Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014668.01.T01 | XP_013460115.1 | 88.43 | 484 | 5 | 3 | 1 | 436 | 1 | 481 | 0 | 854 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014668.01.T01 | F4KGE8 | 55.285 | 492 | 156 | 8 | 1 | 436 | 76 | 559 | 2.52E-159 | 464 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014668.01.T01 | A0A072UXH5 | 88.430 | 484 | 5 | 3 | 1 | 436 | 1 | 481 | 0.0 | 854 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003920.01 | MsG0380014668.01 | 0.802006 | 6.885145e-49 | 3.335681e-46 |
| MsG0180005919.01 | MsG0380014668.01 | 0.821361 | 4.205872e-53 | 3.414291e-50 |
| MsG0180006000.01 | MsG0380014668.01 | 0.802288 | 6.023916e-49 | 2.939659e-46 |
| MsG0380014668.01 | MsG0380016920.01 | 0.842661 | 2.256309e-58 | 3.444692e-55 |
| MsG0380014668.01 | MsG0380017159.01 | 0.803079 | 4.136894e-49 | 2.059690e-46 |
| MsG0380014668.01 | MsG0380017996.01 | 0.853622 | 2.116103e-61 | 4.600395e-58 |
| MsG0380014668.01 | MsG0480018879.01 | 0.800410 | 1.460038e-48 | 6.793773e-46 |
| MsG0380014668.01 | MsG0480020699.01 | 0.807574 | 4.729941e-50 | 2.643668e-47 |
| MsG0380014668.01 | MsG0480020847.01 | 0.813883 | 2.043149e-51 | 1.350455e-48 |
| MsG0380014668.01 | MsG0480022076.01 | 0.806056 | 9.901835e-50 | 5.322419e-47 |
| MsG0380014668.01 | MsG0480023008.01 | 0.814847 | 1.250967e-51 | 8.486891e-49 |
| MsG0380014668.01 | MsG0580024317.01 | 0.846210 | 2.505702e-59 | 4.280614e-56 |
| MsG0380014668.01 | MsG0580024358.01 | 0.807691 | 4.465747e-50 | 2.503728e-47 |
| MsG0380014668.01 | MsG0580024426.01 | 0.800827 | 1.200612e-48 | 5.645678e-46 |
| MsG0380014668.01 | MsG0580026145.01 | 0.819081 | 1.400407e-52 | 1.067028e-49 |
| MsG0380014668.01 | MsG0580028060.01 | 0.802634 | 5.110968e-49 | 2.516124e-46 |
| MsG0380014668.01 | MsG0580029127.01 | 0.822005 | 2.985879e-53 | 2.468398e-50 |
| MsG0380014668.01 | MsG0780036815.01 | 0.822207 | 2.680415e-53 | 2.228751e-50 |
| MsG0380014668.01 | MsG0780038332.01 | 0.816039 | 6.792036e-52 | 4.760622e-49 |
| MsG0380014668.01 | MsG0780040472.01 | 0.853368 | 2.503161e-61 | 5.395974e-58 |
| MsG0380014668.01 | MsG0780040509.01 | 0.818612 | 1.790163e-52 | 1.346363e-49 |
| MsG0380014668.01 | MsG0780041735.01 | 0.812325 | 4.487880e-51 | 2.844876e-48 |
| MsG0380014668.01 | MsG0880042779.01 | 0.801511 | 8.699731e-49 | 4.162321e-46 |
| MsG0380014668.01 | MsG0880043614.01 | 0.864778 | 9.515148e-65 | 3.023883e-61 |
| MsG0380014668.01 | MsG0880043637.01 | 0.803877 | 2.825894e-49 | 1.436272e-46 |
| MsG0380014668.01 | MsG0880044555.01 | 0.812190 | 4.801840e-51 | 3.032878e-48 |
| MsG0380014668.01 | MsG0880044782.01 | 0.833425 | 5.372746e-56 | 6.185013e-53 |
| MsG0380014668.01 | MsG0880045483.01 | 0.820347 | 7.195649e-53 | 5.679251e-50 |
| MsG0380014668.01 | MsG0880046059.01 | 0.805662 | 1.198258e-49 | 6.376016e-47 |
| MsG0380014668.01 | MsG0880046706.01 | 0.820913 | 5.334607e-53 | 4.277261e-50 |
| MsG0280009794.01 | MsG0380014668.01 | 0.841017 | 6.132870e-58 | 8.893298e-55 |
| MsG0280010015.01 | MsG0380014668.01 | 0.851492 | 8.566991e-61 | 1.737042e-57 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014668.01.T01 | MTR_3g462150 | 88.430 | 484 | 5 | 3 | 1 | 436 | 1 | 481 | 0.0 | 854 |
| MsG0380014668.01.T01 | MTR_4g025420 | 32.570 | 393 | 200 | 9 | 90 | 432 | 35 | 412 | 3.01e-63 | 210 |
| MsG0380014668.01.T01 | MTR_8g087400 | 29.639 | 415 | 241 | 9 | 63 | 432 | 50 | 458 | 6.56e-48 | 171 |
| MsG0380014668.01.T01 | MTR_2g075910 | 30.848 | 389 | 220 | 10 | 91 | 435 | 73 | 456 | 2.87e-45 | 164 |
| MsG0380014668.01.T01 | MTR_8g059485 | 30.026 | 383 | 218 | 10 | 91 | 432 | 72 | 445 | 2.47e-43 | 158 |
| MsG0380014668.01.T01 | MTR_8g059485 | 30.026 | 383 | 218 | 10 | 91 | 432 | 63 | 436 | 2.52e-43 | 158 |
| MsG0380014668.01.T01 | MTR_5g075180 | 31.579 | 361 | 218 | 9 | 92 | 432 | 88 | 439 | 3.79e-42 | 155 |
| MsG0380014668.01.T01 | MTR_0178s0030 | 28.645 | 391 | 215 | 7 | 93 | 432 | 145 | 522 | 4.14e-36 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014668.01.T01 | AT5G58960 | 55.285 | 492 | 156 | 8 | 1 | 436 | 1 | 484 | 7.00e-162 | 465 |
