AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047249.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047249.01.T01 MTR_4g123910 98.913 184 2 0 149 332 86 269 1.73e-130 373
MsG0880047249.01.T01 MTR_4g123910 98.876 89 1 0 1 89 1 89 1.75e-57 187
MsG0880047249.01.T01 MTR_2g045960 91.573 178 15 0 151 328 88 265 1.77e-108 317
MsG0880047249.01.T01 MTR_2g045960 82.022 89 16 0 1 89 1 89 2.50e-45 155
MsG0880047249.01.T01 MTR_4g099140 67.614 176 52 2 151 324 88 260 6.88e-70 219
MsG0880047249.01.T01 MTR_4g099140 56.627 83 36 0 7 89 7 89 7.72e-22 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047249.01.T01 AT1G48240 84.916 179 26 1 149 326 35 213 2.30e-100 295
MsG0880047249.01.T01 AT1G48240 85.876 177 24 1 151 326 88 264 7.73e-100 295
MsG0880047249.01.T01 AT3G17440 84.831 178 26 1 151 327 88 265 1.33e-98 292
MsG0880047249.01.T01 AT3G17440 82.022 89 16 0 1 89 1 89 2.04e-44 153
MsG0880047249.01.T01 AT2G35190 68.539 178 49 3 151 324 88 262 1.62e-67 213
MsG0880047249.01.T01 AT2G35190 67.470 83 27 0 7 89 7 89 1.69e-30 117
MsG0880047249.01.T01 AT3G17440 84.800 125 18 1 151 274 88 212 2.12e-67 211
MsG0880047249.01.T01 AT3G17440 82.022 89 16 0 1 89 1 89 2.14e-45 154

Find 102 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTAACAATCCAAATATTT+AGG 0.090500 8:-83771580 MsG0880047249.01.T01:three_prime_UTR
TCTCTCTAGCCCTAAATATT+TGG 0.162380 8:+83771570 None:intergenic
AATATTAGAGGATTGCTTTC+TGG 0.171816 8:-83771726 MsG0880047249.01.T01:three_prime_UTR
GAATGAATGTGTTTGAAAAT+TGG 0.232521 8:+83776686 None:intergenic
CTTTAATCTTATCCAGCTTC+TGG 0.274677 8:+83775425 None:intergenic
AACTCGTTACACGGAGAAAA+AGG 0.277213 8:+83774524 None:intergenic
AAGTTGCTTGTTCACTTCTT+CGG 0.281034 8:+83774684 None:intergenic
ATCCCAACAACAAAGATATT+AGG 0.293546 8:-83771891 MsG0880047249.01.T01:CDS
TGTAACAATCCAAATATTTA+GGG 0.294643 8:-83771579 MsG0880047249.01.T01:three_prime_UTR
AGTTGCTTGTTCACTTCTTC+GGG 0.308311 8:+83774685 None:intergenic
ATGGTGATCACTTAATTTGA+TGG 0.329560 8:+83774477 None:intergenic
TTTGCAGTCCCTCATCTTCC+CGG 0.331240 8:+83775366 None:intergenic
CAGCTGAGTACTTTGTCTAT+TGG 0.333441 8:+83775399 None:intergenic
CCTTCAAGGTAGAAGCAGTT+TGG 0.343816 8:+83772590 None:intergenic
GATGAGAGAGGGAGCATTAG+TGG 0.345520 8:+83776623 None:intergenic
TCCCAACAACAAAGATATTA+GGG 0.359712 8:-83771890 MsG0880047249.01.T01:CDS
CTTCAAGGTAGAAGCAGTTT+GGG 0.360070 8:+83772591 None:intergenic
TCATACCTTCACAACAATAA+TGG 0.371962 8:+83772235 None:intergenic
ATCCCTAATATCTTTGTTGT+TGG 0.373848 8:+83771888 None:intergenic
CAAACTTACTTGGCCCTTCA+AGG 0.377735 8:+83772576 None:intergenic
TCTTATCGATCGAATATTAG+AGG 0.380556 8:-83771738 MsG0880047249.01.T01:three_prime_UTR
CCAAACTGCTTCTACCTTGA+AGG 0.383146 8:-83772590 MsG0880047249.01.T01:CDS
TCCCTAATATCTTTGTTGTT+GGG 0.383563 8:+83771889 None:intergenic
TCCCAACTTGTTAAGGAGAT+TGG 0.395927 8:-83772408 MsG0880047249.01.T01:CDS
CTACTTGTACTTGAAATTTG+TGG 0.402605 8:-83771537 MsG0880047249.01.T01:three_prime_UTR
TTTGAAACTATTTGTTGAAT+CGG 0.407231 8:-83771441 MsG0880047249.01.T01:three_prime_UTR
AAAAGCCTCCTTGAGGGAAC+TGG 0.407527 8:+83771847 None:intergenic
GAAGGCCTCCCAACTTGTTA+AGG 0.410294 8:-83772415 MsG0880047249.01.T01:CDS
AAAGATATTAGGGATATTCC+AGG 0.415143 8:-83771880 MsG0880047249.01.T01:CDS
CAATTCTAGTCCTGCCAACT+TGG 0.415915 8:-83771768 MsG0880047249.01.T01:three_prime_UTR
AATCATGCAGACTGAACAAA+TGG 0.425940 8:-83772481 MsG0880047249.01.T01:intron
AATCAAGAACTCGTCAATGC+TGG 0.428904 8:-83772763 MsG0880047249.01.T01:CDS
CAACAACACAACACAACTTA+GGG 0.428999 8:-83776601 MsG0880047249.01.T01:five_prime_UTR
GGAACTGGAGGCGCCAATCC+TGG 0.433221 8:+83771862 None:intergenic
TGTTAAGGAGATTGGTAGAC+AGG 0.437254 8:-83772400 MsG0880047249.01.T01:intron
TCAACAACACAACACAACTT+AGG 0.439731 8:-83776602 MsG0880047249.01.T01:five_prime_UTR
TCAAGATCCTCCTTGTATTG+TGG 0.447676 8:-83774564 MsG0880047249.01.T01:CDS
ACCAATCTCCTTAACAAGTT+GGG 0.449301 8:+83772407 None:intergenic
CAGAAATGGCTTCCAGAAGC+TGG 0.449482 8:-83775437 MsG0880047249.01.T01:CDS
TGCCAATTGAACATTTCCTT+CGG 0.451709 8:+83773909 None:intergenic
CATGGATCTGTTCGAGCTGA+GGG 0.453043 8:+83776489 None:intergenic
AGCCGAAGGAAATGTTCAAT+TGG 0.469264 8:-83773911 MsG0880047249.01.T01:CDS
GATCGTGAAATTAAAGATGA+AGG 0.472497 8:-83774718 MsG0880047249.01.T01:CDS
GGAAATGTTCAATTGGCATC+AGG 0.483291 8:-83773904 MsG0880047249.01.T01:intron
TACCAATCTCCTTAACAAGT+TGG 0.487013 8:+83772406 None:intergenic
TATTAGGGATATTCCAGGAT+TGG 0.491096 8:-83771875 MsG0880047249.01.T01:CDS
CAAATTAAGTGATCACCATA+TGG 0.496478 8:-83774473 MsG0880047249.01.T01:intron
CAATAGACAAAGTACTCAGC+TGG 0.497315 8:-83775398 MsG0880047249.01.T01:CDS
ACACAACGGAACGCAGAAGT+TGG 0.500757 8:+83776777 None:intergenic
TGTTGTGTTGTTGATGAGAG+AGG 0.505776 8:+83776611 None:intergenic
GTACATCAAACAATTGAAGT+TGG 0.510767 8:-83772616 MsG0880047249.01.T01:CDS
AATCAAGCTCATTAACAATA+CGG 0.513503 8:+83772457 None:intergenic
GGAAGATGAGGGACTGCAAA+AGG 0.516525 8:-83775363 MsG0880047249.01.T01:intron
ATCAAGAACTCGTCAATGCT+GGG 0.517025 8:-83772762 MsG0880047249.01.T01:CDS
CATCTTCAAGTTGGAAGCCA+TGG 0.518612 8:+83776514 None:intergenic
AACTCAATCTCCCGCATCCA+TGG 0.519687 8:-83776531 MsG0880047249.01.T01:exon
ACTCAGCTGGAGGAACTCAC+CGG 0.523198 8:-83775385 MsG0880047249.01.T01:CDS
GAAATTAAAGATGAAGGTGC+AGG 0.526092 8:-83774712 MsG0880047249.01.T01:CDS
GGCTATTGAGAGATCTAAGC+AGG 0.527773 8:-83772713 MsG0880047249.01.T01:intron
CTGAGGGGTCATCTTCAAGT+TGG 0.529082 8:+83776505 None:intergenic
CCATGGATCTGTTCGAGCTG+AGG 0.533024 8:+83776488 None:intergenic
