Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029127.01.T01 | XP_003616539.1 | 74.779 | 226 | 37 | 5 | 20 | 242 | 3 | 211 | 9.18E-105 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0580029127.01 | 0.802859 | 4.593057e-49 | 2.274174e-46 |
| MsG0080048687.01 | MsG0580029127.01 | 0.806827 | 6.809099e-50 | 3.732834e-47 |
| MsG0080048856.01 | MsG0580029127.01 | 0.804232 | 2.384305e-49 | 1.222798e-46 |
| MsG0080048971.01 | MsG0580029127.01 | 0.830690 | 2.547547e-55 | 2.704151e-52 |
| MsG0180000139.01 | MsG0580029127.01 | 0.839529 | 1.500837e-57 | 2.078266e-54 |
| MsG0180000155.01 | MsG0580029127.01 | 0.803014 | 4.266352e-49 | 2.120621e-46 |
| MsG0180000331.01 | MsG0580029127.01 | 0.817712 | 2.859990e-52 | 2.098513e-49 |
| MsG0180000334.01 | MsG0580029127.01 | 0.801033 | 1.089693e-48 | 5.151418e-46 |
| MsG0180000824.01 | MsG0580029127.01 | 0.830636 | 2.626760e-55 | 2.783639e-52 |
| MsG0180001828.01 | MsG0580029127.01 | 0.817828 | 2.693464e-52 | 1.982619e-49 |
| MsG0180001892.01 | MsG0580029127.01 | 0.803617 | 3.200728e-49 | 1.615850e-46 |
| MsG0180003094.01 | MsG0580029127.01 | 0.864710 | 9.994465e-65 | 3.168491e-61 |
| MsG0180003371.01 | MsG0580029127.01 | 0.823650 | 1.235745e-53 | 1.070517e-50 |
| MsG0180003493.01 | MsG0580029127.01 | 0.832860 | 7.428824e-56 | 8.408510e-53 |
| MsG0180003548.01 | MsG0580029127.01 | 0.828213 | 1.018870e-54 | 1.006122e-51 |
| MsG0180003651.01 | MsG0580029127.01 | 0.859328 | 4.461676e-63 | 1.173950e-59 |
| MsG0180003786.01 | MsG0580029127.01 | 0.845909 | 3.025350e-59 | 5.119571e-56 |
| MsG0180003793.01 | MsG0580029127.01 | 0.832106 | 1.142257e-55 | 1.264143e-52 |
| MsG0180003920.01 | MsG0580029127.01 | 0.846415 | 2.203771e-59 | 3.790540e-56 |
| MsG0180004099.01 | MsG0580029127.01 | 0.811294 | 7.525089e-51 | 4.640093e-48 |
| MsG0180004481.01 | MsG0580029127.01 | 0.801379 | 9.257798e-49 | 4.414637e-46 |
| MsG0180004482.01 | MsG0580029127.01 | 0.810910 | 9.114933e-51 | 5.564260e-48 |
| MsG0180004743.01 | MsG0580029127.01 | 0.818546 | 1.852299e-52 | 1.390715e-49 |
| MsG0180004754.01 | MsG0580029127.01 | 0.860139 | 2.543652e-63 | 6.882539e-60 |
| MsG0180004854.01 | MsG0580029127.01 | 0.854939 | 8.812529e-62 | 2.000955e-58 |
| MsG0180004975.01 | MsG0580029127.01 | 0.805939 | 1.047825e-49 | 5.615473e-47 |
| MsG0180005530.01 | MsG0580029127.01 | 0.839100 | 1.939606e-57 | 2.650831e-54 |
| MsG0180005575.01 | MsG0580029127.01 | 0.854915 | 8.953678e-62 | 2.031416e-58 |
| MsG0180005746.01 | MsG0580029127.01 | 0.828694 | 7.797903e-55 | 7.808591e-52 |
| MsG0180005962.01 | MsG0580029127.01 | -0.834797 | 2.434919e-56 | 2.920470e-53 |
| MsG0180006000.01 | MsG0580029127.01 | 0.802022 | 6.833151e-49 | 3.311869e-46 |
| MsG0180006024.01 | MsG0580029127.01 | 0.803067 | 4.160759e-49 | 2.070924e-46 |
| MsG0180006224.01 | MsG0580029127.01 | 0.803900 | 2.795945e-49 | 1.421861e-46 |
| MsG0280010778.01 | MsG0580029127.01 | 0.805462 | 1.319670e-49 | 6.986202e-47 |
| MsG0280010907.01 | MsG0580029127.01 | 0.822796 | 1.955128e-53 | 1.653181e-50 |
| MsG0280011014.01 | MsG0580029127.01 | 0.859212 | 4.834489e-63 | 1.266959e-59 |
| MsG0280011339.01 | MsG0580029127.01 | 0.816178 | 6.323908e-52 | 4.449304e-49 |
| MsG0280011388.01 | MsG0580029127.01 | 0.871023 | 9.367406e-67 | 3.721646e-63 |
| MsG0280011416.01 | MsG0580029127.01 | 0.820492 | 6.666906e-53 | 5.283015e-50 |
| MsG0380012073.01 | MsG0580029127.01 | 0.812237 | 4.690966e-51 | 2.966600e-48 |
| MsG0380012471.01 | MsG0580029127.01 | 0.819774 | 9.733992e-53 | 7.561625e-50 |
| MsG0380013475.01 | MsG0580029127.01 | 0.800774 | 1.230917e-48 | 5.780315e-46 |
| MsG0380013549.01 | MsG0580029127.01 | 0.802688 | 4.982421e-49 | 2.456224e-46 |
| MsG0380013641.01 | MsG0580029127.01 | 0.836951 | 6.923290e-57 | 8.861014e-54 |
| MsG0380014668.01 | MsG0580029127.01 | 0.822005 | 2.985879e-53 | 2.468398e-50 |
| MsG0380014778.01 | MsG0580029127.01 | 0.822357 | 2.474229e-53 | 2.066229e-50 |
| MsG0480018477.01 | MsG0580029127.01 | 0.819988 | 8.697270e-53 | 6.796493e-50 |
| MsG0480018894.01 | MsG0580029127.01 | 0.858587 | 7.436130e-63 | 1.907245e-59 |
| MsG0480019922.01 | MsG0580029127.01 | 0.823678 | 1.217222e-53 | 1.055322e-50 |
| MsG0480020597.01 | MsG0580029127.01 | 0.816116 | 6.526876e-52 | 4.584387e-49 |
| MsG0480020780.01 | MsG0580029127.01 | 0.849438 | 3.234286e-60 | 6.131195e-57 |
| MsG0480020847.01 | MsG0580029127.01 | 0.802322 | 5.928105e-49 | 2.895462e-46 |
| MsG0480020879.01 | MsG0580029127.01 | 0.817637 | 2.974039e-52 | 2.177665e-49 |
| MsG0480021037.01 | MsG0580029127.01 | 0.824812 | 6.590135e-54 | 5.900857e-51 |
