Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040472.01.T01 | CAB3478619.1 | 88.255 | 298 | 10 | 1 | 7 | 279 | 13 | 310 | 0 | 547 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040472.01.T01 | P29514 | 98.065 | 155 | 3 | 0 | 125 | 279 | 279 | 433 | 1.37E-105 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040472.01.T01 | A0A5P1EJR1 | 77.946 | 331 | 15 | 2 | 7 | 279 | 13 | 343 | 0.0 | 525 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048996.01 | MsG0780040472.01 | 0.822891 | 1.858017e-53 | 1.575334e-50 |
| MsG0180000275.01 | MsG0780040472.01 | 0.822292 | 2.561190e-53 | 2.134885e-50 |
| MsG0180002486.01 | MsG0780040472.01 | 0.800809 | 1.210605e-48 | 5.690046e-46 |
| MsG0180003786.01 | MsG0780040472.01 | 0.801295 | 9.631589e-49 | 4.583189e-46 |
| MsG0180003920.01 | MsG0780040472.01 | 0.808672 | 2.760356e-50 | 1.587924e-47 |
| MsG0180004375.01 | MsG0780040472.01 | 0.803706 | 3.067049e-49 | 1.551873e-46 |
| MsG0180004754.01 | MsG0780040472.01 | 0.815305 | 9.898307e-52 | 6.799379e-49 |
| MsG0180005530.01 | MsG0780040472.01 | 0.807057 | 6.085937e-50 | 3.356367e-47 |
| MsG0180006000.01 | MsG0780040472.01 | 0.817583 | 3.058975e-52 | 2.236524e-49 |
| MsG0180006221.01 | MsG0780040472.01 | 0.813424 | 2.577709e-51 | 1.682729e-48 |
| MsG0780040281.01 | MsG0780040472.01 | 0.804865 | 1.759594e-49 | 9.173795e-47 |
| MsG0780040365.01 | MsG0780040472.01 | 0.916278 | 2.159761e-85 | 5.894280e-81 |
| MsG0780040472.01 | MsG0780040482.01 | 0.808514 | 2.984101e-50 | 1.709630e-47 |
| MsG0780040472.01 | MsG0780040509.01 | 0.839507 | 1.520101e-57 | 2.103670e-54 |
| MsG0780040472.01 | MsG0780040926.01 | 0.853944 | 1.709461e-61 | 3.756419e-58 |
| MsG0780040472.01 | MsG0780041063.01 | 0.810069 | 1.384314e-50 | 8.264237e-48 |
| MsG0780040472.01 | MsG0780041209.01 | 0.805500 | 1.295578e-49 | 6.865106e-47 |
| MsG0780040472.01 | MsG0780041735.01 | 0.869124 | 3.916854e-66 | 1.453168e-62 |
| MsG0780040472.01 | MsG0880041986.01 | 0.812504 | 4.101768e-51 | 2.612530e-48 |
| MsG0780040472.01 | MsG0880042544.01 | 0.837468 | 5.105634e-57 | 6.638520e-54 |
| MsG0780040472.01 | MsG0880042773.01 | 0.821323 | 4.291150e-53 | 3.479933e-50 |
| MsG0780040472.01 | MsG0880043614.01 | 0.830967 | 2.179075e-55 | 2.331899e-52 |
| MsG0780040472.01 | MsG0880044008.01 | 0.804401 | 2.199349e-49 | 1.132862e-46 |
| MsG0780040472.01 | MsG0880044555.01 | 0.819668 | 1.029325e-52 | 7.971922e-50 |
| MsG0780040472.01 | MsG0880044782.01 | 0.833122 | 6.394714e-56 | 7.295747e-53 |
| MsG0780040472.01 | MsG0880045483.01 | 0.832366 | 9.847614e-56 | 1.098317e-52 |
| MsG0780040472.01 | MsG0880045838.01 | 0.818676 | 1.731086e-52 | 1.304300e-49 |
| MsG0780040472.01 | MsG0880045915.01 | 0.800280 | 1.551765e-48 | 7.196676e-46 |
| MsG0780040472.01 | MsG0880046086.01 | 0.808229 | 3.431684e-50 | 1.951458e-47 |
| MsG0780040472.01 | MsG0880046446.01 | 0.800279 | 1.552681e-48 | 7.200719e-46 |
| MsG0780040472.01 | MsG0880046706.01 | 0.808063 | 3.723667e-50 | 2.108135e-47 |
| MsG0780040472.01 | MsG0880046922.01 | 0.803061 | 4.171774e-49 | 2.076137e-46 |
| MsG0280010977.01 | MsG0780040472.01 | 0.837458 | 5.136077e-57 | 6.676035e-54 |
| MsG0280011014.01 | MsG0780040472.01 | 0.804318 | 2.287990e-49 | 1.176042e-46 |
| MsG0280011388.01 | MsG0780040472.01 | 0.800578 | 1.349831e-48 | 6.307452e-46 |
| MsG0280011416.01 | MsG0780040472.01 | 0.824037 | 1.002452e-53 | 8.778172e-51 |
| MsG0380014668.01 | MsG0780040472.01 | 0.853368 | 2.503161e-61 | 5.395974e-58 |
| MsG0380014778.01 | MsG0780040472.01 | 0.807614 | 4.638515e-50 | 2.595287e-47 |
| MsG0380014808.01 | MsG0780040472.01 | 0.814653 | 1.380484e-51 | 9.316935e-49 |
| MsG0680030865.01 | MsG0780040472.01 | 0.834525 | 2.849812e-56 | 3.391030e-53 |
| MsG0680030918.01 | MsG0780040472.01 | 0.800006 | 1.764671e-48 | 8.127007e-46 |
| MsG0680031549.01 | MsG0780040472.01 | 0.809438 | 1.892291e-50 | 1.111016e-47 |
| MsG0680032499.01 | MsG0780040472.01 | 0.813771 | 2.162062e-51 | 1.424682e-48 |
| MsG0480019922.01 | MsG0780040472.01 | 0.816675 | 4.893314e-52 | 3.489828e-49 |
| MsG0480020597.01 | MsG0780040472.01 | 0.846529 | 2.051434e-59 | 3.541499e-56 |
| MsG0480020699.01 | MsG0780040472.01 | 0.819532 | 1.105215e-52 | 8.527727e-50 |
| MsG0480020847.01 | MsG0780040472.01 | 0.808205 | 3.472492e-50 | 1.973446e-47 |
| MsG0480020909.01 | MsG0780040472.01 | 0.803521 | 3.350679e-49 | 1.687450e-46 |
| MsG0480021322.01 | MsG0780040472.01 | 0.818627 | 1.776086e-52 | 1.336347e-49 |
| MsG0480021719.01 | MsG0780040472.01 | 0.815845 | 7.503855e-52 | 5.231224e-49 |
| MsG0480021984.01 | MsG0780040472.01 | 0.851584 | 8.067768e-61 | 1.640595e-57 |
| MsG0480022325.01 | MsG0780040472.01 | 0.829607 | 4.683474e-55 | 4.817123e-52 |
| MsG0480022755.01 | MsG0780040472.01 | 0.820922 | 5.310614e-53 | 4.259018e-50 |
| MsG0480022806.01 | MsG0780040472.01 | 0.811146 | 8.101885e-51 | 4.976557e-48 |
| MsG0480022877.01 | MsG0780040472.01 | 0.801103 | 1.054498e-48 | 4.993786e-46 |
| MsG0480022952.01 | MsG0780040472.01 | 0.810590 | 1.068583e-50 | 6.467471e-48 |
| MsG0480023146.01 | MsG0780040472.01 | 0.829094 | 6.237806e-55 | 6.320011e-52 |
| MsG0480023463.01 | MsG0780040472.01 | 0.821213 | 4.551282e-53 | 3.679761e-50 |
