AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044317.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044317.01.T01 MTR_8g461030 88.158 76 8 1 31 105 118 193 5.24e-42 144
MsG0880044317.01.T01 MTR_8g461480 73.438 64 15 2 166 228 1 63 6.51e-23 99.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044317.01.T01 AT1G53670 62.264 106 39 1 1 105 82 187 1.94e-38 134
MsG0880044317.01.T01 AT1G53670 57.547 106 37 3 1 105 82 180 3.63e-32 118

Find 56 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACTTTCTCTTTCTGCTTT+TGG 0.137670 8:-39902997 MsG0880044317.01.T01:CDS
AGTAAACCACAATGCTAAAT+TGG 0.253774 8:+39901789 None:intergenic
ACTTCCTTGGTTTGAGCTTA+AGG 0.254966 8:+39906837 None:intergenic
CAGATGGTTTAATATTAAAA+TGG 0.274102 8:-39906785 MsG0880044317.01.T01:intron
CCACAAGAAGATTTGCAATA+TGG 0.289748 8:+39905813 None:intergenic
AGGGAGGCACTGTCGTAGTT+TGG 0.311323 8:-39905892 MsG0880044317.01.T01:CDS
CTTCCTTGGTTTGAGCTTAA+GGG 0.347472 8:+39906838 None:intergenic
ATTTAGCATTGTGGTTTACT+TGG 0.354243 8:-39901786 MsG0880044317.01.T01:CDS
CCCTACCACCATTCTTCATC+AGG 0.370260 8:-39902948 MsG0880044317.01.T01:CDS
TAAGCTGAAGGATTTATGTT+TGG 0.371386 8:-39903038 MsG0880044317.01.T01:CDS
GGGAGGCACTGTCGTAGTTT+GGG 0.374311 8:-39905891 MsG0880044317.01.T01:CDS
TGATATTGTGGTATGATTGC+TGG 0.385518 8:-39907449 None:intergenic
ATGGTAAGTCCCTTCAGTTT+TGG 0.402394 8:+39907336 None:intergenic
CTGGGCTTGCACTAGAGAAA+TGG 0.403305 8:+39901837 None:intergenic
ACCAAGTTTAATAGTGGAAC+TGG 0.412251 8:-39907123 MsG0880044317.01.T01:CDS
CAAACAAAGTACAAGCGAAT+AGG 0.421634 8:+39907249 None:intergenic
CACTAATGGTGAAGACTTGA+AGG 0.427932 8:-39905846 MsG0880044317.01.T01:CDS
ATTTGACTATCTTACTTCCT+TGG 0.431236 8:+39906824 None:intergenic
CCATCTTATTACCAGCCAAT+TGG 0.432412 8:-39907096 MsG0880044317.01.T01:CDS
AAAAGTACTTACTCAAATAA+GGG 0.438375 8:+39907295 None:intergenic
AAACAGCACAGAGAACTTCT+TGG 0.444117 8:+39907025 None:intergenic
TGCAAGCCCAGAAAAGGCTT+TGG 0.445770 8:-39901825 MsG0880044317.01.T01:CDS
CTCTAGTGCAAGCCCAGAAA+AGG 0.452139 8:-39901831 MsG0880044317.01.T01:CDS
CCAATTGGCTGGTAATAAGA+TGG 0.475719 8:+39907096 None:intergenic
GTGGTTTACTTGGATACCTA+TGG 0.480718 8:-39901776 MsG0880044317.01.T01:CDS
TCATCTACCAAGTTTAATAG+TGG 0.496314 8:-39907129 MsG0880044317.01.T01:CDS
ACCAGTTCCACTATTAAACT+TGG 0.499953 8:+39907122 None:intergenic
ATTGCAAATCTTCTTGTGGA+AGG 0.504836 8:-39905809 MsG0880044317.01.T01:CDS
AGCACAGAGAACTTCTTGGC+GGG 0.512905 8:+39907029 None:intergenic
GGCACTGTCGTAGTTTGGGC+TGG 0.516663 8:-39905887 MsG0880044317.01.T01:CDS
TTGCAAATCTTCTTGTGGAA+GGG 0.534595 8:-39905808 MsG0880044317.01.T01:intron
GATGATGGCCCTCCACCCAC+AGG 0.547765 8:-39906976 MsG0880044317.01.T01:CDS
AAGAATGGTGGTAGGGAATG+TGG 0.550704 8:+39902955 None:intergenic
CCTGATGAAGAATGGTGGTA+GGG 0.551662 8:+39902948 None:intergenic
TACTGGAATACCAAAACTGA+AGG 0.552699 8:-39907346 MsG0880044317.01.T01:CDS
CCATATTGCAAATCTTCTTG+TGG 0.557152 8:-39905813 MsG0880044317.01.T01:CDS
AGTATACCAATTTAGCATTG+TGG 0.559638 8:-39901795 MsG0880044317.01.T01:CDS
ATGATTAACCTGATGAAGAA+TGG 0.560257 8:+39902940 None:intergenic
GCTGTTTGTGATGCTCATCT+CGG 0.566492 8:-39907009 MsG0880044317.01.T01:CDS
ACCTGATGAAGAATGGTGGT+AGG 0.586031 8:+39902947 None:intergenic
AGTTTAATAGTGGAACTGGT+TGG 0.589954 8:-39907119 MsG0880044317.01.T01:CDS
GCTGTTGAAGATGTCACTAA+TGG 0.594266 8:-39905860 MsG0880044317.01.T01:CDS
AGATAGAAATATAATAGCAA+AGG 0.606627 8:+39901918 None:intergenic
CAGCACAGAGAACTTCTTGG+CGG 0.609123 8:+39907028 None:intergenic
ATGAAATGAGAAAGAACGAA+GGG 0.622953 8:-39903066 MsG0880044317.01.T01:CDS
GCACAGAGAACTTCTTGGCG+GGG 0.628010 8:+39907030 None:intergenic
CGAAGGGTACTGTAAGCTGA+AGG 0.628955 8:-39903050 MsG0880044317.01.T01:CDS
GTGTGTCACAACATATGCAA+TGG 0.629248 8:+39907317 None:intergenic
AGAGAAATGGCATCAAGTGG+TGG 0.629444 8:+39901850 None:intergenic
ATGTGTCACTCAGAAGCAGA+TGG 0.630866 8:-39906801 MsG0880044317.01.T01:CDS
GATGAAATGAGAAAGAACGA+AGG 0.636636 8:-39903067 MsG0880044317.01.T01:CDS
CTTCCCTTAAGCTCAAACCA+AGG 0.648370 8:-39906841 MsG0880044317.01.T01:CDS
ACTGGAATACCAAAACTGAA+GGG 0.657265 8:-39907345 MsG0880044317.01.T01:CDS
ACTAGAGAAATGGCATCAAG+TGG 0.675605 8:+39901847 None:intergenic
ATGCTAACATTATGTGATCG+AGG 0.688572 8:-39901892 MsG0880044317.01.T01:CDS
