCCACTATCTTTTT+GGG - Chr8:68970895-68970914 MsG0880046096.01.T01:intron 30.0%
!! AGAGAAAGCATCATATTCAA+TGG - Chr8:68970693-68970712 MsG0880046096.01.T01:intron 30.0%
!! GAATATTTAACTGGCTTTAG+TGG - Chr8:68968942-68968961 MsG0880046096.01.T01:intron 30.0%
!!! AATTCTTGGGATATTTTGGT+GGG - Chr8:68968359-68968378 MsG0880046096.01.T01:CDS 30.0%
!!! TCTTTTTTTGCTTATGATGC+AGG - Chr8:68968334-68968353 MsG0880046096.01.T01:CDS 30.0%
AAATTCAAACAGCAATGGTG+GGG - Chr8:68971311-68971330 MsG0880046096.01.T01:intron 35.0%
AACCAACTTACAAACTAAGG+TGG - Chr8:68971649-68971668 MsG0880046096.01.T01:CDS 35.0%
CATGATGGTTCCTTACAATA+AGG - Chr8:68969354-68969373 MsG0880046096.01.T01:intron 35.0%
CGAAAAAAATGTGGTTGACA+TGG - Chr8:68968701-68968720 MsG0880046096.01.T01:CDS 35.0%
CTAGTTAGAATTCCTTCTAG+AGG - Chr8:68970523-68970542 MsG0880046096.01.T01:intron 35.0%
GAAATTCAAACAGCAATGGT+GGG - Chr8:68971310-68971329 MsG0880046096.01.T01:intron 35.0%
GAGAAAAACATTGAGGAAGA+TGG + Chr8:68971474-68971493 None:intergenic 35.0%
GCCAAAGGATTATAACATGT+TGG - Chr8:68968504-68968523 MsG0880046096.01.T01:intron 35.0%
TAGAATAAGCTGAACCAAAC+AGG - Chr8:68970465-68970484 MsG0880046096.01.T01:CDS 35.0%
TATGATGCAGGAGAATTCTT+GGG - Chr8:68968346-68968365 MsG0880046096.01.T01:CDS 35.0%
TCAAGCTCTTATCATTAAGC+CGG + Chr8:68971012-68971031 None:intergenic 35.0%
TGGCTTTCCTTAATATTGGT+TGG - Chr8:68970713-68970732 MsG0880046096.01.T01:intron 35.0%
TTATGATGCAGGAGAATTCT+TGG - Chr8:68968345-68968364 MsG0880046096.01.T01:CDS 35.0%
TTGCTTACCCAAAAAGATAG+TGG + Chr8:68970905-68970924 None:intergenic 35.0%
TTTCTTTGGATTCATCGTTG+TGG - Chr8:68969096-68969115 MsG0880046096.01.T01:intron 35.0%
! AACAAAAGTGTGTGTAAAGG+CGG + Chr8:68971245-68971264 None:intergenic 35.0%
! AGGAACAAAAGTGTGTGTAA+AGG + Chr8:68971248-68971267 None:intergenic 35.0%
! ATTGGGGAACCTTATTTCAT+TGG - Chr8:68968815-68968834 MsG0880046096.01.T01:CDS 35.0%
! CCTTAATATTGGTTGGAGTT+GGG - Chr8:68970720-68970739 MsG0880046096.01.T01:intron 35.0%
! GAGCATATTCTTGTTGTACA+AGG + Chr8:68971409-68971428 None:intergenic 35.0%
! GGAGAATTCTTGGGATATTT+TGG - Chr8:68968355-68968374 MsG0880046096.01.T01:CDS 35.0%
! GTGTTCCATGTGATTTTCTT+TGG - Chr8:68969082-68969101 MsG0880046096.01.T01:intron 35.0%
! TCCTTAATATTGGTTGGAGT+TGG - Chr8:68970719-68970738 MsG0880046096.01.T01:intron 35.0%
! TCTCTTCTAGTTGCAATGTT+AGG - Chr8:68970787-68970806 MsG0880046096.01.T01:intron 35.0%
! TGTACAAGGTTGTTGTTACA+AGG + Chr8:68971395-68971414 None:intergenic 35.0%
! TTGGGGAACCTTATTTCATT+GGG - Chr8:68968816-68968835 MsG0880046096.01.T01:CDS 35.0%