| MsG0480021448.01 | MsG0580029127.01 | 0.802225 | 6.205879e-49 | 3.023464e-46 |
| MsG0480022164.01 | MsG0580029127.01 | 0.800856 | 1.184193e-48 | 5.572962e-46 |
| MsG0480022620.01 | MsG0580029127.01 | 0.840464 | 8.558175e-58 | 1.220074e-54 |
| MsG0480022877.01 | MsG0580029127.01 | 0.819956 | 8.843113e-53 | 6.904399e-50 |
| MsG0480023221.01 | MsG0580029127.01 | 0.835873 | 1.302092e-56 | 1.613181e-53 |
| MsG0480023272.01 | MsG0580029127.01 | 0.802286 | 6.030126e-49 | 2.942552e-46 |
| MsG0480023307.01 | MsG0580029127.01 | 0.807690 | 4.469723e-50 | 2.505851e-47 |
| MsG0480023463.01 | MsG0580029127.01 | 0.835777 | 1.377308e-56 | 1.701411e-53 |
| MsG0480024001.01 | MsG0580029127.01 | 0.810939 | 8.983893e-51 | 5.488702e-48 |
| MsG0580024358.01 | MsG0580029127.01 | 0.810494 | 1.120977e-50 | 6.767080e-48 |
| MsG0580025131.01 | MsG0580029127.01 | 0.800552 | 1.366037e-48 | 6.379053e-46 |
| MsG0580025409.01 | MsG0580029127.01 | 0.814161 | 1.773531e-51 | 1.181110e-48 |
| MsG0580025814.01 | MsG0580029127.01 | 0.807148 | 5.824153e-50 | 3.219493e-47 |
| MsG0580026059.01 | MsG0580029127.01 | 0.850605 | 1.524300e-60 | 3.002088e-57 |
| MsG0380015435.01 | MsG0580029127.01 | 0.819825 | 9.476205e-53 | 7.371637e-50 |
| MsG0380015549.01 | MsG0580029127.01 | 0.800609 | 1.330238e-48 | 6.220815e-46 |
| MsG0380015677.01 | MsG0580029127.01 | 0.803424 | 3.510096e-49 | 1.763257e-46 |
| MsG0380015831.01 | MsG0580029127.01 | 0.803588 | 3.245517e-49 | 1.637315e-46 |
| MsG0380015944.01 | MsG0580029127.01 | 0.824306 | 8.667727e-54 | 7.647986e-51 |
| MsG0380016126.01 | MsG0580029127.01 | 0.815679 | 8.171116e-52 | 5.671117e-49 |
| MsG0380016247.01 | MsG0580029127.01 | 0.860289 | 2.290798e-63 | 6.229439e-60 |
| MsG0380016290.01 | MsG0580029127.01 | 0.811916 | 5.510525e-51 | 3.454314e-48 |
| MsG0380016505.01 | MsG0580029127.01 | 0.805683 | 1.186035e-49 | 6.314632e-47 |
| MsG0380016778.01 | MsG0580029127.01 | 0.821427 | 4.060355e-53 | 3.302452e-50 |
| MsG0380016920.01 | MsG0580029127.01 | 0.800083 | 1.701723e-48 | 7.852754e-46 |
| MsG0380016970.01 | MsG0580029127.01 | 0.807453 | 5.017222e-50 | 2.795708e-47 |
| MsG0380016994.01 | MsG0580029127.01 | 0.828624 | 8.106151e-55 | 8.100878e-52 |
| MsG0380017159.01 | MsG0580029127.01 | 0.817034 | 4.064718e-52 | 2.927660e-49 |
| MsG0380017996.01 | MsG0580029127.01 | 0.845769 | 3.303613e-59 | 5.565325e-56 |
| MsG0480018278.01 | MsG0580029127.01 | 0.836510 | 8.969142e-57 | 1.132708e-53 |
| MsG0480018313.01 | MsG0580029127.01 | 0.811960 | 5.390309e-51 | 3.383126e-48 |
| MsG0580026226.01 | MsG0580029127.01 | 0.811950 | 5.417733e-51 | 3.399478e-48 |
| MsG0580026593.01 | MsG0580029127.01 | 0.813985 | 1.940187e-51 | 1.285862e-48 |
| MsG0580027091.01 | MsG0580029127.01 | 0.816716 | 4.791196e-52 | 3.420872e-49 |
| MsG0580027431.01 | MsG0580029127.01 | 0.850474 | 1.658588e-60 | 3.252650e-57 |
| MsG0580027798.01 | MsG0580029127.01 | 0.806843 | 6.754482e-50 | 3.704592e-47 |
| MsG0580027925.01 | MsG0580029127.01 | 0.800828 | 1.200046e-48 | 5.643217e-46 |
| MsG0580028060.01 | MsG0580029127.01 | 0.842962 | 1.876339e-58 | 2.891707e-55 |
| MsG0580028897.01 | MsG0580029127.01 | 0.844460 | 7.456080e-59 | 1.204534e-55 |
| MsG0580029127.01 | MsG0580029729.01 | 0.819489 | 1.130634e-52 | 8.713135e-50 |
| MsG0580029127.01 | MsG0680030865.01 | 0.843210 | 1.611798e-58 | 2.503540e-55 |
| MsG0580029127.01 | MsG0680031488.01 | 0.815542 | 8.766866e-52 | 6.061628e-49 |
| MsG0580029127.01 | MsG0680031549.01 | 0.855940 | 4.501093e-62 | 1.056753e-58 |
| MsG0580029127.01 | MsG0680031622.01 | 0.810028 | 1.412743e-50 | 8.425265e-48 |
| MsG0580029127.01 | MsG0680031628.01 | 0.854905 | 9.012554e-62 | 2.044085e-58 |
| MsG0580029127.01 | MsG0680032935.01 | 0.821803 | 3.324163e-53 | 2.732468e-50 |
| MsG0580029127.01 | MsG0680034853.01 | 0.808620 | 2.832314e-50 | 1.627037e-47 |
| MsG0580029127.01 | MsG0680035475.01 | 0.814895 | 1.220399e-51 | 8.289916e-49 |
| MsG0580029127.01 | MsG0680035498.01 | 0.802096 | 6.598338e-49 | 3.204135e-46 |
| MsG0580029127.01 | MsG0680035526.01 | 0.812519 | 4.069399e-51 | 2.593009e-48 |
| MsG0580029127.01 | MsG0680035876.01 | 0.800232 | 1.587017e-48 | 7.351044e-46 |
| MsG0580029127.01 | MsG0680035888.01 | 0.835245 | 1.877080e-56 | 2.282360e-53 |
| MsG0580029127.01 | MsG0780035979.01 | 0.830183 | 3.389977e-55 | 3.545565e-52 |
| MsG0580029127.01 | MsG0780036136.01 | 0.805032 | 1.623710e-49 | 8.500931e-47 |
| MsG0580029127.01 | MsG0780036147.01 | 0.804551 | 2.046241e-49 | 1.058088e-46 |
| MsG0580029127.01 | MsG0780036477.01 | 0.823371 | 1.436276e-53 | 1.234203e-50 |