| MsG0480023647.01 | MsG0780040472.01 | 0.828685 | 7.836502e-55 | 7.845162e-52 |
| MsG0480023762.01 | MsG0780040472.01 | 0.801095 | 1.058317e-48 | 5.010964e-46 |
| MsG0580024109.01 | MsG0780040472.01 | 0.822411 | 2.403861e-53 | 2.010581e-50 |
| MsG0580024317.01 | MsG0780040472.01 | 0.823889 | 1.086233e-53 | 9.473174e-51 |
| MsG0580025645.01 | MsG0780040472.01 | 0.844316 | 8.153631e-59 | 1.311226e-55 |
| MsG0580026059.01 | MsG0780040472.01 | 0.805801 | 1.120345e-49 | 5.982799e-47 |
| MsG0380015350.01 | MsG0780040472.01 | 0.816268 | 6.035752e-52 | 4.257185e-49 |
| MsG0380015548.01 | MsG0780040472.01 | 0.804850 | 1.772462e-49 | 9.237033e-47 |
| MsG0380016140.01 | MsG0780040472.01 | 0.807730 | 4.382158e-50 | 2.459456e-47 |
| MsG0380016247.01 | MsG0780040472.01 | 0.827762 | 1.308119e-54 | 1.274751e-51 |
| MsG0380016703.01 | MsG0780040472.01 | 0.812291 | 4.565845e-51 | 2.891655e-48 |
| MsG0380016920.01 | MsG0780040472.01 | 0.811301 | 7.498661e-51 | 4.624682e-48 |
| MsG0380016994.01 | MsG0780040472.01 | 0.829210 | 5.845899e-55 | 5.943862e-52 |
| MsG0380017159.01 | MsG0780040472.01 | 0.869751 | 2.448804e-66 | 9.290704e-63 |
| MsG0380017240.01 | MsG0780040472.01 | 0.807819 | 4.194529e-50 | 2.359571e-47 |
| MsG0380017559.01 | MsG0780040472.01 | 0.847956 | 8.328823e-60 | 1.504970e-56 |
| MsG0380017836.01 | MsG0780040472.01 | 0.804806 | 1.810447e-49 | 9.424234e-47 |
| MsG0380017996.01 | MsG0780040472.01 | 0.820365 | 7.129722e-53 | 5.629917e-50 |
| MsG0580026145.01 | MsG0780040472.01 | 0.851867 | 6.707187e-61 | 1.376090e-57 |
| MsG0580026593.01 | MsG0780040472.01 | 0.800656 | 1.301142e-48 | 6.092153e-46 |
| MsG0580027431.01 | MsG0780040472.01 | 0.807218 | 5.627728e-50 | 3.116716e-47 |
| MsG0580028060.01 | MsG0780040472.01 | 0.861523 | 9.666347e-64 | 2.743259e-60 |
| MsG0580028897.01 | MsG0780040472.01 | 0.803388 | 3.570884e-49 | 1.792088e-46 |
| MsG0580029127.01 | MsG0780040472.01 | 0.849246 | 3.657122e-60 | 6.891423e-57 |
| MsG0280007196.01 | MsG0780040472.01 | 0.809910 | 1.497890e-50 | 8.905136e-48 |
| MsG0280007226.01 | MsG0780040472.01 | 0.800746 | 1.246969e-48 | 5.851710e-46 |
| MsG0280007632.01 | MsG0780040472.01 | 0.802449 | 5.580496e-49 | 2.734380e-46 |
| MsG0280008614.01 | MsG0780040472.01 | 0.804625 | 1.974179e-49 | 1.022792e-46 |
| MsG0280009514.01 | MsG0780040472.01 | 0.800059 | 1.721523e-48 | 7.939043e-46 |
| MsG0280009794.01 | MsG0780040472.01 | 0.848234 | 6.979510e-60 | 1.272354e-56 |
| MsG0280010002.01 | MsG0780040472.01 | 0.804911 | 1.720602e-49 | 8.981338e-47 |
| MsG0280010015.01 | MsG0780040472.01 | 0.843461 | 1.381819e-58 | 2.163521e-55 |
| MsG0780036752.01 | MsG0780040472.01 | 0.839123 | 1.912892e-57 | 2.615983e-54 |
| MsG0780036815.01 | MsG0780040472.01 | 0.805913 | 1.061149e-49 | 5.683037e-47 |
| MsG0780036823.01 | MsG0780040472.01 | 0.801623 | 8.251668e-49 | 3.958937e-46 |
| MsG0780036941.01 | MsG0780040472.01 | 0.805212 | 1.488819e-49 | 7.830975e-47 |
| MsG0780038332.01 | MsG0780040472.01 | 0.808055 | 3.737492e-50 | 2.115480e-47 |
| MsG0780039189.01 | MsG0780040472.01 | 0.806470 | 8.100645e-50 | 4.400426e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040472.01.T01 | MTR_7g089120 | 98.710 | 155 | 2 | 0 | 125 | 279 | 279 | 433 | 3.29e-107 | 319 |
| MsG0780040472.01.T01 | MTR_7g089120 | 94.309 | 123 | 7 | 0 | 7 | 129 | 13 | 135 | 3.37e-83 | 258 |
| MsG0780040472.01.T01 | MTR_2g031310 | 96.053 | 152 | 6 | 0 | 125 | 276 | 279 | 430 | 1.05e-102 | 307 |
| MsG0780040472.01.T01 | MTR_2g031310 | 84.553 | 123 | 19 | 0 | 7 | 129 | 13 | 135 | 9.91e-75 | 236 |
| MsG0780040472.01.T01 | MTR_1g101130 | 96.053 | 152 | 6 | 0 | 125 | 276 | 279 | 430 | 3.67e-102 | 306 |
| MsG0780040472.01.T01 | MTR_1g101130 | 89.431 | 123 | 13 | 0 | 7 | 129 | 13 | 135 | 2.70e-78 | 245 |
| MsG0780040472.01.T01 | MTR_4g019090 | 94.737 | 152 | 8 | 0 | 125 | 276 | 279 | 430 | 4.69e-101 | 303 |
| MsG0780040472.01.T01 | MTR_4g019090 | 89.431 | 123 | 13 | 0 | 7 | 129 | 13 | 135 | 8.09e-79 | 246 |
| MsG0780040472.01.T01 | MTR_4g019110 | 94.079 | 152 | 9 | 0 | 125 | 276 | 279 | 430 | 8.80e-101 | 303 |
| MsG0780040472.01.T01 | MTR_4g019110 | 88.618 | 123 | 14 | 0 | 7 | 129 | 13 | 135 | 3.73e-77 | 242 |
| MsG0780040472.01.T01 | MTR_4g094535 | 93.421 | 152 | 10 | 0 | 125 | 276 | 279 | 430 | 6.21e-100 | 300 |
| MsG0780040472.01.T01 | MTR_4g094535 | 82.927 | 123 | 21 | 0 | 7 | 129 | 13 | 135 | 2.00e-73 | 232 |
| MsG0780040472.01.T01 | MTR_8g107250 | 90.323 | 155 | 15 | 0 | 125 | 279 | 280 | 434 | 1.45e-99 | 300 |
| MsG0780040472.01.T01 | MTR_8g107250 | 82.258 | 124 | 21 | 1 | 7 | 129 | 13 | 136 | 4.09e-71 | 226 |
| MsG0780040472.01.T01 | MTR_4g017630 | 92.763 | 152 | 11 | 0 | 125 | 276 | 279 | 430 | 1.52e-99 | 300 |
| MsG0780040472.01.T01 | MTR_4g017630 | 86.992 | 123 | 16 | 0 | 7 | 129 | 13 | 135 | 3.73e-77 | 242 |
| MsG0780040472.01.T01 | MTR_3g113970 | 91.447 | 152 | 13 | 0 | 125 | 276 | 281 | 432 | 7.84e-98 | 295 |
| MsG0780040472.01.T01 | MTR_3g113970 | 82.400 | 125 | 20 | 1 | 7 | 129 | 13 | 137 | 2.01e-73 | 233 |
| MsG0780040472.01.T01 | MTR_8g098360 | 88.816 | 152 | 17 | 0 | 125 | 276 | 279 | 430 | 5.00e-96 | 290 |
| MsG0780040472.01.T01 | MTR_8g098360 | 84.426 | 122 | 19 | 0 | 7 | 128 | 13 | 134 | 5.65e-74 | 234 |