!! CAATGGAAGTACCAAAAACT+TGG - Chr8:68969129-68969148 MsG0880046096.01.T01:intron 35.0%
!! GAATTCTTGGGATATTTTGG+TGG - Chr8:68968358-68968377 MsG0880046096.01.T01:CDS 35.0%
!! TTCCACCTTAGTTTGTAAGT+TGG + Chr8:68971654-68971673 None:intergenic 35.0%
!!! ATTCTTGGGATATTTTGGTG+GGG - Chr8:68968360-68968379 MsG0880046096.01.T01:CDS 35.0%
!!! CACAGTTTTTTTCCAACACA+TGG - Chr8:68971367-68971386 MsG0880046096.01.T01:intron 35.0%
!!! TTGGAAAGAGAGTGTTTTGA+GGG + Chr8:68971504-68971523 None:intergenic 35.0%
AACCCACTATTCCAATAGGT+AGG + Chr8:68969285-68969304 None:intergenic 40.0%
AACTTCCACTCTCCATACAT+TGG + Chr8:68968476-68968495 None:intergenic 40.0%
ACCAAGAATTCAACCAAGTG+AGG - Chr8:68967864-68967883 MsG0880046096.01.T01:CDS 40.0%
ACCCAAATTCTCAATCTCCT+CGG + Chr8:68971597-68971616 None:intergenic 40.0%
ACTGAACCCACTATTCCAAT+AGG + Chr8:68969289-68969308 None:intergenic 40.0%
ACTTCCACTCTCCATACATT+GGG + Chr8:68968475-68968494 None:intergenic 40.0%
ACTTGGTTGAATTCTTGGTC+TGG + Chr8:68967863-68967882 None:intergenic 40.0%
AGAACACCTCTAACACCATA+AGG + Chr8:68969175-68969194 None:intergenic 40.0%
AGCCTACCTATTGGAATAGT+GGG - Chr8:68969280-68969299 MsG0880046096.01.T01:intron 40.0%
AGGTGCAAGTTTAGGTATAG+TGG - Chr8:68970762-68970781 MsG0880046096.01.T01:intron 40.0%
ATACCTTTGTGTCATGGGAA+GGG - Chr8:68970819-68970838 MsG0880046096.01.T01:intron 40.0%
ATGACCATATAGCAAAGCGT+TGG + Chr8:68971523-68971542 None:intergenic 40.0%
CATGGAACACTGTCATAATG+AGG + Chr8:68969072-68969091 None:intergenic 40.0%
CCAATAGGTAGGCTCTTATA+AGG + Chr8:68969274-68969293 None:intergenic 40.0%
CCCAACTCCAACCAATATTA+AGG + Chr8:68970723-68970742 None:intergenic 40.0%
CCTTATAAGAGCCTACCTAT+TGG - Chr8:68969271-68969290 MsG0880046096.01.T01:intron 40.0%
CCTTATGCTTCTCCATAGTT+TGG - Chr8:68971288-68971307 MsG0880046096.01.T01:intron 40.0%
CTATGATTCAGCTTCAACCA+TGG - Chr8:68969231-68969250 MsG0880046096.01.T01:intron 40.0%
CTCTTCTGCAAAAGCTATTC+TGG + Chr8:68970366-68970385 None:intergenic 40.0%
GGAAATTCAAACAGCAATGG+TGG - Chr8:68971309-68971328 MsG0880046096.01.T01:intron 40.0%
TAATCCCAATGTATGGAGAG+TGG - Chr8:68968468-68968487 MsG0880046096.01.T01:intron 40.0%
TACCGTCGCTATGTAATCAT+CGG - Chr8:68971212-68971231 MsG0880046096.01.T01:intron 40.0%
TATGACACAAGCAAAGAGTG+AGG + Chr8:68968558-68968577 None:intergenic 40.0%
TCACTCTTTGCTTGTGTCAT+AGG - Chr8:68968557-68968576 MsG0880046096.01.T01:intron 40.0%
TGGTATGATCTTGTAGCTCT+TGG - Chr8:68967923-68967942 MsG0880046096.01.T01:CDS 40.0%
TGGTGGGGCAAATATACTAA+TGG - Chr8:68968375-68968394 MsG0880046096.01.T01:CDS 40.0%