| MsG0580029127.01 | MsG0780036752.01 | 0.831658 | 1.473177e-55 | 1.609171e-52 |
| MsG0580029127.01 | MsG0780036815.01 | 0.867278 | 1.539825e-65 | 5.345094e-62 |
| MsG0580029127.01 | MsG0780037093.01 | 0.857635 | 1.427151e-62 | 3.545840e-59 |
| MsG0580029127.01 | MsG0780037240.01 | 0.840629 | 7.749880e-58 | 1.110435e-54 |
| MsG0580029127.01 | MsG0780038400.01 | 0.840672 | 7.553506e-58 | 1.083751e-54 |
| MsG0580029127.01 | MsG0780038603.01 | 0.819435 | 1.163354e-52 | 8.951598e-50 |
| MsG0580029127.01 | MsG0780039137.01 | 0.806644 | 7.441735e-50 | 4.060243e-47 |
| MsG0580029127.01 | MsG0780039307.01 | 0.813069 | 3.084209e-51 | 1.993934e-48 |
| MsG0580029127.01 | MsG0780039643.01 | 0.800211 | 1.603058e-48 | 7.421311e-46 |
| MsG0580029127.01 | MsG0780040057.01 | 0.800695 | 1.277656e-48 | 5.987831e-46 |
| MsG0580029127.01 | MsG0780040472.01 | 0.849246 | 3.657122e-60 | 6.891423e-57 |
| MsG0580029127.01 | MsG0780040529.01 | 0.824077 | 9.813265e-54 | 8.603225e-51 |
| MsG0580029127.01 | MsG0780040544.01 | 0.837837 | 4.107025e-57 | 5.401303e-54 |
| MsG0580029127.01 | MsG0780040926.01 | 0.869232 | 3.613729e-66 | 1.346070e-62 |
| MsG0580029127.01 | MsG0780041016.01 | 0.821115 | 4.792590e-53 | 3.864286e-50 |
| MsG0580029127.01 | MsG0780041223.01 | 0.819483 | 1.134407e-52 | 8.740854e-50 |
| MsG0580029127.01 | MsG0880041986.01 | 0.821276 | 4.401386e-53 | 3.564465e-50 |
| MsG0580029127.01 | MsG0880042091.01 | 0.819629 | 1.050502e-52 | 8.126805e-50 |
| MsG0580029127.01 | MsG0880042128.01 | 0.813467 | 2.522624e-51 | 1.648752e-48 |
| MsG0580029127.01 | MsG0880042129.01 | 0.824796 | 6.648204e-54 | 5.950297e-51 |
| MsG0580029127.01 | MsG0880042544.01 | 0.860047 | 2.711648e-63 | 7.314477e-60 |
| MsG0580029127.01 | MsG0880042760.01 | 0.807194 | 5.692953e-50 | 3.150865e-47 |
| MsG0580029127.01 | MsG0880042779.01 | 0.835676 | 1.460888e-56 | 1.799244e-53 |
| MsG0580029127.01 | MsG0880042795.01 | 0.800709 | 1.268774e-48 | 5.948288e-46 |
| MsG0580029127.01 | MsG0880042991.01 | 0.826487 | 2.641357e-54 | 2.480439e-51 |
| MsG0580029127.01 | MsG0880043614.01 | 0.810315 | 1.225465e-50 | 7.362847e-48 |
| MsG0580029127.01 | MsG0880043944.01 | 0.809955 | 1.465053e-50 | 8.720404e-48 |
| MsG0580029127.01 | MsG0880044008.01 | 0.850882 | 1.274127e-60 | 2.532304e-57 |
| MsG0580029127.01 | MsG0880044555.01 | 0.825181 | 5.391097e-54 | 4.878538e-51 |
| MsG0580029127.01 | MsG0880044782.01 | 0.875807 | 2.302388e-68 | 1.090150e-64 |
| MsG0580029127.01 | MsG0880045145.01 | 0.824014 | 1.015271e-53 | 8.884684e-51 |
| MsG0580029127.01 | MsG0880045294.01 | 0.825741 | 3.972138e-54 | 3.652103e-51 |
| MsG0580029127.01 | MsG0880045453.01 | 0.825137 | 5.521665e-54 | 4.990388e-51 |
| MsG0580029127.01 | MsG0880045483.01 | 0.837902 | 3.950955e-57 | 5.205939e-54 |
| MsG0580029127.01 | MsG0880045506.01 | 0.808788 | 2.606872e-50 | 1.504190e-47 |
| MsG0580029127.01 | MsG0880045838.01 | 0.809489 | 1.845196e-50 | 1.084818e-47 |
| MsG0580029127.01 | MsG0880046059.01 | 0.803887 | 2.812332e-49 | 1.429762e-46 |
| MsG0580029127.01 | MsG0880046284.01 | 0.818724 | 1.688177e-52 | 1.273665e-49 |
| MsG0580029127.01 | MsG0880046706.01 | 0.817279 | 3.581616e-52 | 2.596816e-49 |
| MsG0580029127.01 | MsG0880047506.01 | 0.803452 | 3.462243e-49 | 1.740500e-46 |
| MsG0280006712.01 | MsG0580029127.01 | 0.821051 | 4.959181e-53 | 3.991754e-50 |
| MsG0280006993.01 | MsG0580029127.01 | 0.850575 | 1.553657e-60 | 3.056903e-57 |
| MsG0280007196.01 | MsG0580029127.01 | 0.832755 | 7.887611e-56 | 8.899838e-53 |
| MsG0280007226.01 | MsG0580029127.01 | 0.842857 | 2.000769e-58 | 3.073466e-55 |
| MsG0280007452.01 | MsG0580029127.01 | 0.835100 | 2.042437e-56 | 2.472119e-53 |
| MsG0280007501.01 | MsG0580029127.01 | 0.800748 | 1.246257e-48 | 5.848543e-46 |
| MsG0280007506.01 | MsG0580029127.01 | 0.813854 | 2.072836e-51 | 1.368977e-48 |
| MsG0280007632.01 | MsG0580029127.01 | 0.805833 | 1.102888e-49 | 5.894514e-47 |
| MsG0280007787.01 | MsG0580029127.01 | 0.804560 | 2.037182e-49 | 1.053676e-46 |
| MsG0280008614.01 | MsG0580029127.01 | 0.863866 | 1.833589e-64 | 5.642297e-61 |
| MsG0280008764.01 | MsG0580029127.01 | 0.812805 | 3.524025e-51 | 2.262202e-48 |
| MsG0280008909.01 | MsG0580029127.01 | 0.830652 | 2.602558e-55 | 2.759283e-52 |
| MsG0280009794.01 | MsG0580029127.01 | 0.892489 | 1.513762e-74 | 1.387447e-70 |
| MsG0280010002.01 | MsG0580029127.01 | 0.834633 | 2.677816e-56 | 3.196328e-53 |
| MsG0280010015.01 | MsG0580029127.01 | 0.857823 | 1.255268e-62 | 3.138331e-59 |
| MsG0280010176.01 | MsG0580029127.01 | 0.830710 | 2.518820e-55 | 2.675183e-52 |