ATTAACCTGATGAAGAATGG+TGG 0.731909 8:+39902943 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAATATACTCATATA+CGG + Chr8:39905803-39905822 None:intergenic 10.0%
!! ATTTGTAAAGATTATTAATT+TGG - Chr8:39902821-39902840 MsG0880044317.01.T01:intron 10.0%
!!! TACATTATTATTTTTTATAG+AGG - Chr8:39906503-39906522 MsG0880044317.01.T01:intron 10.0%
!!! TCTAAAATGAATTAAAAAAA+CGG + Chr8:39901830-39901849 None:intergenic 10.0%
!!! TTTCACATTTTATAAAAATT+TGG + Chr8:39902535-39902554 None:intergenic 10.0%
!! AAAAATAACAATAGTATCTA+TGG + Chr8:39907211-39907230 None:intergenic 15.0%
!! AATATAATATACTCATATAC+GGG + Chr8:39905802-39905821 None:intergenic 15.0%
!! CATAAAAATTCATAATAACT+CGG + Chr8:39907090-39907109 None:intergenic 15.0%
!! TCTATTGTATAAACAAAAAT+TGG + Chr8:39904110-39904129 None:intergenic 15.0%
!! TTAAAAAAATTCCATAGTAT+CGG - Chr8:39904235-39904254 MsG0880044317.01.T01:intron 15.0%
!! TTATTGAATATACTTTGATA+TGG + Chr8:39904555-39904574 None:intergenic 15.0%
!! TTTATGTTTAGAGATTTAAT+AGG - Chr8:39907104-39907123 MsG0880044317.01.T01:CDS 15.0%
!!! AATCTTTTAAAGTTTTCAAT+TGG - Chr8:39904865-39904884 MsG0880044317.01.T01:intron 15.0%
!!! ATTAATTTAGCTGATTTTTT+TGG - Chr8:39907127-39907146 MsG0880044317.01.T01:CDS 15.0%
!!! ATTGATTGTTTCTTATAATA+AGG + Chr8:39904716-39904735 None:intergenic 15.0%
!!! ATTTAAAGATTCTTTAGTTT+TGG - Chr8:39903924-39903943 MsG0880044317.01.T01:intron 15.0%
!!! TAAGAAACAATCAATTTTTT+TGG - Chr8:39904721-39904740 MsG0880044317.01.T01:intron 15.0%
!!! TTAATTTAGCTGATTTTTTT+GGG - Chr8:39907128-39907147 MsG0880044317.01.T01:CDS 15.0%
!!! TTATATAAATCGATTTTTTG+TGG + Chr8:39904372-39904391 None:intergenic 15.0%
!! AAGGGATTTAATTAATAACA+TGG + Chr8:39903788-39903807 None:intergenic 20.0%
!! ACATAAACCAATTCAATTAA+AGG + Chr8:39902853-39902872 None:intergenic 20.0%
!! ACATTGATCATTTAATAACA+TGG + Chr8:39904186-39904205 None:intergenic 20.0%
!! ACCGTATGAATAATAAATAT+GGG + Chr8:39905827-39905846 None:intergenic 20.0%
!! AGATAGAAATATAATAGCAA+AGG + Chr8:39907284-39907303 None:intergenic 20.0%
!! ATGACAATTATGTTGTATTA+TGG + Chr8:39905084-39905103 None:intergenic 20.0%
!! ATTTAATAACATGGTATGAT+GGG + Chr8:39904177-39904196 None:intergenic 20.0%
!! CAGATGGTTTAATATTAAAA+TGG - Chr8:39902414-39902433 MsG0880044317.01.T01:intron 20.0%
!! CATAATGATATAAAAAGAGT+TGG - Chr8:39903450-39903469 MsG0880044317.01.T01:intron 20.0%
!! CTATATTTCAATATGTTCAA+TGG - Chr8:39905056-39905075 MsG0880044317.01.T01:intron 20.0%
!! CTTAGCTCATTTAAATTAAT+AGG + Chr8:39905737-39905756 None:intergenic 20.0%
!! GAATTTACCTTTAATTGAAT+TGG - Chr8:39902843-39902862 MsG0880044317.01.T01:intron 20.0%
!! GTTGAAAAAAATTGAAAGAT+GGG + Chr8:39903004-39903023 None:intergenic 20.0%
!! TAAAAAAATTCCATAGTATC+GGG - Chr8:39904236-39904255 MsG0880044317.01.T01:intron 20.0%
!! TAAATAAATACCACAATATC+AGG + Chr8:39901991-39902010 None:intergenic 20.0%
!! TACCGTATGAATAATAAATA+TGG + Chr8:39905828-39905847 None:intergenic 20.0%
!! TCCCATATTTATTATTCATA+CGG - Chr8:39905823-39905842 MsG0880044317.01.T01:CDS 20.0%
!! TCTATTAACAAGAAATTTGA+TGG + Chr8:39904634-39904653 None:intergenic 20.0%
!! TTTATTAAGTATGTATTGTG+CGG - Chr8:39906562-39906581 MsG0880044317.01.T01:intron 20.0%
!! TTTCCACTAAAAAAAGAAAA+AGG + Chr8:39903485-39903504 None:intergenic 20.0%
!!! AAAAAGTACTTACTCAAATA+AGG + Chr8:39901908-39901927 None:intergenic 20.0%
!!! AAAAGTACTTACTCAAATAA+GGG + Chr8:39901907-39901926 None:intergenic 20.0%
!!! ACTCTTTTTATATCATTATG+AGG + Chr8:39903450-39903469 None:intergenic 20.0%
!!! CAAACAACTATTTTGTTTTA+GGG - Chr8:39906529-39906548 MsG0880044317.01.T01:intron 20.0%
!!! GTCAACTTTTTCTTATAATA+AGG - Chr8:39904815-39904834 MsG0880044317.01.T01:intron 20.0%
!!! TAAGAAAAAGTTGACTTTTT+AGG + Chr8:39904810-39904829 None:intergenic 20.0%
!!! TTCGTTTCTTTTTAGAATAA+CGG - Chr8:39906302-39906321 MsG0880044317.01.T01:intron 20.0%
!!! TTTCCTTTTTCTTTTTTTAG+TGG - Chr8:39903479-39903498 MsG0880044317.01.T01:intron 20.0%
!!! TTTTTTAGTGGAAAAAGAAT+TGG - Chr8:39903491-39903510 MsG0880044317.01.T01:intron 20.0%
! AAAAACATGCAAACAGAAAA+AGG + Chr8:39907181-39907200 None:intergenic 25.0%
! AAAACATGCAAACAGAAAAA+GGG + Chr8:39907180-39907199 None:intergenic 25.0%
! AAATAACATGAATCTAACCA+TGG - Chr8:39902733-39902752 MsG0880044317.01.T01:intron 25.0%
! AAATCCTAATTCAACATTAG+TGG - Chr8:39905440-39905459 MsG0880044317.01.T01:intron 25.0%