TGTACTTTGGCTAACCAAGA+TGG + Chr8:68970856-68970875 None:intergenic 40.0%
TGTGACAGCTAACACAAACT+TGG - Chr8:68968866-68968885 MsG0880046096.01.T01:intron 40.0%
TTGAGGAAGATGGACATTGA+AGG + Chr8:68971464-68971483 None:intergenic 40.0%
! ATAGCTCCTTATGGTGTTAG+AGG - Chr8:68969166-68969185 MsG0880046096.01.T01:intron 40.0%
! ATTCTAGTTACGAGCCTGTT+TGG + Chr8:68970482-68970501 None:intergenic 40.0%
! CCAAACTATGGAGAAGCATA+AGG + Chr8:68971291-68971310 None:intergenic 40.0%
! CTTTCCAACGCTTTGCTATA+TGG - Chr8:68971516-68971535 MsG0880046096.01.T01:CDS 40.0%
! GGTCAAGAGTTACCAAGTTT+TGG + Chr8:68970116-68970135 None:intergenic 40.0%
! GTTGGTGTGTTTGTTACTAC+TGG - Chr8:68967965-68967984 MsG0880046096.01.T01:CDS 40.0%
! GTTGTGGCTGGTTATTACAA+TGG - Chr8:68969112-68969131 MsG0880046096.01.T01:intron 40.0%
! TTTGGGTGGTGTTAATCAAG+TGG - Chr8:68971610-68971629 MsG0880046096.01.T01:CDS 40.0%
!! TTGTCTTATCTTTGGGGTTC+CGG - Chr8:68970990-68971009 MsG0880046096.01.T01:CDS 40.0%
!!! GGATTTTGAAGTCTCTGCAA+CGG + Chr8:68968746-68968765 None:intergenic 40.0%
!!! GTTGGAAAGAGAGTGTTTTG+AGG + Chr8:68971505-68971524 None:intergenic 40.0%
AAAGACGTGTCCAACACGTT+TGG - Chr8:68968199-68968218 MsG0880046096.01.T01:CDS 45.0%
AAGACGTGTCCAACACGTTT+GGG - Chr8:68968200-68968219 MsG0880046096.01.T01:CDS 45.0%
AAGTGAGGGAGAGAAGAAAG+AGG + Chr8:68971268-68971287 None:intergenic 45.0%
AATTCAACCAAGTGAGGCAG+AGG - Chr8:68967870-68967889 MsG0880046096.01.T01:CDS 45.0%
AGAAGAATGAGAGCTACTGC+TGG + Chr8:68968535-68968554 None:intergenic 45.0%
AGCCAGATACCTTTGTGTCA+TGG - Chr8:68970813-68970832 MsG0880046096.01.T01:intron 45.0%
AGCCGAGGAGATTGAGAATT+TGG - Chr8:68971592-68971611 MsG0880046096.01.T01:CDS 45.0%
AGGAAGATGGACATTGAAGG+TGG + Chr8:68971461-68971480 None:intergenic 45.0%
AGTTGGGCAAGCAACATTGT+TGG - Chr8:68970736-68970755 MsG0880046096.01.T01:intron 45.0%
CACGCTAATGGTGTTCTACA+TGG - Chr8:68971172-68971191 MsG0880046096.01.T01:intron 45.0%
CCAAAAGGGATAGCTCCTTA+TGG - Chr8:68969157-68969176 MsG0880046096.01.T01:intron 45.0%
CCAGATTGATGAAGAGCAAC+AGG + Chr8:68967992-68968011 None:intergenic 45.0%
CCTGTTGCTCTTCATCAATC+TGG - Chr8:68967989-68968008 MsG0880046096.01.T01:CDS 45.0%
GAGCCTACCTATTGGAATAG+TGG - Chr8:68969279-68969298 MsG0880046096.01.T01:intron 45.0%
GAGGAGATTGAGAATTTGGG+TGG - Chr8:68971596-68971615 MsG0880046096.01.T01:CDS 45.0%
GATACCTTTGTGTCATGGGA+AGG - Chr8:68970818-68970837 MsG0880046096.01.T01:intron 45.0%
GATCTTGTAGCTCTTGGAGT+TGG - Chr8:68967929-68967948 MsG0880046096.01.T01:CDS 45.0%
GCCAAAGTACATCCTTCAAC+AGG - Chr8:68970865-68970884 MsG0880046096.01.T01:intron 45.0%