| MsG0280010489.01 | MsG0580029127.01 | 0.855429 | 6.347633e-62 | 1.465136e-58 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029127.01.T01 | MTR_5g081560 | 74.779 | 226 | 37 | 5 | 20 | 242 | 3 | 211 | 1.11e-108 | 312 |
| MsG0580029127.01.T01 | MTR_7g065920 | 45.161 | 217 | 95 | 7 | 30 | 242 | 38 | 234 | 1.95e-44 | 149 |
| MsG0580029127.01.T01 | MTR_3g069730 | 46.018 | 226 | 79 | 8 | 20 | 238 | 24 | 213 | 7.67e-44 | 147 |
| MsG0580029127.01.T01 | MTR_3g069760 | 54.622 | 119 | 31 | 3 | 76 | 189 | 46 | 146 | 1.64e-28 | 107 |
| MsG0580029127.01.T01 | MTR_2g016520 | 31.507 | 146 | 75 | 3 | 104 | 240 | 153 | 282 | 8.30e-17 | 78.2 |
| MsG0580029127.01.T01 | MTR_4g086500 | 32.812 | 192 | 85 | 6 | 61 | 240 | 150 | 309 | 3.25e-14 | 71.2 |
| MsG0580029127.01.T01 | MTR_8g086550 | 31.771 | 192 | 87 | 6 | 61 | 240 | 150 | 309 | 3.80e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029127.01.T01 | AT5G05830 | 49.718 | 177 | 66 | 5 | 71 | 242 | 45 | 203 | 1.86e-47 | 156 |
| MsG0580029127.01.T01 | AT5G01070 | 41.958 | 143 | 66 | 3 | 104 | 242 | 75 | 204 | 1.51e-26 | 102 |
| MsG0580029127.01.T01 | AT2G37950 | 40.559 | 143 | 63 | 5 | 104 | 242 | 81 | 205 | 2.70e-23 | 94.0 |
| MsG0580029127.01.T01 | AT5G59000 | 31.963 | 219 | 81 | 6 | 73 | 240 | 28 | 229 | 1.51e-22 | 92.4 |
| MsG0580029127.01.T01 | AT2G34200 | 46.341 | 82 | 24 | 3 | 104 | 178 | 99 | 167 | 8.97e-14 | 68.6 |
| MsG0580029127.01.T01 | AT2G34200 | 46.341 | 82 | 24 | 3 | 104 | 178 | 99 | 167 | 8.97e-14 | 68.6 |
Find 53 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCTTGGTTCAAGATTAA+AGG | 0.278430 | 5:-92681290 | MsG0580029127.01.T01:CDS |
| TAGGATTTGTCATCTTAGTA+TGG | 0.302408 | 5:-92681399 | MsG0580029127.01.T01:CDS |
| TTCTGATGTTAAGGTGCATT+TGG | 0.316270 | 5:-92681441 | MsG0580029127.01.T01:CDS |
| GAATTTCCTTCTAGCATGTA+TGG | 0.346946 | 5:-92679523 | MsG0580029127.01.T01:CDS |
| GATATGACAAATCATGAATC+TGG | 0.374563 | 5:-92681377 | MsG0580029127.01.T01:CDS |
| ATAAGGTGGAGAGGGATTGT+AGG | 0.391162 | 5:-92681418 | MsG0580029127.01.T01:CDS |
| GTTTCGCCTTTGTCATATCA+TGG | 0.410272 | 5:-92679501 | MsG0580029127.01.T01:CDS |
| CCCTCCATTGTACCACCAAC+TGG | 0.414352 | 5:-92679597 | MsG0580029127.01.T01:CDS |
| ATGTTCAGTGGAGTTGGATC+TGG | 0.431278 | 5:-92681480 | MsG0580029127.01.T01:CDS |
| TTTGATCCTCCTCATTTAAC+CGG | 0.432004 | 5:+92681576 | None:intergenic |
| ATAAGCATTGTGCTGAGGCT+TGG | 0.438291 | 5:-92681304 | MsG0580029127.01.T01:CDS |
| GATCAAAGGTGTGAGATTGT+AGG | 0.451686 | 5:-92681560 | MsG0580029127.01.T01:CDS |
| TGTAGAGGTTTCTGATGTTA+AGG | 0.455190 | 5:-92681450 | MsG0580029127.01.T01:CDS |
| GCGAAACCATACATGCTAGA+AGG | 0.461154 | 5:+92679517 | None:intergenic |
| GGATCTGGAGGGTGGTGTAG+AGG | 0.478235 | 5:-92681465 | MsG0580029127.01.T01:CDS |
| TTTCAAAATGCAGGTAAATG+AGG | 0.481861 | 5:-92681675 | MsG0580029127.01.T01:intron |
| TCATGAATCTGGAATTCCTA+TGG | 0.482383 | 5:-92681366 | MsG0580029127.01.T01:CDS |
| ATCAGAATGTTCAGTGGAGT+TGG | 0.482682 | 5:-92681486 | MsG0580029127.01.T01:CDS |
| CGAGTTTCTGATGGTGGTGA+AGG | 0.510573 | 5:+92679573 | None:intergenic |
| TCTGGAATTCCTATGGAGCT+TGG | 0.510778 | 5:-92681359 | MsG0580029127.01.T01:CDS |
| TGTTAAGGTGCATTTGGATA+AGG | 0.511468 | 5:-92681435 | MsG0580029127.01.T01:CDS |
| GCATTTGGATAAGGTGGAGA+GGG | 0.524811 | 5:-92681426 | MsG0580029127.01.T01:CDS |
| TAAGGTGCATTTGGATAAGG+TGG | 0.527254 | 5:-92681432 | MsG0580029127.01.T01:CDS |
| CTCCTCATTTAACCGGTCAC+CGG | 0.540911 | 5:+92681583 | None:intergenic |
| CATTTGAACTTCCATAGCAC+CGG | 0.554330 | 5:+92679645 | None:intergenic |
| CACGGAGACTCGTCCGTTGT+CGG | 0.554573 | 5:+92682898 | None:intergenic |
| GATGTTCTAACTCCGGTGAC+CGG | 0.563674 | 5:-92681595 | MsG0580029127.01.T01:CDS |
| CTCCGGTGACCGGTTAAATG+AGG | 0.569406 | 5:-92681585 | MsG0580029127.01.T01:CDS |
| TCCAGTTGGTGGTACAATGG+AGG | 0.573022 | 5:+92679596 | None:intergenic |
| ACACAATGTAGCCGGTGCTA+TGG | 0.576578 | 5:-92679656 | MsG0580029127.01.T01:CDS |
| TTCAGTGGAGTTGGATCTGG+AGG | 0.577918 | 5:-92681477 | MsG0580029127.01.T01:CDS |
| TAGAACATCGTTCATTACTC+CGG | 0.582687 | 5:+92681609 | None:intergenic |
| TCAATTGCACACAATGTAGC+CGG | 0.585989 | 5:-92679664 | MsG0580029127.01.T01:CDS |
| GGTGGTGAAGGTCCAGTTGG+TGG | 0.586158 | 5:+92679585 | None:intergenic |
| TGCTCATAAGCATTGTGCTG+AGG | 0.590807 | 5:-92681309 | MsG0580029127.01.T01:CDS |
| TGCATTTGGATAAGGTGGAG+AGG | 0.590996 | 5:-92681427 | MsG0580029127.01.T01:CDS |
| GGTTAAATGAGGAGGATCAA+AGG | 0.593905 | 5:-92681574 | MsG0580029127.01.T01:CDS |
| CTTCACCACCATCAGAAACT+CGG | 0.596501 | 5:-92679572 | MsG0580029127.01.T01:CDS |
