Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046706.01.T01 | XP_039689624.1 | 99.107 | 448 | 4 | 0 | 40 | 487 | 1 | 448 | 0 | 918 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046706.01.T01 | O48780 | 84.855 | 449 | 68 | 0 | 39 | 487 | 9 | 457 | 0 | 809 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046706.01.T01 | A0A396IHT1 | 99.107 | 448 | 4 | 0 | 40 | 487 | 1 | 448 | 0.0 | 918 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880044782.01 | MsG0880046706.01 | 0.812161 | 4.871855e-51 | 3.074669e-48 |
| MsG0880045483.01 | MsG0880046706.01 | 0.803837 | 2.881466e-49 | 1.462960e-46 |
| MsG0780040472.01 | MsG0880046706.01 | 0.808063 | 3.723667e-50 | 2.108135e-47 |
| MsG0880041986.01 | MsG0880046706.01 | 0.801508 | 8.710659e-49 | 4.167306e-46 |
| MsG0880042544.01 | MsG0880046706.01 | 0.819516 | 1.114649e-52 | 8.596406e-50 |
| MsG0880043614.01 | MsG0880046706.01 | 0.807618 | 4.628143e-50 | 2.589869e-47 |
| MsG0380014668.01 | MsG0880046706.01 | 0.820913 | 5.334607e-53 | 4.277261e-50 |
| MsG0380016247.01 | MsG0880046706.01 | 0.800515 | 1.389746e-48 | 6.483780e-46 |
| MsG0580029127.01 | MsG0880046706.01 | 0.817279 | 3.581616e-52 | 2.596816e-49 |
| MsG0280009794.01 | MsG0880046706.01 | 0.840971 | 6.303053e-58 | 9.127737e-55 |
| MsG0780036752.01 | MsG0880046706.01 | 0.805389 | 1.367010e-49 | 7.222919e-47 |
| MsG0780036815.01 | MsG0880046706.01 | 0.813973 | 1.951165e-51 | 1.292801e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046706.01.T01 | MTR_4g113280 | 96.652 | 448 | 4 | 1 | 40 | 487 | 1 | 437 | 0.0 | 886 |
| MsG0880046706.01.T01 | MTR_2g054940 | 88.235 | 459 | 53 | 1 | 30 | 487 | 1 | 459 | 0.0 | 844 |
| MsG0880046706.01.T01 | MTR_7g081695 | 84.749 | 459 | 57 | 2 | 30 | 487 | 1 | 447 | 0.0 | 797 |
| MsG0880046706.01.T01 | MTR_1g076430 | 74.720 | 447 | 113 | 0 | 41 | 487 | 14 | 460 | 0.0 | 711 |
| MsG0880046706.01.T01 | MTR_1g041085 | 74.830 | 441 | 111 | 0 | 47 | 487 | 26 | 466 | 0.0 | 698 |
| MsG0880046706.01.T01 | MTR_4g070270 | 68.000 | 450 | 144 | 0 | 38 | 487 | 8 | 457 | 0.0 | 651 |
| MsG0880046706.01.T01 | MTR_7g118170 | 65.784 | 453 | 142 | 4 | 45 | 487 | 31 | 480 | 0.0 | 607 |
| MsG0880046706.01.T01 | MTR_1g110930 | 60.317 | 441 | 175 | 0 | 47 | 487 | 5 | 445 | 0.0 | 560 |
| MsG0880046706.01.T01 | MTR_3g105550 | 54.227 | 485 | 200 | 6 | 24 | 487 | 7 | 490 | 0.0 | 552 |
| MsG0880046706.01.T01 | MTR_5g056510 | 58.503 | 441 | 183 | 0 | 47 | 487 | 5 | 445 | 0.0 | 547 |
| MsG0880046706.01.T01 | MTR_6g074880 | 59.481 | 385 | 155 | 1 | 104 | 487 | 38 | 422 | 2.71e-163 | 471 |
| MsG0880046706.01.T01 | MTR_4g054630 | 55.714 | 420 | 183 | 3 | 71 | 487 | 1 | 420 | 6.75e-161 | 464 |
| MsG0880046706.01.T01 | MTR_4g054415 | 59.211 | 380 | 153 | 2 | 109 | 487 | 1 | 379 | 7.28e-160 | 460 |
| MsG0880046706.01.T01 | MTR_2g013740 | 52.489 | 442 | 201 | 3 | 47 | 487 | 33 | 466 | 6.44e-153 | 446 |
| MsG0880046706.01.T01 | MTR_6g032965 | 62.691 | 327 | 122 | 0 | 161 | 487 | 12 | 338 | 6.03e-150 | 434 |
| MsG0880046706.01.T01 | MTR_7g118160 | 55.866 | 358 | 116 | 2 | 130 | 487 | 56 | 371 | 3.56e-138 | 405 |
| MsG0880046706.01.T01 | MTR_2g007020 | 50.964 | 363 | 176 | 2 | 126 | 487 | 45 | 406 | 1.63e-130 | 386 |
| MsG0880046706.01.T01 | MTR_2g436480 | 48.158 | 380 | 193 | 3 | 110 | 486 | 27 | 405 | 8.06e-128 | 380 |
| MsG0880046706.01.T01 | MTR_1g102290 | 46.154 | 364 | 195 | 1 | 125 | 487 | 77 | 440 | 6.02e-116 | 350 |
| MsG0880046706.01.T01 | MTR_3g072980 | 45.504 | 367 | 198 | 2 | 122 | 487 | 74 | 439 | 3.74e-112 | 340 |
| MsG0880046706.01.T01 | MTR_3g072940 | 45.504 | 367 | 198 | 2 | 122 | 487 | 74 | 439 | 3.82e-112 | 340 |
| MsG0880046706.01.T01 | MTR_6g051440 | 45.833 | 360 | 193 | 2 | 129 | 487 | 80 | 438 | 1.53e-102 | 316 |
| MsG0880046706.01.T01 | MTR_4g062270 | 39.848 | 394 | 222 | 4 | 104 | 487 | 5 | 393 | 2.54e-92 | 289 |
| MsG0880046706.01.T01 | MTR_2g096210 | 38.596 | 399 | 218 | 6 | 109 | 487 | 9 | 400 | 1.04e-90 | 285 |
| MsG0880046706.01.T01 | MTR_1g115560 | 37.990 | 408 | 221 | 6 | 109 | 487 | 7 | 411 | 3.25e-90 | 284 |
| MsG0880046706.01.T01 | MTR_4g062190 | 36.881 | 404 | 231 | 4 | 101 | 487 | 6 | 402 | 2.89e-88 | 278 |
| MsG0880046706.01.T01 | MTR_4g062170 | 38.287 | 397 | 232 | 2 | 104 | 487 | 5 | 401 | 5.21e-87 | 275 |