GAGTTTAACCCTCAAAATCC+CGG 0.534542 8:+83776549 None:intergenic
TTGTTGTTAATTGAGAAGAA+AGG 0.541556 8:+83776650 None:intergenic
ACGTACAAAAGCCTCCTTGA+GGG 0.543026 8:+83771841 None:intergenic
TTTCTGTTTCTTATCGTCTG+TGG 0.544072 8:-83772266 MsG0880047249.01.T01:CDS
CAAGTTGGAAGCCATGGATG+CGG 0.544349 8:+83776520 None:intergenic
AAGTTGGAAGCCATGGATGC+GGG 0.545305 8:+83776521 None:intergenic
AGAACAAGAACCAAGTTGGC+AGG 0.550428 8:+83771758 None:intergenic
AACAGGTACATGAATACGAT+TGG 0.551437 8:-83773985 MsG0880047249.01.T01:intron
AAGATGCATACGCGAGGGCA+CGG 0.552215 8:+83776447 None:intergenic
GATTGCCATTATTGTTGTGA+AGG 0.552231 8:-83772240 MsG0880047249.01.T01:intron
GCTTAGATCTCTCAATAGCC+TGG 0.553529 8:+83772716 None:intergenic
GTTGTGTTGTTGATGAGAGA+GGG 0.555925 8:+83776612 None:intergenic
GATAAGAACAAGAACCAAGT+TGG 0.563410 8:+83771754 None:intergenic
GAGTGTCAATCCACAATACA+AGG 0.566778 8:+83774554 None:intergenic
CAAACTGCTTCTACCTTGAA+GGG 0.570444 8:-83772589 MsG0880047249.01.T01:CDS
AGGAACTCACCGGGAAGATG+AGG 0.575887 8:-83775375 MsG0880047249.01.T01:CDS
ATTAGAGGATTGCTTTCTGG+AGG 0.581140 8:-83771723 MsG0880047249.01.T01:three_prime_UTR
TGGCGCCTCCAGTTCCCTCA+AGG 0.584416 8:-83771855 MsG0880047249.01.T01:CDS
CGCCTCCAGTTCCCTCAAGG+AGG 0.588015 8:-83771852 MsG0880047249.01.T01:CDS
ATTAAGAGACGTGGCACTCG+AGG 0.588508 8:+83771601 None:intergenic
CAAGGAGCTAAACTCATATG+TGG 0.596320 8:-83774261 MsG0880047249.01.T01:CDS
GGAACTCACCGGGAAGATGA+GGG 0.597027 8:-83775374 MsG0880047249.01.T01:CDS
AGCCTCCTTGAGGGAACTGG+AGG 0.604127 8:+83771850 None:intergenic
CCTCAGCTCGAACAGATCCA+TGG 0.604752 8:-83776488 MsG0880047249.01.T01:CDS
CTCAGCTGGAGGAACTCACC+GGG 0.605565 8:-83775384 MsG0880047249.01.T01:CDS
TGTAAATGTGTCTAATTCAG+AGG 0.607175 8:-83771514 MsG0880047249.01.T01:three_prime_UTR
ATCATGCAGACTGAACAAAT+GGG 0.622906 8:-83772480 MsG0880047249.01.T01:intron
GCAAGTGAATCTACAGCCGA+AGG 0.626899 8:-83773925 MsG0880047249.01.T01:CDS
ATTCTTTATAACTCGTTACA+CGG 0.629683 8:+83774515 None:intergenic
GACAATGGATGAGACTGACC+AGG 0.634633 8:-83772734 MsG0880047249.01.T01:CDS
AATCTCCTTAACAAGTTGGG+AGG 0.641193 8:+83772410 None:intergenic
CAGAAGTTGGACATGTGCTG+TGG 0.658857 8:+83776790 None:intergenic
CAATGCTGGGATGAAGACAA+TGG 0.660556 8:-83772749 MsG0880047249.01.T01:CDS
TAGACAAAGTACTCAGCTGG+AGG 0.671294 8:-83775395 MsG0880047249.01.T01:CDS
ACCCTTTCAAAACTTTGACG+AGG 0.677806 8:+83774587 None:intergenic
GATTGTTACATTAAGAGACG+TGG 0.682955 8:+83771592 None:intergenic
ACAGCACGACACAAACACAA+CGG 0.684691 8:+83776763 None:intergenic
TACGTACAAAAGCCTCCTTG+AGG 0.702572 8:+83771840 None:intergenic
ATGGATCTGTTCGAGCTGAG+GGG 0.705029 8:+83776490 None:intergenic
AGATGTCACGAATTTCACCA+TGG 0.723900 8:+83776471 None:intergenic
TGTCAATCCACAATACAAGG+AGG 0.747227 8:+83774557 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAACTTCTATTTTATATA+AGG + Chr8:83774193-83774212 None:intergenic 10.0%
!! ATAAAATTATTAGAGCAAAT+TGG + Chr8:83776104-83776123 None:intergenic 15.0%
!! ATATATATATACAAACACAA+TGG + Chr8:83773830-83773849 None:intergenic 15.0%
!! GATTTGATTAATAATAATGT+GGG - Chr8:83773230-83773249 MsG0880047249.01.T01:intron 15.0%
!! TCATAATCAAAATTCTATAA+TGG - Chr8:83773180-83773199 MsG0880047249.01.T01:intron 15.0%
!!! AAATAGAAGTTTTATTCTTT+TGG - Chr8:83774199-83774218 MsG0880047249.01.T01:intron 15.0%
!!! AAATTTGATAGTTGTTTTTT+GGG - Chr8:83773294-83773313 MsG0880047249.01.T01:intron 15.0%
!!! CTTAGATTTAAAATTCAAAA+CGG - Chr8:83774860-83774879 MsG0880047249.01.T01:intron 15.0%
!!! TAAATTTGATAGTTGTTTTT+TGG - Chr8:83773293-83773312 MsG0880047249.01.T01:intron 15.0%
!!! TCAACTATTTTAAATAACTT+TGG - Chr8:83776141-83776160 MsG0880047249.01.T01:intron 15.0%
!!! TCTTTTTTATAACTCTTTTA+AGG + Chr8:83774999-83775018 None:intergenic 15.0%
!!! TTAGATTTAAAATTCAAAAC+GGG - Chr8:83774861-83774880 MsG0880047249.01.T01:intron 15.0%
!!! TTTCTCATGTTATTTATTTT+GGG - Chr8:83775167-83775186 MsG0880047249.01.T01:intron 15.0%
!!! TTTTCTCATGTTATTTATTT+TGG - Chr8:83775166-83775185 MsG0880047249.01.T01:intron 15.0%
!!! TTTTGAATTTTAAATCTAAG+AGG + Chr8:83774860-83774879 None:intergenic 15.0%
!! AATCTGCAAAAATACATTAT+CGG + Chr8:83776331-83776350 None:intergenic 20.0%
!! AGAGAATATATCAACAAATT+AGG + Chr8:83776068-83776087 None:intergenic 20.0%
!! ATATACTACACATCAAAAAT+AGG + Chr8:83776773-83776792 None:intergenic 20.0%
!! ATGTAACAATCCAAATATTT+AGG - Chr8:83776666-83776685 MsG0880047249.01.T01:five_prime_UTR 20.0%
!! ATTTAGTAGTGAAAAACTAA+AGG + Chr8:83773159-83773178 None:intergenic 20.0%
!! CATTATTATTAATCAAATCC+TGG + Chr8:83773229-83773248 None:intergenic 20.0%
!! CTAAAATATTCTATATAGAG+CGG + Chr8:83773268-83773287 None:intergenic 20.0%
!! GGATTTGATTAATAATAATG+TGG - Chr8:83773229-83773248 MsG0880047249.01.T01:intron 20.0%
!! TAAAATAAGATAAATGGTGT+GGG + Chr8:83775590-83775609 None:intergenic 20.0%
!! TAAAATATTCTATATAGAGC+GGG + Chr8:83773267-83773286 None:intergenic 20.0%
!! TAAGAACTTATATGCTTATA+AGG + Chr8:83772680-83772699 None:intergenic 20.0%
!! TATACTACACATCAAAAATA+GGG + Chr8:83776772-83776791 None:intergenic 20.0%
!! TGAAAAAAGAAAGAATTAAC+TGG + Chr8:83776565-83776584 None:intergenic 20.0%
!! TGATATATAAATCAACAAGT+TGG - Chr8:83772089-83772108 MsG0880047249.01.T01:intron 20.0%
!! TGTAACAATCCAAATATTTA+GGG - Chr8:83776667-83776686 MsG0880047249.01.T01:five_prime_UTR 20.0%
!! TTAAAATAAGATAAATGGTG+TGG + Chr8:83775591-83775610 None:intergenic 20.0%
!!! AAATTCATTTTTTTCTTTGC+CGG - Chr8:83771678-83771697 MsG0880047249.01.T01:three_prime_UTR 20.0%