| AAATTCCGAGTTTCTGATGG+TGG | 0.598667 | 5:+92679567 | None:intergenic |
| GTGGAGTTGGATCTGGAGGG+TGG | 0.603058 | 5:-92681473 | MsG0580029127.01.T01:CDS |
| CCAGTTGGTGGTACAATGGA+GGG | 0.603655 | 5:+92679597 | None:intergenic |
| AGGTCCAGTTGGTGGTACAA+TGG | 0.605202 | 5:+92679593 | None:intergenic |
| AATGAACGATGTTCTAACTC+CGG | 0.609785 | 5:-92681602 | MsG0580029127.01.T01:CDS |
| GATGGTGGTGAAGGTCCAGT+TGG | 0.613111 | 5:+92679582 | None:intergenic |
| TAGACAACAATGTATGTCAC+CGG | 0.620225 | 5:-92681628 | MsG0580029127.01.T01:CDS |
| TATCAACGCATGTCCGACAA+CGG | 0.620657 | 5:-92682911 | None:intergenic |
| AACAGAACTTGTGAAATCTG+TGG | 0.623786 | 5:-92679688 | MsG0580029127.01.T01:CDS |
| CGGTGACCGGTTAAATGAGG+AGG | 0.626754 | 5:-92681582 | MsG0580029127.01.T01:CDS |
| ATCTGAATCAGAATGTTCAG+TGG | 0.639058 | 5:-92681492 | MsG0580029127.01.T01:CDS |
| TCAGTGGAGTTGGATCTGGA+GGG | 0.641761 | 5:-92681476 | MsG0580029127.01.T01:CDS |
| AAGTTACACAGGAATTCAAG+AGG | 0.657142 | 5:+92679459 | None:intergenic |
| AGTTACACAGGAATTCAAGA+GGG | 0.673281 | 5:+92679460 | None:intergenic |
| GAGTACATATCTATGAAACA+CGG | 0.727065 | 5:+92682880 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTTATCATAATAATA+TGG | - | Chr5:92680237-92680256 | MsG0580029127.01.T01:intron | 10.0% |
| !! | AAATTGAACATATAATTGTA+TGG | - | Chr5:92682192-92682211 | MsG0580029127.01.T01:intron | 15.0% |
| !! | AATATATTGAAATCAAAACT+TGG | + | Chr5:92682281-92682300 | None:intergenic | 15.0% |
| !! | TCGTAGTTATAATATAAATT+CGG | + | Chr5:92680030-92680049 | None:intergenic | 15.0% |
| !!! | AATTATACAATCTTTTTTAG+AGG | + | Chr5:92680066-92680085 | None:intergenic | 15.0% |
| !! | AATGGTTGAAAGAAAAATAT+TGG | - | Chr5:92681968-92681987 | MsG0580029127.01.T01:intron | 20.0% |
| !! | AATGTAAAGTGAAATTTGAA+AGG | - | Chr5:92682504-92682523 | MsG0580029127.01.T01:intron | 20.0% |
| !! | ACATATCAACTAAAATATAG+TGG | + | Chr5:92681187-92681206 | None:intergenic | 20.0% |
| !! | AGTAACAAAAAAGAAAAAGT+GGG | - | Chr5:92679757-92679776 | MsG0580029127.01.T01:intron | 20.0% |
| !! | ATAGAAACAAACAAAAGAAT+AGG | - | Chr5:92680345-92680364 | MsG0580029127.01.T01:intron | 20.0% |
| !! | ATGCGAATTCAATTAATTTA+AGG | + | Chr5:92679891-92679910 | None:intergenic | 20.0% |
| !! | ATTTACAACTTTATTCCAAA+AGG | + | Chr5:92681136-92681155 | None:intergenic | 20.0% |
| !! | GAATCTAATAGAGAAAAATT+TGG | + | Chr5:92680394-92680413 | None:intergenic | 20.0% |
| !! | TAAAAACAAGCAATATAGAA+AGG | + | Chr5:92680226-92680245 | None:intergenic | 20.0% |
| !! | TCTATGCAATAATAGAAAAA+TGG | + | Chr5:92680330-92680349 | None:intergenic | 20.0% |
| !! | TTATCATAATAATATGGACA+TGG | - | Chr5:92680243-92680262 | MsG0580029127.01.T01:intron | 20.0% |
| !! | TTGTGTATGTCAATAAATTT+GGG | - | Chr5:92681395-92681414 | MsG0580029127.01.T01:CDS | 20.0% |
| !! | TTTACAACTTTATTCCAAAA+GGG | + | Chr5:92681135-92681154 | None:intergenic | 20.0% |
| !! | TTTGTGTATGTCAATAAATT+TGG | - | Chr5:92681394-92681413 | MsG0580029127.01.T01:CDS | 20.0% |
| !!! | AGAATTTTTTTTGTCCTTTT+CGG | + | Chr5:92679550-92679569 | None:intergenic | 20.0% |
| !!! | ATGTTTTTGCAAAAATGATT+TGG | - | Chr5:92681040-92681059 | MsG0580029127.01.T01:intron | 20.0% |
| !!! | TTTCTTTTTGTGAAAAATTG+TGG | - | Chr5:92681722-92681741 | MsG0580029127.01.T01:intron | 20.0% |
| ! | AAAAGAAAAAAGAATCCCTT+TGG | - | Chr5:92682168-92682187 | MsG0580029127.01.T01:intron | 25.0% |
| ! | AAACTATCTTCATCAAACTT+TGG | - | Chr5:92680619-92680638 | MsG0580029127.01.T01:intron | 25.0% |
| ! | AAAGAAAAAAGAATCCCTTT+GGG | - | Chr5:92682169-92682188 | MsG0580029127.01.T01:intron | 25.0% |
| ! | AAAGTCAAATAGCTAAGATA+AGG | + | Chr5:92681767-92681786 | None:intergenic | 25.0% |
| ! | AACAAAAATCTTAAGACATC+CGG | + | Chr5:92681613-92681632 | None:intergenic | 25.0% |
| ! | AATCAAAACTTGGCAAATAA+AGG | + | Chr5:92682271-92682290 | None:intergenic | 25.0% |
| ! | AATCTAATGCACTTAAAAAG+TGG | + | Chr5:92679991-92680010 | None:intergenic | 25.0% |
| ! | ACTACAGGAAGATTAATATA+CGG | - | Chr5:92682477-92682496 | MsG0580029127.01.T01:intron | 25.0% |
| ! | AGATAGAACTGATTATTGAT+AGG | - | Chr5:92682544-92682563 | MsG0580029127.01.T01:intron | 25.0% |
| ! | AGGATTAGATTATTCAACAA+GGG | + | Chr5:92680196-92680215 | None:intergenic | 25.0% |
| ! | ATAATAGAAAGGGTAAGAAA+TGG | - | Chr5:92681950-92681969 | MsG0580029127.01.T01:intron | 25.0% |
| ! | ATATCTAATGATCAAACTAC+AGG | - | Chr5:92682462-92682481 | MsG0580029127.01.T01:intron | 25.0% |
| ! | ATCTACAATTTCATTCAATG+TGG | + | Chr5:92681245-92681264 | None:intergenic | 25.0% |
| ! | ATCTCATTAGACCATTAATT+TGG | - | Chr5:92679795-92679814 | MsG0580029127.01.T01:intron | 25.0% |