| MsG0880046706.01.T01 | MTR_4g054260 | 58.491 | 212 | 87 | 1 | 279 | 489 | 87 | 298 | 9.40e-82 | 257 |
| MsG0880046706.01.T01 | MTR_4g053905 | 65.487 | 113 | 39 | 0 | 375 | 487 | 1 | 113 | 4.04e-45 | 155 |
| MsG0880046706.01.T01 | MTR_4g054265 | 48.305 | 118 | 60 | 1 | 109 | 226 | 1 | 117 | 2.44e-31 | 117 |
| MsG0880046706.01.T01 | MTR_7g086260 | 59.615 | 52 | 21 | 0 | 373 | 424 | 25 | 76 | 1.62e-13 | 66.2 |
| MsG0880046706.01.T01 | MTR_3g086260 | 26.667 | 225 | 129 | 7 | 256 | 476 | 154 | 346 | 1.49e-11 | 66.6 |
| MsG0880046706.01.T01 | MTR_4g075560 | 27.511 | 229 | 131 | 9 | 265 | 488 | 164 | 362 | 8.74e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046706.01.T01 | AT2G26640 | 84.855 | 449 | 68 | 0 | 39 | 487 | 9 | 457 | 0.0 | 809 |
| MsG0880046706.01.T01 | AT1G04220 | 71.047 | 449 | 125 | 4 | 43 | 487 | 18 | 465 | 0.0 | 661 |
| MsG0880046706.01.T01 | AT2G16280 | 66.594 | 458 | 153 | 0 | 30 | 487 | 8 | 465 | 0.0 | 654 |
| MsG0880046706.01.T01 | AT1G19440 | 68.243 | 444 | 141 | 0 | 44 | 487 | 26 | 469 | 0.0 | 647 |
| MsG0880046706.01.T01 | AT5G43760 | 72.273 | 440 | 117 | 2 | 53 | 487 | 34 | 473 | 0.0 | 631 |
| MsG0880046706.01.T01 | AT1G01120 | 63.087 | 447 | 160 | 2 | 45 | 486 | 32 | 478 | 0.0 | 606 |
| MsG0880046706.01.T01 | AT4G34510 | 63.048 | 433 | 150 | 3 | 58 | 487 | 15 | 440 | 0.0 | 576 |
| MsG0880046706.01.T01 | AT1G68530 | 58.929 | 448 | 182 | 1 | 40 | 487 | 1 | 446 | 0.0 | 571 |
| MsG0880046706.01.T01 | AT1G25450 | 59.410 | 441 | 179 | 0 | 47 | 487 | 1 | 441 | 0.0 | 560 |
| MsG0880046706.01.T01 | AT2G26250 | 53.814 | 472 | 185 | 5 | 45 | 487 | 37 | 504 | 0.0 | 526 |
| MsG0880046706.01.T01 | AT4G34520 | 57.955 | 440 | 174 | 2 | 59 | 487 | 6 | 445 | 1.16e-180 | 516 |
| MsG0880046706.01.T01 | AT4G34250 | 56.164 | 438 | 186 | 2 | 56 | 487 | 5 | 442 | 7.77e-176 | 503 |
| MsG0880046706.01.T01 | AT2G15090 | 58.962 | 424 | 164 | 3 | 73 | 487 | 12 | 434 | 1.05e-174 | 500 |
| MsG0880046706.01.T01 | AT2G46720 | 58.568 | 391 | 159 | 1 | 100 | 487 | 27 | 417 | 2.62e-170 | 488 |
| MsG0880046706.01.T01 | AT3G10280 | 57.289 | 391 | 157 | 2 | 100 | 487 | 27 | 410 | 1.30e-162 | 468 |
| MsG0880046706.01.T01 | AT1G68530 | 53.846 | 351 | 160 | 1 | 40 | 390 | 1 | 349 | 3.08e-141 | 411 |
| MsG0880046706.01.T01 | AT1G71160 | 47.493 | 379 | 198 | 1 | 108 | 486 | 25 | 402 | 3.56e-127 | 378 |
| MsG0880046706.01.T01 | AT5G49070 | 46.997 | 383 | 196 | 3 | 109 | 487 | 31 | 410 | 4.36e-119 | 357 |
| MsG0880046706.01.T01 | AT3G52160 | 42.702 | 459 | 212 | 8 | 29 | 487 | 7 | 414 | 1.32e-117 | 353 |
| MsG0880046706.01.T01 | AT3G52160 | 47.416 | 329 | 142 | 2 | 159 | 487 | 4 | 301 | 1.51e-104 | 316 |
| MsG0880046706.01.T01 | AT5G04530 | 42.033 | 364 | 204 | 3 | 131 | 487 | 34 | 397 | 1.64e-94 | 294 |
| MsG0880046706.01.T01 | AT2G28630 | 40.106 | 379 | 203 | 6 | 128 | 487 | 29 | 402 | 4.70e-91 | 286 |
| MsG0880046706.01.T01 | AT2G28630 | 40.106 | 379 | 203 | 6 | 128 | 487 | 29 | 402 | 4.70e-91 | 286 |
| MsG0880046706.01.T01 | AT1G07720 | 39.947 | 378 | 210 | 3 | 126 | 487 | 27 | 403 | 1.28e-87 | 277 |
| MsG0880046706.01.T01 | AT1G07720 | 39.947 | 378 | 210 | 3 | 126 | 487 | 70 | 446 | 1.93e-87 | 278 |
| MsG0880046706.01.T01 | AT5G49070 | 44.014 | 284 | 158 | 1 | 109 | 392 | 31 | 313 | 5.67e-81 | 254 |
| MsG0880046706.01.T01 | AT4G34850 | 27.982 | 218 | 125 | 7 | 264 | 478 | 91 | 279 | 2.08e-13 | 71.6 |
| MsG0880046706.01.T01 | AT4G34850 | 27.982 | 218 | 125 | 7 | 264 | 478 | 164 | 352 | 4.04e-13 | 71.2 |
Find 128 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACATTGAATTGGTATTT+TGG | 0.135605 | 8:+77060605 | MsG0880046706.01.T01:CDS |
| TGCCATTGGCATCTTCTTCT+TGG | 0.163447 | 8:-77060790 | None:intergenic |
| GTAGTAATTGTTACTGAAAA+TGG | 0.196813 | 8:+77059625 | None:intergenic |
| GTTACTGAAAATGGATCTTT+TGG | 0.253130 | 8:+77059634 | MsG0880046706.01.T01:CDS |
| GGCAAGTTCCTGGATGAATT+TGG | 0.256583 | 8:-77059840 | None:intergenic |
| GGAGCATCTACAATACAATT+TGG | 0.261765 | 8:+77060013 | MsG0880046706.01.T01:CDS |
| ATGACCAATGCATACGAATT+AGG | 0.278046 | 8:-77060569 | None:intergenic |
| TGCCGGAGGTAGAGCTGTTT+TGG | 0.290721 | 8:+77061018 | MsG0880046706.01.T01:CDS |
| AGGATGACACTTTATCGTTT+TGG | 0.293129 | 8:+77061091 | MsG0880046706.01.T01:CDS |