!!! AATTCAGTTTTCAATAAAGA+AGG - Chr8:83775813-83775832 MsG0880047249.01.T01:intron 20.0%
!!! ATACATTTCATGATTTCTTT+TGG - Chr8:83773433-83773452 MsG0880047249.01.T01:intron 20.0%
!!! ATTTTTTCAAACATCAATGT+CGG - Chr8:83773376-83773395 MsG0880047249.01.T01:intron 20.0%
!!! GCAAAGAAAAAAATGAATTT+TGG + Chr8:83771678-83771697 None:intergenic 20.0%
!!! TGTTTTAATTAAGAAGTGAT+AGG + Chr8:83772630-83772649 None:intergenic 20.0%
!!! TTAGATTTGAAATTCAAAAC+AGG + Chr8:83775045-83775064 None:intergenic 20.0%
!!! TTTCTTTTGGAATTTGTTAA+TGG - Chr8:83773446-83773465 MsG0880047249.01.T01:intron 20.0%
!!! TTTGAAACTATTTGTTGAAT+CGG - Chr8:83776805-83776824 MsG0880047249.01.T01:five_prime_UTR 20.0%
!!! TTTTGAATTTCAAATCTAAG+AGG - Chr8:83775046-83775065 MsG0880047249.01.T01:intron 20.0%
! AAAATATTCTATATAGAGCG+GGG + Chr8:83773266-83773285 None:intergenic 25.0%
! AACATGACCAAGAAAAAAAA+AGG + Chr8:83773623-83773642 None:intergenic 25.0%
! AATCAAGCTCATTAACAATA+CGG + Chr8:83775792-83775811 None:intergenic 25.0%
! ACATGACCAAGAAAAAAAAA+GGG + Chr8:83773622-83773641 None:intergenic 25.0%
! ATACTACACATCAAAAATAG+GGG + Chr8:83776771-83776790 None:intergenic 25.0%
! ATATTTAGTGGTAAACAAAG+GGG + Chr8:83772987-83773006 None:intergenic 25.0%
! ATTATTAATCAAATCCTGGA+AGG + Chr8:83773225-83773244 None:intergenic 25.0%
! ATTCTACAACAGAAATATAG+TGG + Chr8:83775289-83775308 None:intergenic 25.0%
! ATTCTTTATAACTCGTTACA+CGG + Chr8:83773734-83773753 None:intergenic 25.0%
! CAATTCAAATCAAACTTACT+TGG + Chr8:83775683-83775702 None:intergenic 25.0%
! CACTAAATATCATAAACAAG+AGG - Chr8:83772997-83773016 MsG0880047249.01.T01:intron 25.0%
! CAGGGTTAAAATAAGATAAA+TGG + Chr8:83775596-83775615 None:intergenic 25.0%
! GAATGAATGTGTTTGAAAAT+TGG + Chr8:83771563-83771582 None:intergenic 25.0%
! GATATTTAGTGGTAAACAAA+GGG + Chr8:83772988-83773007 None:intergenic 25.0%
! GTTGTTATAGTTGAAAGTTT+AGG - Chr8:83772059-83772078 MsG0880047249.01.T01:intron 25.0%
! TAATGACGAAAAACAATCAA+TGG - Chr8:83773584-83773603 MsG0880047249.01.T01:intron 25.0%
! TCAATAACGACTTAAACAAT+AGG + Chr8:83772708-83772727 None:intergenic 25.0%
! TGAATGCAATATCAAAACTT+GGG + Chr8:83774646-83774665 None:intergenic 25.0%
! TGATATTTAGTGGTAAACAA+AGG + Chr8:83772989-83773008 None:intergenic 25.0%
!! AAAACTTGAACTTTTTGACA+TGG - Chr8:83774290-83774309 MsG0880047249.01.T01:intron 25.0%
!! AAACTTGAACTTTTTGACAT+GGG - Chr8:83774291-83774310 MsG0880047249.01.T01:intron 25.0%
!! AGAACGTTTTTACTTGATTA+AGG - Chr8:83772248-83772267 MsG0880047249.01.T01:CDS 25.0%
!! ATGTTTCTATTAATGTCATC+AGG - Chr8:83773490-83773509 MsG0880047249.01.T01:intron 25.0%
!! CGCTCTATATAGAATATTTT+AGG - Chr8:83773266-83773285 MsG0880047249.01.T01:intron 25.0%
!! CTCTTGTTTATGATATTTAG+TGG + Chr8:83772999-83773018 None:intergenic 25.0%
!! GAGACTAAATTTTGCTTTAT+TGG + Chr8:83774171-83774190 None:intergenic 25.0%
!! GCTTTAATTTCCTGTTTATA+TGG - Chr8:83775871-83775890 MsG0880047249.01.T01:intron 25.0%
!! GTTAATGTAGTTCAACATTT+TGG - Chr8:83772128-83772147 MsG0880047249.01.T01:intron 25.0%
!! TTGACTACACATTTTATAGA+CGG - Chr8:83773347-83773366 MsG0880047249.01.T01:intron 25.0%
!! TTGTTGTTAATTGAGAAGAA+AGG + Chr8:83771599-83771618 None:intergenic 25.0%
!!! AAACAAAGTGTTGGTATAAT+AGG + Chr8:83772431-83772450 None:intergenic 25.0%
!!! AACAAAGTGTTGGTATAATA+GGG + Chr8:83772430-83772449 None:intergenic 25.0%
!!! AATTCATTTTTTTCTTTGCC+GGG - Chr8:83771679-83771698 MsG0880047249.01.T01:three_prime_UTR 25.0%
!!! AATTTGTAAAAGCATTGATG+AGG + Chr8:83771872-83771891 None:intergenic 25.0%
!!! ATGATTTTCTCATGTTGTTT+TGG + Chr8:83774739-83774758 None:intergenic 25.0%
!!! TCATGTTGTTTTGGATTTTT+GGG + Chr8:83774730-83774749 None:intergenic 25.0%
!!! TTTTTTTTTCTTGGTCATGT+TGG - Chr8:83773622-83773641 MsG0880047249.01.T01:intron 25.0%
AAACCCAAACAAAATCTAAG+AGG - Chr8:83774944-83774963 MsG0880047249.01.T01:intron 30.0%
AAAGATATTAGGGATATTCC+AGG - Chr8:83776366-83776385 MsG0880047249.01.T01:intron 30.0%
AAATATTCGGCCAGAATATT+CGG - Chr8:83774489-83774508 MsG0880047249.01.T01:CDS 30.0%
AAGTCGTTATTGATACATGT+TGG - Chr8:83772715-83772734 MsG0880047249.01.T01:CDS 30.0%
AATATTAGAGGATTGCTTTC+TGG - Chr8:83776520-83776539 MsG0880047249.01.T01:exon 30.0%
AATTAAGAAGTGATAGGACA+TGG + Chr8:83772624-83772643 None:intergenic 30.0%
ATCCCAACAACAAAGATATT+AGG - Chr8:83776355-83776374 MsG0880047249.01.T01:intron 30.0%
ATCGTGATTATTGTTGACAT+TGG - Chr8:83771941-83771960 MsG0880047249.01.T01:intron 30.0%
ATGTCAACTACAAATTCCAT+TGG + Chr8:83775229-83775248 None:intergenic 30.0%
CAAATTAAGTGATCACCATA+TGG - Chr8:83773773-83773792 MsG0880047249.01.T01:intron 30.0%
CAAGAAAGTAAACAAAGTGT+TGG + Chr8:83772440-83772459 None:intergenic 30.0%
CACATATTCTACTTGAGAAA+AGG - Chr8:83776167-83776186 MsG0880047249.01.T01:intron 30.0%
CTACTTGTACTTGAAATTTG+TGG - Chr8:83776709-83776728 MsG0880047249.01.T01:five_prime_UTR 30.0%
GAAAAAAGTTTGAGAATACG+AGG - Chr8:83773799-83773818 MsG0880047249.01.T01:intron 30.0%
GAATTGAGTATGCTATAAGA+AGG - Chr8:83775697-83775716 MsG0880047249.01.T01:intron 30.0%
GATCGTGAAATTAAAGATGA+AGG - Chr8:83773528-83773547 MsG0880047249.01.T01:intron 30.0%
GTACATCAAACAATTGAAGT+TGG - Chr8:83775630-83775649 MsG0880047249.01.T01:intron 30.0%
GTGAATGCAATATCAAAACT+TGG + Chr8:83774647-83774666 None:intergenic 30.0%
TACAAGAATATTCACTCTGA+AGG - Chr8:83774813-83774832 MsG0880047249.01.T01:intron 30.0%
TATTTGCAATAGCATACTTC+AGG - Chr8:83775333-83775352 MsG0880047249.01.T01:intron 30.0%
TCATACCTTCACAACAATAA+TGG + Chr8:83776014-83776033 None:intergenic 30.0%