| ! | ATTGAAAATGAAGTTGAAGA+AGG | + | Chr5:92679627-92679646 | None:intergenic | 25.0% |
| ! | CAAATGCTATATTTGTCAAA+TGG | + | Chr5:92679828-92679847 | None:intergenic | 25.0% |
| ! | CAATATAGAAAGGTTAAAAC+AGG | + | Chr5:92680216-92680235 | None:intergenic | 25.0% |
| ! | GAGCTACATTATAATAGAAA+GGG | - | Chr5:92681940-92681959 | MsG0580029127.01.T01:intron | 25.0% |
| ! | GAGTAACAAAAAAGAAAAAG+TGG | - | Chr5:92679756-92679775 | MsG0580029127.01.T01:intron | 25.0% |
| ! | GCAAGTTAAATTGTTAATGT+TGG | - | Chr5:92682571-92682590 | MsG0580029127.01.T01:intron | 25.0% |
| ! | GTAACAAAAAAGAAAAAGTG+GGG | - | Chr5:92679758-92679777 | MsG0580029127.01.T01:intron | 25.0% |
| ! | TACTTTGTACATTTCACTAT+AGG | - | Chr5:92682367-92682386 | MsG0580029127.01.T01:intron | 25.0% |
| ! | TATATGTTCAATTTCCCAAA+GGG | + | Chr5:92682186-92682205 | None:intergenic | 25.0% |
| ! | TGAGCTACATTATAATAGAA+AGG | - | Chr5:92681939-92681958 | MsG0580029127.01.T01:intron | 25.0% |
| ! | TTATATGTTCAATTTCCCAA+AGG | + | Chr5:92682187-92682206 | None:intergenic | 25.0% |
| ! | TTTGTGAAAAATTGTGGATA+AGG | - | Chr5:92681728-92681747 | MsG0580029127.01.T01:intron | 25.0% |
| !!! | AAGATTTTTGTTTGAAGATG+CGG | - | Chr5:92681621-92681640 | MsG0580029127.01.T01:CDS | 25.0% |
| !!! | AGCTAGAAATATTAGCTTTT+AGG | - | Chr5:92681441-92681460 | MsG0580029127.01.T01:CDS | 25.0% |
| !!! | ATTGAGCTGATTTTTCAATT+TGG | + | Chr5:92682128-92682147 | None:intergenic | 25.0% |
| !!! | CTGCTTTTATCTTCAATTAT+GGG | - | Chr5:92682086-92682105 | MsG0580029127.01.T01:intron | 25.0% |
| !!! | GGGATTCTTTTTTCTTTTAT+TGG | + | Chr5:92682166-92682185 | None:intergenic | 25.0% |
| AAAAAGCCATGATATGACAA+AGG | + | Chr5:92682884-92682903 | None:intergenic | 30.0% | |
| AAAGATATTACTCTACACTG+TGG | + | Chr5:92680544-92680563 | None:intergenic | 30.0% | |
| AAATCAATTCACTTCTGTGA+CGG | + | Chr5:92681301-92681320 | None:intergenic | 30.0% | |
| ACAAACATGGAACTAAACAT+AGG | - | Chr5:92681567-92681586 | MsG0580029127.01.T01:CDS | 30.0% | |
| ACTATGAAATGTCTTGATAG+TGG | - | Chr5:92681858-92681877 | MsG0580029127.01.T01:intron | 30.0% | |
| ATGGTGCAAATCCAAATTAA+TGG | + | Chr5:92679809-92679828 | None:intergenic | 30.0% | |
| CAGGATTAGATTATTCAACA+AGG | + | Chr5:92680197-92680216 | None:intergenic | 30.0% | |
| CCATAATTGAAGATAAAAGC+AGG | + | Chr5:92682088-92682107 | None:intergenic | 30.0% | |
| CTAATGAGATGTGAAATAAG+TGG | + | Chr5:92679785-92679804 | None:intergenic | 30.0% | |
| CTCAACAAAAAAGAACCAAA+AGG | + | Chr5:92680585-92680604 | None:intergenic | 30.0% | |
| GAGTACATATCTATGAAACA+CGG | + | Chr5:92679499-92679518 | None:intergenic | 30.0% | |
| GATATGACAAATCATGAATC+TGG | - | Chr5:92680999-92681018 | MsG0580029127.01.T01:intron | 30.0% | |
| TAATAATATGGACATGGACA+TGG | - | Chr5:92680249-92680268 | MsG0580029127.01.T01:intron | 30.0% | |
| TAGGATTTGTCATCTTAGTA+TGG | - | Chr5:92680977-92680996 | MsG0580029127.01.T01:intron | 30.0% | |
| TTACATGAAGATTCTCATCT+TGG | - | Chr5:92680675-92680694 | MsG0580029127.01.T01:intron | 30.0% | |
| TTTCAAAATGCAGGTAAATG+AGG | - | Chr5:92680701-92680720 | MsG0580029127.01.T01:intron | 30.0% | |
| ! | ACCACATTATCCAAAGTATT+TGG | + | Chr5:92681827-92681846 | None:intergenic | 30.0% |
| ! | ACTAACCCAAACATGATTTT+GGG | - | Chr5:92681540-92681559 | MsG0580029127.01.T01:CDS | 30.0% |
| ! | CACACAATTCATTAACCTTT+TGG | - | Chr5:92680567-92680586 | MsG0580029127.01.T01:intron | 30.0% |
| ! | CATTTTCTGTTCTCATGATA+TGG | - | Chr5:92679680-92679699 | MsG0580029127.01.T01:CDS | 30.0% |
| ! | GTTTAAACTAAGAAGTACAG+AGG | + | Chr5:92679587-92679606 | None:intergenic | 30.0% |
| !! | AATTGAATTCGCATTGACTA+TGG | - | Chr5:92679897-92679916 | MsG0580029127.01.T01:intron | 30.0% |
| !! | CCTGCTTTTATCTTCAATTA+TGG | - | Chr5:92682085-92682104 | MsG0580029127.01.T01:intron | 30.0% |
| AACAGAAAATGCATGGAGAA+GGG | + | Chr5:92679671-92679690 | None:intergenic | 35.0% | |
| AACAGAACTTGTGAAATCTG+TGG | - | Chr5:92682688-92682707 | MsG0580029127.01.T01:intron | 35.0% | |
| AACTATGCTTGAATCCTAGT+TGG | + | Chr5:92682023-92682042 | None:intergenic | 35.0% | |
| AATCCTAGTTGGGATGTAAA+TGG | + | Chr5:92682012-92682031 | None:intergenic | 35.0% | |
| AATGAACGATGTTCTAACTC+CGG | - | Chr5:92680774-92680793 | MsG0580029127.01.T01:intron | 35.0% | |
| ACTATGCTTGAATCCTAGTT+GGG | + | Chr5:92682022-92682041 | None:intergenic | 35.0% | |
| ATATTACTCTACACTGTGGT+AGG | + | Chr5:92680540-92680559 | None:intergenic | 35.0% | |
| ATCCTAGTTGGGATGTAAAT+GGG | + | Chr5:92682011-92682030 | None:intergenic | 35.0% | |