| ATCAGAATTCCTATATCTTT+AGG | 0.301992 | 8:-77060386 | None:intergenic |
| ACAAGTGGTGGGTCTAGTTT+AGG | 0.306892 | 8:+77061474 | MsG0880046706.01.T01:three_prime_UTR |
| TACCTTGTCAAAAGATCTTA+TGG | 0.307989 | 8:+77060823 | MsG0880046706.01.T01:CDS |
| AGCTTGAAATCAGGAATATA+AGG | 0.312020 | 8:-77060971 | None:intergenic |
| CTCCTTCTTAATTCTCCCTT+TGG | 0.313528 | 8:-77061161 | None:intergenic |
| TTAACAGATTTCTTGAAATC+AGG | 0.316167 | 8:-77059861 | None:intergenic |
| TTTCTAGCTTCTTTCATTGA+AGG | 0.316291 | 8:-77060302 | None:intergenic |
| CTTGAAATCAGGCAAGTTCC+TGG | 0.317830 | 8:-77059850 | None:intergenic |
| CCACAAGTGGGGAAAGAAAA+AGG | 0.317889 | 8:-77059935 | None:intergenic |
| GCTTCTTTCATTGAAGGATT+AGG | 0.319754 | 8:-77060296 | None:intergenic |
| GCCATTGGCATCTTCTTCTT+GGG | 0.324702 | 8:-77060789 | None:intergenic |
| CGATAAAGTGTCATCCTTGA+TGG | 0.332202 | 8:-77061085 | None:intergenic |
| GGTGGGATGGGTTGCAGTGC+GGG | 0.335773 | 8:+77060503 | MsG0880046706.01.T01:CDS |
| TGGCAAATAGCATTTGGTTC+TGG | 0.340846 | 8:+77061192 | MsG0880046706.01.T01:exon |
| TCAACAAGGTACACCGGTTT+CGG | 0.345198 | 8:-77060098 | None:intergenic |
| CAGTTCACTTTGGTATGAAT+TGG | 0.362955 | 8:+77061126 | MsG0880046706.01.T01:CDS |
| GTGCACTTACGCGATTCTTC+AGG | 0.371898 | 8:-77060137 | None:intergenic |
| CAGCATTAGGTGGTAGTTGT+TGG | 0.377971 | 8:+77061366 | MsG0880046706.01.T01:three_prime_UTR |
| GTTTAGATGGTAGATACCTT+TGG | 0.381422 | 8:-77061318 | None:intergenic |
| TTCTAATTGTTTGTTTCGAA+TGG | 0.382081 | 8:+77060649 | MsG0880046706.01.T01:CDS |
| TGGAGAATATTACATTGAAT+TGG | 0.382674 | 8:+77060597 | MsG0880046706.01.T01:CDS |
| TTACAATCTCGTCGTTTAGA+TGG | 0.389826 | 8:-77061331 | None:intergenic |
| AAAGATCTTATGGCAGTTGC+AGG | 0.390576 | 8:+77060833 | MsG0880046706.01.T01:CDS |
| GAATTTGCTATAATTCTAAC+AGG | 0.392256 | 8:+77059660 | MsG0880046706.01.T01:CDS |
| TCAGTAAAGCCTAAAGATAT+AGG | 0.395329 | 8:+77060377 | MsG0880046706.01.T01:CDS |
| CCCAAATATCATAAAAGTCT+TGG | 0.400754 | 8:-77059992 | None:intergenic |
| CAAGTGGTGGGTCTAGTTTA+GGG | 0.402066 | 8:+77061475 | MsG0880046706.01.T01:three_prime_UTR |
| AGAACATGGCAAATAGCATT+TGG | 0.419756 | 8:+77061186 | MsG0880046706.01.T01:exon |
| GAAGATGCCAATGGCAAGAT+TGG | 0.421328 | 8:+77060797 | MsG0880046706.01.T01:CDS |
| GATACCTTTGGAACATCAAC+AGG | 0.425393 | 8:-77061306 | None:intergenic |
| TTGGAACATCAACAGGAAAC+TGG | 0.427742 | 8:-77061299 | None:intergenic |
| AGTAGTTGTGTATCAGCATT+AGG | 0.430024 | 8:+77061353 | MsG0880046706.01.T01:three_prime_UTR |
| TCTAATTGTTTGTTTCGAAT+GGG | 0.432398 | 8:+77060650 | MsG0880046706.01.T01:CDS |
| GCAGCTATCTCCATGGCATA+TGG | 0.435506 | 8:+77061060 | MsG0880046706.01.T01:CDS |
| TGCGAACCGTGGTGATCAAT+TGG | 0.438062 | 8:-77060727 | None:intergenic |
| AAATTGAAGTATGTTAAACT+TGG | 0.445451 | 8:+77059882 | MsG0880046706.01.T01:CDS |
| TTGAAGATAGTGACGGAGTT+GGG | 0.450344 | 8:-77060430 | None:intergenic |
| GTGACGGAGTTGGGTTGAAC+AGG | 0.451449 | 8:-77060421 | None:intergenic |
| AATCGCGTAAGTGCACAAAA+AGG | 0.452825 | 8:+77060144 | MsG0880046706.01.T01:CDS |
| AATTCAACTTTGTCATGTGC+TGG | 0.454244 | 8:+77061511 | MsG0880046706.01.T01:three_prime_UTR |
| CGAAAGATTCTTGAGAGATC+GGG | 0.455522 | 8:+77060227 | MsG0880046706.01.T01:CDS |
| CTGTTCTTCACCACATTGGT+TGG | 0.466086 | 8:+77060920 | MsG0880046706.01.T01:CDS |
| TTCTTGAGAGATCGGGACTC+GGG | 0.466115 | 8:+77060234 | MsG0880046706.01.T01:CDS |
| ATTCTTGAGAGATCGGGACT+CGG | 0.466508 | 8:+77060233 | MsG0880046706.01.T01:CDS |
| GGAAAGTTAAGAACAGCCTC+TGG | 0.468115 | 8:-77060272 | None:intergenic |
| TCAAAAGCTAGCTTGAAATC+AGG | 0.468264 | 8:-77060980 | None:intergenic |
| GCGAAAGATTCTTGAGAGAT+CGG | 0.468284 | 8:+77060226 | MsG0880046706.01.T01:CDS |
| AACAGTAGTTGTTCTGATGT+TGG | 0.477505 | 8:-77060902 | None:intergenic |
| TGTTCTTCACCACATTGGTT+GGG | 0.482146 | 8:+77060921 | MsG0880046706.01.T01:CDS |
| GTGCAGTGTGGAAGGCTCTC+AGG | 0.489224 | 8:+77061229 | MsG0880046706.01.T01:three_prime_UTR |
| AGCTACAACCTAGGTGGGAT+GGG | 0.489907 | 8:+77060491 | MsG0880046706.01.T01:CDS |
| TATCACTATCTAATCACTCA+TGG | 0.499740 | 8:+77059906 | MsG0880046706.01.T01:CDS |
| CTTTCTGGTGTACAAGTGGT+GGG | 0.515133 | 8:+77061463 | MsG0880046706.01.T01:three_prime_UTR |
| GCTTTCTGGTGTACAAGTGG+TGG | 0.516598 | 8:+77061462 | MsG0880046706.01.T01:three_prime_UTR |