| MsG0380014668.01.T01 | AT5G58960 | 55.285 | 492 | 156 | 8 | 1 | 436 | 1 | 484 | 7.00e-162 | 465 |
| MsG0380014668.01.T01 | AT5G58960 | 55.285 | 492 | 156 | 8 | 1 | 436 | 76 | 559 | 2.57e-160 | 464 |
| MsG0380014668.01.T01 | AT2G45260 | 32.911 | 395 | 201 | 8 | 90 | 432 | 36 | 418 | 6.67e-64 | 212 |
| MsG0380014668.01.T01 | AT3G14870 | 30.345 | 435 | 239 | 10 | 43 | 432 | 46 | 461 | 3.47e-50 | 177 |
| MsG0380014668.01.T01 | AT3G14870 | 30.345 | 435 | 239 | 10 | 43 | 432 | 46 | 461 | 3.47e-50 | 177 |
| MsG0380014668.01.T01 | AT3G14870 | 30.345 | 435 | 239 | 10 | 43 | 432 | 46 | 461 | 3.47e-50 | 177 |
| MsG0380014668.01.T01 | AT3G14870 | 30.345 | 435 | 239 | 10 | 43 | 432 | 47 | 462 | 3.61e-50 | 177 |
| MsG0380014668.01.T01 | AT3G14870 | 30.345 | 435 | 239 | 10 | 43 | 432 | 50 | 465 | 4.39e-50 | 177 |
| MsG0380014668.01.T01 | AT1G29300 | 33.245 | 379 | 205 | 11 | 90 | 432 | 85 | 451 | 9.15e-47 | 167 |
| MsG0380014668.01.T01 | AT1G53380 | 29.820 | 389 | 222 | 7 | 90 | 432 | 67 | 450 | 1.66e-46 | 166 |
| MsG0380014668.01.T01 | AT1G53380 | 29.820 | 389 | 222 | 7 | 90 | 432 | 67 | 450 | 1.66e-46 | 166 |
| MsG0380014668.01.T01 | AT1G53380 | 29.820 | 389 | 222 | 7 | 90 | 432 | 67 | 450 | 1.66e-46 | 166 |
| MsG0380014668.01.T01 | AT1G53380 | 29.820 | 389 | 222 | 7 | 90 | 432 | 67 | 450 | 1.66e-46 | 166 |
| MsG0380014668.01.T01 | AT1G53380 | 29.820 | 389 | 222 | 7 | 90 | 432 | 67 | 450 | 1.66e-46 | 166 |
| MsG0380014668.01.T01 | AT3G60680 | 27.901 | 405 | 231 | 8 | 75 | 432 | 103 | 493 | 2.67e-43 | 159 |
| MsG0380014668.01.T01 | AT2G30380 | 33.518 | 361 | 192 | 10 | 94 | 432 | 76 | 410 | 5.97e-41 | 150 |
| MsG0380014668.01.T01 | AT4G34080 | 25.623 | 281 | 147 | 6 | 90 | 319 | 12 | 281 | 1.48e-23 | 100 |
| MsG0380014668.01.T01 | AT4G33320 | 24.739 | 287 | 153 | 7 | 90 | 324 | 12 | 287 | 3.59e-19 | 87.8 |
| MsG0380014668.01.T01 | AT4G36100 | 44.068 | 59 | 33 | 0 | 90 | 148 | 12 | 70 | 4.36e-11 | 63.2 |
Find 119 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTCTTCCATCTT+TGG | 0.231397 | 3:+58187311 | None:intergenic |
| ATGGATCCTGCTGAGCTTCT+TGG | 0.231526 | 3:-58187395 | MsG0380014668.01.T01:CDS |
| GTGCCAGCTGGTCAGGTTGT+AGG | 0.282373 | 3:-58187077 | MsG0380014668.01.T01:CDS |
| AGCTTAAATCCAGGACTAAC+TGG | 0.284394 | 3:+58187050 | None:intergenic |
| TCCTGGGGTGGTTTCCTGCT+TGG | 0.285355 | 3:+58187261 | None:intergenic |
| AAAGCAAATGGAAGCATTAA+TGG | 0.287144 | 3:-58188721 | MsG0380014668.01.T01:CDS |
| TTTGAAACCTTTCTCGTCAT+TGG | 0.325126 | 3:+58188984 | None:intergenic |
| TGGATCCTGCTGAGCTTCTT+GGG | 0.330421 | 3:-58187394 | MsG0380014668.01.T01:CDS |
| CCCTTAAAACATTTAAGTTC+TGG | 0.332741 | 3:+58186986 | None:intergenic |
| TGGGCGGGTGCCAGCTGGTC+AGG | 0.333732 | 3:-58187084 | MsG0380014668.01.T01:CDS |
| ATGAAGCAACCATACAGTTT+TGG | 0.367698 | 3:+58187208 | None:intergenic |
| CTGTGTTGAGAGAGAGGTTT+CGG | 0.374525 | 3:-58188569 | MsG0380014668.01.T01:CDS |
| GTTGTTGCTCTTTCTAATAA+TGG | 0.378913 | 3:-58188387 | MsG0380014668.01.T01:CDS |
| TCCGGTGGGCGGGTGCCAGC+TGG | 0.383399 | 3:-58187089 | MsG0380014668.01.T01:CDS |
| GGTGGTCGGAGAAGAGGTTT+TGG | 0.384786 | 3:-58188525 | MsG0380014668.01.T01:CDS |
| TGAGTTCCATCCACAGTATA+TGG | 0.389849 | 3:-58187129 | MsG0380014668.01.T01:CDS |
| GAAGAATGAAGTGAAGGTTA+AGG | 0.391718 | 3:-58188448 | MsG0380014668.01.T01:CDS |
| TGCTGATGTGGCGGTGGTCA+CGG | 0.396494 | 3:-58188607 | MsG0380014668.01.T01:CDS |
| GACATGAAGCGGTGACCCTT+TGG | 0.409014 | 3:+58188946 | None:intergenic |
| TTAGTCCTGGATTTAAGCTT+GGG | 0.409214 | 3:-58187046 | MsG0380014668.01.T01:CDS |
| TTCATTGTAAAACTCACTCC+TGG | 0.421633 | 3:+58187244 | None:intergenic |
| ATAGTTGTTTCAAATAGTTC+TGG | 0.422574 | 3:+58187733 | None:intergenic |
| AGAACTATTTGAAACAACTA+TGG | 0.426963 | 3:-58187731 | MsG0380014668.01.T01:CDS |
| TGCCAGCTGGTCAGGTTGTA+GGG | 0.430750 | 3:-58187076 | MsG0380014668.01.T01:CDS |
| GACGAAGATGAGGATGAAAA+TGG | 0.435909 | 3:-58188810 | MsG0380014668.01.T01:CDS |
| AGAGAGAGGTTTCGGAGGAA+TGG | 0.437415 | 3:-58188561 | MsG0380014668.01.T01:CDS |