! AATTATTTGCAAGTTTCTTC+TGG + Chr8:39906434-39906453 None:intergenic 25.0%
! AATTCGAGAAAATATTATGC+CGG - Chr8:39904473-39904492 MsG0880044317.01.T01:intron 25.0%
! ACCTATTTATTAAACGAGTT+AGG + Chr8:39905692-39905711 None:intergenic 25.0%
! AGAAGATGAAAAACAAAATG+AGG - Chr8:39904290-39904309 MsG0880044317.01.T01:intron 25.0%
! ATTGAAATATAGCCACAATA+TGG + Chr8:39905048-39905067 None:intergenic 25.0%
! ATTTCTTGTTAATAGAGCTT+AGG - Chr8:39904638-39904657 MsG0880044317.01.T01:intron 25.0%
! CAAAGAATCTTCAAATTAGA+AGG - Chr8:39904077-39904096 MsG0880044317.01.T01:intron 25.0%
! CATTTAATAACATGGTATGA+TGG + Chr8:39904178-39904197 None:intergenic 25.0%
! CCTAAAACAAAATAGTTGTT+TGG + Chr8:39906531-39906550 None:intergenic 25.0%
! CGGCTTAATAAAACAAAATA+TGG + Chr8:39905313-39905332 None:intergenic 25.0%
! CTATTCTTAAAAACCAAAAG+AGG - Chr8:39902708-39902727 MsG0880044317.01.T01:intron 25.0%
! CTTCTAATTTGAAGATTCTT+TGG + Chr8:39904079-39904098 None:intergenic 25.0%
! CTTGCAAACTTATATTAAAC+AGG + Chr8:39902648-39902667 None:intergenic 25.0%
! GGTTGAAAAAAATTGAAAGA+TGG + Chr8:39903005-39903024 None:intergenic 25.0%
! TCATTCAAACTTTGAATTAG+AGG - Chr8:39905604-39905623 MsG0880044317.01.T01:intron 25.0%
! TTACACATTACTCAACTATA+TGG + Chr8:39905111-39905130 None:intergenic 25.0%
! TTAGAAGTAAATCCATATTG+TGG - Chr8:39905033-39905052 MsG0880044317.01.T01:intron 25.0%
! TTATCATTTAGTATCAGACA+TGG - Chr8:39906766-39906785 MsG0880044317.01.T01:intron 25.0%
! TTATTAAGTATGTATTGTGC+GGG - Chr8:39906563-39906582 MsG0880044317.01.T01:intron 25.0%
! TTGGGTATTATAAGTGTTAT+GGG - Chr8:39906876-39906895 MsG0880044317.01.T01:intron 25.0%
!! AAACGTGGTTTAAAATGATT+TGG - Chr8:39902798-39902817 MsG0880044317.01.T01:intron 25.0%
!! AAAGAATCACTTGTTGAATT+GGG - Chr8:39902269-39902288 MsG0880044317.01.T01:intron 25.0%
!! CCATTATAGCTAGATTTTAA+GGG - Chr8:39906935-39906954 MsG0880044317.01.T01:intron 25.0%
!! CTTTGATATGGATTATTACA+AGG + Chr8:39904543-39904562 None:intergenic 25.0%
!! CTTTTTCTTATAATAAGGAC+CGG - Chr8:39904820-39904839 MsG0880044317.01.T01:intron 25.0%
!! GATCAATTTACAGATTTTGT+CGG + Chr8:39902443-39902462 None:intergenic 25.0%
!! GATTTCACATTTTTACCAAT+TGG + Chr8:39902121-39902140 None:intergenic 25.0%
!! TAAAGAATCACTTGTTGAAT+TGG - Chr8:39902268-39902287 MsG0880044317.01.T01:intron 25.0%
!! TCCATTATAGCTAGATTTTA+AGG - Chr8:39906934-39906953 MsG0880044317.01.T01:intron 25.0%
!! TCTTATTCTGATTTAGAGTT+GGG - Chr8:39906620-39906639 MsG0880044317.01.T01:intron 25.0%
!! TGTTTGTTTGTTAAGAGTAA+CGG + Chr8:39906023-39906042 None:intergenic 25.0%
!! TTCTTATTCTGATTTAGAGT+TGG - Chr8:39906619-39906638 MsG0880044317.01.T01:intron 25.0%
!! TTGGATTTTGTTGAATATGA+TGG - Chr8:39906180-39906199 MsG0880044317.01.T01:intron 25.0%
!! TTGTTTCTTATAATAAGGAC+CGG + Chr8:39904711-39904730 None:intergenic 25.0%
!!! ACGTGTTTTAGAATTTAGAT+TGG - Chr8:39907257-39907276 MsG0880044317.01.T01:intron 25.0%
!!! ATACTACTTGTTGTGAAAAT+CGG + Chr8:39906659-39906678 None:intergenic 25.0%
!!! CCAAACAACTATTTTGTTTT+AGG - Chr8:39906528-39906547 MsG0880044317.01.T01:intron 25.0%
!!! GTCTAAAAGTTTGTTTGTTT+TGG - Chr8:39902322-39902341 MsG0880044317.01.T01:intron 25.0%
!!! TAATTCATTTTAGAGAGTAC+TGG - Chr8:39901836-39901855 MsG0880044317.01.T01:CDS 25.0%
!!! TCATTTTGTTTTTCATCTTC+TGG + Chr8:39904291-39904310 None:intergenic 25.0%
!!! TTTTGCAACTAAACTTGTTT+GGG - Chr8:39905538-39905557 MsG0880044317.01.T01:intron 25.0%
!!! TTTTTGCAACTAAACTTGTT+TGG - Chr8:39905537-39905556 MsG0880044317.01.T01:intron 25.0%
AAACATGCAAACAGAAAAAG+GGG + Chr8:39907179-39907198 None:intergenic 30.0%
AACACAAAGTAAAATGACGA+AGG + Chr8:39903071-39903090 None:intergenic 30.0%
AATTCAAAGTTTGAATGACC+AGG + Chr8:39905602-39905621 None:intergenic 30.0%
ACAACCACTAATGTTGAATT+AGG + Chr8:39905447-39905466 None:intergenic 30.0%
ACACAAAGTAAAATGACGAA+GGG + Chr8:39903070-39903089 None:intergenic 30.0%
ACAGTTCTTTCAAATTCTCA+TGG - Chr8:39905858-39905877 MsG0880044317.01.T01:CDS 30.0%
ACTCGTTTAATAAATAGGTC+AGG - Chr8:39905693-39905712 MsG0880044317.01.T01:intron 30.0%
ACTTGAGAACTATGTATGAA+TGG + Chr8:39906598-39906617 None:intergenic 30.0%
AGTAAACCACAATGCTAAAT+TGG + Chr8:39907413-39907432 None:intergenic 30.0%
AGTATACCAATTTAGCATTG+TGG - Chr8:39907404-39907423 MsG0880044317.01.T01:intron 30.0%