| GAAGCCGAGACTGTGATGTT+TGG | 0.518745 | 8:+77060326 | MsG0880046706.01.T01:CDS |
| GTCAATCATTACAAGCTTCG+AGG | 0.523795 | 8:+77060458 | MsG0880046706.01.T01:CDS |
| AGCCAAAGGGAGAATTAAGA+AGG | 0.524085 | 8:+77061159 | MsG0880046706.01.T01:CDS |
| AATATCATAAAAGTCTTGGA+TGG | 0.525987 | 8:-77059988 | None:intergenic |
| CTTACTAAATAGCTCATCAA+TGG | 0.529646 | 8:-77060351 | None:intergenic |
| ATTGAAGATAGTGACGGAGT+TGG | 0.531118 | 8:-77060431 | None:intergenic |
| GGAAATTTATGGATCAGTCT+AGG | 0.532242 | 8:+77060165 | MsG0880046706.01.T01:CDS |
| CAATCCTAATTCGTATGCAT+TGG | 0.534156 | 8:+77060565 | MsG0880046706.01.T01:CDS |
| ATCCAAAACAGCTCTACCTC+CGG | 0.535564 | 8:-77061020 | None:intergenic |
| CATGGCATATGGAGCCATCA+AGG | 0.538526 | 8:+77061071 | MsG0880046706.01.T01:CDS |
| GAGCTACAACCTAGGTGGGA+TGG | 0.541792 | 8:+77060490 | MsG0880046706.01.T01:CDS |
| AGGTGGGATGGGTTGCAGTG+CGG | 0.542640 | 8:+77060502 | MsG0880046706.01.T01:CDS |
| TCTTTCATTGAAGGATTAGG+AGG | 0.545431 | 8:-77060293 | None:intergenic |
| GTGTAACAGTGCAGTGTGGA+AGG | 0.546504 | 8:+77061221 | MsG0880046706.01.T01:three_prime_UTR |
| AAAACTAATATCACTACACT+AGG | 0.546944 | 8:+77060866 | MsG0880046706.01.T01:CDS |
| GTGGGATGGGTTGCAGTGCG+GGG | 0.548925 | 8:+77060504 | MsG0880046706.01.T01:CDS |
| CATACGAATTAGGATTGGCC+TGG | 0.552958 | 8:-77060559 | None:intergenic |
| GTTTCCTGTTGATGTTCCAA+AGG | 0.557767 | 8:+77061302 | MsG0880046706.01.T01:three_prime_UTR |
| ACACATCTAGCAGTTCACTT+TGG | 0.560068 | 8:+77061116 | MsG0880046706.01.T01:CDS |
| TCAACTTTGTCATGTGCTGG+TGG | 0.560593 | 8:+77061514 | MsG0880046706.01.T01:three_prime_UTR |
| CAATGCATACGAATTAGGAT+TGG | 0.561307 | 8:-77060564 | None:intergenic |
| TGGTCAATCTCATCTATCCA+AGG | 0.561417 | 8:-77061279 | None:intergenic |
| GTATGCATTGGTCATTAGCA+TGG | 0.562749 | 8:+77060577 | MsG0880046706.01.T01:CDS |
| GTTTCGAATGGGAGGAGCTG+TGG | 0.564123 | 8:+77060661 | MsG0880046706.01.T01:CDS |
| TCAATCATTACAAGCTTCGA+GGG | 0.569665 | 8:+77060459 | MsG0880046706.01.T01:CDS |
| ACTACTGTTCTTCACCACAT+TGG | 0.569759 | 8:+77060916 | MsG0880046706.01.T01:CDS |
| AATTGTTTGTTTCGAATGGG+AGG | 0.571309 | 8:+77060653 | MsG0880046706.01.T01:CDS |
| TCTGCTTTCTGGTGTACAAG+TGG | 0.574614 | 8:+77061459 | MsG0880046706.01.T01:three_prime_UTR |
| AATATAAAGAGCTACAACCT+AGG | 0.575611 | 8:+77060482 | MsG0880046706.01.T01:CDS |
| CAGGACAATCAACCCTGTGA+AGG | 0.575639 | 8:+77061248 | MsG0880046706.01.T01:three_prime_UTR |
| GGCACCAAACATCACAGTCT+CGG | 0.577209 | 8:-77060330 | None:intergenic |
| TCTTGCTAAAGATCTTCTCC+AGG | 0.579124 | 8:+77060541 | MsG0880046706.01.T01:CDS |
| CTTGATGGCTCCATATGCCA+TGG | 0.584004 | 8:-77061070 | None:intergenic |
| GCAGCAATCAACACCACAAG+TGG | 0.584783 | 8:-77059948 | None:intergenic |
| TAAAGAGCTACAACCTAGGT+GGG | 0.586492 | 8:+77060486 | MsG0880046706.01.T01:CDS |
| TGGCTTACACAGAAGCCAAA+GGG | 0.588822 | 8:+77061146 | MsG0880046706.01.T01:CDS |
| GGTAACACCAATCTTGCCAT+TGG | 0.592052 | 8:-77060804 | None:intergenic |
| AAACAGCTCTACCTCCGGCA+TGG | 0.599316 | 8:-77061015 | None:intergenic |
| CACCACGGTTCGCACTAACA+AGG | 0.615650 | 8:+77060736 | MsG0880046706.01.T01:CDS |
| TCTTGAGAGATCGGGACTCG+GGG | 0.615846 | 8:+77060235 | MsG0880046706.01.T01:CDS |
| AAAACTTGCAGCTATCTCCA+TGG | 0.616208 | 8:+77061053 | MsG0880046706.01.T01:CDS |
| ACTTGATGCCAAATTCATCC+AGG | 0.616809 | 8:+77059832 | MsG0880046706.01.T01:CDS |
| AAACTAATATCACTACACTA+GGG | 0.618694 | 8:+77060867 | MsG0880046706.01.T01:CDS |
| TATATCTTTAGGCTTTACTG+AGG | 0.624161 | 8:-77060375 | None:intergenic |
| TTGGCTTACACAGAAGCCAA+AGG | 0.624548 | 8:+77061145 | MsG0880046706.01.T01:CDS |
| CTGTGAAGGAGAAAAGCCCT+TGG | 0.625413 | 8:+77061262 | MsG0880046706.01.T01:three_prime_UTR |
| GGTCAATCTCATCTATCCAA+GGG | 0.627776 | 8:-77061278 | None:intergenic |
| CAGCAATCAACACCACAAGT+GGG | 0.638117 | 8:-77059947 | None:intergenic |
| CACTGCAACCCATCCCACCT+AGG | 0.640569 | 8:-77060499 | None:intergenic |
| ATAAAGAGCTACAACCTAGG+TGG | 0.642158 | 8:+77060485 | MsG0880046706.01.T01:CDS |
| TCTGATGTTGGAAGTACGAG+AGG | 0.642235 | 8:-77060890 | None:intergenic |
| GGAATCTACTTATCTTCCAG+AGG | 0.644232 | 8:+77060256 | MsG0880046706.01.T01:CDS |
| ATTAAGAAGGAGATAGAACA+TGG | 0.648037 | 8:+77061172 | MsG0880046706.01.T01:CDS |