| AAGATGGAAGAGTCATTGTT+TGG | 0.439718 | 3:-58187308 | MsG0380014668.01.T01:CDS |
| ATGGATCTGTTATAAAATCC+AGG | 0.440196 | 3:-58187022 | MsG0380014668.01.T01:CDS |
| AAGAGAAAACTAGGAATTCA+AGG | 0.442283 | 3:-58188330 | MsG0380014668.01.T01:intron |
| GTAGGGTTTCCAGTTAGTCC+TGG | 0.454644 | 3:-58187059 | MsG0380014668.01.T01:CDS |
| GGATGAAAATGGTGACCCTT+TGG | 0.456233 | 3:-58188799 | MsG0380014668.01.T01:CDS |
| TCTAATGCACAATGCACATT+GGG | 0.456485 | 3:-58187662 | MsG0380014668.01.T01:CDS |
| TAGGGTTGGCCAAAACTGTA+TGG | 0.457586 | 3:-58187217 | MsG0380014668.01.T01:CDS |
| GTTAGTCCTGGATTTAAGCT+TGG | 0.463063 | 3:-58187047 | MsG0380014668.01.T01:CDS |
| GCCTCAAATTGACTTGGTGG+AGG | 0.466137 | 3:+58187164 | None:intergenic |
| CCTCAAATTGACTTGGTGGA+GGG | 0.471972 | 3:+58187165 | None:intergenic |
| CTCTTAGATTGAGACCTCCC+AGG | 0.476445 | 3:+58188348 | None:intergenic |
| TGCCATTGTTCATCCAAAGA+TGG | 0.479244 | 3:-58187324 | MsG0380014668.01.T01:CDS |
| GGTTAAGGATTTAGAAGTGA+AGG | 0.480570 | 3:-58188433 | MsG0380014668.01.T01:CDS |
| CGACTTGCCTCAAATTGACT+TGG | 0.486173 | 3:+58187158 | None:intergenic |
| AACCCTACAACCTGACCAGC+TGG | 0.487016 | 3:+58187074 | None:intergenic |
| AGGAATGGTGGTGGTAGGAA+AGG | 0.489638 | 3:-58188546 | MsG0380014668.01.T01:CDS |
| GGTCACGGAGCTGAGGAAGC+TGG | 0.493225 | 3:-58188592 | MsG0380014668.01.T01:CDS |
| GATTTGAAAGAGAAGCTTGA+AGG | 0.493676 | 3:-58188411 | MsG0380014668.01.T01:CDS |
| CCTGGATTTAAGCTTGGGAA+TGG | 0.494040 | 3:-58187041 | MsG0380014668.01.T01:CDS |
| GGTAGTGGTGAAAAGAAACC+TGG | 0.495329 | 3:-58188366 | MsG0380014668.01.T01:CDS |
| CCCTCCACCAAGTCAATTTG+AGG | 0.496125 | 3:-58187165 | MsG0380014668.01.T01:CDS |
| TCCAAGCAGGAAACCACCCC+AGG | 0.499560 | 3:-58187262 | MsG0380014668.01.T01:CDS |
| ACCAGCTGGCACCCGCCCAC+CGG | 0.500037 | 3:+58187088 | None:intergenic |
| CACTATCCATATACTGTGGA+TGG | 0.500777 | 3:+58187123 | None:intergenic |
| TCTCAATCTAAGAGAAAACT+AGG | 0.501214 | 3:-58188339 | MsG0380014668.01.T01:CDS |
| AGCTGGCTGTGTTGAGAGAG+AGG | 0.505406 | 3:-58188575 | MsG0380014668.01.T01:CDS |
| ATTCAACGAAGACAAAATGA+TGG | 0.510894 | 3:-58188763 | MsG0380014668.01.T01:CDS |
| GAGAGGTTTCGGAGGAATGG+TGG | 0.511830 | 3:-58188558 | MsG0380014668.01.T01:CDS |
| AGGAAAGGTGGTCGGAGAAG+AGG | 0.512189 | 3:-58188531 | MsG0380014668.01.T01:CDS |
| TCTTCAATTATCTTCCTCAC+TGG | 0.514432 | 3:+58188906 | None:intergenic |
| AAAATCCCAAGAAGCTCAGC+AGG | 0.514756 | 3:+58187389 | None:intergenic |
| AGTTATACTGAACGAGTCAC+TGG | 0.518504 | 3:-58189100 | MsG0380014668.01.T01:five_prime_UTR |
| ACAAGAAGCACATTCACCTT+GGG | 0.521549 | 3:-58188649 | MsG0380014668.01.T01:CDS |
| TACTGAACGAGTCACTGGTT+TGG | 0.521795 | 3:-58189095 | MsG0380014668.01.T01:five_prime_UTR |
| CTCTAATGCACAATGCACAT+TGG | 0.523721 | 3:-58187663 | MsG0380014668.01.T01:CDS |
| TACAAGAAGCACATTCACCT+TGG | 0.524354 | 3:-58188650 | MsG0380014668.01.T01:CDS |
| GCCGTATGAAGCAGTGGTGG+AGG | 0.527747 | 3:-58188475 | MsG0380014668.01.T01:CDS |
| AATGGTGGTGGTAGGAAAGG+TGG | 0.530582 | 3:-58188543 | MsG0380014668.01.T01:CDS |
| AAGAAGCTCAGCAGGATCCA+TGG | 0.530759 | 3:+58187397 | None:intergenic |
| GTTTCAAATAGTTCTGGTGT+AGG | 0.534867 | 3:+58187739 | None:intergenic |
| CTTGCCTCAAATTGACTTGG+TGG | 0.539358 | 3:+58187161 | None:intergenic |
| GGCGTCGGTGAGGGAGGTTG+TGG | 0.540946 | 3:-58188499 | MsG0380014668.01.T01:CDS |
| AATGGAAGAAATCTTCGAAA+CGG | 0.543142 | 3:-58188703 | MsG0380014668.01.T01:CDS |
| AACTCAACCAATGACGAGAA+AGG | 0.543640 | 3:-58188991 | MsG0380014668.01.T01:exon |
| ATCTTCCTCACTGGAACAAG+AGG | 0.544878 | 3:+58188915 | None:intergenic |
| GCTCTTTCTAATAATGGTAG+TGG | 0.548165 | 3:-58188381 | MsG0380014668.01.T01:CDS |
| CTCATCTTCTCTGCATCCCA+AGG | 0.549218 | 3:+58188633 | None:intergenic |
| TCATTGTAAAACTCACTCCT+GGG | 0.554453 | 3:+58187245 | None:intergenic |
| ATACAAGGATATGAAGTCCA+TGG | 0.554965 | 3:-58187414 | MsG0380014668.01.T01:CDS |
| GGAGTTGAAGAATGAAGTGA+AGG | 0.558888 | 3:-58188454 | MsG0380014668.01.T01:CDS |
| TGGTGTGGCGTCGGTGAGGG+AGG | 0.559820 | 3:-58188505 | MsG0380014668.01.T01:CDS |