TCATTAAAGGAGTTGCAAAA+AGG + Chr8:83774911-83774930 None:intergenic 30.0%
TCCCAACAACAAAGATATTA+GGG - Chr8:83776356-83776375 MsG0880047249.01.T01:intron 30.0%
TCTTATCGATCGAATATTAG+AGG - Chr8:83776508-83776527 MsG0880047249.01.T01:CDS 30.0%
TGATAAGTATCCAAGTACAT+GGG - Chr8:83772522-83772541 MsG0880047249.01.T01:intron 30.0%
TGTAAATGTGTCTAATTCAG+AGG - Chr8:83776732-83776751 MsG0880047249.01.T01:five_prime_UTR 30.0%
TTATCAATTAGTACTAACGC+TGG + Chr8:83772508-83772527 None:intergenic 30.0%
TTATCACTTGGATGATAAAC+AGG - Chr8:83774244-83774263 MsG0880047249.01.T01:intron 30.0%
TTGATAAGTATCCAAGTACA+TGG - Chr8:83772521-83772540 MsG0880047249.01.T01:intron 30.0%
TTTAGTATCTGATTAGGTCA+TGG + Chr8:83774623-83774642 None:intergenic 30.0%
! AAAGCCTCTTAGATTTTGTT+TGG + Chr8:83774951-83774970 None:intergenic 30.0%
! AATACATTTTCTCAAGCCAA+TGG - Chr8:83775210-83775229 MsG0880047249.01.T01:intron 30.0%
! ACACTTTGTTTACTTTCTTG+TGG - Chr8:83772440-83772459 MsG0880047249.01.T01:CDS 30.0%
! ATCCCTAATATCTTTGTTGT+TGG + Chr8:83776361-83776380 None:intergenic 30.0%
! ATGGTGATCACTTAATTTGA+TGG + Chr8:83773772-83773791 None:intergenic 30.0%
! ATTCATTTTCTTGCAGATCA+AGG - Chr8:83773967-83773986 MsG0880047249.01.T01:CDS 30.0%
! CACTTTGTTTACTTTCTTGT+GGG - Chr8:83772441-83772460 MsG0880047249.01.T01:CDS 30.0%
! TCTTGATTTGACATTTCTGT+AGG + Chr8:83775471-83775490 None:intergenic 30.0%
! TGACTACACATTTTATAGAC+GGG - Chr8:83773348-83773367 MsG0880047249.01.T01:intron 30.0%
! TTTTAACCCTGTCAAAATGT+AGG - Chr8:83775605-83775624 MsG0880047249.01.T01:intron 30.0%
!! AAGCCTCTTAGATTTTGTTT+GGG + Chr8:83774950-83774969 None:intergenic 30.0%
!! GAATTTGTTAATGGCATTCT+TGG - Chr8:83773455-83773474 MsG0880047249.01.T01:intron 30.0%
!! GACGAAAATTTGATTTGAGA+GGG + Chr8:83771974-83771993 None:intergenic 30.0%
!! TACTTGATTAAGGACTAGTT+TGG - Chr8:83772258-83772277 MsG0880047249.01.T01:CDS 30.0%
!! TATTCTTTTGGCTAGTTGAA+AGG - Chr8:83774211-83774230 MsG0880047249.01.T01:intron 30.0%
!! TCCCTAATATCTTTGTTGTT+GGG + Chr8:83776360-83776379 None:intergenic 30.0%
!! TGACGAAAATTTGATTTGAG+AGG + Chr8:83771975-83771994 None:intergenic 30.0%
!!! CAAACTTTTTTCTGACCATA+TGG + Chr8:83773791-83773810 None:intergenic 30.0%
!!! CATGTTGTTTTGGATTTTTG+GGG + Chr8:83774729-83774748 None:intergenic 30.0%
!!! CTCATGTTGTTTTGGATTTT+TGG + Chr8:83774731-83774750 None:intergenic 30.0%
!!! TCAGAACCCTTTTTTTTTCT+TGG - Chr8:83773613-83773632 MsG0880047249.01.T01:intron 30.0%
AAACCACACAAAAATAGCCT+AGG + Chr8:83775396-83775415 None:intergenic 35.0%
AAAGTTTGAGAATACGAGGA+TGG - Chr8:83773803-83773822 MsG0880047249.01.T01:intron 35.0%
AACAGGTACATGAATACGAT+TGG - Chr8:83774261-83774280 MsG0880047249.01.T01:CDS 35.0%
AACGGCCCTTATATGAATAT+TGG + Chr8:83774384-83774403 None:intergenic 35.0%
AAGTTGCTTGTTCACTTCTT+CGG + Chr8:83773565-83773584 None:intergenic 35.0%
AATCATGCAGACTGAACAAA+TGG - Chr8:83775765-83775784 MsG0880047249.01.T01:intron 35.0%
ACAATAACGTCTCTAACCAT+TGG + Chr8:83773032-83773051 None:intergenic 35.0%
ACACTTACAATATGTCAACC+TGG + Chr8:83772204-83772223 None:intergenic 35.0%
ACCAATCTCCTTAACAAGTT+GGG + Chr8:83775842-83775861 None:intergenic 35.0%
ACCATGAACATGTATATCAG+TGG + Chr8:83772156-83772175 None:intergenic 35.0%
AGTTTGATGTTTGCTTCTTG+AGG - Chr8:83775113-83775132 MsG0880047249.01.T01:intron 35.0%
ATACAGCAGTCCATATAAAC+AGG + Chr8:83775884-83775903 None:intergenic 35.0%
ATCATGCAGACTGAACAAAT+GGG - Chr8:83775766-83775785 MsG0880047249.01.T01:intron 35.0%
ATTTGATGTTTGCTCCTTTG+AGG + Chr8:83774788-83774807 None:intergenic 35.0%
CAACAACACAACACAACTTA+GGG - Chr8:83771645-83771664 MsG0880047249.01.T01:three_prime_UTR 35.0%
CAATAACGTCTCTAACCATT+GGG + Chr8:83773031-83773050 None:intergenic 35.0%
CACGCTAAGCAAATCATTAA+AGG + Chr8:83774924-83774943 None:intergenic 35.0%
CTATAAGAAGGAAAGAGTCT+AGG - Chr8:83775709-83775728 MsG0880047249.01.T01:intron 35.0%
CTTGGGTTTAGTATCTGATT+AGG + Chr8:83774629-83774648 None:intergenic 35.0%
CTTTAATCTTATCCAGCTTC+TGG + Chr8:83772824-83772843 None:intergenic 35.0%
GAATATTCTGGCCGAATATT+TGG + Chr8:83774490-83774509 None:intergenic 35.0%
GACCGCCAATATTCATATAA+GGG - Chr8:83774376-83774395 MsG0880047249.01.T01:intron 35.0%
GACGAAATCCTTATTCACAA+AGG + Chr8:83775072-83775091 None:intergenic 35.0%
GATAAGAACAAGAACCAAGT+TGG + Chr8:83776495-83776514 None:intergenic 35.0%
GATAAGTATCCAAGTACATG+GGG - Chr8:83772523-83772542 MsG0880047249.01.T01:intron 35.0%
GATTGCCATTATTGTTGTGA+AGG - Chr8:83776006-83776025 MsG0880047249.01.T01:intron 35.0%
GATTGTTACATTAAGAGACG+TGG + Chr8:83776657-83776676 None:intergenic 35.0%
GCAAAAGATGATTTCACAAC+TGG + Chr8:83773073-83773092 None:intergenic 35.0%
GGTTGACATATTGTAAGTGT+AGG - Chr8:83772204-83772223 MsG0880047249.01.T01:intron 35.0%
GTGATTATTGTTGACATTGG+AGG - Chr8:83771944-83771963 MsG0880047249.01.T01:intron 35.0%
TACACATCAAAAATAGGGGA+GGG + Chr8:83776767-83776786 None:intergenic 35.0%
TACCAATCTCCTTAACAAGT+TGG + Chr8:83775843-83775862 None:intergenic 35.0%
TATTAGGGATATTCCAGGAT+TGG - Chr8:83776371-83776390 MsG0880047249.01.T01:intron 35.0%
TATTGATACATGTTGGAGTG+TGG - Chr8:83772722-83772741 MsG0880047249.01.T01:CDS 35.0%
TATTTCTTCCAAACCTGTCA+TGG - Chr8:83775901-83775920 MsG0880047249.01.T01:intron 35.0%
TCAACAACACAACACAACTT+AGG - Chr8:83771644-83771663 MsG0880047249.01.T01:three_prime_UTR 35.0%
TCTCTCTAGCCCTAAATATT+TGG + Chr8:83776679-83776698 None:intergenic 35.0%
TGCAGTTGTTCGTATTGAAT+TGG - Chr8:83776861-83776880 MsG0880047249.01.T01:five_prime_UTR 35.0%
TGCCAATTGAACATTTCCTT+CGG + Chr8:83774340-83774359 None:intergenic 35.0%