GCCAGATACCTTTGTGTCAT+GGG - Chr8:68970814-68970833 MsG0880046096.01.T01:intron 45.0%
GCCGAGGAGATTGAGAATTT+GGG - Chr8:68971593-68971612 MsG0880046096.01.T01:CDS 45.0%
GCCTCACTTGGTTGAATTCT+TGG + Chr8:68967868-68967887 None:intergenic 45.0%
GCCTGTTGAAGGATGTACTT+TGG + Chr8:68970869-68970888 None:intergenic 45.0%
GGTCTGCAACCGCAATATAA+AGG + Chr8:68968767-68968786 None:intergenic 45.0%
GTATGGAGAGTGGAAGTTCA+TGG - Chr8:68968478-68968497 MsG0880046096.01.T01:intron 45.0%
TCTCAAATGCTGCTGTAGCT+AGG - Chr8:68968407-68968426 MsG0880046096.01.T01:intron 45.0%
TGCACAAAGACAGAGCCATT+AGG + Chr8:68969336-68969355 None:intergenic 45.0%
TTTGGATTCATCGTTGTGGC+TGG - Chr8:68969100-68969119 MsG0880046096.01.T01:intron 45.0%
! CCATAAGGAGCTATCCCTTT+TGG + Chr8:68969160-68969179 None:intergenic 45.0%
! GGAAGTTCATGGATTGCCAA+AGG - Chr8:68968489-68968508 MsG0880046096.01.T01:intron 45.0%
! GGAGAAGCATAAGGAAGTGA+GGG + Chr8:68971282-68971301 None:intergenic 45.0%
! GGGAACCTTATTTCATTGGG+TGG - Chr8:68968819-68968838 MsG0880046096.01.T01:CDS 45.0%
! GTGTGTGTTTGGTTCAGCTT+TGG - Chr8:68969641-68969660 MsG0880046096.01.T01:intron 45.0%
! TGGAGAAGCATAAGGAAGTG+AGG + Chr8:68971283-68971302 None:intergenic 45.0%
! TGTTACAAGGCACCATGTGT+TGG + Chr8:68971382-68971401 None:intergenic 45.0%
! TTCAATGGAGTGCCTGTTGA+AGG + Chr8:68970880-68970899 None:intergenic 45.0%
!! GATTAGCATTGGCACGCTAA+TGG - Chr8:68971160-68971179 MsG0880046096.01.T01:intron 45.0%
!! GGTGTTAGAGGTGTTCTTGA+TGG - Chr8:68969178-68969197 MsG0880046096.01.T01:intron 45.0%
!! TCCCATGACACAAAGGTATC+TGG + Chr8:68970818-68970837 None:intergenic 45.0%
!! AATCAAAATATAAAATTTAA+TGG - Chr8:68970295-68970314 MsG0880046096.01.T01:CDS 5.0%
!!! ATATTTAAGTTAAATAATAA+TGG - Chr8:68970033-68970052 MsG0880046096.01.T01:intron 5.0%
ATGGACATTGAAGGTGGCCA+TGG + Chr8:68971455-68971474 None:intergenic 50.0%
CTGTCCAAACCCAAACGTGT+TGG + Chr8:68968212-68968231 None:intergenic 50.0%
CTTGGAGTTGGAGGAATGCT+TGG - Chr8:68967941-68967960 MsG0880046096.01.T01:CDS 50.0%
CTTGTAGCTCTTGGAGTTGG+AGG - Chr8:68967932-68967951 MsG0880046096.01.T01:CDS 50.0%
GCAAGCAACATTGTTGGAGC+AGG - Chr8:68970742-68970761 MsG0880046096.01.T01:intron 50.0%
GGCCGATGATTACATAGCGA+CGG + Chr8:68971217-68971236 None:intergenic 50.0%
GGCTCTGTCTTTGTGCATGA+TGG - Chr8:68969339-68969358 MsG0880046096.01.T01:intron 50.0%
GGTCTGGTGCAGACATGAAA+AGG - Chr8:68967891-68967910 MsG0880046096.01.T01:CDS 50.0%
GTGTGTGTAAAGGCGGTGTA+TGG + Chr8:68971238-68971257 None:intergenic 50.0%
GTTGGAGCAGGTGCAAGTTT+AGG - Chr8:68970754-68970773 MsG0880046096.01.T01:intron 50.0%