| CAGCATGGTCAAGTCCAAGC+AGG | 0.567964 | 3:-58187275 | MsG0380014668.01.T01:CDS |
| CCATTCCCAAGCTTAAATCC+AGG | 0.570658 | 3:+58187041 | None:intergenic |
| TCCTCCACCACTGCTTCATA+CGG | 0.572088 | 3:+58188474 | None:intergenic |
| AGATAAAAGCATAGATGTGA+AGG | 0.572469 | 3:+58187684 | None:intergenic |
| ATTTCTCCGATCTGATCCAA+AGG | 0.573461 | 3:-58188962 | MsG0380014668.01.T01:CDS |
| TTCGGAGGAATGGTGGTGGT+AGG | 0.576057 | 3:-58188551 | MsG0380014668.01.T01:CDS |
| AGAAGAAGAAGAAACTGAGT+GGG | 0.576145 | 3:+58189071 | None:intergenic |
| AAGAAGAAGAAGAAACTGAG+TGG | 0.576296 | 3:+58189070 | None:intergenic |
| GAAGATGAGGGTTGCTGATG+TGG | 0.577480 | 3:-58188619 | MsG0380014668.01.T01:CDS |
| AGGTTTCGGAGGAATGGTGG+TGG | 0.578118 | 3:-58188555 | MsG0380014668.01.T01:CDS |
| CTTGGGATGCAGAGAAGATG+AGG | 0.580380 | 3:-58188632 | MsG0380014668.01.T01:CDS |
| TGTATTGAGTGAAGCAATCA+CGG | 0.580907 | 3:+58187432 | None:intergenic |
| TTCCATCTTTGGATGAACAA+TGG | 0.584376 | 3:+58187322 | None:intergenic |
| TGGCGGTGGTCACGGAGCTG+AGG | 0.584900 | 3:-58188599 | MsG0380014668.01.T01:CDS |
| TTTCTCCGATCTGATCCAAA+GGG | 0.592192 | 3:-58188961 | MsG0380014668.01.T01:CDS |
| GAGGGTTGCTGATGTGGCGG+TGG | 0.598640 | 3:-58188613 | MsG0380014668.01.T01:CDS |
| TTCAACGAAGACAAAATGAT+GGG | 0.602829 | 3:-58188762 | MsG0380014668.01.T01:CDS |
| AGTCAATTTGAGGCAAGTCG+TGG | 0.609506 | 3:-58187155 | MsG0380014668.01.T01:CDS |
| TCTGGCTATCAAATATACCC+TGG | 0.612671 | 3:+58187004 | None:intergenic |
| TGTAAAACTCACTCCTGGGG+TGG | 0.613108 | 3:+58187249 | None:intergenic |
| TGATTGCTTCACTCAATACA+AGG | 0.613182 | 3:-58187429 | MsG0380014668.01.T01:CDS |
| GTGGTGGTAGGAAAGGTGGT+CGG | 0.614967 | 3:-58188539 | MsG0380014668.01.T01:CDS |
| TTTGGTAACTTAGAGCAGCA+TGG | 0.620962 | 3:-58187290 | MsG0380014668.01.T01:CDS |
| TGGATCTGTTATAAAATCCA+GGG | 0.625379 | 3:-58187021 | MsG0380014668.01.T01:CDS |
| TCCACAGTATATGGATAGTG+TGG | 0.626365 | 3:-58187120 | MsG0380014668.01.T01:CDS |
| TCACTGGAACAAGAGGGTTG+AGG | 0.634899 | 3:+58188922 | None:intergenic |
| TCTTCCTCACTGGAACAAGA+GGG | 0.645581 | 3:+58188916 | None:intergenic |
| TGTGGCGCCGTATGAAGCAG+TGG | 0.652115 | 3:-58188481 | MsG0380014668.01.T01:CDS |
| GGTGACCCTTTGGATCAGAT+CGG | 0.655253 | 3:+58188956 | None:intergenic |
| GGCGCCGTATGAAGCAGTGG+TGG | 0.660336 | 3:-58188478 | MsG0380014668.01.T01:CDS |
| TGTTGAGAGAGAGGTTTCGG+AGG | 0.661905 | 3:-58188566 | MsG0380014668.01.T01:CDS |
| TTGGGATGCAGAGAAGATGA+GGG | 0.665740 | 3:-58188631 | MsG0380014668.01.T01:CDS |
| TCTTTGGATGAACAATGGCA+AGG | 0.673047 | 3:+58187327 | None:intergenic |
| TGTTGATGATGACGAAGATG+AGG | 0.673325 | 3:-58188820 | MsG0380014668.01.T01:CDS |
| ACCACACTATCCATATACTG+TGG | 0.681895 | 3:+58187119 | None:intergenic |
| AGGGTTGAGGAGACATGAAG+CGG | 0.682169 | 3:+58188935 | None:intergenic |
| CATTGTAAAACTCACTCCTG+GGG | 0.682589 | 3:+58187246 | None:intergenic |
| TCAACCCTCTTGTTCCAGTG+AGG | 0.686846 | 3:-58188920 | MsG0380014668.01.T01:CDS |
| GATGAGGGTTGCTGATGTGG+CGG | 0.695122 | 3:-58188616 | MsG0380014668.01.T01:CDS |
| GTAGTGGTGAAAAGAAACCT+GGG | 0.699313 | 3:-58188365 | MsG0380014668.01.T01:CDS |
| TACGAATCAGAAGAAAACAG+AGG | 0.738462 | 3:-58188873 | MsG0380014668.01.T01:CDS |
| GTGGTGAAAAGAAACCTGGG+AGG | 0.793187 | 3:-58188362 | MsG0380014668.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTAAAAAACAAAAACAA+AGG | + | Chr3:58187806-58187825 | None:intergenic | 15.0% |
| !!! | AGTTTTACAATGAATTTTTA+GGG | - | Chr3:58188860-58188879 | MsG0380014668.01.T01:CDS | 15.0% |
| !!! | TTTTGGAATATAACTTAAAA+GGG | - | Chr3:58188202-58188221 | MsG0380014668.01.T01:intron | 15.0% |
| !!! | TTTTGGAATATAATTCTAAA+GGG | - | Chr3:58188018-58188037 | MsG0380014668.01.T01:intron | 15.0% |
| !! | TAATCCAAAAGTTACTTATT+TGG | - | Chr3:58188061-58188080 | MsG0380014668.01.T01:intron | 20.0% |
| !!! | AAAGTTACTTATTTGGAATT+TGG | - | Chr3:58188068-58188087 | MsG0380014668.01.T01:intron | 20.0% |
| !!! | AATTCCAAATAAGTAACTTT+TGG | + | Chr3:58188068-58188087 | None:intergenic | 20.0% |