| AAGTGGTGGGTCTAGTTTAG+GGG | 0.648800 | 8:+77061476 | MsG0880046706.01.T01:three_prime_UTR |
| ACAATCATTGAAGATAGTGA+CGG | 0.654673 | 8:-77060437 | None:intergenic |
| AAAGCGTGGACAGGAAAACA+AGG | 0.654849 | 8:-77060061 | None:intergenic |
| AGCAATCAACACCACAAGTG+GGG | 0.662251 | 8:-77059946 | None:intergenic |
| ACCCAAGAAGAAGATGCCAA+TGG | 0.668165 | 8:+77060788 | MsG0880046706.01.T01:CDS |
| AAGTTTCTTCCCAACCAATG+TGG | 0.668173 | 8:-77060930 | None:intergenic |
| GAGAAATCAACAAGGTACAC+CGG | 0.678354 | 8:-77060104 | None:intergenic |
| AGTTGTGTATCAGCATTAGG+TGG | 0.680421 | 8:+77061356 | MsG0880046706.01.T01:three_prime_UTR |
| TCAAGTGTAACAGTGCAGTG+TGG | 0.713371 | 8:+77061217 | MsG0880046706.01.T01:three_prime_UTR |
| AGCCTTGTTAGTGCGAACCG+TGG | 0.715624 | 8:-77060738 | None:intergenic |
| AAAATACCAATTGATCACCA+CGG | 0.722409 | 8:+77060721 | MsG0880046706.01.T01:CDS |
| TGTAACATGAGAAATCAACA+AGG | 0.794037 | 8:-77060112 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTAAATATTTTCCTTTAA+TGG | - | Chr8:77059752-77059771 | None:intergenic | 15.0% |
| !! | AAATTGAAGTATGTTAAACT+TGG | + | Chr8:77059882-77059901 | MsG0880046706.01.T01:CDS | 20.0% |
| !!! | ATTACATTGAATTGGTATTT+TGG | + | Chr8:77060605-77060624 | MsG0880046706.01.T01:CDS | 20.0% |
| !!! | ATTGATTTAACTTTTGAACA+GGG | + | Chr8:77059779-77059798 | MsG0880046706.01.T01:intron | 20.0% |
| ! | AAAACTAATATCACTACACT+AGG | + | Chr8:77060866-77060885 | MsG0880046706.01.T01:CDS | 25.0% |
| ! | AAACTAATATCACTACACTA+GGG | + | Chr8:77060867-77060886 | MsG0880046706.01.T01:CDS | 25.0% |
| ! | AATATCATAAAAGTCTTGGA+TGG | - | Chr8:77059991-77060010 | None:intergenic | 25.0% |
| ! | ATCAGAATTCCTATATCTTT+AGG | - | Chr8:77060389-77060408 | None:intergenic | 25.0% |
| ! | TCTAATTGTTTGTTTCGAAT+GGG | + | Chr8:77060650-77060669 | MsG0880046706.01.T01:CDS | 25.0% |
| ! | TGGAGAATATTACATTGAAT+TGG | + | Chr8:77060597-77060616 | MsG0880046706.01.T01:CDS | 25.0% |
| ! | TTAACAGATTTCTTGAAATC+AGG | - | Chr8:77059864-77059883 | None:intergenic | 25.0% |
| ! | TTCTAATTGTTTGTTTCGAA+TGG | + | Chr8:77060649-77060668 | MsG0880046706.01.T01:CDS | 25.0% |
| !! | ACTCATGATTTTTCCATTAA+AGG | + | Chr8:77059736-77059755 | MsG0880046706.01.T01:intron | 25.0% |
| !! | CCAAGACTTTTATGATATTT+GGG | + | Chr8:77059992-77060011 | MsG0880046706.01.T01:CDS | 25.0% |
| !! | TAGGATAATCAGTACTTTTA+CGG | + | Chr8:77060184-77060203 | MsG0880046706.01.T01:CDS | 25.0% |
| !! | TCCAAGACTTTTATGATATT+TGG | + | Chr8:77059991-77060010 | MsG0880046706.01.T01:CDS | 25.0% |
| !!! | GAATTTGCTATAATTCTAAC+AGG | + | Chr8:77059660-77059679 | MsG0880046706.01.T01:CDS | 25.0% |
| !!! | GATTGATTTAACTTTTGAAC+AGG | + | Chr8:77059778-77059797 | MsG0880046706.01.T01:intron | 25.0% |
| AAAATACCAATTGATCACCA+CGG | + | Chr8:77060721-77060740 | MsG0880046706.01.T01:CDS | 30.0% | |
| AAAATCATGAGTGACAACAA+AGG | - | Chr8:77059728-77059747 | None:intergenic | 30.0% | |
| AAATCATGAGTGACAACAAA+GGG | - | Chr8:77059727-77059746 | None:intergenic | 30.0% | |
| AATATAAAGAGCTACAACCT+AGG | + | Chr8:77060482-77060501 | MsG0880046706.01.T01:CDS | 30.0% | |
| ACAATCATTGAAGATAGTGA+CGG | - | Chr8:77060440-77060459 | None:intergenic | 30.0% | |
| AGCTTGAAATCAGGAATATA+AGG | - | Chr8:77060974-77060993 | None:intergenic | 30.0% | |
| ATTAAGAAGGAGATAGAACA+TGG | + | Chr8:77061172-77061191 | MsG0880046706.01.T01:CDS | 30.0% | |
| CCCAAATATCATAAAAGTCT+TGG | - | Chr8:77059995-77060014 | None:intergenic | 30.0% | |
| CTTACTAAATAGCTCATCAA+TGG | - | Chr8:77060354-77060373 | None:intergenic | 30.0% | |
| GTGCACAAAAAGGAAATTTA+TGG | + | Chr8:77060154-77060173 | MsG0880046706.01.T01:CDS | 30.0% | |
| TACCTTGTCAAAAGATCTTA+TGG | + | Chr8:77060823-77060842 | MsG0880046706.01.T01:CDS | 30.0% | |
| TATATCTTTAGGCTTTACTG+AGG | - | Chr8:77060378-77060397 | None:intergenic | 30.0% | |
| TATCACTATCTAATCACTCA+TGG | + | Chr8:77059906-77059925 | MsG0880046706.01.T01:CDS | 30.0% | |
| TCAGTAAAGCCTAAAGATAT+AGG | + | Chr8:77060377-77060396 | MsG0880046706.01.T01:CDS | 30.0% | |
| TGTAACATGAGAAATCAACA+AGG | - | Chr8:77060115-77060134 | None:intergenic | 30.0% | |
| ! | AGGAATTTTATTCTGCTTTC+TGG | + | Chr8:77061448-77061467 | MsG0880046706.01.T01:three_prime_UTR | 30.0% |
| ! | GGATTGATGAAATTTTCTCT+GGG | + | Chr8:77061387-77061406 | MsG0880046706.01.T01:three_prime_UTR | 30.0% |