TCACTCTACGTATCAAGCCG+AGG - Chr8:68971577-68971596 MsG0880046096.01.T01:CDS 50.0%
TGGTGGGGTCTCTTACTCTT+CGG - Chr8:68971326-68971345 MsG0880046096.01.T01:intron 50.0%
TTCAGCTTCAACCATGGCTG+AGG - Chr8:68969237-68969256 MsG0880046096.01.T01:intron 50.0%
TTGCCCTTCCCATGACACAA+AGG + Chr8:68970825-68970844 None:intergenic 50.0%
TTTGTGTCATGGGAAGGGCA+AGG - Chr8:68970824-68970843 MsG0880046096.01.T01:intron 50.0%
! GCAGTTCAAGTTCCAGTTGC+TGG - Chr8:68968085-68968104 MsG0880046096.01.T01:CDS 50.0%
! GGTATGTGCCATTCATGCCA+TGG - Chr8:68971435-68971454 MsG0880046096.01.T01:CDS 50.0%
! GTGTCCAACACGTTTGGGTT+TGG - Chr8:68968205-68968224 MsG0880046096.01.T01:CDS 50.0%
! GTTCAAGTTCCAGTTGCTGG+AGG - Chr8:68968088-68968107 MsG0880046096.01.T01:CDS 50.0%
!! GTTGGAGGAATGCTTGGTGT+TGG - Chr8:68967947-68967966 MsG0880046096.01.T01:CDS 50.0%
AACCAAGTGAGGCAGAGGTC+TGG - Chr8:68967875-68967894 MsG0880046096.01.T01:CDS 55.0%
AACCATGGCTGAGGAGGTCA+AGG - Chr8:68969246-68969265 MsG0880046096.01.T01:intron 55.0%
AGCTTCAACCATGGCTGAGG+AGG - Chr8:68969240-68969259 MsG0880046096.01.T01:intron 55.0%
ATCCTTGACCTCCTCAGCCA+TGG + Chr8:68969251-68969270 None:intergenic 55.0%
CTGAAAGCTCCTCCAGCAAC+TGG + Chr8:68968100-68968119 None:intergenic 55.0%
GAAGGTGGCCATGGCATGAA+TGG + Chr8:68971446-68971465 None:intergenic 55.0%
TGGGGTCTCTTACTCTTCGG+TGG - Chr8:68971329-68971348 MsG0880046096.01.T01:intron 55.0%
! GGGCAAGGCTTGTTCCATCT+TGG - Chr8:68970839-68970858 MsG0880046096.01.T01:intron 55.0%
CACCAGACCTCTGCCTCACT+TGG + Chr8:68967880-68967899 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 68967842 68971688 68967842 ID=MsG0880046096.01;Name=MsG0880046096.01
Chr8 mRNA 68967842 68971688 68967842 ID=MsG0880046096.01.T01;Parent=MsG0880046096.01;Name=MsG0880046096.01.T01;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|5|0|554
Chr8 exon 68971391 68971688 68971391 ID=MsG0880046096.01.T01:exon:32668;Parent=MsG0880046096.01.T01
Chr8 exon 68970952 68971174 68970952 ID=MsG0880046096.01.T01:exon:32667;Parent=MsG0880046096.01.T01
Chr8 exon 68970155 68970485 68970155 ID=MsG0880046096.01.T01:exon:32666;Parent=MsG0880046096.01.T01
Chr8 exon 68968614 68968842 68968614 ID=MsG0880046096.01.T01:exon:32665;Parent=MsG0880046096.01.T01
Chr8 exon 68967842 68968425 68967842 ID=MsG0880046096.01.T01:exon:32664;Parent=MsG0880046096.01.T01
Chr8 CDS 68971391 68971688 68971391 ID=MsG0880046096.01.T01:cds;Parent=MsG0880046096.01.T01
Chr8 CDS 68970952 68971174 68970952 ID=MsG0880046096.01.T01:cds;Parent=MsG0880046096.01.T01
Chr8 CDS 68970155 68970485 68970155 ID=MsG0880046096.01.T01:cds;Parent=MsG0880046096.01.T01