| MsG0780040472.01.T01 | MTR_7g085800 | 34.228 | 149 | 90 | 2 | 130 | 270 | 286 | 434 | 1.74e-29 | 116 |
| MsG0780040472.01.T01 | MTR_7g085800 | 41.667 | 120 | 68 | 1 | 9 | 126 | 15 | 134 | 1.02e-27 | 112 |
| MsG0780040472.01.T01 | MTR_3g110720 | 43.902 | 123 | 61 | 2 | 9 | 126 | 15 | 134 | 2.22e-29 | 116 |
| MsG0780040472.01.T01 | MTR_3g110720 | 34.899 | 149 | 89 | 2 | 130 | 270 | 286 | 434 | 7.22e-29 | 115 |
| MsG0780040472.01.T01 | MTR_8g085980 | 43.333 | 120 | 66 | 1 | 9 | 126 | 15 | 134 | 3.69e-29 | 115 |
| MsG0780040472.01.T01 | MTR_8g085980 | 34.228 | 149 | 90 | 2 | 130 | 270 | 286 | 434 | 4.12e-29 | 115 |
| MsG0780040472.01.T01 | MTR_1g106005 | 43.089 | 123 | 62 | 2 | 9 | 126 | 15 | 134 | 5.24e-29 | 115 |
| MsG0780040472.01.T01 | MTR_1g106005 | 34.899 | 149 | 89 | 2 | 130 | 270 | 286 | 434 | 1.00e-28 | 114 |
| MsG0780040472.01.T01 | MTR_4g097830 | 34.899 | 149 | 89 | 2 | 130 | 270 | 286 | 434 | 7.59e-29 | 115 |
| MsG0780040472.01.T01 | MTR_4g097830 | 43.089 | 123 | 62 | 2 | 9 | 126 | 15 | 134 | 8.14e-29 | 115 |
| MsG0780040472.01.T01 | MTR_6g029190 | 32.911 | 158 | 98 | 2 | 130 | 279 | 287 | 444 | 1.53e-28 | 114 |
| MsG0780040472.01.T01 | MTR_6g029190 | 41.322 | 121 | 68 | 1 | 9 | 126 | 15 | 135 | 4.12e-27 | 110 |
| MsG0780040472.01.T01 | MTR_2g041400 | 39.167 | 120 | 68 | 3 | 9 | 127 | 15 | 130 | 1.16e-23 | 100 |
| MsG0780040472.01.T01 | MTR_2g041400 | 27.273 | 143 | 96 | 2 | 130 | 264 | 281 | 423 | 4.49e-17 | 81.3 |
| MsG0780040472.01.T01 | MTR_2g041670 | 39.167 | 120 | 68 | 3 | 9 | 127 | 15 | 130 | 1.59e-23 | 100 |
| MsG0780040472.01.T01 | MTR_2g041670 | 27.907 | 172 | 116 | 2 | 134 | 297 | 285 | 456 | 3.90e-20 | 90.5 |
| MsG0780040472.01.T01 | MTR_3g063410 | 31.667 | 120 | 74 | 2 | 130 | 241 | 19 | 138 | 3.20e-18 | 80.5 |
| MsG0780040472.01.T01 | MTR_3g063410 | 31.667 | 120 | 74 | 2 | 130 | 241 | 58 | 177 | 1.04e-17 | 80.1 |
| MsG0780040472.01.T01 | MTR_7g117050 | 31.967 | 122 | 80 | 2 | 7 | 126 | 14 | 134 | 5.83e-17 | 81.3 |
| MsG0780040472.01.T01 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 223 | 251 | 1 | 29 | 5.56e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040472.01.T01 | AT5G12250 | 98.065 | 155 | 3 | 0 | 125 | 279 | 279 | 433 | 1.40e-106 | 318 |
| MsG0780040472.01.T01 | AT5G12250 | 93.496 | 123 | 8 | 0 | 7 | 129 | 13 | 135 | 1.98e-82 | 256 |
| MsG0780040472.01.T01 | AT5G23860 | 95.395 | 152 | 7 | 0 | 125 | 276 | 279 | 430 | 1.09e-101 | 305 |
| MsG0780040472.01.T01 | AT5G23860 | 88.618 | 123 | 14 | 0 | 7 | 129 | 13 | 135 | 2.83e-77 | 243 |
| MsG0780040472.01.T01 | AT5G23860 | 95.395 | 152 | 7 | 0 | 125 | 276 | 279 | 430 | 1.09e-101 | 305 |
| MsG0780040472.01.T01 | AT5G23860 | 88.618 | 123 | 14 | 0 | 7 | 129 | 13 | 135 | 2.83e-77 | 243 |
| MsG0780040472.01.T01 | AT2G29550 | 94.118 | 153 | 9 | 0 | 125 | 277 | 279 | 431 | 2.86e-101 | 304 |
| MsG0780040472.01.T01 | AT2G29550 | 88.618 | 123 | 14 | 0 | 7 | 129 | 13 | 135 | 3.25e-76 | 240 |
| MsG0780040472.01.T01 | AT5G62700 | 94.737 | 152 | 8 | 0 | 125 | 276 | 279 | 430 | 3.07e-101 | 304 |
| MsG0780040472.01.T01 | AT5G62700 | 87.805 | 123 | 15 | 0 | 7 | 129 | 13 | 135 | 1.91e-78 | 246 |
| MsG0780040472.01.T01 | AT5G62690 | 94.737 | 152 | 8 | 0 | 125 | 276 | 279 | 430 | 3.07e-101 | 304 |
| MsG0780040472.01.T01 | AT5G62690 | 87.805 | 123 | 15 | 0 | 7 | 129 | 13 | 135 | 1.91e-78 | 246 |
| MsG0780040472.01.T01 | AT5G44340 | 92.105 | 152 | 12 | 0 | 125 | 276 | 279 | 430 | 7.49e-100 | 300 |
| MsG0780040472.01.T01 | AT5G44340 | 81.301 | 123 | 23 | 0 | 7 | 129 | 13 | 135 | 8.50e-72 | 228 |
| MsG0780040472.01.T01 | AT4G20890 | 92.763 | 152 | 11 | 0 | 125 | 276 | 279 | 430 | 3.46e-99 | 298 |
| MsG0780040472.01.T01 | AT4G20890 | 80.488 | 123 | 24 | 0 | 7 | 129 | 13 | 135 | 2.09e-71 | 227 |
| MsG0780040472.01.T01 | AT1G75780 | 92.105 | 152 | 12 | 0 | 125 | 276 | 280 | 431 | 5.52e-99 | 298 |
| MsG0780040472.01.T01 | AT1G75780 | 85.484 | 124 | 17 | 1 | 7 | 129 | 13 | 136 | 7.86e-76 | 239 |
| MsG0780040472.01.T01 | AT1G20010 | 90.132 | 152 | 15 | 0 | 125 | 276 | 280 | 431 | 3.54e-98 | 296 |
| MsG0780040472.01.T01 | AT1G20010 | 83.871 | 124 | 19 | 1 | 7 | 129 | 13 | 136 | 5.24e-74 | 234 |
| MsG0780040472.01.T01 | AT4G14960 | 43.902 | 123 | 61 | 2 | 9 | 126 | 15 | 134 | 9.41e-30 | 117 |
| MsG0780040472.01.T01 | AT4G14960 | 31.683 | 101 | 61 | 2 | 130 | 222 | 286 | 386 | 6.76e-11 | 63.2 |
| MsG0780040472.01.T01 | AT1G04820 | 43.902 | 123 | 61 | 2 | 9 | 126 | 15 | 134 | 2.32e-29 | 116 |
| MsG0780040472.01.T01 | AT1G04820 | 34.899 | 149 | 89 | 2 | 130 | 270 | 286 | 434 | 2.18e-28 | 114 |
| MsG0780040472.01.T01 | AT1G50010 | 43.902 | 123 | 61 | 2 | 9 | 126 | 15 | 134 | 2.32e-29 | 116 |
| MsG0780040472.01.T01 | AT1G50010 | 34.899 | 149 | 89 | 2 | 130 | 270 | 286 | 434 | 2.18e-28 | 114 |
| MsG0780040472.01.T01 | AT4G14960 | 43.902 | 123 | 61 | 2 | 9 | 126 | 15 | 134 | 2.49e-29 | 116 |
| MsG0780040472.01.T01 | AT4G14960 | 34.899 | 149 | 89 | 2 | 130 | 270 | 286 | 434 | 2.11e-28 | 114 |
| MsG0780040472.01.T01 | AT5G19780 | 43.333 | 120 | 66 | 1 | 9 | 126 | 15 | 134 | 2.72e-29 | 116 |
| MsG0780040472.01.T01 | AT5G19780 | 34.228 | 149 | 90 | 2 | 130 | 270 | 286 | 434 | 5.27e-29 | 115 |
| MsG0780040472.01.T01 | AT5G19770 | 43.333 | 120 | 66 | 1 | 9 | 126 | 15 | 134 | 2.72e-29 | 116 |