| ! | GTTACTGAAAATGGATCTTT+TGG | + | Chr8:77059634-77059653 | MsG0880046706.01.T01:CDS | 30.0% |
| ! | TGGATTGATGAAATTTTCTC+TGG | + | Chr8:77061386-77061405 | MsG0880046706.01.T01:three_prime_UTR | 30.0% |
| !! | ATTGGTATTTTGGAAACGAT+CGG | + | Chr8:77060615-77060634 | MsG0880046706.01.T01:CDS | 30.0% |
| !! | TTTCTAGCTTCTTTCATTGA+AGG | - | Chr8:77060305-77060324 | None:intergenic | 30.0% |
| AAAGTCTTGGATGGAAAAAG+TGG | - | Chr8:77059982-77060001 | None:intergenic | 35.0% | |
| AACAGGGCAAAAATGACAAA+TGG | + | Chr8:77059795-77059814 | MsG0880046706.01.T01:intron | 35.0% | |
| AACAGTAGTTGTTCTGATGT+TGG | - | Chr8:77060905-77060924 | None:intergenic | 35.0% | |
| AATCATGAGTGACAACAAAG+GGG | - | Chr8:77059726-77059745 | None:intergenic | 35.0% | |
| AATTCAACTTTGTCATGTGC+TGG | + | Chr8:77061511-77061530 | MsG0880046706.01.T01:three_prime_UTR | 35.0% | |
| AATTGTTTGTTTCGAATGGG+AGG | + | Chr8:77060653-77060672 | MsG0880046706.01.T01:CDS | 35.0% | |
| AGAACATGGCAAATAGCATT+TGG | + | Chr8:77061186-77061205 | MsG0880046706.01.T01:exon | 35.0% | |
| AGTAGTTGTGTATCAGCATT+AGG | + | Chr8:77061353-77061372 | MsG0880046706.01.T01:three_prime_UTR | 35.0% | |
| ATGACCAATGCATACGAATT+AGG | - | Chr8:77060572-77060591 | None:intergenic | 35.0% | |
| CAATCCTAATTCGTATGCAT+TGG | + | Chr8:77060565-77060584 | MsG0880046706.01.T01:CDS | 35.0% | |
| CAATGCATACGAATTAGGAT+TGG | - | Chr8:77060567-77060586 | None:intergenic | 35.0% | |
| CAGTTCACTTTGGTATGAAT+TGG | + | Chr8:77061126-77061145 | MsG0880046706.01.T01:CDS | 35.0% | |
| GCTTCTTTCATTGAAGGATT+AGG | - | Chr8:77060299-77060318 | None:intergenic | 35.0% | |
| GGAAATTTATGGATCAGTCT+AGG | + | Chr8:77060165-77060184 | MsG0880046706.01.T01:CDS | 35.0% | |
| GTTTAGATGGTAGATACCTT+TGG | - | Chr8:77061321-77061340 | None:intergenic | 35.0% | |
| TCAATCATTACAAGCTTCGA+GGG | + | Chr8:77060459-77060478 | MsG0880046706.01.T01:CDS | 35.0% | |
| TCTTTCATTGAAGGATTAGG+AGG | - | Chr8:77060296-77060315 | None:intergenic | 35.0% | |
| TTACAATCTCGTCGTTTAGA+TGG | - | Chr8:77061334-77061353 | None:intergenic | 35.0% | |
| ! | ACTGAAAATGGATCTTTTGG+AGG | + | Chr8:77059637-77059656 | MsG0880046706.01.T01:CDS | 35.0% |
| ! | AGGATGACACTTTATCGTTT+TGG | + | Chr8:77061091-77061110 | MsG0880046706.01.T01:CDS | 35.0% |
| ! | CTGAAAATGGATCTTTTGGA+GGG | + | Chr8:77059638-77059657 | MsG0880046706.01.T01:CDS | 35.0% |
| ! | GATAATCAGTACTTTTACGG+AGG | + | Chr8:77060187-77060206 | MsG0880046706.01.T01:CDS | 35.0% |
| ! | GGAGCATCTACAATACAATT+TGG | + | Chr8:77060013-77060032 | MsG0880046706.01.T01:CDS | 35.0% |
| ! | TCAAAAGCTAGCTTGAAATC+AGG | - | Chr8:77060983-77061002 | None:intergenic | 35.0% |
| ! | TGCCATAAGATCTTTTGACA+AGG | - | Chr8:77060828-77060847 | None:intergenic | 35.0% |
| ! | TTTTGATCTTCTTCTGTCTG+AGG | - | Chr8:77060705-77060724 | None:intergenic | 35.0% |
| !! | TCTTCTGTCTGAGGTTTTAT+TGG | - | Chr8:77060696-77060715 | None:intergenic | 35.0% |
| !!! | GTTTTTCGAGTTCAGGTTTT+AGG | + | Chr8:77061428-77061447 | MsG0880046706.01.T01:three_prime_UTR | 35.0% |
| AAAACTTGCAGCTATCTCCA+TGG | + | Chr8:77061053-77061072 | MsG0880046706.01.T01:CDS | 40.0% | |
| AAAGATCTTATGGCAGTTGC+AGG | + | Chr8:77060833-77060852 | MsG0880046706.01.T01:CDS | 40.0% | |
| AAGTTTCTTCCCAACCAATG+TGG | - | Chr8:77060933-77060952 | None:intergenic | 40.0% | |
| AATCGCGTAAGTGCACAAAA+AGG | + | Chr8:77060144-77060163 | MsG0880046706.01.T01:CDS | 40.0% | |
| ACACATCTAGCAGTTCACTT+TGG | + | Chr8:77061116-77061135 | MsG0880046706.01.T01:CDS | 40.0% | |
| ACGAGTCAAAAAGTAAAGCG+TGG | - | Chr8:77060078-77060097 | None:intergenic | 40.0% | |
| ACTACTGTTCTTCACCACAT+TGG | + | Chr8:77060916-77060935 | MsG0880046706.01.T01:CDS | 40.0% | |
| ACTTGATGCCAAATTCATCC+AGG | + | Chr8:77059832-77059851 | MsG0880046706.01.T01:CDS | 40.0% | |
| AGCCAAAGGGAGAATTAAGA+AGG | + | Chr8:77061159-77061178 | MsG0880046706.01.T01:CDS | 40.0% | |
| AGTTGTGTATCAGCATTAGG+TGG | + | Chr8:77061356-77061375 | MsG0880046706.01.T01:three_prime_UTR | 40.0% | |
| ATAAAGAGCTACAACCTAGG+TGG | + | Chr8:77060485-77060504 | MsG0880046706.01.T01:CDS | 40.0% | |
| CGAAAGATTCTTGAGAGATC+GGG | + | Chr8:77060227-77060246 | MsG0880046706.01.T01:CDS | 40.0% | |
| CTCCTTCTTAATTCTCCCTT+TGG | - | Chr8:77061164-77061183 | None:intergenic | 40.0% | |