| !!! | CTTTTGGAATATAACTTAAA+AGG | - | Chr3:58188201-58188220 | MsG0380014668.01.T01:intron | 20.0% |
| !!! | CTTTTGGAATATAATTCTAA+AGG | - | Chr3:58188017-58188036 | MsG0380014668.01.T01:intron | 20.0% |
| !!! | GAGTTTTACAATGAATTTTT+AGG | - | Chr3:58188859-58188878 | MsG0380014668.01.T01:CDS | 20.0% |
| !!! | TTTGGAATATAACTTAAAAG+GGG | - | Chr3:58188203-58188222 | MsG0380014668.01.T01:intron | 20.0% |
| ! | CTTCAAGAAACTATTAACTT+TGG | + | Chr3:58188254-58188273 | None:intergenic | 25.0% |
| !! | AAAGATTTTCCTCGATATAT+AGG | + | Chr3:58188573-58188592 | None:intergenic | 25.0% |
| !! | AGAACTATTTGAAACAACTA+TGG | - | Chr3:58188364-58188383 | MsG0380014668.01.T01:CDS | 25.0% |
| !! | ATAGTTGTTTCAAATAGTTC+TGG | + | Chr3:58188365-58188384 | None:intergenic | 25.0% |
| !! | TCACAAAGTTTCTTTTTGTT+TGG | - | Chr3:58187912-58187931 | MsG0380014668.01.T01:intron | 25.0% |
| !! | TGTGTTTCATGTTTAGAATT+TGG | - | Chr3:58187846-58187865 | MsG0380014668.01.T01:intron | 25.0% |
| !!! | AATTTTGAAGGTAAAGCAAA+TGG | - | Chr3:58187362-58187381 | MsG0380014668.01.T01:CDS | 25.0% |
| !!! | TTACAATGAATTTTTAGGGT+TGG | - | Chr3:58188864-58188883 | MsG0380014668.01.T01:CDS | 25.0% |
| AAGAGAAAACTAGGAATTCA+AGG | - | Chr3:58187765-58187784 | MsG0380014668.01.T01:intron | 30.0% | |
| AATGGAAGAAATCTTCGAAA+CGG | - | Chr3:58187392-58187411 | MsG0380014668.01.T01:CDS | 30.0% | |
| ATATCGAGGAAAATCTTTCA+AGG | - | Chr3:58188575-58188594 | MsG0380014668.01.T01:CDS | 30.0% | |
| ATGGATCTGTTATAAAATCC+AGG | - | Chr3:58189073-58189092 | MsG0380014668.01.T01:five_prime_UTR | 30.0% | |
| ATTCAACGAAGACAAAATGA+TGG | - | Chr3:58187332-58187351 | MsG0380014668.01.T01:CDS | 30.0% | |
| CATGAAACTTTCTATATGGA+TGG | - | Chr3:58188605-58188624 | MsG0380014668.01.T01:CDS | 30.0% | |
| CGATCATGAAACTTTCTATA+TGG | - | Chr3:58188601-58188620 | MsG0380014668.01.T01:CDS | 30.0% | |
| CTTGAAGATGAAATGAATTG+AGG | - | Chr3:58188267-58188286 | MsG0380014668.01.T01:intron | 30.0% | |
| GTTGTTGCTCTTTCTAATAA+TGG | - | Chr3:58187708-58187727 | MsG0380014668.01.T01:CDS | 30.0% | |
| TATCGAGGAAAATCTTTCAA+GGG | - | Chr3:58188576-58188595 | MsG0380014668.01.T01:CDS | 30.0% | |
| TCTCAATCTAAGAGAAAACT+AGG | - | Chr3:58187756-58187775 | MsG0380014668.01.T01:CDS | 30.0% | |
| TGGATCTGTTATAAAATCCA+GGG | - | Chr3:58189074-58189093 | MsG0380014668.01.T01:five_prime_UTR | 30.0% | |
| TTCAACGAAGACAAAATGAT+GGG | - | Chr3:58187333-58187352 | MsG0380014668.01.T01:CDS | 30.0% | |
| ! | AATTTTCCAAAGTGACATGT+TGG | + | Chr3:58188733-58188752 | None:intergenic | 30.0% |
| ! | AGATAAAAGCATAGATGTGA+AGG | + | Chr3:58188414-58188433 | None:intergenic | 30.0% |
| ! | GATGGGTATGAAAATTTTGA+AGG | - | Chr3:58187350-58187369 | MsG0380014668.01.T01:CDS | 30.0% |
| !! | AAAGCAAATGGAAGCATTAA+TGG | - | Chr3:58187374-58187393 | MsG0380014668.01.T01:CDS | 30.0% |
| !! | AATTCGTCATTTTCTTCCAA+AGG | + | Chr3:58187315-58187334 | None:intergenic | 30.0% |
| !! | ATTCGTCATTTTCTTCCAAA+GGG | + | Chr3:58187314-58187333 | None:intergenic | 30.0% |
| !! | ATTTTACCAACATGTCACTT+TGG | - | Chr3:58188724-58188743 | MsG0380014668.01.T01:CDS | 30.0% |
| !! | TGCGTATTTGATTTTGCTTT+TGG | - | Chr3:58188001-58188020 | MsG0380014668.01.T01:intron | 30.0% |
| !! | TGTTTTCTTCTGATTCGTAA+GGG | + | Chr3:58187221-58187240 | None:intergenic | 30.0% |
| !!! | TTCAGAGTGATTTTAGCTTT+TGG | - | Chr3:58188185-58188204 | MsG0380014668.01.T01:intron | 30.0% |
| AACAATGACTCTTCCATCTT+TGG | + | Chr3:58188787-58188806 | None:intergenic | 35.0% | |
| AAGAAGAAGAAGAAACTGAG+TGG | + | Chr3:58187028-58187047 | None:intergenic | 35.0% | |
| AAGATGGAAGAGTCATTGTT+TGG | - | Chr3:58188787-58188806 | MsG0380014668.01.T01:CDS | 35.0% | |
| AATCAAGTGCATACTTAGCA+TGG | + | Chr3:58188550-58188569 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAACTGAGT+GGG | + | Chr3:58187027-58187046 | None:intergenic | 35.0% | |
| ATACAAGGATATGAAGTCCA+TGG | - | Chr3:58188681-58188700 | MsG0380014668.01.T01:CDS | 35.0% | |
| CACTTGATTCCTATATATCG+AGG | - | Chr3:58188561-58188580 | MsG0380014668.01.T01:CDS | 35.0% | |
| GAAGAATGAAGTGAAGGTTA+AGG | - | Chr3:58187647-58187666 | MsG0380014668.01.T01:CDS | 35.0% | |