TGTGCACATAAACATGCAAT+AGG + Chr8:83776240-83776259 None:intergenic 35.0%
TTAATCAAATCCTGGAAGGT+TGG + Chr8:83773221-83773240 None:intergenic 35.0%
! AAATCTAAGAGGCTTTTGTG+TGG - Chr8:83774955-83774974 MsG0880047249.01.T01:intron 35.0%
! AATCTAAGAGGCTTTTGTGT+GGG - Chr8:83774956-83774975 MsG0880047249.01.T01:intron 35.0%
! ATTTTCATCCCAAAATCCCA+CGG + Chr8:83774691-83774710 None:intergenic 35.0%
! GAAATTAAAGATGAAGGTGC+AGG - Chr8:83773534-83773553 MsG0880047249.01.T01:intron 35.0%
! GGACGAAATTCTTTTCTCAA+AGG - Chr8:83774834-83774853 MsG0880047249.01.T01:intron 35.0%
! TTTCTGTTTCTTATCGTCTG+TGG - Chr8:83775980-83775999 MsG0880047249.01.T01:intron 35.0%
!! GCACTTTTTGCATACAGAAA+TGG - Chr8:83772795-83772814 MsG0880047249.01.T01:intron 35.0%
!! GTACAACCTACATTTTGACA+GGG + Chr8:83775614-83775633 None:intergenic 35.0%
!! TGTACAACCTACATTTTGAC+AGG + Chr8:83775615-83775634 None:intergenic 35.0%
!!! ACCTCGTCAAAGTTTTGAAA+GGG - Chr8:83773658-83773677 MsG0880047249.01.T01:intron 35.0%
!!! AGTTGTTTTTTGGGTTATCG+AGG - Chr8:83773303-83773322 MsG0880047249.01.T01:intron 35.0%
!!! TACCTCGTCAAAGTTTTGAA+AGG - Chr8:83773657-83773676 MsG0880047249.01.T01:intron 35.0%
AACTCGTTACACGGAGAAAA+AGG + Chr8:83773725-83773744 None:intergenic 40.0%
AAGAAGTGATAGGACATGGT+TGG + Chr8:83772620-83772639 None:intergenic 40.0%
AAGTCCCACATCAAGTAGTA+TGG + Chr8:83772579-83772598 None:intergenic 40.0%
AATATTTGGCCTCAAGGTTC+GGG + Chr8:83774476-83774495 None:intergenic 40.0%
AATCAAGAACTCGTCAATGC+TGG - Chr8:83775483-83775502 MsG0880047249.01.T01:intron 40.0%
ACCCTTTCAAAACTTTGACG+AGG + Chr8:83773662-83773681 None:intergenic 40.0%
ACGCTCTGATAGGTAACTTA+GGG - Chr8:83774535-83774554 MsG0880047249.01.T01:CDS 40.0%
ACTTAGTTCCATGACAGGTT+TGG + Chr8:83775912-83775931 None:intergenic 40.0%
AGAAGTGATAGGACATGGTT+GGG + Chr8:83772619-83772638 None:intergenic 40.0%
AGAGACGTTATTGTGTGACT+AGG - Chr8:83773038-83773057 MsG0880047249.01.T01:intron 40.0%
AGATGTCACGAATTTCACCA+TGG + Chr8:83771778-83771797 None:intergenic 40.0%
AGCCGAAGGAAATGTTCAAT+TGG - Chr8:83774335-83774354 MsG0880047249.01.T01:intron 40.0%
AGGACATGGTTGGGTATTAT+GGG + Chr8:83772610-83772629 None:intergenic 40.0%
AGTCCCACATCAAGTAGTAT+GGG + Chr8:83772578-83772597 None:intergenic 40.0%
AGTGAAAAACTAAAGGCAGC+AGG + Chr8:83773152-83773171 None:intergenic 40.0%
AGTTGCTTGTTCACTTCTTC+GGG + Chr8:83773564-83773583 None:intergenic 40.0%
ATCAAGAACTCGTCAATGCT+GGG - Chr8:83775484-83775503 MsG0880047249.01.T01:intron 40.0%
ATCAAGTAGTATGGGATGCT+CGG + Chr8:83772570-83772589 None:intergenic 40.0%
ATCATAAACAAGAGGAGCCT+TGG - Chr8:83773005-83773024 MsG0880047249.01.T01:intron 40.0%
ATCTGATTAGGTCATGGCTT+GGG + Chr8:83774617-83774636 None:intergenic 40.0%
ATTAGAGGATTGCTTTCTGG+AGG - Chr8:83776523-83776542 MsG0880047249.01.T01:exon 40.0%
CAAACTGCTTCTACCTTGAA+GGG - Chr8:83775657-83775676 MsG0880047249.01.T01:intron 40.0%
CAAGGAGCTAAACTCATATG+TGG - Chr8:83773985-83774004 MsG0880047249.01.T01:intron 40.0%
CAGCTGAGTACTTTGTCTAT+TGG + Chr8:83772850-83772869 None:intergenic 40.0%
CATCCCATACTACTTGATGT+GGG - Chr8:83772572-83772591 MsG0880047249.01.T01:intron 40.0%
CCAGAATATTCGGATATAGG+GGG - Chr8:83774499-83774518 MsG0880047249.01.T01:CDS 40.0%
CTAAGAGGCCTTTGTGAATA+AGG - Chr8:83775061-83775080 MsG0880047249.01.T01:intron 40.0%
CTACACATCAAAAATAGGGG+AGG + Chr8:83776768-83776787 None:intergenic 40.0%
CTTCAAGGTAGAAGCAGTTT+GGG + Chr8:83775658-83775677 None:intergenic 40.0%
GAACCTTGAGGCCAAATATT+CGG - Chr8:83774476-83774495 MsG0880047249.01.T01:CDS 40.0%
GAATATTTGGCCTCAAGGTT+CGG + Chr8:83774477-83774496 None:intergenic 40.0%
GAGTGTCAATCCACAATACA+AGG + Chr8:83773695-83773714 None:intergenic 40.0%
GAGTTTAACCCTCAAAATCC+CGG + Chr8:83771700-83771719 None:intergenic 40.0%
GCATTCACTGCAAGTACATT+TGG - Chr8:83774659-83774678 MsG0880047249.01.T01:CDS 40.0%
GCCACTGATATACATGTTCA+TGG - Chr8:83772152-83772171 MsG0880047249.01.T01:intron 40.0%
GCCAGAATATTCGGATATAG+GGG - Chr8:83774498-83774517 MsG0880047249.01.T01:CDS 40.0%
GGAAATGTTCAATTGGCATC+AGG - Chr8:83774342-83774361 MsG0880047249.01.T01:intron 40.0%
GGACCGCCAATATTCATATA+AGG - Chr8:83774375-83774394 MsG0880047249.01.T01:intron 40.0%
GGCCAGAATATTCGGATATA+GGG - Chr8:83774497-83774516 MsG0880047249.01.T01:CDS 40.0%
GGCCCTTATATGAATATTGG+CGG + Chr8:83774381-83774400 None:intergenic 40.0%
GTGAAAAACTAAAGGCAGCA+GGG + Chr8:83773151-83773170 None:intergenic 40.0%
GTGTAGGTAGCTAAGACTAA+TGG - Chr8:83772220-83772239 MsG0880047249.01.T01:intron 40.0%
TACGCTCTGATAGGTAACTT+AGG - Chr8:83774534-83774553 MsG0880047249.01.T01:CDS 40.0%
TAGGACATGGTTGGGTATTA+TGG + Chr8:83772611-83772630 None:intergenic 40.0%
TATCTGATTAGGTCATGGCT+TGG + Chr8:83774618-83774637 None:intergenic 40.0%
TCAAGATCCTCCTTGTATTG+TGG - Chr8:83773682-83773701 MsG0880047249.01.T01:intron 40.0%
TCTGTAGCAACCTGATAACA+GGG + Chr8:83775944-83775963 None:intergenic 40.0%
TGTCAATCCACAATACAAGG+AGG + Chr8:83773692-83773711 None:intergenic 40.0%
TGTTAAGGAGATTGGTAGAC+AGG - Chr8:83775846-83775865 MsG0880047249.01.T01:intron 40.0%
TGTTGGTATAATAGGGACTC+GGG + Chr8:83772423-83772442 None:intergenic 40.0%
TTATTGTGTGACTAGGTCAC+AGG - Chr8:83773045-83773064 MsG0880047249.01.T01:intron 40.0%
TTGCTTCTTGAGGAAGAAGA+GGG - Chr8:83775123-83775142 MsG0880047249.01.T01:intron 40.0%
TTGGCATCAGGTAACATGTT+TGG - Chr8:83774354-83774373 MsG0880047249.01.T01:intron 40.0%
TTTGCTTCTTGAGGAAGAAG+AGG - Chr8:83775122-83775141 MsG0880047249.01.T01:intron 40.0%
! AAGCAACCACCAAAGTACTT+GGG - Chr8:83772316-83772335 MsG0880047249.01.T01:intron 40.0%