| GAGAAATCAACAAGGTACAC+CGG | - | Chr8:77060107-77060126 | None:intergenic | 40.0% | |
| GCGAAAGATTCTTGAGAGAT+CGG | + | Chr8:77060226-77060245 | MsG0880046706.01.T01:CDS | 40.0% | |
| GGAATCTACTTATCTTCCAG+AGG | + | Chr8:77060256-77060275 | MsG0880046706.01.T01:CDS | 40.0% | |
| GGTCAATCTCATCTATCCAA+GGG | - | Chr8:77061281-77061300 | None:intergenic | 40.0% | |
| GTCAATCATTACAAGCTTCG+AGG | + | Chr8:77060458-77060477 | MsG0880046706.01.T01:CDS | 40.0% | |
| GTTTCCTGTTGATGTTCCAA+AGG | + | Chr8:77061302-77061321 | MsG0880046706.01.T01:three_prime_UTR | 40.0% | |
| TAAAGAGCTACAACCTAGGT+GGG | + | Chr8:77060486-77060505 | MsG0880046706.01.T01:CDS | 40.0% | |
| TCAAAAAGTAAAGCGTGGAC+AGG | - | Chr8:77060073-77060092 | None:intergenic | 40.0% | |
| TCTTGCTAAAGATCTTCTCC+AGG | + | Chr8:77060541-77060560 | MsG0880046706.01.T01:CDS | 40.0% | |
| TGGTCAATCTCATCTATCCA+AGG | - | Chr8:77061282-77061301 | None:intergenic | 40.0% | |
| TTGGAACATCAACAGGAAAC+TGG | - | Chr8:77061302-77061321 | None:intergenic | 40.0% | |
| ! | ATTGAAGATAGTGACGGAGT+TGG | - | Chr8:77060434-77060453 | None:intergenic | 40.0% |
| ! | CGATAAAGTGTCATCCTTGA+TGG | - | Chr8:77061088-77061107 | None:intergenic | 40.0% |
| ! | GAACATTTTTGCATCCATGC+CGG | + | Chr8:77061001-77061020 | MsG0880046706.01.T01:CDS | 40.0% |
| ! | GTATGCATTGGTCATTAGCA+TGG | + | Chr8:77060577-77060596 | MsG0880046706.01.T01:CDS | 40.0% |
| ! | TGGCAAATAGCATTTGGTTC+TGG | + | Chr8:77061192-77061211 | MsG0880046706.01.T01:exon | 40.0% |
| ! | TGTTCTTCACCACATTGGTT+GGG | + | Chr8:77060921-77060940 | MsG0880046706.01.T01:CDS | 40.0% |
| ! | TTGAAGATAGTGACGGAGTT+GGG | - | Chr8:77060433-77060452 | None:intergenic | 40.0% |
| !! | GATACCTTTGGAACATCAAC+AGG | - | Chr8:77061309-77061328 | None:intergenic | 40.0% |
| AAAGCGTGGACAGGAAAACA+AGG | - | Chr8:77060064-77060083 | None:intergenic | 45.0% | |
| ACCCAAGAAGAAGATGCCAA+TGG | + | Chr8:77060788-77060807 | MsG0880046706.01.T01:CDS | 45.0% | |
| AGCAATCAACACCACAAGTG+GGG | - | Chr8:77059949-77059968 | None:intergenic | 45.0% | |
| ATCCAAAACAGCTCTACCTC+CGG | - | Chr8:77061023-77061042 | None:intergenic | 45.0% | |
| ATTCTTGAGAGATCGGGACT+CGG | + | Chr8:77060233-77060252 | MsG0880046706.01.T01:CDS | 45.0% | |
| CAGCAATCAACACCACAAGT+GGG | - | Chr8:77059950-77059969 | None:intergenic | 45.0% | |
| CAGCATTAGGTGGTAGTTGT+TGG | + | Chr8:77061366-77061385 | MsG0880046706.01.T01:three_prime_UTR | 45.0% | |
| CCACAAGTGGGGAAAGAAAA+AGG | - | Chr8:77059938-77059957 | None:intergenic | 45.0% | |
| CTGTTCTTCACCACATTGGT+TGG | + | Chr8:77060920-77060939 | MsG0880046706.01.T01:CDS | 45.0% | |
| CTTGAAATCAGGCAAGTTCC+TGG | - | Chr8:77059853-77059872 | None:intergenic | 45.0% | |
| GAAGATGCCAATGGCAAGAT+TGG | + | Chr8:77060797-77060816 | MsG0880046706.01.T01:CDS | 45.0% | |
| GCCATTGGCATCTTCTTCTT+GGG | - | Chr8:77060792-77060811 | None:intergenic | 45.0% | |
| GGAAAGTTAAGAACAGCCTC+TGG | - | Chr8:77060275-77060294 | None:intergenic | 45.0% | |
| GGCAAGTTCCTGGATGAATT+TGG | - | Chr8:77059843-77059862 | None:intergenic | 45.0% | |
| GGTAACACCAATCTTGCCAT+TGG | - | Chr8:77060807-77060826 | None:intergenic | 45.0% | |
| TCAACTTTGTCATGTGCTGG+TGG | + | Chr8:77061514-77061533 | MsG0880046706.01.T01:three_prime_UTR | 45.0% | |
| TCAAGTGTAACAGTGCAGTG+TGG | + | Chr8:77061217-77061236 | MsG0880046706.01.T01:three_prime_UTR | 45.0% | |
| TGCCATTGGCATCTTCTTCT+TGG | - | Chr8:77060793-77060812 | None:intergenic | 45.0% | |
| TGGCTTACACAGAAGCCAAA+GGG | + | Chr8:77061146-77061165 | MsG0880046706.01.T01:CDS | 45.0% | |
| TTGGCTTACACAGAAGCCAA+AGG | + | Chr8:77061145-77061164 | MsG0880046706.01.T01:CDS | 45.0% | |
| ! | AAGGGCTTTTCTCCTTCACA+GGG | - | Chr8:77061263-77061282 | None:intergenic | 45.0% |
| ! | CCTTTTTCTTTCCCCACTTG+TGG | + | Chr8:77059935-77059954 | MsG0880046706.01.T01:CDS | 45.0% |
| ! | CTTTCTGGTGTACAAGTGGT+GGG | + | Chr8:77061463-77061482 | MsG0880046706.01.T01:three_prime_UTR | 45.0% |
| ! | TCTGATGTTGGAAGTACGAG+AGG | - | Chr8:77060893-77060912 | None:intergenic | 45.0% |
| ! | TCTGCTTTCTGGTGTACAAG+TGG | + | Chr8:77061459-77061478 | MsG0880046706.01.T01:three_prime_UTR | 45.0% |
| !! | AAGTGGTGGGTCTAGTTTAG+GGG | + | Chr8:77061476-77061495 | MsG0880046706.01.T01:three_prime_UTR | 45.0% |