| GATTTGAAAGAGAAGCTTGA+AGG | - | Chr3:58187684-58187703 | MsG0380014668.01.T01:CDS | 35.0% | |
| GCTCTTTCTAATAATGGTAG+TGG | - | Chr3:58187714-58187733 | MsG0380014668.01.T01:CDS | 35.0% | |
| GGTTAAGGATTTAGAAGTGA+AGG | - | Chr3:58187662-58187681 | MsG0380014668.01.T01:CDS | 35.0% | |
| TACGAATCAGAAGAAAACAG+AGG | - | Chr3:58187222-58187241 | MsG0380014668.01.T01:CDS | 35.0% | |
| TCATTGTAAAACTCACTCCT+GGG | + | Chr3:58188853-58188872 | None:intergenic | 35.0% | |
| TCTAATGCACAATGCACATT+GGG | - | Chr3:58188433-58188452 | MsG0380014668.01.T01:CDS | 35.0% | |
| TCTTCAATTATCTTCCTCAC+TGG | + | Chr3:58187192-58187211 | None:intergenic | 35.0% | |
| TGATTGCTTCACTCAATACA+AGG | - | Chr3:58188666-58188685 | MsG0380014668.01.T01:CDS | 35.0% | |
| TGTATTGAGTGAAGCAATCA+CGG | + | Chr3:58188666-58188685 | None:intergenic | 35.0% | |
| TTAGTCCTGGATTTAAGCTT+GGG | - | Chr3:58189049-58189068 | MsG0380014668.01.T01:five_prime_UTR | 35.0% | |
| TTCATTGTAAAACTCACTCC+TGG | + | Chr3:58188854-58188873 | None:intergenic | 35.0% | |
| TTCCATCTTTGGATGAACAA+TGG | + | Chr3:58188776-58188795 | None:intergenic | 35.0% | |
| ! | ATGAAGCAACCATACAGTTT+TGG | + | Chr3:58188890-58188909 | None:intergenic | 35.0% |
| ! | GATAGTGTGGTGAAATTTTC+CGG | - | Chr3:58188988-58189007 | MsG0380014668.01.T01:exon | 35.0% |
| ! | TTTGAAACCTTTCTCGTCAT+TGG | + | Chr3:58187114-58187133 | None:intergenic | 35.0% |
| !! | CTGTTTTCTTCTGATTCGTA+AGG | + | Chr3:58187222-58187241 | None:intergenic | 35.0% |
| !! | GTTTCAAATAGTTCTGGTGT+AGG | + | Chr3:58188359-58188378 | None:intergenic | 35.0% |
| !! | GTTTTCTTCTGATTCGTAAG+GGG | + | Chr3:58187220-58187239 | None:intergenic | 35.0% |
| AACTCAACCAATGACGAGAA+AGG | - | Chr3:58187104-58187123 | MsG0380014668.01.T01:CDS | 40.0% | |
| ACCACACTATCCATATACTG+TGG | + | Chr3:58188979-58188998 | None:intergenic | 40.0% | |
| AGCTTAAATCCAGGACTAAC+TGG | + | Chr3:58189048-58189067 | None:intergenic | 40.0% | |
| ATTTCTCCGATCTGATCCAA+AGG | - | Chr3:58187133-58187152 | MsG0380014668.01.T01:CDS | 40.0% | |
| CACTATCCATATACTGTGGA+TGG | + | Chr3:58188975-58188994 | None:intergenic | 40.0% | |
| CATTGTAAAACTCACTCCTG+GGG | + | Chr3:58188852-58188871 | None:intergenic | 40.0% | |
| CTCTAATGCACAATGCACAT+TGG | - | Chr3:58188432-58188451 | MsG0380014668.01.T01:CDS | 40.0% | |
| GACGAAGATGAGGATGAAAA+TGG | - | Chr3:58187285-58187304 | MsG0380014668.01.T01:CDS | 40.0% | |
| GGAGTTGAAGAATGAAGTGA+AGG | - | Chr3:58187641-58187660 | MsG0380014668.01.T01:CDS | 40.0% | |
| GGGTTTCAGATTCTACTTGA+AGG | - | Chr3:58188038-58188057 | MsG0380014668.01.T01:intron | 40.0% | |
| GTAGTGGTGAAAAGAAACCT+GGG | - | Chr3:58187730-58187749 | MsG0380014668.01.T01:CDS | 40.0% | |
| GTTAGTCCTGGATTTAAGCT+TGG | - | Chr3:58189048-58189067 | MsG0380014668.01.T01:five_prime_UTR | 40.0% | |
| TCCACAGTATATGGATAGTG+TGG | - | Chr3:58188975-58188994 | MsG0380014668.01.T01:CDS | 40.0% | |
| TCTGGCTATCAAATATACCC+TGG | + | Chr3:58189094-58189113 | None:intergenic | 40.0% | |
| TCTTTGGATGAACAATGGCA+AGG | + | Chr3:58188771-58188790 | None:intergenic | 40.0% | |
| TGAGTTCCATCCACAGTATA+TGG | - | Chr3:58188966-58188985 | MsG0380014668.01.T01:CDS | 40.0% | |
| TGCCATTGTTCATCCAAAGA+TGG | - | Chr3:58188771-58188790 | MsG0380014668.01.T01:CDS | 40.0% | |
| TTTCTCCGATCTGATCCAAA+GGG | - | Chr3:58187134-58187153 | MsG0380014668.01.T01:CDS | 40.0% | |
| ! | ACAAGAAGCACATTCACCTT+GGG | - | Chr3:58187446-58187465 | MsG0380014668.01.T01:intron | 40.0% |
| ! | TACAAGAAGCACATTCACCT+TGG | - | Chr3:58187445-58187464 | MsG0380014668.01.T01:intron | 40.0% |
| ! | TTTGGTAACTTAGAGCAGCA+TGG | - | Chr3:58188805-58188824 | MsG0380014668.01.T01:CDS | 40.0% |
| !! | TGTTGATGATGACGAAGATG+AGG | - | Chr3:58187275-58187294 | MsG0380014668.01.T01:CDS | 40.0% |
| AAAATCCCAAGAAGCTCAGC+AGG | + | Chr3:58188709-58188728 | None:intergenic | 45.0% | |
| AGCATGGTGAGATGAGACAA+TGG | + | Chr3:58188534-58188553 | None:intergenic | 45.0% | |
| ATCTTCCTCACTGGAACAAG+AGG | + | Chr3:58187183-58187202 | None:intergenic | 45.0% | |