ATCTAACCATGGATATTGAA+AGG - Chr8:39902744-39902763 MsG0880044317.01.T01:intron 30.0%
ATGAAATGAGAAAGAACGAA+GGG - Chr8:39906133-39906152 MsG0880044317.01.T01:intron 30.0%
ATGATTAACCTGATGAAGAA+TGG + Chr8:39906262-39906281 None:intergenic 30.0%
ATGATTCATGGACTTTGATA+TGG + Chr8:39904681-39904700 None:intergenic 30.0%
ATTAAACTTGGTAGATGATC+TGG + Chr8:39902068-39902087 None:intergenic 30.0%
ATTCAAAGTTTGAATGACCA+GGG + Chr8:39905601-39905620 None:intergenic 30.0%
ATTGATTGTCTTGACAATGA+TGG - Chr8:39903220-39903239 MsG0880044317.01.T01:intron 30.0%
ATTTAGCATTGTGGTTTACT+TGG - Chr8:39907413-39907432 MsG0880044317.01.T01:intron 30.0%
ATTTGACTATCTTACTTCCT+TGG + Chr8:39902378-39902397 None:intergenic 30.0%
CAAAATTCGCTCAAATTACA+AGG + Chr8:39903992-39904011 None:intergenic 30.0%
CAAAGTAATGCAAAGCTAAT+TGG - Chr8:39902901-39902920 MsG0880044317.01.T01:CDS 30.0%
CCCTTAAAATCTAGCTATAA+TGG + Chr8:39906938-39906957 None:intergenic 30.0%
CTTGGGTATTATAAGTGTTA+TGG - Chr8:39906875-39906894 MsG0880044317.01.T01:intron 30.0%
GAATCTTCAAATTAGAAGGT+TGG - Chr8:39904081-39904100 MsG0880044317.01.T01:intron 30.0%
GAGTAAACATCATTTAACTC+AGG + Chr8:39903841-39903860 None:intergenic 30.0%
GCCTAACTCGTTTAATAAAT+AGG - Chr8:39905688-39905707 MsG0880044317.01.T01:intron 30.0%
TAACAAGTTCAAGATGATTC+AGG + Chr8:39902029-39902048 None:intergenic 30.0%
TAAGCTGAAGGATTTATGTT+TGG - Chr8:39906161-39906180 MsG0880044317.01.T01:intron 30.0%
TACTTCTAAGCAATAAAACC+TGG + Chr8:39905022-39905041 None:intergenic 30.0%
TAGACTCATAAGTGAAACAA+AGG + Chr8:39903192-39903211 None:intergenic 30.0%
TATAAGTGTTATGGGATGTT+CGG - Chr8:39906884-39906903 MsG0880044317.01.T01:intron 30.0%
TCAAAAGCTTAAACAACGTT+GGG + Chr8:39902620-39902639 None:intergenic 30.0%
TCAAACTTTGAATTAGAGGT+GGG - Chr8:39905608-39905627 MsG0880044317.01.T01:intron 30.0%
TCATCTACCAAGTTTAATAG+TGG - Chr8:39902070-39902089 MsG0880044317.01.T01:intron 30.0%
TCTAACCATGGATATTGAAA+GGG - Chr8:39902745-39902764 MsG0880044317.01.T01:intron 30.0%
TGATAAAGAAAGAAGGATGA+GGG + Chr8:39903027-39903046 None:intergenic 30.0%
TGGGTTCTCTAATATTGTTT+GGG - Chr8:39905381-39905400 MsG0880044317.01.T01:intron 30.0%
TTACAATGCATTATCCGATT+AGG - Chr8:39903122-39903141 MsG0880044317.01.T01:intron 30.0%
TTCAAAAGCTTAAACAACGT+TGG + Chr8:39902621-39902640 None:intergenic 30.0%
TTCAAACTTTGAATTAGAGG+TGG - Chr8:39905607-39905626 MsG0880044317.01.T01:intron 30.0%
TTGAAACAAAATCGAGATCT+TGG + Chr8:39905203-39905222 None:intergenic 30.0%
TTGGGTTCTCTAATATTGTT+TGG - Chr8:39905380-39905399 MsG0880044317.01.T01:intron 30.0%
! CTTGTAATTTGAGCGAATTT+TGG - Chr8:39903990-39904009 MsG0880044317.01.T01:intron 30.0%
! TATACTTTTCCTCCAAAACT+TGG + Chr8:39902946-39902965 None:intergenic 30.0%
! TGTCTTTTCACTTGGTTAAA+GGG - Chr8:39906337-39906356 MsG0880044317.01.T01:intron 30.0%
! TTGTCTTTTCACTTGGTTAA+AGG - Chr8:39906336-39906355 MsG0880044317.01.T01:intron 30.0%
! TTTGCAACTAAACTTGTTTG+GGG - Chr8:39905539-39905558 MsG0880044317.01.T01:intron 30.0%
!! ATGATAAGTATCGAAACACT+TGG + Chr8:39906753-39906772 None:intergenic 30.0%
!! ATTTGCTTTGAAACCTACTT+TGG - Chr8:39903616-39903635 MsG0880044317.01.T01:intron 30.0%
!! CATTGATACCTAGCTTTTAA+GGG - Chr8:39906719-39906738 MsG0880044317.01.T01:intron 30.0%
!! CTCTAAAAGTTCCTTTTTAC+CGG + Chr8:39903892-39903911 None:intergenic 30.0%
!! GCAAGTTTTTCAATTATCTC+CGG + Chr8:39904495-39904514 None:intergenic 30.0%
!! GTTTTGGTGATAAAGAAAGA+AGG + Chr8:39903034-39903053 None:intergenic 30.0%
!! TACTACTTGTTGTGAAAATC+GGG + Chr8:39906658-39906677 None:intergenic 30.0%
!! TGATAAGTATCGAAACACTT+GGG + Chr8:39906752-39906771 None:intergenic 30.0%
!!! TCATGTTATTTCTCCTCTTT+TGG + Chr8:39902724-39902743 None:intergenic 30.0%
!!! TCTCGATTTTGTTTCAAGTT+TGG - Chr8:39905206-39905225 MsG0880044317.01.T01:intron 30.0%
AATAAACCCCTCCTATATGA+AGG - Chr8:39905568-39905587 MsG0880044317.01.T01:intron 35.0%
ACCAGTTCCACTATTAAACT+TGG + Chr8:39902080-39902099 None:intergenic 35.0%
ACTGGAATACCAAAACTGAA+GGG - Chr8:39901854-39901873 MsG0880044317.01.T01:CDS 35.0%
AGACAAATGTGAGCTTATAC+AGG + Chr8:39902306-39902325 None:intergenic 35.0%
ATAAACCCCTCCTATATGAA+GGG - Chr8:39905569-39905588 MsG0880044317.01.T01:intron 35.0%
ATAGTGCTATGATAGAGACT+TGG - Chr8:39906857-39906876 MsG0880044317.01.T01:intron 35.0%