| !! | ACAAGTGGTGGGTCTAGTTT+AGG | + | Chr8:77061474-77061493 | MsG0880046706.01.T01:three_prime_UTR | 45.0% |
| !! | CAAGTGGTGGGTCTAGTTTA+GGG | + | Chr8:77061475-77061494 | MsG0880046706.01.T01:three_prime_UTR | 45.0% |
| !! | CATACGAATTAGGATTGGCC+TGG | - | Chr8:77060562-77060581 | None:intergenic | 45.0% |
| !! | CTTTTTGACTCGTCCGAAAC+CGG | + | Chr8:77060085-77060104 | MsG0880046706.01.T01:CDS | 45.0% |
| !! | TCAACAAGGTACACCGGTTT+CGG | - | Chr8:77060101-77060120 | None:intergenic | 45.0% |
| !!! | CGTGACTGTTTTTCGAGTTC+AGG | + | Chr8:77061421-77061440 | MsG0880046706.01.T01:three_prime_UTR | 45.0% |
| AGCTACAACCTAGGTGGGAT+GGG | + | Chr8:77060491-77060510 | MsG0880046706.01.T01:CDS | 50.0% | |
| CAGGACAATCAACCCTGTGA+AGG | + | Chr8:77061248-77061267 | MsG0880046706.01.T01:three_prime_UTR | 50.0% | |
| CATGGCATATGGAGCCATCA+AGG | + | Chr8:77061071-77061090 | MsG0880046706.01.T01:CDS | 50.0% | |
| CTGTGAAGGAGAAAAGCCCT+TGG | + | Chr8:77061262-77061281 | MsG0880046706.01.T01:three_prime_UTR | 50.0% | |
| GAAGCCGAGACTGTGATGTT+TGG | + | Chr8:77060326-77060345 | MsG0880046706.01.T01:CDS | 50.0% | |
| GCAGCAATCAACACCACAAG+TGG | - | Chr8:77059951-77059970 | None:intergenic | 50.0% | |
| GCAGCTATCTCCATGGCATA+TGG | + | Chr8:77061060-77061079 | MsG0880046706.01.T01:CDS | 50.0% | |
| GGCACCAAACATCACAGTCT+CGG | - | Chr8:77060333-77060352 | None:intergenic | 50.0% | |
| GTGCACTTACGCGATTCTTC+AGG | - | Chr8:77060140-77060159 | None:intergenic | 50.0% | |
| GTGTAACAGTGCAGTGTGGA+AGG | + | Chr8:77061221-77061240 | MsG0880046706.01.T01:three_prime_UTR | 50.0% | |
| TGCGAACCGTGGTGATCAAT+TGG | - | Chr8:77060730-77060749 | None:intergenic | 50.0% | |
| TTCTTGAGAGATCGGGACTC+GGG | + | Chr8:77060234-77060253 | MsG0880046706.01.T01:CDS | 50.0% | |
| ! | CAAGGGCTTTTCTCCTTCAC+AGG | - | Chr8:77061264-77061283 | None:intergenic | 50.0% |
| ! | CATTTTTGCATCCATGCCGG+AGG | + | Chr8:77061004-77061023 | MsG0880046706.01.T01:CDS | 50.0% |
| ! | CTTGATGGCTCCATATGCCA+TGG | - | Chr8:77061073-77061092 | None:intergenic | 50.0% |
| ! | GCTTTCTGGTGTACAAGTGG+TGG | + | Chr8:77061462-77061481 | MsG0880046706.01.T01:three_prime_UTR | 50.0% |
| AAACAGCTCTACCTCCGGCA+TGG | - | Chr8:77061018-77061037 | None:intergenic | 55.0% | |
| CACCACGGTTCGCACTAACA+AGG | + | Chr8:77060736-77060755 | MsG0880046706.01.T01:CDS | 55.0% | |
| GAGCTACAACCTAGGTGGGA+TGG | + | Chr8:77060490-77060509 | MsG0880046706.01.T01:CDS | 55.0% | |
| GTTTCGAATGGGAGGAGCTG+TGG | + | Chr8:77060661-77060680 | MsG0880046706.01.T01:CDS | 55.0% | |
| TCTTGAGAGATCGGGACTCG+GGG | + | Chr8:77060235-77060254 | MsG0880046706.01.T01:CDS | 55.0% | |
| ! | TGCCGGAGGTAGAGCTGTTT+TGG | + | Chr8:77061018-77061037 | MsG0880046706.01.T01:CDS | 55.0% |
| !! | AGCCTTGTTAGTGCGAACCG+TGG | - | Chr8:77060741-77060760 | None:intergenic | 55.0% |
| !! | GTGACGGAGTTGGGTTGAAC+AGG | - | Chr8:77060424-77060443 | None:intergenic | 55.0% |
| CACTGCAACCCATCCCACCT+AGG | - | Chr8:77060502-77060521 | None:intergenic | 60.0% | |
| GTGCAGTGTGGAAGGCTCTC+AGG | + | Chr8:77061229-77061248 | MsG0880046706.01.T01:three_prime_UTR | 60.0% | |
| !! | AGGTGGGATGGGTTGCAGTG+CGG | + | Chr8:77060502-77060521 | MsG0880046706.01.T01:CDS | 60.0% |
| !! | GGTGGGATGGGTTGCAGTGC+GGG | + | Chr8:77060503-77060522 | MsG0880046706.01.T01:CDS | 65.0% |
| !! | GTGGGATGGGTTGCAGTGCG+GGG | + | Chr8:77060504-77060523 | MsG0880046706.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 77059632 | 77061548 | 77059632 | ID=MsG0880046706.01;Name=MsG0880046706.01 |
| Chr8 | mRNA | 77059632 | 77061548 | 77059632 | ID=MsG0880046706.01.T01;Parent=MsG0880046706.01;Name=MsG0880046706.01.T01;_AED=0.15;_eAED=0.16;_QI=0|0|0.5|1|0|0|2|347|493 |
| Chr8 | exon | 77059632 | 77059711 | 77059632 | ID=MsG0880046706.01.T01:exon:8742;Parent=MsG0880046706.01.T01 |
| Chr8 | exon | 77059800 | 77061548 | 77059800 | ID=MsG0880046706.01.T01:exon:8743;Parent=MsG0880046706.01.T01 |
| Chr8 | CDS | 77059632 | 77059711 | 77059632 | ID=MsG0880046706.01.T01:cds;Parent=MsG0880046706.01.T01 |
| Chr8 | CDS | 77059800 | 77061201 | 77059800 | ID=MsG0880046706.01.T01:cds;Parent=MsG0880046706.01.T01 |
| Chr8 | three_prime_UTR | 77061202 | 77061548 | 77061202 | ID=MsG0880046706.01.T01:three_prime_utr;Parent=MsG0880046706.01.T01 |
| Gene Sequence |
| Protein sequence |