| MsG0780040472.01.T01 | AT5G19770 | 34.228 | 149 | 90 | 2 | 130 | 270 | 286 | 434 | 5.27e-29 | 115 |
| MsG0780040472.01.T01 | AT1G64740 | 43.333 | 120 | 66 | 1 | 9 | 126 | 15 | 134 | 3.46e-29 | 115 |
| MsG0780040472.01.T01 | AT1G64740 | 34.228 | 149 | 90 | 2 | 130 | 270 | 286 | 434 | 4.15e-29 | 115 |
| MsG0780040472.01.T01 | AT5G05620 | 32.787 | 122 | 79 | 2 | 7 | 126 | 14 | 134 | 1.08e-17 | 83.6 |
| MsG0780040472.01.T01 | AT3G61650 | 32.787 | 122 | 79 | 2 | 7 | 126 | 14 | 134 | 1.61e-17 | 82.8 |
Find 100 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAGATCGGTTCAAAATTC+TGG | 0.202910 | 7:-78089654 | MsG0780040472.01.T01:CDS |
| TCCATGGCCTCCACCTTTAT+TGG | 0.234232 | 7:-78087748 | MsG0780040472.01.T01:CDS |
| ACACTTGATTTAACATTGTT+TGG | 0.235866 | 7:+78087796 | None:intergenic |
| TCACTGCTTCTGCCATGTTC+AGG | 0.262035 | 7:-78087900 | MsG0780040472.01.T01:CDS |
| CATTTGCTCATCCACCTCTT+TGG | 0.277735 | 7:+78087864 | None:intergenic |
| CACATCTGCTGGGTGAGTTC+TGG | 0.279765 | 7:+78087973 | None:intergenic |
| TGGTAACTCAACCTCAATTC+AGG | 0.292483 | 7:-78087728 | MsG0780040472.01.T01:CDS |
| AGCAGCACACATCATGTTCT+TGG | 0.331795 | 7:+78087945 | None:intergenic |
| TGACCGAAGACGAAGTTATC+AGG | 0.336132 | 7:+78089436 | None:intergenic |
| AGTCCGGTGCCGGTACCAAT+TGG | 0.337562 | 7:-78089414 | MsG0780040472.01.T01:CDS |
| TGAGGTTGAGTTACCAATAA+AGG | 0.339217 | 7:+78087735 | None:intergenic |
| CCTCAATTCAGGAAATGTTT+AGG | 0.342965 | 7:-78087717 | MsG0780040472.01.T01:CDS |
| TCTTGGAATCCCACATCTGC+TGG | 0.346211 | 7:+78087962 | None:intergenic |
| GTGAGGAGAGTGACGAGTTT+TGG | 0.357490 | 7:+78089835 | None:intergenic |
| CACTTGATTTAACATTGTTT+GGG | 0.358488 | 7:+78087797 | None:intergenic |
| GAGAATTGTGATTGTCTTCA+AGG | 0.384367 | 7:-78089322 | MsG0780040472.01.T01:intron |
| TGAAAATGTGGACAAAATAT+TGG | 0.387101 | 7:+78089899 | None:intergenic |
| AGTAGGAAGAGTTCTTGTTC+TGG | 0.394999 | 7:+78087833 | None:intergenic |
| AGCAATTTACTGCTATGTTT+AGG | 0.401883 | 7:-78087684 | MsG0780040472.01.T01:CDS |
| CACTGCTTCTGCCATGTTCA+GGG | 0.405397 | 7:-78087899 | MsG0780040472.01.T01:CDS |
| CCTAAACATTTCCTGAATTG+AGG | 0.415373 | 7:+78087717 | None:intergenic |
| AGAGAAATTCTTCATGTTCA+AGG | 0.425268 | 7:-78089689 | MsG0780040472.01.T01:exon |
| TGAGTTTCCGACGTATCTTC+CGG | 0.427531 | 7:+78089597 | None:intergenic |
| CCAGATCGGTTCAAAATTCT+GGG | 0.430206 | 7:-78089653 | MsG0780040472.01.T01:CDS |
| CGCCCAATTGGTACCGGCAC+CGG | 0.430402 | 7:+78089411 | None:intergenic |
| ACGCGCCATCCTCATGGACT+TGG | 0.430677 | 7:-78089512 | MsG0780040472.01.T01:CDS |
| AACTTCGTCTTCGGTCAGTC+CGG | 0.442188 | 7:-78089430 | MsG0780040472.01.T01:CDS |
| GTCCGGTGCCGGTACCAATT+GGG | 0.454258 | 7:-78089413 | MsG0780040472.01.T01:CDS |
| ATAATGTCCTTTCGCCCAAT+TGG | 0.455972 | 7:+78089399 | None:intergenic |
| ACCAATAAAGGTGGAGGCCA+TGG | 0.456675 | 7:+78087747 | None:intergenic |
| CAGTGGCATCCTGGTACTGC+TGG | 0.458734 | 7:+78087566 | None:intergenic |
| ATCCTCATGGACTTGGAGCC+TGG | 0.462721 | 7:-78089505 | MsG0780040472.01.T01:CDS |
| TACTGCTATGTTTAGGAGGA+AGG | 0.463039 | 7:-78087677 | MsG0780040472.01.T01:CDS |
| TCTCGATGTTGTTCGTAAAG+AGG | 0.464617 | 7:-78089347 | MsG0780040472.01.T01:CDS |
| GGACTTGGAGCCTGGTACAA+TGG | 0.467426 | 7:-78089497 | MsG0780040472.01.T01:CDS |
| CGTCCTGATAACTTCGTCTT+CGG | 0.467522 | 7:-78089439 | MsG0780040472.01.T01:CDS |
| CTTCATCAGCAGTGGCATCC+TGG | 0.470075 | 7:+78087557 | None:intergenic |
| GGATGGGAAAATGGTTGAGC+GGG | 0.475027 | 7:+78089856 | None:intergenic |
| GGAGGAAGGCTTTCTTGCAT+TGG | 0.483915 | 7:-78087663 | MsG0780040472.01.T01:CDS |
| TCCTTTCGCCCAATTGGTAC+CGG | 0.486769 | 7:+78089405 | None:intergenic |
| GCTTTCTTGCATTGGTACAC+TGG | 0.499379 | 7:-78087655 | MsG0780040472.01.T01:CDS |
| TGTTCCACGCGCCATCCTCA+TGG | 0.500720 | 7:-78089518 | MsG0780040472.01.T01:CDS |
| CAGAACTCACCCAGCAGATG+TGG | 0.503870 | 7:-78087972 | MsG0780040472.01.T01:CDS |
| GTCTTCGGTCAGTCCGGTGC+CGG | 0.504309 | 7:-78089424 | MsG0780040472.01.T01:CDS |
| TGATGTGTGCTGCTGATCCT+AGG | 0.510462 | 7:-78087936 | MsG0780040472.01.T01:CDS |
| CTCATCTTCATCACTATCAC+AGG | 0.518767 | 7:-78089813 | MsG0780040472.01.T01:intron |
| TTGCATTGGTACACTGGTGA+AGG | 0.524227 | 7:-78087649 | MsG0780040472.01.T01:CDS |
| CGAACACTGTCCATTGTACC+AGG | 0.531519 | 7:+78089487 | None:intergenic |
| GCCGGTACCAATTGGGCGAA+AGG | 0.533517 | 7:-78089406 | MsG0780040472.01.T01:CDS |
| CTTGGAATCCCACATCTGCT+GGG | 0.536021 | 7:+78087963 | None:intergenic |
| CTGATGAAGAAGAGAATATG+AGG | 0.536913 | 7:-78087543 | MsG0780040472.01.T01:CDS |
| GTCTGAGTACCAGCAGTACC+AGG | 0.537588 | 7:-78087575 | MsG0780040472.01.T01:CDS |
| TTTCCGACGTATCTTCCGGT+TGG | 0.537588 | 7:+78089601 | None:intergenic |
| ACTCTTCCTACTTTGTTGAG+TGG | 0.537980 | 7:-78087822 | MsG0780040472.01.T01:CDS |
| AGTGTTCGCACTGGTCCTTA+CGG | 0.544816 | 7:-78089472 | MsG0780040472.01.T01:CDS |
| AATTTACTGCTATGTTTAGG+AGG | 0.549323 | 7:-78087681 | MsG0780040472.01.T01:CDS |
| TGGTGAAGGCATGGATGAGA+TGG | 0.552982 | 7:-78087635 | MsG0780040472.01.T01:CDS |
| ATATGAGGACGAAGAGGACG+AGG | 0.557142 | 7:-78087528 | MsG0780040472.01.T01:CDS |
| GTGAGGTAGCGACCATGCCT+AGG | 0.560055 | 7:+78087919 | None:intergenic |