| ATCTGAATCAGAATGTTCAG+TGG | - | Chr5:92680884-92680903 | MsG0580029127.01.T01:intron | 35.0% | |
| CAAAAATTCCGAGTTTCTGA+TGG | + | Chr5:92682815-92682834 | None:intergenic | 35.0% | |
| CTATCTTCATCAAACTTTGG+TGG | - | Chr5:92680622-92680641 | MsG0580029127.01.T01:intron | 35.0% | |
| GAAGTGAGAGATACATATAC+CGG | - | Chr5:92681591-92681610 | MsG0580029127.01.T01:CDS | 35.0% | |
| GAATTTCCTTCTAGCATGTA+TGG | - | Chr5:92682853-92682872 | MsG0580029127.01.T01:intron | 35.0% | |
| GCCAAATACTTTGGATAATG+TGG | - | Chr5:92681823-92681842 | MsG0580029127.01.T01:intron | 35.0% | |
| TAGAACATCGTTCATTACTC+CGG | + | Chr5:92680770-92680789 | None:intergenic | 35.0% | |
| TAGACAACAATGTATGTCAC+CGG | - | Chr5:92680748-92680767 | MsG0580029127.01.T01:intron | 35.0% | |
| TCATGAGAACAGAAAATGCA+TGG | + | Chr5:92679678-92679697 | None:intergenic | 35.0% | |
| TCATTAGATATACGCGCATT+TGG | + | Chr5:92682453-92682472 | None:intergenic | 35.0% | |
| TGTAGAGGTTTCTGATGTTA+AGG | - | Chr5:92680926-92680945 | MsG0580029127.01.T01:intron | 35.0% | |
| TGTTAAGGTGCATTTGGATA+AGG | - | Chr5:92680941-92680960 | MsG0580029127.01.T01:intron | 35.0% | |
| TTCCTCCCAAAATCATGTTT+GGG | + | Chr5:92681548-92681567 | None:intergenic | 35.0% | |
| TTCTGATGTTAAGGTGCATT+TGG | - | Chr5:92680935-92680954 | MsG0580029127.01.T01:intron | 35.0% | |
| TTTCACTATAGGAGCTACTA+AGG | - | Chr5:92682378-92682397 | MsG0580029127.01.T01:intron | 35.0% | |
| TTTGATCCTCCTCATTTAAC+CGG | + | Chr5:92680803-92680822 | None:intergenic | 35.0% | |
| ! | AGTACTAGTATACACCCTTT+TGG | - | Chr5:92681118-92681137 | MsG0580029127.01.T01:intron | 35.0% |
| ! | CATCAGAAACTCGGAATTTT+TGG | - | Chr5:92682813-92682832 | MsG0580029127.01.T01:intron | 35.0% |
| ! | CTGCTAAGAAGTATGAAACT+TGG | - | Chr5:92682216-92682235 | MsG0580029127.01.T01:intron | 35.0% |
| ! | CTTAAAAAGTGGCTAGTCAT+TGG | + | Chr5:92679980-92679999 | None:intergenic | 35.0% |
| ! | GACTAACCCAAACATGATTT+TGG | - | Chr5:92681539-92681558 | MsG0580029127.01.T01:CDS | 35.0% |
| ! | GCGAATAAAGTGTCAAACTT+AGG | + | Chr5:92682599-92682618 | None:intergenic | 35.0% |
| ! | GGAGTGTCTGAAAAACAAAA+AGG | - | Chr5:92680837-92680856 | MsG0580029127.01.T01:intron | 35.0% |
| ! | TCATGAATCTGGAATTCCTA+TGG | - | Chr5:92681010-92681029 | MsG0580029127.01.T01:intron | 35.0% |
| ! | TCATTTGCTGCCAAATACTT+TGG | - | Chr5:92681814-92681833 | MsG0580029127.01.T01:intron | 35.0% |
| ! | TCTTGGTTGTTTCAAAATGC+AGG | - | Chr5:92680692-92680711 | MsG0580029127.01.T01:intron | 35.0% |
| ! | TTTTGTGTTTCGATATCTCG+AGG | - | Chr5:92682313-92682332 | MsG0580029127.01.T01:intron | 35.0% |
| AAATTCCGAGTTTCTGATGG+TGG | + | Chr5:92682812-92682831 | None:intergenic | 40.0% | |
| ATCAGAATGTTCAGTGGAGT+TGG | - | Chr5:92680890-92680909 | MsG0580029127.01.T01:intron | 40.0% | |
| ATCCCATTTACATCCCAACT+AGG | - | Chr5:92682006-92682025 | MsG0580029127.01.T01:intron | 40.0% | |
| CAAAAACATCCAAGCTCCAT+AGG | + | Chr5:92681029-92681048 | None:intergenic | 40.0% | |
| CATTCTTCAAGTCACTTGTG+TGG | - | Chr5:92681648-92681667 | MsG0580029127.01.T01:CDS | 40.0% | |
| CATTTGAACTTCCATAGCAC+CGG | + | Chr5:92682734-92682753 | None:intergenic | 40.0% | |
| GAACAGAAAATGCATGGAGA+AGG | + | Chr5:92679672-92679691 | None:intergenic | 40.0% | |
| GAGAAAAGTGAATGCCGAAA+AGG | - | Chr5:92679533-92679552 | MsG0580029127.01.T01:CDS | 40.0% | |
| GAGAGAATCCTAAACACTCT+AGG | + | Chr5:92681697-92681716 | None:intergenic | 40.0% | |
| GGAATCATTTCTGCAACTGA+AGG | - | Chr5:92681483-92681502 | MsG0580029127.01.T01:CDS | 40.0% | |
| GGAGAAGGGAAAAGAAAATG+AGG | + | Chr5:92679657-92679676 | None:intergenic | 40.0% | |
| GGCAGCAAATGAATATGCTA+AGG | + | Chr5:92681806-92681825 | None:intergenic | 40.0% | |
| GGTTAAATGAGGAGGATCAA+AGG | - | Chr5:92680802-92680821 | MsG0580029127.01.T01:intron | 40.0% | |
| GTTCCTCCCAAAATCATGTT+TGG | + | Chr5:92681549-92681568 | None:intergenic | 40.0% | |
| GTTGCATCTCTCTCTCTATA+GGG | - | Chr5:92680472-92680491 | MsG0580029127.01.T01:intron | 40.0% | |
| GTTTCGCCTTTGTCATATCA+TGG | - | Chr5:92682875-92682894 | MsG0580029127.01.T01:CDS | 40.0% | |
| TAAGGTGCATTTGGATAAGG+TGG | - | Chr5:92680944-92680963 | MsG0580029127.01.T01:intron | 40.0% | |
| TCAATTGCACACAATGTAGC+CGG | - | Chr5:92682712-92682731 | MsG0580029127.01.T01:intron | 40.0% | |
| TGCTAAGGACAAGCAACAAA+TGG | + | Chr5:92681791-92681810 | None:intergenic | 40.0% | |
| TGTTGCATCTCTCTCTCTAT+AGG | - | Chr5:92680471-92680490 | MsG0580029127.01.T01:intron | 40.0% | |
| ! | AACCCAAACATGATTTTGGG+AGG | - | Chr5:92681543-92681562 | MsG0580029127.01.T01:CDS | 40.0% |
| ! | GAGGCTTGGTTCAAGATTAA+AGG | - | Chr5:92681086-92681105 | MsG0580029127.01.T01:intron | 40.0% |