! AATCTCCTTAACAAGTTGGG+AGG + Chr8:83775839-83775858 None:intergenic 40.0%
! ATCTTTTCCGTGCATCCTTT+TGG - Chr8:83775361-83775380 MsG0880047249.01.T01:intron 40.0%
! ATGGTTTGGGGGATAAGAAA+AGG + Chr8:83774449-83774468 None:intergenic 40.0%
! CAATAGACAAAGTACTCAGC+TGG - Chr8:83772848-83772867 MsG0880047249.01.T01:intron 40.0%
! GGACGGTTGATATTATCACT+TGG - Chr8:83774232-83774251 MsG0880047249.01.T01:intron 40.0%
! GGTAAACAAAGGGGTTTGTT+TGG + Chr8:83772978-83772997 None:intergenic 40.0%
! GTGTTGGTATAATAGGGACT+CGG + Chr8:83772424-83772443 None:intergenic 40.0%
! GTTGTGTTGTTGATGAGAGA+GGG + Chr8:83771637-83771656 None:intergenic 40.0%
! TAAGCAACCACCAAAGTACT+TGG - Chr8:83772315-83772334 MsG0880047249.01.T01:intron 40.0%
! TCTTTTCCGTGCATCCTTTT+GGG - Chr8:83775362-83775381 MsG0880047249.01.T01:intron 40.0%
! TGGTTTGGGGGATAAGAAAA+GGG + Chr8:83774448-83774467 None:intergenic 40.0%
! TGTTGTGTTGTTGATGAGAG+AGG + Chr8:83771638-83771657 None:intergenic 40.0%
! TTAGTACTAACGCTGGTTGT+CGG + Chr8:83772501-83772520 None:intergenic 40.0%
! TTTCTTTGCCGGGATTTTGA+GGG - Chr8:83771689-83771708 MsG0880047249.01.T01:three_prime_UTR 40.0%
! TTTTCTTTGCCGGGATTTTG+AGG - Chr8:83771688-83771707 MsG0880047249.01.T01:three_prime_UTR 40.0%
!! CTTTTGGCTAGTTGAAAGGA+CGG - Chr8:83774215-83774234 MsG0880047249.01.T01:intron 40.0%
!! TCCCAACTTGTTAAGGAGAT+TGG - Chr8:83775838-83775857 MsG0880047249.01.T01:intron 40.0%
!!! GGTGCTATTATAGCCCTTTT+GGG + Chr8:83774582-83774601 None:intergenic 40.0%
!!! TTTTTGGGTTATCGAGGTAC+TGG - Chr8:83773309-83773328 MsG0880047249.01.T01:intron 40.0%
AAAGCTGAACATGCCTCCTA+CGG + Chr8:83774114-83774133 None:intergenic 45.0%
AACAGCCTCTTCTTCCTCAA+AGG - Chr8:83774771-83774790 MsG0880047249.01.T01:intron 45.0%
AAGGGCTATAATAGCACCCT+TGG - Chr8:83774584-83774603 MsG0880047249.01.T01:CDS 45.0%
ACAGCACGACACAAACACAA+CGG + Chr8:83771486-83771505 None:intergenic 45.0%
ACATGGTTGGGTATTATGGG+GGG + Chr8:83772607-83772626 None:intergenic 45.0%
ACGAGAAAGACCAATTCCGT+AGG - Chr8:83774095-83774114 MsG0880047249.01.T01:intron 45.0%
ACGTACAAAAGCCTCCTTGA+GGG + Chr8:83776408-83776427 None:intergenic 45.0%
AGAAAGACCAATTCCGTAGG+AGG - Chr8:83774098-83774117 MsG0880047249.01.T01:intron 45.0%
AGGGCTATAATAGCACCCTT+GGG - Chr8:83774585-83774604 MsG0880047249.01.T01:CDS 45.0%
ATGATGAAGATGCATACGCG+AGG + Chr8:83771808-83771827 None:intergenic 45.0%
CAAACTTACTTGGCCCTTCA+AGG + Chr8:83775673-83775692 None:intergenic 45.0%
CAATGCTGGGATGAAGACAA+TGG - Chr8:83775497-83775516 MsG0880047249.01.T01:intron 45.0%
CAATTCTAGTCCTGCCAACT+TGG - Chr8:83776478-83776497 MsG0880047249.01.T01:CDS 45.0%
CCAAACTGCTTCTACCTTGA+AGG - Chr8:83775656-83775675 MsG0880047249.01.T01:intron 45.0%
CCCCCTATATCCGAATATTC+TGG + Chr8:83774502-83774521 None:intergenic 45.0%
CCTTCAAGGTAGAAGCAGTT+TGG + Chr8:83775659-83775678 None:intergenic 45.0%
CGGCCAGAATATTCGGATAT+AGG - Chr8:83774496-83774515 MsG0880047249.01.T01:CDS 45.0%
CTGGTTGTCACTACACAACA+AGG + Chr8:83772185-83772204 None:intergenic 45.0%
CTGTAGCAACCTGATAACAG+GGG + Chr8:83775943-83775962 None:intergenic 45.0%
GACATGGTTGGGTATTATGG+GGG + Chr8:83772608-83772627 None:intergenic 45.0%
GCATCCCATACTACTTGATG+TGG - Chr8:83772571-83772590 MsG0880047249.01.T01:intron 45.0%
GCTTAGATCTCTCAATAGCC+TGG + Chr8:83775533-83775552 None:intergenic 45.0%
GGACAACTTAGTTCCATGAC+AGG + Chr8:83775917-83775936 None:intergenic 45.0%
GGACATGGTTGGGTATTATG+GGG + Chr8:83772609-83772628 None:intergenic 45.0%
GGCATCACTATTCACTAGCA+CGG + Chr8:83776219-83776238 None:intergenic 45.0%
GGCTATTGAGAGATCTAAGC+AGG - Chr8:83775533-83775552 MsG0880047249.01.T01:intron 45.0%
GGTTTGGGGGATAAGAAAAG+GGG + Chr8:83774447-83774466 None:intergenic 45.0%
GTCTGTAGCAACCTGATAAC+AGG + Chr8:83775945-83775964 None:intergenic 45.0%
GTGCGAGAACTTGGATTTCA+TGG - Chr8:83776189-83776208 MsG0880047249.01.T01:intron 45.0%
GTTCTTTCCCCCAAGTACTT+TGG + Chr8:83772328-83772347 None:intergenic 45.0%
GTTTGGGGGATAAGAAAAGG+GGG + Chr8:83774446-83774465 None:intergenic 45.0%
TACGTACAAAAGCCTCCTTG+AGG + Chr8:83776409-83776428 None:intergenic 45.0%
TGATGAAGATGCATACGCGA+GGG + Chr8:83771807-83771826 None:intergenic 45.0%
TGGCAAGATTCGACTCAAAC+AGG + Chr8:83773125-83773144 None:intergenic 45.0%
TGTTTGAGTCGAATCTTGCC+AGG - Chr8:83773124-83773143 MsG0880047249.01.T01:intron 45.0%
TTGTCCTTACCCCTGTTATC+AGG - Chr8:83775931-83775950 MsG0880047249.01.T01:intron 45.0%
TTTGGGGGATAAGAAAAGGG+GGG + Chr8:83774445-83774464 None:intergenic 45.0%
! AAGGTTCGGGATTGATGGTT+TGG + Chr8:83774463-83774482 None:intergenic 45.0%
! AGAACAAGAACCAAGTTGGC+AGG + Chr8:83776491-83776510 None:intergenic 45.0%
! AGCAACCACCAAAGTACTTG+GGG - Chr8:83772317-83772336 MsG0880047249.01.T01:intron 45.0%
! AGGTTCGGGATTGATGGTTT+GGG + Chr8:83774462-83774481 None:intergenic 45.0%
! CAAGGAGGCTTTTGTACGTA+CGG - Chr8:83776409-83776428 MsG0880047249.01.T01:intron 45.0%
! CTTGTTGTGTAGTGACAACC+AGG - Chr8:83772183-83772202 MsG0880047249.01.T01:intron 45.0%
! CTTTTCCGTGCATCCTTTTG+GGG - Chr8:83775363-83775382 MsG0880047249.01.T01:intron 45.0%
! GAACTTTTTGACATGGGAGC+TGG - Chr8:83774297-83774316 MsG0880047249.01.T01:intron 45.0%
! GAGGGAGTACGTAAGATGTT+TGG + Chr8:83772350-83772369 None:intergenic 45.0%
! TACGCGTTTTACGCTCTGAT+AGG - Chr8:83774525-83774544 MsG0880047249.01.T01:CDS 45.0%
! TAGACAAAGTACTCAGCTGG+AGG - Chr8:83772851-83772870 MsG0880047249.01.T01:intron 45.0%
! TGAGAAAAGGTGCGAGAACT+TGG - Chr8:83776180-83776199 MsG0880047249.01.T01:intron 45.0%
! TTGCTCCTTTGAGGAAGAAG+AGG + Chr8:83774779-83774798 None:intergenic 45.0%