| CAATTCAGGAAATGTTTAGG+AGG | 0.566101 | 7:-78087714 | MsG0780040472.01.T01:CDS |
| TGCTCCTCGAGGTCTCTCCA+TGG | 0.570432 | 7:-78087764 | MsG0780040472.01.T01:CDS |
| TGGGATCCACTCAACAAAGT+AGG | 0.583322 | 7:+78087816 | None:intergenic |
| TTGGTACACTGGTGAAGGCA+TGG | 0.586360 | 7:-78087644 | MsG0780040472.01.T01:CDS |
| ATTCTCTTCTTCATCAGCAG+TGG | 0.587534 | 7:+78087549 | None:intergenic |
| TGAGTTACCAATAAAGGTGG+AGG | 0.588019 | 7:+78087741 | None:intergenic |
| GAGCACGGCATAGATCCAAC+CGG | 0.589745 | 7:-78089616 | MsG0780040472.01.T01:CDS |
| GAAGTAGTTTGCGACGAGCA+CGG | 0.593265 | 7:-78089631 | MsG0780040472.01.T01:CDS |
| ACAACGAAGCCTCCTGTGGA+AGG | 0.594540 | 7:-78089543 | MsG0780040472.01.T01:CDS |
| ACTGCTTCTGCCATGTTCAG+GGG | 0.596534 | 7:-78087898 | MsG0780040472.01.T01:CDS |
| TGGATGGGAAAATGGTTGAG+CGG | 0.598292 | 7:+78089855 | None:intergenic |
| GCGTGGAACAAACCTTCCAC+AGG | 0.601663 | 7:+78089531 | None:intergenic |
| TAAGATGAGCACCAAAGAGG+TGG | 0.605176 | 7:-78087875 | MsG0780040472.01.T01:CDS |
| GGTTGAGTTACCAATAAAGG+TGG | 0.607360 | 7:+78087738 | None:intergenic |
| GAGGACAATGCGAACCAGAT+CGG | 0.608753 | 7:-78089667 | MsG0780040472.01.T01:CDS |
| AATTCAGGAAATGTTTAGGA+GGG | 0.609115 | 7:-78087713 | MsG0780040472.01.T01:CDS |
| ACAATGGACAGTGTTCGCAC+TGG | 0.609664 | 7:-78089481 | MsG0780040472.01.T01:CDS |
| GCTCATCTTACCCCTGAACA+TGG | 0.612907 | 7:+78087888 | None:intergenic |
| AAGAGAATATGAGGACGAAG+AGG | 0.613372 | 7:-78087534 | MsG0780040472.01.T01:CDS |
| AGCGAGATAGAGTGAAAATG+TGG | 0.613930 | 7:+78089887 | None:intergenic |
| AGGCTCCAAGTCCATGAGGA+TGG | 0.616165 | 7:+78089507 | None:intergenic |
| AGAACTCACCCAGCAGATGT+GGG | 0.617381 | 7:-78087971 | MsG0780040472.01.T01:CDS |
| TCACTTCTCATCACAAAGCG+AGG | 0.619680 | 7:-78089925 | MsG0780040472.01.T01:five_prime_UTR |
| TGTGCTGCTGATCCTAGGCA+TGG | 0.620259 | 7:-78087931 | MsG0780040472.01.T01:CDS |
| GATAGTGATGAAGATGAGTG+AGG | 0.621512 | 7:+78089818 | None:intergenic |
| GCGAAAGGACATTATACTGA+AGG | 0.631149 | 7:-78089391 | MsG0780040472.01.T01:CDS |
| GGACGGAAGATCTGACCGTA+AGG | 0.631185 | 7:+78089457 | None:intergenic |
| GTTTGTGACATTGCTCCTCG+AGG | 0.633730 | 7:-78087775 | MsG0780040472.01.T01:CDS |
| CACTTCTCATCACAAAGCGA+GGG | 0.636087 | 7:-78089924 | MsG0780040472.01.T01:five_prime_UTR |
| TACTACAACGAAGCCTCCTG+TGG | 0.636492 | 7:-78089547 | MsG0780040472.01.T01:CDS |
| AAGTCCATGAGGATGGCGCG+TGG | 0.636612 | 7:+78089514 | None:intergenic |
| TGGAACAAACCTTCCACAGG+AGG | 0.640659 | 7:+78089534 | None:intergenic |
| CTTTGTGATGAGAAGTGATG+TGG | 0.645586 | 7:+78089930 | None:intergenic |
| GAGGCCATGGAGAGACCTCG+AGG | 0.661607 | 7:+78087760 | None:intergenic |
| GGGTAAGATGAGCACCAAAG+AGG | 0.672077 | 7:-78087878 | MsG0780040472.01.T01:CDS |
| CGAAGACGAAGTTATCAGGA+CGG | 0.676420 | 7:+78089440 | None:intergenic |
| GAAATTCTTCATGTTCAAGG+AGG | 0.679770 | 7:-78089686 | MsG0780040472.01.T01:exon |
| TACCAGGCTCCAAGTCCATG+AGG | 0.693763 | 7:+78089503 | None:intergenic |
| GATCCAACCGGAAGATACGT+CGG | 0.698972 | 7:-78089604 | MsG0780040472.01.T01:CDS |
| TGAACATGGCAGAAGCAGTG+AGG | 0.715259 | 7:+78087902 | None:intergenic |
| ACTGCTGGTACTCAGACACG+AGG | 0.785475 | 7:+78087581 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATAACAACATTAAAA+TGG | + | Chr7:78088816-78088835 | None:intergenic | 15.0% |
| !! | AAATTAGTCAGATTAAATTT+AGG | + | Chr7:78089136-78089155 | None:intergenic | 15.0% |
| !! | TAAACTTATATTTACACTTT+GGG | - | Chr7:78088932-78088951 | MsG0780040472.01.T01:intron | 15.0% |
| !! | TTAAACTTATATTTACACTT+TGG | - | Chr7:78088931-78088950 | MsG0780040472.01.T01:intron | 15.0% |
| !! | AATTTGATTGTTCACAAATT+GGG | - | Chr7:78089170-78089189 | MsG0780040472.01.T01:intron | 20.0% |
| !!! | GTGATTTTGTGATTTTTTTA+GGG | - | Chr7:78088185-78088204 | MsG0780040472.01.T01:intron | 20.0% |
| !!! | TGTGATTTTGTGATTTTTTT+AGG | - | Chr7:78088184-78088203 | MsG0780040472.01.T01:intron | 20.0% |
| ! | ACACTTGATTTAACATTGTT+TGG | + | Chr7:78089627-78089646 | None:intergenic | 25.0% |
| ! | CACTTGATTTAACATTGTTT+GGG | + | Chr7:78089626-78089645 | None:intergenic | 25.0% |
| ! | GAATTTGATTGTTCACAAAT+TGG | - | Chr7:78089169-78089188 | MsG0780040472.01.T01:intron | 25.0% |
| ! | TGAAAATGTGGACAAAATAT+TGG | + | Chr7:78087524-78087543 | None:intergenic | 25.0% |
| ! | TTGTGGTAATTATTGAATAG+TGG | - | Chr7:78088593-78088612 | MsG0780040472.01.T01:intron | 25.0% |
| !! | AATCACAACATTTTCAGTAA+TGG | + | Chr7:78089225-78089244 | None:intergenic | 25.0% |
| !!! | GATGTTAATGATCATTTTTC+TGG | - | Chr7:78089039-78089058 | MsG0780040472.01.T01:intron | 25.0% |
| !!! | GTCAGATTAGTTTTCTATTT+TGG | - | Chr7:78088687-78088706 | MsG0780040472.01.T01:intron | 25.0% |
| !!! | TCATTTTTCTGGTTCAATTA+TGG | - | Chr7:78089050-78089069 | MsG0780040472.01.T01:intron | 25.0% |
| AAATCTTGATTCTGTTATGG+CGG | - | Chr7:78088145-78088164 | MsG0780040472.01.T01:intron | 30.0% | |
| AATTCAGGAAATGTTTAGGA+GGG | - | Chr7:78089707-78089726 | MsG0780040472.01.T01:five_prime_UTR | 30.0% | |
| AATTTACTGCTATGTTTAGG+AGG | - | Chr7:78089739-78089758 | MsG0780040472.01.T01:intron | 30.0% | |
| ACAGAAAGAGTAGCATTATA+AGG | + | Chr7:78088355-78088374 | None:intergenic | 30.0% | |
| AGAGAAATTCTTCATGTTCA+AGG | - | Chr7:78087731-78087750 | MsG0780040472.01.T01:CDS | 30.0% | |