ATCATGACTCTTGTTCCAAA+TGG - Chr8:39903748-39903767 MsG0880044317.01.T01:intron 35.0%
ATGCTAACATTATGTGATCG+AGG - Chr8:39907307-39907326 MsG0880044317.01.T01:CDS 35.0%
ATGTCAAAATGTACAGCTTG+AGG + Chr8:39906409-39906428 None:intergenic 35.0%
ATTAACCTGATGAAGAATGG+TGG + Chr8:39906259-39906278 None:intergenic 35.0%
ATTGAAAGATGGGAGCTTAA+AGG + Chr8:39902994-39903013 None:intergenic 35.0%
ATTGCAAATCTTCTTGTGGA+AGG - Chr8:39903390-39903409 MsG0880044317.01.T01:intron 35.0%
ATTGTGTGACTTTGTGTTGA+CGG + Chr8:39906064-39906083 None:intergenic 35.0%
CAAACAAAGTACAAGCGAAT+AGG + Chr8:39901953-39901972 None:intergenic 35.0%
CAAGTGAAAAGACAAATCCA+GGG + Chr8:39906331-39906350 None:intergenic 35.0%
CCACAAGAAGATTTGCAATA+TGG + Chr8:39903389-39903408 None:intergenic 35.0%
CCATATTGCAAATCTTCTTG+TGG - Chr8:39903386-39903405 MsG0880044317.01.T01:intron 35.0%
CCTTAAAAGCTAGGTATCAA+TGG + Chr8:39906721-39906740 None:intergenic 35.0%
CGATCATAATGCATAACCTA+TGG + Chr8:39904994-39905013 None:intergenic 35.0%
CGATTTATATAACCGACCTT+TGG - Chr8:39904380-39904399 MsG0880044317.01.T01:intron 35.0%
CGTTTGACAAATGTTCACTA+TGG + Chr8:39902783-39902802 None:intergenic 35.0%
CTTAAACAACGTTGGGTAAT+GGG + Chr8:39902613-39902632 None:intergenic 35.0%
GAAAACGTTACTGTATCAAC+AGG - Chr8:39902245-39902264 MsG0880044317.01.T01:intron 35.0%
GATAAAGAAAGAAGGATGAG+GGG + Chr8:39903026-39903045 None:intergenic 35.0%
GATGAAATGAGAAAGAACGA+AGG - Chr8:39906132-39906151 MsG0880044317.01.T01:intron 35.0%
GTACTAAGTACCTGATATTG+TGG - Chr8:39901978-39901997 MsG0880044317.01.T01:intron 35.0%
GTCATTCCAGCAAAATGTAA+GGG + Chr8:39903670-39903689 None:intergenic 35.0%
GTGATAAAGAAAGAAGGATG+AGG + Chr8:39903028-39903047 None:intergenic 35.0%
GTTGAACACTTTCAACCATT+TGG + Chr8:39903766-39903785 None:intergenic 35.0%
TAATATACTCATATACGGGC+CGG + Chr8:39905798-39905817 None:intergenic 35.0%
TAATTAAATCCCTTGCACCA+TGG - Chr8:39903794-39903813 MsG0880044317.01.T01:intron 35.0%
TACTGGAATACCAAAACTGA+AGG - Chr8:39901853-39901872 MsG0880044317.01.T01:CDS 35.0%
TAGAAACAACAACAATCGTG+CGG + Chr8:39905244-39905263 None:intergenic 35.0%
TAGTGAACATTTGTCAAACG+TGG - Chr8:39902783-39902802 MsG0880044317.01.T01:intron 35.0%
TAGTGCTATGATAGAGACTT+GGG - Chr8:39906858-39906877 MsG0880044317.01.T01:intron 35.0%
TCTCTCTCTCTTCACATAAT+TGG + Chr8:39904433-39904452 None:intergenic 35.0%
TGCATTATCCGATTAGGTTA+TGG - Chr8:39903128-39903147 MsG0880044317.01.T01:intron 35.0%
TTCAAAGTTTGAATGACCAG+GGG + Chr8:39905600-39905619 None:intergenic 35.0%
TTCGATTCTTGCAACTGATT+GGG - Chr8:39905356-39905375 MsG0880044317.01.T01:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG - Chr8:39904824-39904843 MsG0880044317.01.T01:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG + Chr8:39904843-39904824 None:intergenic 35.0%
TTGAAAGATGGGAGCTTAAA+GGG + Chr8:39902993-39903012 None:intergenic 35.0%
TTGATGCACAAAATTGAGGT+TGG - Chr8:39903282-39903301 MsG0880044317.01.T01:intron 35.0%
TTGCAAATCTTCTTGTGGAA+GGG - Chr8:39903391-39903410 MsG0880044317.01.T01:intron 35.0%
TTTCTTATAATAAGGACCGG+AGG - Chr8:39904823-39904842 MsG0880044317.01.T01:intron 35.0%
TTTCTTATAATAAGGACCGG+AGG + Chr8:39904842-39904823 None:intergenic 35.0%
TTTGAATTAGAGGTGGGAAT+AGG - Chr8:39905614-39905633 MsG0880044317.01.T01:intron 35.0%
! ACCAAGTTTAATAGTGGAAC+TGG - Chr8:39902076-39902095 MsG0880044317.01.T01:intron 35.0%
! AGATATCCAAAGCCTTTTCT+GGG + Chr8:39907383-39907402 None:intergenic 35.0%
! AGTTTAATAGTGGAACTGGT+TGG - Chr8:39902080-39902099 MsG0880044317.01.T01:intron 35.0%
! ATACAGTAACGTTTTCCTGT+GGG + Chr8:39902241-39902260 None:intergenic 35.0%
! CACAAAATTGAGGTTGGTTA+GGG - Chr8:39903288-39903307 MsG0880044317.01.T01:intron 35.0%
! CCTCAATTTTGTGCATCAAT+CGG + Chr8:39903281-39903300 None:intergenic 35.0%
! CTTACATTTTGCTGGAATGA+CGG - Chr8:39903669-39903688 MsG0880044317.01.T01:intron 35.0%
! CTTCAGATCAAACCAAGTTT+TGG - Chr8:39902931-39902950 MsG0880044317.01.T01:CDS 35.0%
! GAACAAGTTGAAACCAGAAT+CGG + Chr8:39906090-39906109 None:intergenic 35.0%
! GAACTTTCTCTTTCTGCTTT+TGG - Chr8:39906202-39906221 MsG0880044317.01.T01:intron 35.0%
! GTTTGTTAAGAGTAACGGTT+TGG + Chr8:39906018-39906037 None:intergenic 35.0%
! TAAAAGTTCCTTTTTACCGG+AGG + Chr8:39903889-39903908 None:intergenic 35.0%
! TCACATTTTTACCAATTGGC+TGG + Chr8:39902117-39902136 None:intergenic 35.0%