| CCATTCCCAAGCTTAAATCC+AGG | + | Chr3:58189057-58189076 | None:intergenic | 45.0% | |
| CCTGGATTTAAGCTTGGGAA+TGG | - | Chr3:58189054-58189073 | MsG0380014668.01.T01:five_prime_UTR | 45.0% | |
| CGACTTGCCTCAAATTGACT+TGG | + | Chr3:58188940-58188959 | None:intergenic | 45.0% | |
| CTGTGTTGAGAGAGAGGTTT+CGG | - | Chr3:58187526-58187545 | MsG0380014668.01.T01:intron | 45.0% | |
| GAAACTGATCAGGATTGAGG+AGG | + | Chr3:58188642-58188661 | None:intergenic | 45.0% | |
| GGATGAAAATGGTGACCCTT+TGG | - | Chr3:58187296-58187315 | MsG0380014668.01.T01:CDS | 45.0% | |
| TCTTCCTCACTGGAACAAGA+GGG | + | Chr3:58187182-58187201 | None:intergenic | 45.0% | |
| TTGGGATGCAGAGAAGATGA+GGG | - | Chr3:58187464-58187483 | MsG0380014668.01.T01:intron | 45.0% | |
| ! | AGTCAATTTGAGGCAAGTCG+TGG | - | Chr3:58188940-58188959 | MsG0380014668.01.T01:CDS | 45.0% |
| ! | AGTGTGGTGAAATTTTCCGG+TGG | - | Chr3:58188991-58189010 | MsG0380014668.01.T01:exon | 45.0% |
| ! | GGTAGTGGTGAAAAGAAACC+TGG | - | Chr3:58187729-58187748 | MsG0380014668.01.T01:CDS | 45.0% |
| ! | GTGTGGTGAAATTTTCCGGT+GGG | - | Chr3:58188992-58189011 | MsG0380014668.01.T01:exon | 45.0% |
| ! | TACTGAACGAGTCACTGGTT+TGG | - | Chr3:58187000-58187019 | MsG0380014668.01.T01:CDS | 45.0% |
| !! | CCTCAAATTGACTTGGTGGA+GGG | + | Chr3:58188933-58188952 | None:intergenic | 45.0% |
| !! | CTTGCCTCAAATTGACTTGG+TGG | + | Chr3:58188937-58188956 | None:intergenic | 45.0% |
| !! | TAGGGTTGGCCAAAACTGTA+TGG | - | Chr3:58188878-58188897 | MsG0380014668.01.T01:CDS | 45.0% |
| AAGAAGCTCAGCAGGATCCA+TGG | + | Chr3:58188701-58188720 | None:intergenic | 50.0% | |
| AGAGAGAGGTTTCGGAGGAA+TGG | - | Chr3:58187534-58187553 | MsG0380014668.01.T01:intron | 50.0% | |
| AGGGTTGAGGAGACATGAAG+CGG | + | Chr3:58187163-58187182 | None:intergenic | 50.0% | |
| ATGGATCCTGCTGAGCTTCT+TGG | - | Chr3:58188700-58188719 | MsG0380014668.01.T01:CDS | 50.0% | |
| CAATCACGGCGAAACTGATC+AGG | + | Chr3:58188652-58188671 | None:intergenic | 50.0% | |
| CCCTCCACCAAGTCAATTTG+AGG | - | Chr3:58188930-58188949 | MsG0380014668.01.T01:CDS | 50.0% | |
| CTCATCTTCTCTGCATCCCA+AGG | + | Chr3:58187465-58187484 | None:intergenic | 50.0% | |
| CTCTTAGATTGAGACCTCCC+AGG | + | Chr3:58187750-58187769 | None:intergenic | 50.0% | |
| CTTGGGATGCAGAGAAGATG+AGG | - | Chr3:58187463-58187482 | MsG0380014668.01.T01:intron | 50.0% | |
| GAAGATGAGGGTTGCTGATG+TGG | - | Chr3:58187476-58187495 | MsG0380014668.01.T01:intron | 50.0% | |
| GGCGAAACTGATCAGGATTG+AGG | + | Chr3:58188645-58188664 | None:intergenic | 50.0% | |
| GGTGACCCTTTGGATCAGAT+CGG | + | Chr3:58187142-58187161 | None:intergenic | 50.0% | |
| GTAGGGTTTCCAGTTAGTCC+TGG | - | Chr3:58189036-58189055 | MsG0380014668.01.T01:five_prime_UTR | 50.0% | |
| GTGGTGAAAAGAAACCTGGG+AGG | - | Chr3:58187733-58187752 | MsG0380014668.01.T01:CDS | 50.0% | |
| TCAACCCTCTTGTTCCAGTG+AGG | - | Chr3:58187175-58187194 | MsG0380014668.01.T01:CDS | 50.0% | |
| TCACTGGAACAAGAGGGTTG+AGG | + | Chr3:58187176-58187195 | None:intergenic | 50.0% | |
| TCAGGATTGAGGAGGATGAG+AGG | + | Chr3:58188634-58188653 | None:intergenic | 50.0% | |
| TCCTCCACCACTGCTTCATA+CGG | + | Chr3:58187624-58187643 | None:intergenic | 50.0% | |
| TGGATCCTGCTGAGCTTCTT+GGG | - | Chr3:58188701-58188720 | MsG0380014668.01.T01:CDS | 50.0% | |
| TGTAAAACTCACTCCTGGGG+TGG | + | Chr3:58188849-58188868 | None:intergenic | 50.0% | |
| TGTTGAGAGAGAGGTTTCGG+AGG | - | Chr3:58187529-58187548 | MsG0380014668.01.T01:intron | 50.0% | |
| ! | TGGTGAAATTTTCCGGTGGG+CGG | - | Chr3:58188995-58189014 | MsG0380014668.01.T01:exon | 50.0% |
| !! | AAGAGGTTTTGGTGTGGCGT+CGG | - | Chr3:58187581-58187600 | MsG0380014668.01.T01:intron | 50.0% |
| !! | AATGGTGGTGGTAGGAAAGG+TGG | - | Chr3:58187552-58187571 | MsG0380014668.01.T01:intron | 50.0% |
| !! | AGGAATGGTGGTGGTAGGAA+AGG | - | Chr3:58187549-58187568 | MsG0380014668.01.T01:intron | 50.0% |
| !! | GCCTCAAATTGACTTGGTGG+AGG | + | Chr3:58188934-58188953 | None:intergenic | 50.0% |
| !! | TCGGAGAAGAGGTTTTGGTG+TGG | - | Chr3:58187575-58187594 | MsG0380014668.01.T01:intron | 50.0% |