| ! | GATCAAAGGTGTGAGATTGT+AGG | - | Chr5:92680816-92680835 | MsG0580029127.01.T01:intron | 40.0% |
| ! | GTTACTCTAAGCGAGTTTTG+CGG | + | Chr5:92679743-92679762 | None:intergenic | 40.0% |
| ! | TTACTCTAAGCGAGTTTTGC+GGG | + | Chr5:92679742-92679761 | None:intergenic | 40.0% |
| !! | GACTATGGTTGATAATCGCA+TGG | - | Chr5:92679912-92679931 | MsG0580029127.01.T01:intron | 40.0% |
| !! | GATTTTGGGAGGAACAAACA+TGG | - | Chr5:92681554-92681573 | MsG0580029127.01.T01:CDS | 40.0% |
| !! | GGTAGAATTGATTTGTGCAC+TGG | - | Chr5:92681462-92681481 | MsG0580029127.01.T01:CDS | 40.0% |
| !!! | AGAAACTCGGAATTTTTGGC+AGG | - | Chr5:92682817-92682836 | MsG0580029127.01.T01:intron | 40.0% |
| !!! | GAAACTCGGAATTTTTGGCA+GGG | - | Chr5:92682818-92682837 | MsG0580029127.01.T01:intron | 40.0% |
| ATAAGGTGGAGAGGGATTGT+AGG | - | Chr5:92680958-92680977 | MsG0580029127.01.T01:intron | 45.0% | |
| ATGTTCAGTGGAGTTGGATC+TGG | - | Chr5:92680896-92680915 | MsG0580029127.01.T01:intron | 45.0% | |
| CTTCACCACCATCAGAAACT+CGG | - | Chr5:92682804-92682823 | MsG0580029127.01.T01:intron | 45.0% | |
| GATAATCGCATGGATTCACG+TGG | - | Chr5:92679922-92679941 | MsG0580029127.01.T01:intron | 45.0% | |
| GCATTTGGATAAGGTGGAGA+GGG | - | Chr5:92680950-92680969 | MsG0580029127.01.T01:intron | 45.0% | |
| GCGAAACCATACATGCTAGA+AGG | + | Chr5:92682862-92682881 | None:intergenic | 45.0% | |
| TGCATTTGGATAAGGTGGAG+AGG | - | Chr5:92680949-92680968 | MsG0580029127.01.T01:intron | 45.0% | |
| ! | ATAAGCATTGTGCTGAGGCT+TGG | - | Chr5:92681072-92681091 | MsG0580029127.01.T01:intron | 45.0% |
| ! | GCGATGATCCTAGAGTGTTT+AGG | - | Chr5:92681686-92681705 | MsG0580029127.01.T01:intron | 45.0% |
| ! | TCTGGAATTCCTATGGAGCT+TGG | - | Chr5:92681017-92681036 | MsG0580029127.01.T01:intron | 45.0% |
| ! | TGCTCATAAGCATTGTGCTG+AGG | - | Chr5:92681067-92681086 | MsG0580029127.01.T01:intron | 45.0% |
| !!! | GGAATTTTTGGCAGGGACAT+CGG | - | Chr5:92682825-92682844 | MsG0580029127.01.T01:intron | 45.0% |
| CTCCTCATTTAACCGGTCAC+CGG | + | Chr5:92680796-92680815 | None:intergenic | 50.0% | |
| GATGTTCTAACTCCGGTGAC+CGG | - | Chr5:92680781-92680800 | MsG0580029127.01.T01:intron | 50.0% | |
| TCAGTGGAGTTGGATCTGGA+GGG | - | Chr5:92680900-92680919 | MsG0580029127.01.T01:intron | 50.0% | |
| TTCAGTGGAGTTGGATCTGG+AGG | - | Chr5:92680899-92680918 | MsG0580029127.01.T01:intron | 50.0% | |
| ! | ACACAATGTAGCCGGTGCTA+TGG | - | Chr5:92682720-92682739 | MsG0580029127.01.T01:intron | 50.0% |
| !! | AGGTCCAGTTGGTGGTACAA+TGG | + | Chr5:92682786-92682805 | None:intergenic | 50.0% |
| !! | CCAGTTGGTGGTACAATGGA+GGG | + | Chr5:92682782-92682801 | None:intergenic | 50.0% |
| !! | CGAGTTTCTGATGGTGGTGA+AGG | + | Chr5:92682806-92682825 | None:intergenic | 50.0% |
| !! | TCCAGTTGGTGGTACAATGG+AGG | + | Chr5:92682783-92682802 | None:intergenic | 50.0% |
| CCCTCCATTGTACCACCAAC+TGG | - | Chr5:92682779-92682798 | MsG0580029127.01.T01:intron | 55.0% | |
| CGGTGACCGGTTAAATGAGG+AGG | - | Chr5:92680794-92680813 | MsG0580029127.01.T01:intron | 55.0% | |
| CTCCGGTGACCGGTTAAATG+AGG | - | Chr5:92680791-92680810 | MsG0580029127.01.T01:intron | 55.0% | |
| ! | GATGGTGGTGAAGGTCCAGT+TGG | + | Chr5:92682797-92682816 | None:intergenic | 55.0% |
| CACGGAGACTCGTCCGTTGT+CGG | + | Chr5:92679481-92679500 | None:intergenic | 60.0% | |
| GGATCTGGAGGGTGGTGTAG+AGG | - | Chr5:92680911-92680930 | MsG0580029127.01.T01:intron | 60.0% | |
| GGTGGTGAAGGTCCAGTTGG+TGG | + | Chr5:92682794-92682813 | None:intergenic | 60.0% | |
| GTGGAGTTGGATCTGGAGGG+TGG | - | Chr5:92680903-92680922 | MsG0580029127.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 92679474 | 92682924 | 92679474 | ID=MsG0580029127.01;Name=MsG0580029127.01 |
| Chr5 | mRNA | 92679474 | 92682924 | 92679474 | ID=MsG0580029127.01.T01;Parent=MsG0580029127.01;Name=MsG0580029127.01.T01;_AED=0.43;_eAED=0.45;_QI=0|0|0.33|0.66|0.5|0.33|3|0|242 |
| Chr5 | exon | 92682868 | 92682924 | 92682868 | ID=MsG0580029127.01.T01:exon:26523;Parent=MsG0580029127.01.T01 |
| Chr5 | exon | 92681284 | 92681684 | 92681284 | ID=MsG0580029127.01.T01:exon:26522;Parent=MsG0580029127.01.T01 |
| Chr5 | exon | 92679474 | 92679744 | 92679474 | ID=MsG0580029127.01.T01:exon:26521;Parent=MsG0580029127.01.T01 |
| Chr5 | CDS | 92682868 | 92682924 | 92682868 | ID=MsG0580029127.01.T01:cds;Parent=MsG0580029127.01.T01 |
| Chr5 | CDS | 92681284 | 92681684 | 92681284 | ID=MsG0580029127.01.T01:cds;Parent=MsG0580029127.01.T01 |
| Chr5 | CDS | 92679474 | 92679744 | 92679474 | ID=MsG0580029127.01.T01:cds;Parent=MsG0580029127.01.T01 |
| Gene Sequence |
| Protein sequence |