| AGCAATTTACTGCTATGTTT+AGG | - | Chr7:78089736-78089755 | MsG0780040472.01.T01:intron | 30.0% | |
| ATTTGATGCGCAATTAGTTA+TGG | - | Chr7:78088566-78088585 | MsG0780040472.01.T01:intron | 30.0% | |
| GAACAATTTGAACACTGAAA+CGG | + | Chr7:78087697-78087716 | None:intergenic | 30.0% | |
| GTGAAATCTTGATTCTGTTA+TGG | - | Chr7:78088142-78088161 | MsG0780040472.01.T01:intron | 30.0% | |
| TGGTGATTCTTAACTACTAA+TGG | - | Chr7:78089070-78089089 | MsG0780040472.01.T01:intron | 30.0% | |
| ! | CAATTAGTTATGGTTAGTTG+TGG | - | Chr7:78088576-78088595 | MsG0780040472.01.T01:intron | 30.0% |
| ! | TTTTCCCATTGAACACTTTT+CGG | - | Chr7:78089098-78089117 | MsG0780040472.01.T01:intron | 30.0% |
| !! | AAGCATTGAACAATTGCAAT+AGG | + | Chr7:78088974-78088993 | None:intergenic | 30.0% |
| !!! | TGTGATTTTTTTAGGGTTTC+AGG | - | Chr7:78088192-78088211 | MsG0780040472.01.T01:intron | 30.0% |
| AACAACAGTATCAGAACCTT+CGG | + | Chr7:78088329-78088348 | None:intergenic | 35.0% | |
| AAGAGAAAATACTCACAGCT+AGG | + | Chr7:78088467-78088486 | None:intergenic | 35.0% | |
| ACTCTTTCTGTTCATCAGTT+TGG | - | Chr7:78088364-78088383 | MsG0780040472.01.T01:intron | 35.0% | |
| AGTTTACTGATCTGGTTAGT+GGG | - | Chr7:78088867-78088886 | MsG0780040472.01.T01:intron | 35.0% | |
| ATGAATGCATCATGTGACTA+TGG | - | Chr7:78089010-78089029 | MsG0780040472.01.T01:intron | 35.0% | |
| ATGTACTCAGTTTACTGATC+TGG | - | Chr7:78088859-78088878 | MsG0780040472.01.T01:intron | 35.0% | |
| CAATTCAGGAAATGTTTAGG+AGG | - | Chr7:78089706-78089725 | MsG0780040472.01.T01:five_prime_UTR | 35.0% | |
| CCTAAACATTTCCTGAATTG+AGG | + | Chr7:78089706-78089725 | None:intergenic | 35.0% | |
| CCTCAATTCAGGAAATGTTT+AGG | - | Chr7:78089703-78089722 | MsG0780040472.01.T01:five_prime_UTR | 35.0% | |
| CTGATGAAGAAGAGAATATG+AGG | - | Chr7:78089877-78089896 | MsG0780040472.01.T01:five_prime_UTR | 35.0% | |
| GAAATTCTTCATGTTCAAGG+AGG | - | Chr7:78087734-78087753 | MsG0780040472.01.T01:CDS | 35.0% | |
| GAGAATTGTGATTGTCTTCA+AGG | - | Chr7:78088098-78088117 | MsG0780040472.01.T01:intron | 35.0% | |
| TGAGGTTGAGTTACCAATAA+AGG | + | Chr7:78089688-78089707 | None:intergenic | 35.0% | |
| TTAGAGAGGAATATCCTGAT+AGG | - | Chr7:78088273-78088292 | MsG0780040472.01.T01:intron | 35.0% | |
| ! | CTTTTCGTTGTTCATCACTA+GGG | - | Chr7:78088505-78088524 | MsG0780040472.01.T01:intron | 35.0% |
| ! | GTTGATTTCGAAGATTAGAG+AGG | - | Chr7:78088259-78088278 | MsG0780040472.01.T01:intron | 35.0% |
| ! | TAGGATGATGTTGACGTTTT+CGG | - | Chr7:78088292-78088311 | MsG0780040472.01.T01:intron | 35.0% |
| ! | TCTTTTCGTTGTTCATCACT+AGG | - | Chr7:78088504-78088523 | MsG0780040472.01.T01:intron | 35.0% |
| ! | TGACTGATTCTAGATGTTCA+AGG | - | Chr7:78088765-78088784 | MsG0780040472.01.T01:intron | 35.0% |
| !! | GTGTATGGTTCTTGATAATG+AGG | - | Chr7:78088400-78088419 | MsG0780040472.01.T01:intron | 35.0% |
| !! | TTGACCGAAAAGTGTTCAAT+GGG | + | Chr7:78089105-78089124 | None:intergenic | 35.0% |
| !! | TTTGACCGAAAAGTGTTCAA+TGG | + | Chr7:78089106-78089125 | None:intergenic | 35.0% |
| AACGTCAACATCATCCTATC+AGG | + | Chr7:78088290-78088309 | None:intergenic | 40.0% | |
| AAGAGAATATGAGGACGAAG+AGG | - | Chr7:78089886-78089905 | MsG0780040472.01.T01:five_prime_UTR | 40.0% | |
| ACTCTTCCTACTTTGTTGAG+TGG | - | Chr7:78089598-78089617 | MsG0780040472.01.T01:CDS | 40.0% | |
| AGCGAGATAGAGTGAAAATG+TGG | + | Chr7:78087536-78087555 | None:intergenic | 40.0% | |
| AGTAGGAAGAGTTCTTGTTC+TGG | + | Chr7:78089590-78089609 | None:intergenic | 40.0% | |
| ATAATGTCCTTTCGCCCAAT+TGG | + | Chr7:78088024-78088043 | None:intergenic | 40.0% | |
| ATTCTCTTCTTCATCAGCAG+TGG | + | Chr7:78089874-78089893 | None:intergenic | 40.0% | |
| CAGTTTACTGATCTGGTTAG+TGG | - | Chr7:78088866-78088885 | MsG0780040472.01.T01:intron | 40.0% | |
| CGCTTTATGATATCTGCTTC+AGG | - | Chr7:78088423-78088442 | MsG0780040472.01.T01:intron | 40.0% | |
| CTCATCTTCATCACTATCAC+AGG | - | Chr7:78087607-78087626 | MsG0780040472.01.T01:CDS | 40.0% | |
| GATAGTGATGAAGATGAGTG+AGG | + | Chr7:78087605-78087624 | None:intergenic | 40.0% | |
| GCGAAAGGACATTATACTGA+AGG | - | Chr7:78088029-78088048 | MsG0780040472.01.T01:intron | 40.0% | |
| GGAAAATGCTGATGAGTGTA+TGG | - | Chr7:78088385-78088404 | MsG0780040472.01.T01:intron | 40.0% | |
| GGTTGAGTTACCAATAAAGG+TGG | + | Chr7:78089685-78089704 | None:intergenic | 40.0% | |
| TACTGCTATGTTTAGGAGGA+AGG | - | Chr7:78089743-78089762 | MsG0780040472.01.T01:intron | 40.0% | |
| TCTCGATGTTGTTCGTAAAG+AGG | - | Chr7:78088073-78088092 | MsG0780040472.01.T01:intron | 40.0% | |
| TGAGTTACCAATAAAGGTGG+AGG | + | Chr7:78089682-78089701 | None:intergenic | 40.0% | |
| TGGTAACTCAACCTCAATTC+AGG | - | Chr7:78089692-78089711 | MsG0780040472.01.T01:exon | 40.0% | |
| ! | ACCAGATCGGTTCAAAATTC+TGG | - | Chr7:78087766-78087785 | MsG0780040472.01.T01:CDS | 40.0% |
| ! | CCAGATCGGTTCAAAATTCT+GGG | - | Chr7:78087767-78087786 | MsG0780040472.01.T01:CDS | 40.0% |
| ! | TTGTGATTGTTTGCTGCAGT+TGG | - | Chr7:78089237-78089256 | MsG0780040472.01.T01:intron | 40.0% |
| !! | GGTTTCAGGTGTCATTCATT+GGG | - | Chr7:78088206-78088225 | MsG0780040472.01.T01:intron | 40.0% |
| !!! | ACGAGTTTTGGATGGGAAAA+TGG | + | Chr7:78087576-78087595 | None:intergenic | 40.0% |