!! CATCTTCAAGTTGGAAGCCA+TGG + Chr8:83771735-83771754 None:intergenic 45.0%
!!! GGGTGCTATTATAGCCCTTT+TGG + Chr8:83774583-83774602 None:intergenic 45.0%
!!! AATTCAAAAAAATAATTTTT+GGG - Chr8:83771892-83771911 MsG0880047249.01.T01:CDS 5.0%
!!! TAATTCAAAAAAATAATTTT+TGG - Chr8:83771891-83771910 MsG0880047249.01.T01:CDS 5.0%
AAAAGCCTCCTTGAGGGAAC+TGG + Chr8:83776402-83776421 None:intergenic 50.0%
AAATGGTGTGGGCGCAATGA+AGG + Chr8:83775579-83775598 None:intergenic 50.0%
AACTCAATCTCCCGCATCCA+TGG - Chr8:83771715-83771734 MsG0880047249.01.T01:three_prime_UTR 50.0%
AAGTCTCACGTGGAGTGGTA+TGG + Chr8:83772380-83772399 None:intergenic 50.0%
AAGTTGGAAGCCATGGATGC+GGG + Chr8:83771728-83771747 None:intergenic 50.0%
ACACAACGGAACGCAGAAGT+TGG + Chr8:83771472-83771491 None:intergenic 50.0%
ACATCTCATGCCAACCTTCC+AGG - Chr8:83773208-83773227 MsG0880047249.01.T01:intron 50.0%
ACCATCAATCCCGAACCTTG+AGG - Chr8:83774464-83774483 MsG0880047249.01.T01:intron 50.0%
AGTCTCACGTGGAGTGGTAT+GGG + Chr8:83772379-83772398 None:intergenic 50.0%
ATGGATCTGTTCGAGCTGAG+GGG + Chr8:83771759-83771778 None:intergenic 50.0%
ATTAAGAGACGTGGCACTCG+AGG + Chr8:83776648-83776667 None:intergenic 50.0%
CAGAAATGGCTTCCAGAAGC+TGG - Chr8:83772809-83772828 MsG0880047249.01.T01:intron 50.0%
CAGAAGTTGGACATGTGCTG+TGG + Chr8:83771459-83771478 None:intergenic 50.0%
CATGGATCTGTTCGAGCTGA+GGG + Chr8:83771760-83771779 None:intergenic 50.0%
CTGAGGGGTCATCTTCAAGT+TGG + Chr8:83771744-83771763 None:intergenic 50.0%
CTTTCCCCCAAGTACTTTGG+TGG + Chr8:83772325-83772344 None:intergenic 50.0%
GAACATGCCTCCTACGGAAT+TGG + Chr8:83774108-83774127 None:intergenic 50.0%
GACAATGGATGAGACTGACC+AGG - Chr8:83775512-83775531 MsG0880047249.01.T01:intron 50.0%
GAGTGGTATGGGATGCTTGA+GGG + Chr8:83772368-83772387 None:intergenic 50.0%
GCAACCTGATAACAGGGGTA+AGG + Chr8:83775938-83775957 None:intergenic 50.0%
GCAAGTGAATCTACAGCCGA+AGG - Chr8:83774321-83774340 MsG0880047249.01.T01:intron 50.0%
GCGTGGAAGAATGCCCAAAA+GGG - Chr8:83774566-83774585 MsG0880047249.01.T01:CDS 50.0%
GGAAGATGAGGGACTGCAAA+AGG - Chr8:83772883-83772902 MsG0880047249.01.T01:intron 50.0%
GGGATTGTTCCCCATGTACT+TGG + Chr8:83772535-83772554 None:intergenic 50.0%
TACCACTCCACGTGAGACTT+AGG - Chr8:83772380-83772399 MsG0880047249.01.T01:intron 50.0%
TCATCCCAAAATCCCACGGT+GGG + Chr8:83774687-83774706 None:intergenic 50.0%
TGGCCGAATATTTGGCCTCA+AGG + Chr8:83774482-83774501 None:intergenic 50.0%
TTCATCCCAAAATCCCACGG+TGG + Chr8:83774688-83774707 None:intergenic 50.0%
TTTGCAGTCCCTCATCTTCC+CGG + Chr8:83772883-83772902 None:intergenic 50.0%
! AGGCTTTTGTACGTACGGAC+TGG - Chr8:83776414-83776433 MsG0880047249.01.T01:intron 50.0%
! ATGGCTTGGGAATGATCCCA+AGG + Chr8:83774604-83774623 None:intergenic 50.0%
! CAAGTTGGAAGCCATGGATG+CGG + Chr8:83771729-83771748 None:intergenic 50.0%
! GCAACCACCAAAGTACTTGG+GGG - Chr8:83772318-83772337 MsG0880047249.01.T01:intron 50.0%
! GGTTCGGGATTGATGGTTTG+GGG + Chr8:83774461-83774480 None:intergenic 50.0%
! GTTCGGGATTGATGGTTTGG+GGG + Chr8:83774460-83774479 None:intergenic 50.0%
! TGGCTTGGGAATGATCCCAA+GGG + Chr8:83774603-83774622 None:intergenic 50.0%
!! AACGCTGGTTGTCGGTGTTT+TGG + Chr8:83772493-83772512 None:intergenic 50.0%
!! GAAGGCCTCCCAACTTGTTA+AGG - Chr8:83775831-83775850 MsG0880047249.01.T01:intron 50.0%
!! GATGAGAGAGGGAGCATTAG+TGG + Chr8:83771626-83771645 None:intergenic 50.0%
!!! GGGCCTAGGCTATTTTTGTG+TGG - Chr8:83775390-83775409 MsG0880047249.01.T01:CDS 50.0%
!!! GTTTTGGAGAAGACCACCGA+CGG + Chr8:83772477-83772496 None:intergenic 50.0%
AACTAAAGGCAGCAGGGTCC+TGG + Chr8:83773145-83773164 None:intergenic 55.0%
AACTTAGGGAGTGAGTCGCG+TGG - Chr8:83774549-83774568 MsG0880047249.01.T01:CDS 55.0%
AAGATGCATACGCGAGGGCA+CGG + Chr8:83771802-83771821 None:intergenic 55.0%
ACTCAGCTGGAGGAACTCAC+CGG - Chr8:83772861-83772880 MsG0880047249.01.T01:intron 55.0%
AGGAACTCACCGGGAAGATG+AGG - Chr8:83772871-83772890 MsG0880047249.01.T01:intron 55.0%
ATGCTCGGCGAAACACTCAG+GGG + Chr8:83772555-83772574 None:intergenic 55.0%
CCATGGATCTGTTCGAGCTG+AGG + Chr8:83771761-83771780 None:intergenic 55.0%
CCTCAGCTCGAACAGATCCA+TGG - Chr8:83771758-83771777 MsG0880047249.01.T01:three_prime_UTR 55.0%
CGCGTGGAAGAATGCCCAAA+AGG - Chr8:83774565-83774584 MsG0880047249.01.T01:CDS 55.0%
CGTCTCTAACCATTGGGCCA+AGG + Chr8:83773025-83773044 None:intergenic 55.0%
GATGCTCGGCGAAACACTCA+GGG + Chr8:83772556-83772575 None:intergenic 55.0%
GCCTCAAGGTTCGGGATTGA+TGG + Chr8:83774468-83774487 None:intergenic 55.0%
GGAACTCACCGGGAAGATGA+GGG - Chr8:83772872-83772891 MsG0880047249.01.T01:intron 55.0%
GGAGTGGTATGGGATGCTTG+AGG + Chr8:83772369-83772388 None:intergenic 55.0%
GTGCCCTTGCTTAGGGCTAA+CGG + Chr8:83774402-83774421 None:intergenic 55.0%
TGTGGGTCAAAACCCTCCGT+CGG - Chr8:83772458-83772477 MsG0880047249.01.T01:CDS 55.0%
ACGTGAGACTTAGGCGTCCC+AGG - Chr8:83772389-83772408 MsG0880047249.01.T01:intron 60.0%
AGACTTAGGCGTCCCAGGAC+AGG - Chr8:83772394-83772413 MsG0880047249.01.T01:intron 60.0%
AGCCTCCTTGAGGGAACTGG+AGG + Chr8:83776399-83776418 None:intergenic 60.0%
AGGGCCGTTAGCCCTAAGCA+AGG - Chr8:83774395-83774414 MsG0880047249.01.T01:intron 60.0%
AGTACATTTGGCGCCCACCG+TGG - Chr8:83774671-83774690 MsG0880047249.01.T01:CDS 60.0%
CAAGAGGAGCCTTGGCCCAA+TGG - Chr8:83773013-83773032 MsG0880047249.01.T01:intron 60.0%
CGCCTAAGTCTCACGTGGAG+TGG + Chr8:83772385-83772404 None:intergenic 60.0%
CTCAGCTGGAGGAACTCACC+GGG - Chr8:83772862-83772881 MsG0880047249.01.T01:intron 60.0%
GGATGCTCGGCGAAACACTC+AGG + Chr8:83772557-83772576 None:intergenic 60.0%