! TTCAAGTTTGGCTCAATCAT+TGG - Chr8:39905218-39905237 MsG0880044317.01.T01:intron 35.0%
!! ACATGGTATGATGGGTTAAA+TGG + Chr8:39904169-39904188 None:intergenic 35.0%
!! ATCGTACACAGTGGATTATA+TGG + Chr8:39904027-39904046 None:intergenic 35.0%
!! ATTCTGGTTTCAACTTGTTC+CGG - Chr8:39906090-39906109 MsG0880044317.01.T01:intron 35.0%
!! CCATTGATACCTAGCTTTTA+AGG - Chr8:39906718-39906737 MsG0880044317.01.T01:intron 35.0%
!! GATAAGTATCGAAACACTTG+GGG + Chr8:39906751-39906770 None:intergenic 35.0%
!! TGAATTTTGATCGTACACAG+TGG + Chr8:39904036-39904055 None:intergenic 35.0%
!!! TTTTAGAATAACGGTTTCCC+TGG - Chr8:39906311-39906330 MsG0880044317.01.T01:intron 35.0%
!!! TTTTTTTGGGTTCGCAATAG+TGG - Chr8:39907141-39907160 MsG0880044317.01.T01:intron 35.0%
AAACAGCACAGAGAACTTCT+TGG + Chr8:39902177-39902196 None:intergenic 40.0%
AAATGTACAGCTTGAGGAGT+CGG + Chr8:39906403-39906422 None:intergenic 40.0%
AACAACACATCTCTTGACTC+TGG - Chr8:39903702-39903721 MsG0880044317.01.T01:intron 40.0%
AAGTAGTATGAGATGCTCGA+TGG - Chr8:39906670-39906689 MsG0880044317.01.T01:intron 40.0%
AATTAGAGGTGGGAATAGGT+CGG - Chr8:39905618-39905637 MsG0880044317.01.T01:intron 40.0%
ACTAGAGAAATGGCATCAAG+TGG + Chr8:39907355-39907374 None:intergenic 40.0%
ACTGGTTGTAATCCAAAGGT+CGG + Chr8:39904395-39904414 None:intergenic 40.0%
AGAACTTACCGAAATTGCAG+AGG - Chr8:39904136-39904155 MsG0880044317.01.T01:intron 40.0%
AGTACGTGTTCGTAATCCAT+AGG - Chr8:39904975-39904994 MsG0880044317.01.T01:intron 40.0%
ATTACCCATTCTGTGTCAAC+CGG + Chr8:39906112-39906131 None:intergenic 40.0%
ATTTGTCGCATTGAGAACGA+CGG + Chr8:39905333-39905352 None:intergenic 40.0%
CAAAATGTAAGGGCCTAAGA+GGG + Chr8:39903660-39903679 None:intergenic 40.0%
CAAAGTAAAATGACGAAGGG+AGG + Chr8:39903067-39903086 None:intergenic 40.0%
CACTAATGGTGAAGACTTGA+AGG - Chr8:39903353-39903372 MsG0880044317.01.T01:intron 40.0%
CCAAGTGAAAAGACAAATCC+AGG + Chr8:39906332-39906351 None:intergenic 40.0%
CCAATTGGCTGGTAATAAGA+TGG + Chr8:39902106-39902125 None:intergenic 40.0%
CCATCTTATTACCAGCCAAT+TGG - Chr8:39902103-39902122 MsG0880044317.01.T01:intron 40.0%
CCGATTGATGCACAAAATTG+AGG - Chr8:39903278-39903297 MsG0880044317.01.T01:intron 40.0%
CGTCATTCCAGCAAAATGTA+AGG + Chr8:39903671-39903690 None:intergenic 40.0%
CTATAATGACCATCACATGG+AGG + Chr8:39903425-39903444 None:intergenic 40.0%
CTGCAATTTCGGTAAGTTCT+GGG + Chr8:39904136-39904155 None:intergenic 40.0%
GAACTTACCGAAATTGCAGA+GGG - Chr8:39904137-39904156 MsG0880044317.01.T01:intron 40.0%
GATTGTCTTGACAATGATGG+AGG - Chr8:39903223-39903242 MsG0880044317.01.T01:intron 40.0%
GCTCTATAATGACCATCACA+TGG + Chr8:39903428-39903447 None:intergenic 40.0%
GCTGTTGAAGATGTCACTAA+TGG - Chr8:39903339-39903358 MsG0880044317.01.T01:intron 40.0%
GCTTAAACAACGTTGGGTAA+TGG + Chr8:39902614-39902633 None:intergenic 40.0%
GGATTTCTCCCTTAAAAGCT+AGG + Chr8:39906730-39906749 None:intergenic 40.0%
GTGGTTTACTTGGATACCTA+TGG - Chr8:39907423-39907442 MsG0880044317.01.T01:intron 40.0%
GTGTGTCACAACATATGCAA+TGG + Chr8:39901885-39901904 None:intergenic 40.0%
GTGTTTACCCTCTGCAATTT+CGG + Chr8:39904147-39904166 None:intergenic 40.0%
GTTCGATTCTTGCAACTGAT+TGG - Chr8:39905355-39905374 MsG0880044317.01.T01:intron 40.0%
TCGAGATCTTGGATCTTGAA+TGG + Chr8:39905192-39905211 None:intergenic 40.0%
TCTGCAATTTCGGTAAGTTC+TGG + Chr8:39904137-39904156 None:intergenic 40.0%
TCTTGCAACTGATTGGGTTT+GGG - Chr8:39905362-39905381 MsG0880044317.01.T01:intron 40.0%
TGAAAGATGGGAGCTTAAAG+GGG + Chr8:39902992-39903011 None:intergenic 40.0%
TGACATTCTTCCCGATACTA+TGG + Chr8:39904249-39904268 None:intergenic 40.0%
TGAGGAGTCGGAAAAAACAA+AGG + Chr8:39906391-39906410 None:intergenic 40.0%
TGCATTATGATCGTGAATCC+AGG - Chr8:39905001-39905020 MsG0880044317.01.T01:intron 40.0%
TTAAGTATGTATTGTGCGGG+CGG - Chr8:39906566-39906585 MsG0880044317.01.T01:intron 40.0%
TTAGTATCAGACATGGTTGC+TGG - Chr8:39906773-39906792 MsG0880044317.01.T01:intron 40.0%
TTCTACTATGATACTCCCTC+CGG + Chr8:39904842-39904861 None:intergenic 40.0%
TTCTTGCAACTGATTGGGTT+TGG - Chr8:39905361-39905380 MsG0880044317.01.T01:intron 40.0%
! AAAATTGAGGTTGGTTAGGG+AGG - Chr8:39903291-39903310 MsG0880044317.01.T01:intron 40.0%
! ACTTCCTTGGTTTGAGCTTA+AGG + Chr8:39902365-39902384 None:intergenic 40.0%
! ATGGTAAGTCCCTTCAGTTT+TGG + Chr8:39901866-39901885 None:intergenic 40.0%