| AGCAGCACACATCATGTTCT+TGG | + | Chr7:78089478-78089497 | None:intergenic | 45.0% | |
| AGTATCAGAACCTTCGGTGA+AGG | + | Chr7:78088323-78088342 | None:intergenic | 45.0% | |
| CACTTCTCATCACAAAGCGA+GGG | - | Chr7:78087496-78087515 | MsG0780040472.01.T01:CDS | 45.0% | |
| CATTTGCTCATCCACCTCTT+TGG | + | Chr7:78089559-78089578 | None:intergenic | 45.0% | |
| CGAAGACGAAGTTATCAGGA+CGG | + | Chr7:78087983-78088002 | None:intergenic | 45.0% | |
| CGTCCTGATAACTTCGTCTT+CGG | - | Chr7:78087981-78088000 | MsG0780040472.01.T01:CDS | 45.0% | |
| GTCAACTCAACTCTGATCTC+CGG | - | Chr7:78089320-78089339 | MsG0780040472.01.T01:intron | 45.0% | |
| TAAGATGAGCACCAAAGAGG+TGG | - | Chr7:78089545-78089564 | MsG0780040472.01.T01:CDS | 45.0% | |
| TCACTTCTCATCACAAAGCG+AGG | - | Chr7:78087495-78087514 | MsG0780040472.01.T01:CDS | 45.0% | |
| TCATGGTTGCTGAGATCAAG+TGG | + | Chr7:78089272-78089291 | None:intergenic | 45.0% | |
| TGACCGAAGACGAAGTTATC+AGG | + | Chr7:78087987-78088006 | None:intergenic | 45.0% | |
| TGAGATTCACAGCCAGTTTC+CGG | + | Chr7:78089342-78089361 | None:intergenic | 45.0% | |
| TGAGTTTCCGACGTATCTTC+CGG | + | Chr7:78087826-78087845 | None:intergenic | 45.0% | |
| TGGATGGGAAAATGGTTGAG+CGG | + | Chr7:78087568-78087587 | None:intergenic | 45.0% | |
| TGGCAAACAGCATCAACTAC+AGG | + | Chr7:78089205-78089224 | None:intergenic | 45.0% | |
| TGGGATCCACTCAACAAAGT+AGG | + | Chr7:78089607-78089626 | None:intergenic | 45.0% | |
| TTGATCTCAGCAACCATGAG+TGG | - | Chr7:78089273-78089292 | MsG0780040472.01.T01:intron | 45.0% | |
| ! | CCCAGAATTTTGAACCGATC+TGG | + | Chr7:78087770-78087789 | None:intergenic | 45.0% |
| ! | GCTTTCTTGCATTGGTACAC+TGG | - | Chr7:78089765-78089784 | MsG0780040472.01.T01:intron | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | - | Chr7:78089771-78089790 | MsG0780040472.01.T01:intron | 45.0% |
| !! | GAGATCAGAGTTGAGTTGAC+CGG | + | Chr7:78089320-78089339 | None:intergenic | 45.0% |
| !! | GGGTTTCAGGTGTCATTCAT+TGG | - | Chr7:78088205-78088224 | MsG0780040472.01.T01:intron | 45.0% |
| !! | TGACTTGCTGTCTTCGTTTC+CGG | - | Chr7:78089298-78089317 | MsG0780040472.01.T01:intron | 45.0% |
| !! | TTCAGGTGTCATTCATTGGG+AGG | - | Chr7:78088209-78088228 | MsG0780040472.01.T01:intron | 45.0% |
| !!! | GAGAGTGACGAGTTTTGGAT+GGG | + | Chr7:78087583-78087602 | None:intergenic | 45.0% |
| AACTTCGTCTTCGGTCAGTC+CGG | - | Chr7:78087990-78088009 | MsG0780040472.01.T01:CDS | 50.0% | |
| ACAATGGACAGTGTTCGCAC+TGG | - | Chr7:78087939-78087958 | MsG0780040472.01.T01:CDS | 50.0% | |
| ACAGCAAGTCACTCCACTCA+TGG | + | Chr7:78089289-78089308 | None:intergenic | 50.0% | |
| ACCAATAAAGGTGGAGGCCA+TGG | + | Chr7:78089676-78089695 | None:intergenic | 50.0% | |
| ACTGCTTCTGCCATGTTCAG+GGG | - | Chr7:78089522-78089541 | MsG0780040472.01.T01:CDS | 50.0% | |
| AGAACTCACCCAGCAGATGT+GGG | - | Chr7:78089449-78089468 | MsG0780040472.01.T01:CDS | 50.0% | |
| AGGAGGAACTGGATCTGGAA+TGG | - | Chr7:78088229-78088248 | MsG0780040472.01.T01:intron | 50.0% | |
| ATATGAGGACGAAGAGGACG+AGG | - | Chr7:78089892-78089911 | MsG0780040472.01.T01:five_prime_UTR | 50.0% | |
| CAACTCTGATCTCCGGAAAC+TGG | - | Chr7:78089327-78089346 | MsG0780040472.01.T01:CDS | 50.0% | |
| CACTGCTTCTGCCATGTTCA+GGG | - | Chr7:78089521-78089540 | MsG0780040472.01.T01:CDS | 50.0% | |
| CATTCATTGGGAGGAGGAAC+TGG | - | Chr7:78088218-78088237 | MsG0780040472.01.T01:intron | 50.0% | |
| CGAACACTGTCCATTGTACC+AGG | + | Chr7:78087936-78087955 | None:intergenic | 50.0% | |
| CGTCTGCACTTCTTCATGGT+CGG | - | Chr7:78089373-78089392 | MsG0780040472.01.T01:CDS | 50.0% | |
| CTTGGAATCCCACATCTGCT+GGG | + | Chr7:78089460-78089479 | None:intergenic | 50.0% | |
| GAGGACAATGCGAACCAGAT+CGG | - | Chr7:78087753-78087772 | MsG0780040472.01.T01:CDS | 50.0% | |
| GATCCAACCGGAAGATACGT+CGG | - | Chr7:78087816-78087835 | MsG0780040472.01.T01:CDS | 50.0% | |
| GCTCATCTTACCCCTGAACA+TGG | + | Chr7:78089535-78089554 | None:intergenic | 50.0% | |
| GGAGGAAGGCTTTCTTGCAT+TGG | - | Chr7:78089757-78089776 | MsG0780040472.01.T01:intron | 50.0% | |
| GGATGGGAAAATGGTTGAGC+GGG | + | Chr7:78087567-78087586 | None:intergenic | 50.0% | |
| GGGTAAGATGAGCACCAAAG+AGG | - | Chr7:78089542-78089561 | MsG0780040472.01.T01:CDS | 50.0% | |
| GTTTGTGACATTGCTCCTCG+AGG | - | Chr7:78089645-78089664 | MsG0780040472.01.T01:CDS | 50.0% | |
| TACTACAACGAAGCCTCCTG+TGG | - | Chr7:78087873-78087892 | MsG0780040472.01.T01:CDS | 50.0% | |
| TCACTGCTTCTGCCATGTTC+AGG | - | Chr7:78089520-78089539 | MsG0780040472.01.T01:CDS | 50.0% | |
| TCCATGGCCTCCACCTTTAT+TGG | - | Chr7:78089672-78089691 | MsG0780040472.01.T01:CDS | 50.0% | |
| TCCTTTCGCCCAATTGGTAC+CGG | + | Chr7:78088018-78088037 | None:intergenic | 50.0% | |
| TCTTGGAATCCCACATCTGC+TGG | + | Chr7:78089461-78089480 | None:intergenic | 50.0% | |
| TGAACATGGCAGAAGCAGTG+AGG | + | Chr7:78089521-78089540 | None:intergenic | 50.0% | |
| TGGAACAAACCTTCCACAGG+AGG | + | Chr7:78087889-78087908 | None:intergenic | 50.0% | |
| TTGGTACACTGGTGAAGGCA+TGG | - | Chr7:78089776-78089795 | MsG0780040472.01.T01:intron | 50.0% | |
| TTTCCGACGTATCTTCCGGT+TGG | + | Chr7:78087822-78087841 | None:intergenic | 50.0% | |
| ! | AAGAAGTGCAGACGAGGGAA+TGG | + | Chr7:78089367-78089386 | None:intergenic | 50.0% |