GGCACCCCCATGACAGAATG+GGG - Chr8:83774417-83774436 MsG0880047249.01.T01:intron 60.0%
GGGCACCCCCATGACAGAAT+GGG - Chr8:83774416-83774435 MsG0880047249.01.T01:intron 60.0%
GGGCCGTTAGCCCTAAGCAA+GGG - Chr8:83774396-83774415 MsG0880047249.01.T01:intron 60.0%
GTACATTTGGCGCCCACCGT+GGG - Chr8:83774672-83774691 MsG0880047249.01.T01:CDS 60.0%
TGGAGAAGACCACCGACGGA+GGG + Chr8:83772473-83772492 None:intergenic 60.0%
TGGGACGCCTAAGTCTCACG+TGG + Chr8:83772390-83772409 None:intergenic 60.0%
TTGGAGAAGACCACCGACGG+AGG + Chr8:83772474-83772493 None:intergenic 60.0%
! AGGGCACCCCCATGACAGAA+TGG - Chr8:83774415-83774434 MsG0880047249.01.T01:intron 60.0%
!! CATGGGGGTGCCCTTGCTTA+GGG + Chr8:83774409-83774428 None:intergenic 60.0%
!! TCATGGGGGTGCCCTTGCTT+AGG + Chr8:83774410-83774429 None:intergenic 60.0%
CGCCTCCAGTTCCCTCAAGG+AGG - Chr8:83776394-83776413 MsG0880047249.01.T01:intron 65.0%
GGACTCGGGCATCCTGTCCT+GGG + Chr8:83772409-83772428 None:intergenic 65.0%
GGCGCCCCATTCTGTCATGG+GGG + Chr8:83774424-83774443 None:intergenic 65.0%
GGGCGCCCCATTCTGTCATG+GGG + Chr8:83774425-83774444 None:intergenic 65.0%
GGGTCAAAACCCTCCGTCGG+TGG - Chr8:83772461-83772480 MsG0880047249.01.T01:CDS 65.0%
TGGCGCCTCCAGTTCCCTCA+AGG - Chr8:83776391-83776410 MsG0880047249.01.T01:intron 65.0%
! GGCGCCCACCGTGGGATTTT+GGG - Chr8:83774680-83774699 MsG0880047249.01.T01:CDS 65.0%
! GGGGCGCCCCATTCTGTCAT+GGG + Chr8:83774426-83774445 None:intergenic 65.0%
! TGGCGCCCACCGTGGGATTT+TGG - Chr8:83774679-83774698 MsG0880047249.01.T01:CDS 65.0%
!! GGAACTGGAGGCGCCAATCC+TGG + Chr8:83776387-83776406 None:intergenic 65.0%
GGGACTCGGGCATCCTGTCC+TGG + Chr8:83772410-83772429 None:intergenic 70.0%
!! GGGGGCGCCCCATTCTGTCA+TGG + Chr8:83774427-83774446 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 83771388 83776880 83771388 ID=MsG0880047249.01;Name=MsG0880047249.01
Chr8 mRNA 83771388 83776880 83771388 ID=MsG0880047249.01.T01;Parent=MsG0880047249.01;Name=MsG0880047249.01.T01;_AED=0.49;_eAED=0.54;_QI=346|0.88|0.9|1|1|1|10|428|332
Chr8 exon 83771388 83771920 83771388 ID=MsG0880047249.01.T01:exon:35777;Parent=MsG0880047249.01.T01
Chr8 exon 83772241 83772315 83772241 ID=MsG0880047249.01.T01:exon:35776;Parent=MsG0880047249.01.T01
Chr8 exon 83772401 83772493 83772401 ID=MsG0880047249.01.T01:exon:35775;Parent=MsG0880047249.01.T01
Chr8 exon 83772585 83772641 83772585 ID=MsG0880047249.01.T01:exon:35774;Parent=MsG0880047249.01.T01
Chr8 exon 83772714 83772793 83772714 ID=MsG0880047249.01.T01:exon:35773;Parent=MsG0880047249.01.T01
Chr8 exon 83773905 83774002 83773905 ID=MsG0880047249.01.T01:exon:35772;Parent=MsG0880047249.01.T01
Chr8 exon 83774248 83774285 83774248 ID=MsG0880047249.01.T01:exon:35771;Parent=MsG0880047249.01.T01
Chr8 exon 83774474 83774756 83774474 ID=MsG0880047249.01.T01:exon:35770;Parent=MsG0880047249.01.T01
Chr8 exon 83775364 83775456 83775364 ID=MsG0880047249.01.T01:exon:35769;Parent=MsG0880047249.01.T01
Chr8 exon 83776458 83776880 83776458 ID=MsG0880047249.01.T01:exon:35768;Parent=MsG0880047249.01.T01
Chr8 five_prime_UTR 83776535 83776880 83776535 ID=MsG0880047249.01.T01:five_prime_utr;Parent=MsG0880047249.01.T01
Chr8 CDS 83776458 83776534 83776458 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83775364 83775456 83775364 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83774474 83774756 83774474 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83774248 83774285 83774248 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83773905 83774002 83773905 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83772714 83772793 83772714 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83772585 83772641 83772585 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83772401 83772493 83772401 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83772241 83772315 83772241 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 CDS 83771816 83771920 83771816 ID=MsG0880047249.01.T01:cds;Parent=MsG0880047249.01.T01
Chr8 three_prime_UTR 83771388 83771815 83771388 ID=MsG0880047249.01.T01:three_prime_utr;Parent=MsG0880047249.01.T01
Gene Sequence

>MsG0880047249.01.T01

ATGGCTTCCAACTTGAAGATGACCCCTCAGCTCGAACAGATCCATGGTGAAATTCGTGACATCTTCCGTGCCCTCGCAAATGGCTTCCAGAAGCTGGATAAGATTAAAGATTCCAATAGACAAAGTACTCAGCTGGAGGAACTCACCGGGAAGATGAGGGACTGCAAAAGGTTGATAAAAGATTTTGATCGTGAAATTAAAGATGAAGGTGCAGGAAATCCCGAAGAAGTGAACAAGCAACTTAATGACGAAAAACAATCAATGGTCAATATCAGAACCCTTTTTTTTTCTTGGTCATGTTGGAAATCTAGTATCTACCTCGTCAAAGTTTTGAAAGGGTTCAAGATCCTCCTTGTATTGTGGATTGACACTCAAATTATCCTTTTTCTCCGTGTAACGAGTTATAAAGAATTTGTATATTGTCAAGCCATCAAATTAAGTGATCACCATATGATCAAGGAGCTAAACTCATATGTGGCACTGAGAAAAACGTACATGAATACGATTGGTAATAAAAAACTTGAACTTTTTGACATGGGAGCTGGAGCAAGTGAATCTACAGCCGAAGGAAATGTTCAATTGGCATCAGAAATGTCAAATCAAGAACTCGTCAATGCTGGGATGAAGACAATGGATGAGACTGACCAGGCTATTGAGAGATCTAAGCAGGTTGTACATCAAACAATTGAAGTTGGCACCCAAACTGCTTCTACCTTGAAGGGCCAAACTGAACAAATGGGCCGTATTGTTAATGAGCTTGATTCAATTCAGTTTTCAATAAAGAAGGCCTCCCAACTTGTTAAGGAGATTGGTAGACAGGTTGCTACAGACAAGTGCATCATGCTTTTTCTGTTTCTTATCGTCTGTGGTGTGATTGCCATTATTGTTGTGAAGATTGTGAATCCCAACAACAAAGATATTAGGGATATTCCAGGATTGGCGCCTCCAGTTCCCTCAAGGAGGCTTTTGTACGTACGGACTGGAGAACTTTTTGATTAA
Protein sequence

>MsG0880047249.01.T01

MASNLKMTPQLEQIHGEIRDIFRALANGFQKLDKIKDSNRQSTQLEELTGKMRDCKRLIKDFDREIKDEGAGNPEEVNKQLNDEKQSMVNIRTLFFSWSCWKSSIYLVKVLKGFKILLVLWIDTQIILFLRVTSYKEFVYCQAIKLSDHHMIKELNSYVALRKTYMNTIGNKKLELFDMGAGASESTAEGNVQLASEMSNQELVNAGMKTMDETDQAIERSKQVVHQTIEVGTQTASTLKGQTEQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIRDIPGLAPPVPSRRLLYVRTGELFD*