Chr8 CDS 68968614 68968842 68968614 ID=MsG0880046096.01.T01:cds;Parent=MsG0880046096.01.T01
Chr8 CDS 68967842 68968425 68967842 ID=MsG0880046096.01.T01:cds;Parent=MsG0880046096.01.T01
Gene Sequence

>MsG0880046096.01.T01

ATGCTAGCAACATGGACACCAGACCAAGAATTCAACCAAGTGAGGCAGAGGTCTGGTGCAGACATGAAAAGGAAACTTAATTGGTATGATCTTGTAGCTCTTGGAGTTGGAGGAATGCTTGGTGTTGGTGTGTTTGTTACTACTGGTCCTGTTGCTCTTCATCAATCTGGTCCTTCAGTCTTTATTTCCTATATCATAGCTGGAATATCAGCACTTTTATCGTCTTTGTGTTACACTGAATTTGCAGTTCAAGTTCCAGTTGCTGGAGGAGCTTTCAGTTATTTAAGATTAACATTTGGAGAATTCTTGGGATATTTTGGTGGGGCAAATATACTAATGGAGTATGTTTTCTCAAATGCTGCTGTAGCTAGGAGTTTTACAGAATATTTGAGTTTTGCTTTTGGAGAAAATAATCCCAATGTATGGAGAGTGGAAGTTCATGGATTGCCAAAGGATTATAACATGTTGGATTTTCCAGCAGTAGCTCTCATTCTTCTCCTCACTCTTTGCTTGTGTCATAGTACAAAGGAAAGCTCCATATTGAACCTCATTATGACAGTGTTCCATGTGATTTTCTTTGGATTCATCGTTGTGGCTGGTTATTACAATGGAAGTACCAAAAACTTGGTTAATCCAAAAGGGATAGCTCCTTATGGTGTTAGAGGTGTTCTTGATGGAGCAGCAATAGTGTACTTTAGTTATATAGGCTATGATTCAGCTTCAACCATGGCTGAGGAGGTCAAGGATCCTTATAAGAGCCTACCTATTGGAATAGTGGGTTCAGTTCTTATAACAACTTTACTTTATTGCCTAATGGCTCTGTCTTTGTGCATGATGGTTCCTTACAATAAGATATCAGAGAAAGCATCATATTCAATGGCTTTCCTTAATATTGGTTGGAGTTGGGCAAGCAACATTGTTGGAGCAGGTGCAAGTTTAGGTATAGTGGCTTCTCTTCTAGTTGCAATGTTAGGACAAGCCAGATACCTTTGTGTCATGGGAAGGGCAAGGCTTGTTCCATCTTGGTTAGCCAAAGTACATCCTTCAACAGGCACTCCATTGAATGCCACTATCTTTTTGGGATTTTGCACTGCATCAATTGCGCTTTTCACAGAACTAGACATTATAATTGAGTTGATTAGCATTGGCACGCTAATGGTGTTCTACATGGTAGCAAATGCTCTAATATACCGTCGCTATGTAATCATCGGCCATACACCGCCTTTACACACACTTTTGTTCCTCTTTCTTCTCTCCCTCACTTCCTTATGCTTCTCCATAGTTTGGAAATTCAAACAGCAATGGTGGGGTCTCTTACTCTTCGGTGGCTCCATGATCACAATCACAGTTTTTTTCCAACACATGGTGCCTTGTAACAACAACCTTGTACAACAAGAATATGCTCAATGTTGGTATGTGCCATTCATGCCATGGCCACCTTCAATGTCCATCTTCCTCAATGTTTTTCTCATGACTACCCTCAAAACACTCTCTTTCCAACGCTTTGCTATATGGTCATGTTTTATTACCATGTTTTATGTGCTTTATGGTGTTCACTCTACGTATCAAGCCGAGGAGATTGAGAATTTGGGTGGTGTTAATCAAGTGGTCCCAAATTTGAGTGTAACCAACTTACAAACTAAGGTGGAAATCCAAATGCGTTAG
Protein sequence

>MsG0880046096.01.T01

MLATWTPDQEFNQVRQRSGADMKRKLNWYDLVALGVGGMLGVGVFVTTGPVALHQSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFLGYFGGANILMEYVFSNAAVARSFTEYLSFAFGENNPNVWRVEVHGLPKDYNMLDFPAVALILLLTLCLCHSTKESSILNLIMTVFHVIFFGFIVVAGYYNGSTKNLVNPKGIAPYGVRGVLDGAAIVYFSYIGYDSASTMAEEVKDPYKSLPIGIVGSVLITTLLYCLMALSLCMMVPYNKISEKASYSMAFLNIGWSWASNIVGAGASLGIVASLLVAMLGQARYLCVMGRARLVPSWLAKVHPSTGTPLNATIFLGFCTASIALFTELDIIIELISIGTLMVFYMVANALIYRRYVIIGHTPPLHTLLFLFLLSLTSLCFSIVWKFKQQWWGLLLFGGSMITITVFFQHMVPCNNNLVQQEYAQCWYVPFMPWPPSMSIFLNVFLMTTLKTLSFQRFAIWSCFITMFYVLYGVHSTYQAEEIENLGGVNQVVPNLSVTNLQTKVEIQMR*