| ! | ACCATGAAGAAGTGCAGACG+AGG | + | Chr7:78089373-78089392 | None:intergenic | 50.0% |
| ! | AGAAGTGCAGACGAGGGAAT+GGG | + | Chr7:78089366-78089385 | None:intergenic | 50.0% |
| ! | AGTGTTCGCACTGGTCCTTA+CGG | - | Chr7:78087948-78087967 | MsG0780040472.01.T01:CDS | 50.0% |
| ! | CCATGAAGAAGTGCAGACGA+GGG | + | Chr7:78089372-78089391 | None:intergenic | 50.0% |
| ! | GAAGTAGTTTGCGACGAGCA+CGG | - | Chr7:78087789-78087808 | MsG0780040472.01.T01:CDS | 50.0% |
| ! | GGAGGAACTGGATCTGGAAT+GGG | - | Chr7:78088230-78088249 | MsG0780040472.01.T01:intron | 50.0% |
| ! | GTGAGGAGAGTGACGAGTTT+TGG | + | Chr7:78087588-78087607 | None:intergenic | 50.0% |
| ! | TGATGTGTGCTGCTGATCCT+AGG | - | Chr7:78089484-78089503 | MsG0780040472.01.T01:CDS | 50.0% |
| ! | TGGTGAAGGCATGGATGAGA+TGG | - | Chr7:78089785-78089804 | MsG0780040472.01.T01:intron | 50.0% |
| !! | AGGTGTCATTCATTGGGAGG+AGG | - | Chr7:78088212-78088231 | MsG0780040472.01.T01:intron | 50.0% |
| !! | TTCGGTGTTTCCTTCACCGA+AGG | - | Chr7:78088310-78088329 | MsG0780040472.01.T01:intron | 50.0% |
| !!! | GGAGAGTGACGAGTTTTGGA+TGG | + | Chr7:78087584-78087603 | None:intergenic | 50.0% |
| ACAACGAAGCCTCCTGTGGA+AGG | - | Chr7:78087877-78087896 | MsG0780040472.01.T01:CDS | 55.0% | |
| ACTGCTGGTACTCAGACACG+AGG | + | Chr7:78089842-78089861 | None:intergenic | 55.0% | |
| AGGCTCCAAGTCCATGAGGA+TGG | + | Chr7:78087916-78087935 | None:intergenic | 55.0% | |
| ATCCTCATGGACTTGGAGCC+TGG | - | Chr7:78087915-78087934 | MsG0780040472.01.T01:CDS | 55.0% | |
| CACATCTGCTGGGTGAGTTC+TGG | + | Chr7:78089450-78089469 | None:intergenic | 55.0% | |
| CACGTATTGCTGAGAGCCAC+GGG | + | Chr7:78089416-78089435 | None:intergenic | 55.0% | |
| CAGAACTCACCCAGCAGATG+TGG | - | Chr7:78089448-78089467 | MsG0780040472.01.T01:CDS | 55.0% | |
| CCCTCGTCTGCACTTCTTCA+TGG | - | Chr7:78089369-78089388 | MsG0780040472.01.T01:CDS | 55.0% | |
| CTTCATCAGCAGTGGCATCC+TGG | + | Chr7:78089866-78089885 | None:intergenic | 55.0% | |
| GAGCACGGCATAGATCCAAC+CGG | - | Chr7:78087804-78087823 | MsG0780040472.01.T01:CDS | 55.0% | |
| GCACGTATTGCTGAGAGCCA+CGG | + | Chr7:78089417-78089436 | None:intergenic | 55.0% | |
| GCGTGGAACAAACCTTCCAC+AGG | + | Chr7:78087892-78087911 | None:intergenic | 55.0% | |
| GGACGGAAGATCTGACCGTA+AGG | + | Chr7:78087966-78087985 | None:intergenic | 55.0% | |
| GGACTTGGAGCCTGGTACAA+TGG | - | Chr7:78087923-78087942 | MsG0780040472.01.T01:CDS | 55.0% | |
| GTCTGAGTACCAGCAGTACC+AGG | - | Chr7:78089845-78089864 | MsG0780040472.01.T01:five_prime_UTR | 55.0% | |
| TACCAGGCTCCAAGTCCATG+AGG | + | Chr7:78087920-78087939 | None:intergenic | 55.0% | |
| TTGGGAGGAGGAACTGGATC+TGG | - | Chr7:78088224-78088243 | MsG0780040472.01.T01:intron | 55.0% | |
| TTTGCTCCTCTCACATCCCG+TGG | - | Chr7:78089397-78089416 | MsG0780040472.01.T01:CDS | 55.0% | |
| ! | TGTGCTGCTGATCCTAGGCA+TGG | - | Chr7:78089489-78089508 | MsG0780040472.01.T01:CDS | 55.0% |
| AAGTCCATGAGGATGGCGCG+TGG | + | Chr7:78087909-78087928 | None:intergenic | 60.0% | |
| ACGCGCCATCCTCATGGACT+TGG | - | Chr7:78087908-78087927 | MsG0780040472.01.T01:CDS | 60.0% | |
| CAGTGGCATCCTGGTACTGC+TGG | + | Chr7:78089857-78089876 | None:intergenic | 60.0% | |
| GCCGGTACCAATTGGGCGAA+AGG | - | Chr7:78088014-78088033 | MsG0780040472.01.T01:intron | 60.0% | |
| GTGAGGTAGCGACCATGCCT+AGG | + | Chr7:78089504-78089523 | None:intergenic | 60.0% | |
| TGAGAGCCACGGGATGTGAG+AGG | + | Chr7:78089406-78089425 | None:intergenic | 60.0% | |
| TGCTCCTCGAGGTCTCTCCA+TGG | - | Chr7:78089656-78089675 | MsG0780040472.01.T01:CDS | 60.0% | |
| TGTTCCACGCGCCATCCTCA+TGG | - | Chr7:78087902-78087921 | MsG0780040472.01.T01:CDS | 60.0% | |
| !! | AGTCCGGTGCCGGTACCAAT+TGG | - | Chr7:78088006-78088025 | MsG0780040472.01.T01:intron | 60.0% |
| !! | GTCCGGTGCCGGTACCAATT+GGG | - | Chr7:78088007-78088026 | MsG0780040472.01.T01:intron | 60.0% |
| GAGGCCATGGAGAGACCTCG+AGG | + | Chr7:78089663-78089682 | None:intergenic | 65.0% | |
| GTCTTCGGTCAGTCCGGTGC+CGG | - | Chr7:78087996-78088015 | MsG0780040472.01.T01:CDS | 65.0% | |
| !! | CGCCCAATTGGTACCGGCAC+CGG | + | Chr7:78088012-78088031 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 78087492 | 78089950 | 78087492 | ID=MsG0780040472.01;Name=MsG0780040472.01 |
| Chr7 | mRNA | 78087492 | 78089950 | 78087492 | ID=MsG0780040472.01.T01;Parent=MsG0780040472.01;Name=MsG0780040472.01.T01;_AED=0.32;_eAED=0.35;_QI=178|0.5|0.66|1|0.5|0.33|3|0|299 |
| Chr7 | exon | 78087492 | 78088015 | 78087492 | ID=MsG0780040472.01.T01:exon:15539;Parent=MsG0780040472.01.T01 |
| Chr7 | exon | 78089323 | 78089739 | 78089323 | ID=MsG0780040472.01.T01:exon:15538;Parent=MsG0780040472.01.T01 |
| Chr7 | exon | 78089814 | 78089950 | 78089814 | ID=MsG0780040472.01.T01:exon:15537;Parent=MsG0780040472.01.T01 |
| Chr7 | five_prime_UTR | 78089814 | 78089950 | 78089814 | ID=MsG0780040472.01.T01:five_prime_utr;Parent=MsG0780040472.01.T01 |
| Chr7 | five_prime_UTR | 78089699 | 78089739 | 78089699 | ID=MsG0780040472.01.T01:five_prime_utr;Parent=MsG0780040472.01.T01 |
| Chr7 | CDS | 78089323 | 78089698 | 78089323 | ID=MsG0780040472.01.T01:cds;Parent=MsG0780040472.01.T01 |
| Chr7 | CDS | 78087492 | 78088015 | 78087492 | ID=MsG0780040472.01.T01:cds;Parent=MsG0780040472.01.T01 |
| Gene Sequence |
| Protein sequence |