! CAGATATCCAAAGCCTTTTC+TGG + Chr8:39907384-39907403 None:intergenic 40.0%
! CCTGGATTTGTCTTTTCACT+TGG - Chr8:39906329-39906348 MsG0880044317.01.T01:intron 40.0%
! CTCGGACACATTTTTGATGA+TGG - Chr8:39902208-39902227 MsG0880044317.01.T01:intron 40.0%
! CTTCCTTGGTTTGAGCTTAA+GGG + Chr8:39902364-39902383 None:intergenic 40.0%
! GATACAGTAACGTTTTCCTG+TGG + Chr8:39902242-39902261 None:intergenic 40.0%
! GCACAAAATTGAGGTTGGTT+AGG - Chr8:39903287-39903306 MsG0880044317.01.T01:intron 40.0%
! GTTCGGTGGAGTATTTAAGT+GGG - Chr8:39906901-39906920 MsG0880044317.01.T01:intron 40.0%
! TAGTATCGGGAAGAATGTCA+AGG - Chr8:39904249-39904268 MsG0880044317.01.T01:intron 40.0%
! TGAAGACTTGAAGGTTTTGC+AGG - Chr8:39903362-39903381 MsG0880044317.01.T01:intron 40.0%
! TGCTCGATGGAGTATTTAAG+TGG - Chr8:39906683-39906702 MsG0880044317.01.T01:intron 40.0%
! TGTGACTGGTTGTAATCCAA+AGG + Chr8:39904399-39904418 None:intergenic 40.0%
! TGTTCGGTGGAGTATTTAAG+TGG - Chr8:39906900-39906919 MsG0880044317.01.T01:intron 40.0%
!! CAGATCAAACCAAGTTTTGG+AGG - Chr8:39902934-39902953 MsG0880044317.01.T01:CDS 40.0%
!! TTAGTTTGCCTCCGGTAAAA+AGG - Chr8:39903878-39903897 MsG0880044317.01.T01:intron 40.0%
!! TTGACAATGATGGAGGTGTT+TGG - Chr8:39903230-39903249 MsG0880044317.01.T01:intron 40.0%
AACACGATTGCTTGCGTTGT+TGG - Chr8:39905413-39905432 MsG0880044317.01.T01:intron 45.0%
AAGAATGGTGGTAGGGAATG+TGG + Chr8:39906247-39906266 None:intergenic 45.0%
AAGTGTTATGGGATGTTCGG+TGG - Chr8:39906887-39906906 MsG0880044317.01.T01:intron 45.0%
AATCTGCTTAGTGACGTTGC+AGG + Chr8:39904605-39904624 None:intergenic 45.0%
ACCTGATGAAGAATGGTGGT+AGG + Chr8:39906255-39906274 None:intergenic 45.0%
AGAGAAATGGCATCAAGTGG+TGG + Chr8:39907352-39907371 None:intergenic 45.0%
ATGTGAAGAGAGAGAGAGAG+AGG - Chr8:39904436-39904455 MsG0880044317.01.T01:intron 45.0%
ATTAGAGGTGGGAATAGGTC+GGG - Chr8:39905619-39905638 MsG0880044317.01.T01:intron 45.0%
CCTCAGCACCATAACCTAAT+CGG + Chr8:39903139-39903158 None:intergenic 45.0%
CCTGATGAAGAATGGTGGTA+GGG + Chr8:39906254-39906273 None:intergenic 45.0%
CGAGACCCTTTCAATATCCA+TGG + Chr8:39902753-39902772 None:intergenic 45.0%
CTTCCCTTAAGCTCAAACCA+AGG - Chr8:39902358-39902377 MsG0880044317.01.T01:intron 45.0%
GCAAAATGTAAGGGCCTAAG+AGG + Chr8:39903661-39903680 None:intergenic 45.0%
GCTGTTTGTGATGCTCATCT+CGG - Chr8:39902190-39902209 MsG0880044317.01.T01:intron 45.0%
GTTTAACCTCCTCCATGTGA+TGG - Chr8:39903413-39903432 MsG0880044317.01.T01:intron 45.0%
TAATGACCATCACATGGAGG+AGG + Chr8:39903422-39903441 None:intergenic 45.0%
TCCATGAATCATACTCCCTC+CGG - Chr8:39904689-39904708 MsG0880044317.01.T01:intron 45.0%
TGGACTGTTATACGTGTGAC+TGG + Chr8:39904413-39904432 None:intergenic 45.0%
TGTTCCGGTTGACACAGAAT+GGG - Chr8:39906105-39906124 MsG0880044317.01.T01:intron 45.0%
TTGTGCATCAATCGGTCATG+AGG + Chr8:39903273-39903292 None:intergenic 45.0%
TTGTTCCGGTTGACACAGAA+TGG - Chr8:39906104-39906123 MsG0880044317.01.T01:intron 45.0%
! ATGTGTCACTCAGAAGCAGA+TGG - Chr8:39902398-39902417 MsG0880044317.01.T01:intron 45.0%
! CTTAGGCCCTTACATTTTGC+TGG - Chr8:39903661-39903680 MsG0880044317.01.T01:intron 45.0%
! GGGAGGAGATGACATTGTTT+TGG + Chr8:39903050-39903069 None:intergenic 45.0%
! GTGACTTTGTGTTGACGGTT+TGG + Chr8:39906059-39906078 None:intergenic 45.0%
! TTATGCGTCGATGTTTGCTC+TGG - Chr8:39905164-39905183 MsG0880044317.01.T01:intron 45.0%
!! AGGGAGTGTTCTTGAAGTGT+CGG - Chr8:39906954-39906973 MsG0880044317.01.T01:intron 45.0%
!! ATTGATGATGCCAAGCTCCA+TGG + Chr8:39903814-39903833 None:intergenic 45.0%
!! CAATGATGGAGGTGTTTGGA+TGG - Chr8:39903234-39903253 MsG0880044317.01.T01:intron 45.0%
!! GCAGGATGGATTACCAAAGT+AGG + Chr8:39903632-39903651 None:intergenic 45.0%
!! GTCACACAATTCACCGATTC+TGG - Chr8:39906074-39906093 MsG0880044317.01.T01:intron 45.0%
!!! TGCGAGTTTTAGTTTGCCTC+CGG - Chr8:39903870-39903889 MsG0880044317.01.T01:intron 45.0%
!! TTTATTTAATCAAATATATA+TGG - Chr8:39902003-39902022 MsG0880044317.01.T01:intron 5.0%
!!! TTATCTTAATATTTTTTTTA+AGG - Chr8:39903519-39903538 MsG0880044317.01.T01:intron 5.0%
AGCACAGAGAACTTCTTGGC+GGG + Chr8:39902173-39902192 None:intergenic 50.0%
AGTCATGATACCACAGCACG+TGG + Chr8:39903737-39903756 None:intergenic 50.0%
ATGTCAAGGCCTACTGGACT+TGG - Chr8:39904263-39904282 MsG0880044317.01.T01:intron 50.0%
CAGCACAGAGAACTTCTTGG+CGG + Chr8:39902174-39902193 None:intergenic 50.0%