| AACCCTACAACCTGACCAGC+TGG | + | Chr3:58189024-58189043 | None:intergenic | 55.0% | |
| AGCTGGCTGTGTTGAGAGAG+AGG | - | Chr3:58187520-58187539 | MsG0380014668.01.T01:intron | 55.0% | |
| AGGAAAGGTGGTCGGAGAAG+AGG | - | Chr3:58187564-58187583 | MsG0380014668.01.T01:intron | 55.0% | |
| AGGTTTCGGAGGAATGGTGG+TGG | - | Chr3:58187540-58187559 | MsG0380014668.01.T01:intron | 55.0% | |
| CAGCATGGTCAAGTCCAAGC+AGG | - | Chr3:58188820-58188839 | MsG0380014668.01.T01:CDS | 55.0% | |
| GACATGAAGCGGTGACCCTT+TGG | + | Chr3:58187152-58187171 | None:intergenic | 55.0% | |
| GAGAGGTTTCGGAGGAATGG+TGG | - | Chr3:58187537-58187556 | MsG0380014668.01.T01:intron | 55.0% | |
| GATGAGGGTTGCTGATGTGG+CGG | - | Chr3:58187479-58187498 | MsG0380014668.01.T01:intron | 55.0% | |
| GTGGTGGTAGGAAAGGTGGT+CGG | - | Chr3:58187556-58187575 | MsG0380014668.01.T01:intron | 55.0% | |
| ! | GGTGAAATTTTCCGGTGGGC+GGG | - | Chr3:58188996-58189015 | MsG0380014668.01.T01:exon | 55.0% |
| ! | GGTGGTCGGAGAAGAGGTTT+TGG | - | Chr3:58187570-58187589 | MsG0380014668.01.T01:intron | 55.0% |
| ! | TGCCAGCTGGTCAGGTTGTA+GGG | - | Chr3:58189019-58189038 | MsG0380014668.01.T01:five_prime_UTR | 55.0% |
| !! | TTCGGAGGAATGGTGGTGGT+AGG | - | Chr3:58187544-58187563 | MsG0380014668.01.T01:intron | 55.0% |
| !!! | TTTTGGTGTGGCGTCGGTGA+GGG | - | Chr3:58187587-58187606 | MsG0380014668.01.T01:intron | 55.0% |
| GCCGTATGAAGCAGTGGTGG+AGG | - | Chr3:58187620-58187639 | MsG0380014668.01.T01:CDS | 60.0% | |
| TCCAAGCAGGAAACCACCCC+AGG | - | Chr3:58188833-58188852 | MsG0380014668.01.T01:CDS | 60.0% | |
| TCCTGGGGTGGTTTCCTGCT+TGG | + | Chr3:58188837-58188856 | None:intergenic | 60.0% | |
| TGCTGATGTGGCGGTGGTCA+CGG | - | Chr3:58187488-58187507 | MsG0380014668.01.T01:intron | 60.0% | |
| TGTGGCGCCGTATGAAGCAG+TGG | - | Chr3:58187614-58187633 | MsG0380014668.01.T01:CDS | 60.0% | |
| ! | GTGCCAGCTGGTCAGGTTGT+AGG | - | Chr3:58189018-58189037 | MsG0380014668.01.T01:five_prime_UTR | 60.0% |
| !!! | GTTTTGGTGTGGCGTCGGTG+AGG | - | Chr3:58187586-58187605 | MsG0380014668.01.T01:intron | 60.0% |
| GAGGGTTGCTGATGTGGCGG+TGG | - | Chr3:58187482-58187501 | MsG0380014668.01.T01:intron | 65.0% | |
| GGCGCCGTATGAAGCAGTGG+TGG | - | Chr3:58187617-58187636 | MsG0380014668.01.T01:CDS | 65.0% | |
| GGTCACGGAGCTGAGGAAGC+TGG | - | Chr3:58187503-58187522 | MsG0380014668.01.T01:intron | 65.0% | |
| TGGCGGTGGTCACGGAGCTG+AGG | - | Chr3:58187496-58187515 | MsG0380014668.01.T01:intron | 70.0% | |
| !! | GGCGTCGGTGAGGGAGGTTG+TGG | - | Chr3:58187596-58187615 | MsG0380014668.01.T01:intron | 70.0% |
| !! | TGGTGTGGCGTCGGTGAGGG+AGG | - | Chr3:58187590-58187609 | MsG0380014668.01.T01:intron | 70.0% |
| ACCAGCTGGCACCCGCCCAC+CGG | + | Chr3:58189010-58189029 | None:intergenic | 75.0% | |
| TGGGCGGGTGCCAGCTGGTC+AGG | - | Chr3:58189011-58189030 | MsG0380014668.01.T01:five_prime_UTR | 75.0% | |
| ! | TCCGGTGGGCGGGTGCCAGC+TGG | - | Chr3:58189006-58189025 | MsG0380014668.01.T01:five_prime_UTR | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 58186998 | 58189119 | 58186998 | ID=MsG0380014668.01;Name=MsG0380014668.01 |
| Chr3 | mRNA | 58186998 | 58189119 | 58186998 | ID=MsG0380014668.01.T01;Parent=MsG0380014668.01;Name=MsG0380014668.01.T01;_AED=0.26;_eAED=0.26;_QI=116|0.5|0.33|1|1|1|3|0|436 |
| Chr3 | exon | 58186998 | 58187459 | 58186998 | ID=MsG0380014668.01.T01:exon:18840;Parent=MsG0380014668.01.T01 |
| Chr3 | exon | 58187600 | 58187775 | 58187600 | ID=MsG0380014668.01.T01:exon:18839;Parent=MsG0380014668.01.T01 |
| Chr3 | exon | 58188331 | 58189119 | 58188331 | ID=MsG0380014668.01.T01:exon:18838;Parent=MsG0380014668.01.T01 |
| Chr3 | five_prime_UTR | 58189004 | 58189119 | 58189004 | ID=MsG0380014668.01.T01:five_prime_utr;Parent=MsG0380014668.01.T01 |
| Chr3 | CDS | 58188331 | 58189003 | 58188331 | ID=MsG0380014668.01.T01:cds;Parent=MsG0380014668.01.T01 |
| Chr3 | CDS | 58187600 | 58187775 | 58187600 | ID=MsG0380014668.01.T01:cds;Parent=MsG0380014668.01.T01 |
| Chr3 | CDS | 58186998 | 58187459 | 58186998 | ID=MsG0380014668.01.T01:cds;Parent=MsG0380014668.01.T01 |
| Gene Sequence |
| Protein sequence |