CCCTACCACCATTCTTCATC+AGG - Chr8:39906251-39906270 MsG0880044317.01.T01:intron 50.0%
CGTAGCCCTTCATATAGGAG+GGG + Chr8:39905577-39905596 None:intergenic 50.0%
CTCTAGTGCAAGCCCAGAAA+AGG - Chr8:39907368-39907387 MsG0880044317.01.T01:intron 50.0%
CTGGGCTTGCACTAGAGAAA+TGG + Chr8:39907365-39907384 None:intergenic 50.0%
GAGTGCAGCTGATGAGATGT+CGG - Chr8:39906826-39906845 MsG0880044317.01.T01:CDS 50.0%
GCACTCTACGACGCTTTACT+CGG + Chr8:39906812-39906831 None:intergenic 50.0%
GCCCTACTAAAAGTCTGGCT+CGG - Chr8:39905666-39905685 MsG0880044317.01.T01:intron 50.0%
GCCTATCAGACCTATCAAGC+CGG - Chr8:39905776-39905795 MsG0880044317.01.T01:intron 50.0%
GCGTAGCCCTTCATATAGGA+GGG + Chr8:39905578-39905597 None:intergenic 50.0%
GGAAGAATGTCAAGGCCTAC+TGG - Chr8:39904257-39904276 MsG0880044317.01.T01:intron 50.0%
GTATCAGACATGGTTGCTGG+CGG - Chr8:39906776-39906795 MsG0880044317.01.T01:intron 50.0%
TGCAAGCCCAGAAAAGGCTT+TGG - Chr8:39907374-39907393 MsG0880044317.01.T01:intron 50.0%
! AACGTTTTCCTGTGGGTGGA+GGG + Chr8:39902234-39902253 None:intergenic 50.0%
! ACCGGAGGGAGTATGATTCA+TGG + Chr8:39904693-39904712 None:intergenic 50.0%
! AGCCAGACTTTTAGTAGGGC+GGG + Chr8:39905666-39905685 None:intergenic 50.0%
! CAGTAACGTTTTCCTGTGGG+TGG + Chr8:39902238-39902257 None:intergenic 50.0%
! CCGATTAGGTTATGGTGCTG+AGG - Chr8:39903136-39903155 MsG0880044317.01.T01:intron 50.0%
! CTTTTAGTAGGGCGGGTCAT+AGG + Chr8:39905659-39905678 None:intergenic 50.0%
! GAGCCAGACTTTTAGTAGGG+CGG + Chr8:39905667-39905686 None:intergenic 50.0%
! GCCGAGCCAGACTTTTAGTA+GGG + Chr8:39905670-39905689 None:intergenic 50.0%
! GTGTTGTTATCCACGTGCTG+TGG - Chr8:39903724-39903743 MsG0880044317.01.T01:intron 50.0%
! TAACGTTTTCCTGTGGGTGG+AGG + Chr8:39902235-39902254 None:intergenic 50.0%
! TGTGTGTTCGCGAGTGTTGT+TGG - Chr8:39905266-39905285 MsG0880044317.01.T01:intron 50.0%
!! CGAAGGGTACTGTAAGCTGA+AGG - Chr8:39906149-39906168 MsG0880044317.01.T01:intron 50.0%
!! CTTCTGGAACCAAGTCCAGT+AGG + Chr8:39904275-39904294 None:intergenic 50.0%
!! TCGCGAGTGTTGTTGGTTCT+TGG - Chr8:39905273-39905292 MsG0880044317.01.T01:intron 50.0%
!! TGATGGAGGTGTTTGGATGG+AGG - Chr8:39903237-39903256 MsG0880044317.01.T01:intron 50.0%
AATAGGTCGGGCCGCTTGTT+AGG - Chr8:39905631-39905650 MsG0880044317.01.T01:intron 55.0%
ATCCCTTGCACCATGGAGCT+TGG - Chr8:39903801-39903820 MsG0880044317.01.T01:intron 55.0%
ATGCCAAGCTCCATGGTGCA+AGG + Chr8:39903807-39903826 None:intergenic 55.0%
CATCCTGCTGAAGCCCTCTT+AGG - Chr8:39903644-39903663 MsG0880044317.01.T01:intron 55.0%
CCTCCTGTTTGCGCTGAAAC+CGG + Chr8:39905982-39906001 None:intergenic 55.0%
CGGTTTCAGCGCAAACAGGA+GGG - Chr8:39905980-39905999 MsG0880044317.01.T01:intron 55.0%
CTAAGAGGGCTTCAGCAGGA+TGG + Chr8:39903646-39903665 None:intergenic 55.0%
CTGTTTGCGCTGAAACCGGA+CGG + Chr8:39905978-39905997 None:intergenic 55.0%
GACCCGCCCTACTAAAAGTC+TGG - Chr8:39905661-39905680 MsG0880044317.01.T01:intron 55.0%
GCACAGAGAACTTCTTGGCG+GGG + Chr8:39902172-39902191 None:intergenic 55.0%
GGCGTAGCCCTTCATATAGG+AGG + Chr8:39905579-39905598 None:intergenic 55.0%
GGTCATAGGCCCCTAACAAG+CGG + Chr8:39905645-39905664 None:intergenic 55.0%
TATATGAAGGGCTACGCCCC+TGG - Chr8:39905581-39905600 MsG0880044317.01.T01:intron 55.0%
TGCCAAGCTCCATGGTGCAA+GGG + Chr8:39903806-39903825 None:intergenic 55.0%
TTTCAGCGCAAACAGGAGGG+AGG - Chr8:39905983-39906002 MsG0880044317.01.T01:intron 55.0%
! AGGGGCGTAGCCCTTCATAT+AGG + Chr8:39905582-39905601 None:intergenic 55.0%
! ATAGGTCGGGCCGCTTGTTA+GGG - Chr8:39905632-39905651 MsG0880044317.01.T01:intron 55.0%
! GGCCGAGCCAGACTTTTAGT+AGG + Chr8:39905671-39905690 None:intergenic 55.0%
!! AGGGAGGCACTGTCGTAGTT+TGG - Chr8:39903307-39903326 MsG0880044317.01.T01:intron 55.0%
!! CATATACGGGCCGGCTTGAT+AGG + Chr8:39905789-39905808 None:intergenic 55.0%
!! CTGATGAGATGTCGGCTCTC+AGG - Chr8:39906834-39906853 MsG0880044317.01.T01:CDS 55.0%
!! GCCGGCTTGATAGGTCTGAT+AGG + Chr8:39905780-39905799 None:intergenic 55.0%
!! GGGAGGCACTGTCGTAGTTT+GGG - Chr8:39903308-39903327 MsG0880044317.01.T01:intron 55.0%
AAACCGGACGGAACACGCGT+AGG + Chr8:39905966-39905985 None:intergenic 60.0%
CAACCTACGCGTGTTCCGTC+CGG - Chr8:39905960-39905979 MsG0880044317.01.T01:intron 60.0%
CCGGTTTCAGCGCAAACAGG+AGG - Chr8:39905979-39905998 MsG0880044317.01.T01:intron 60.0%
CGTCCGGTTTCAGCGCAAAC+AGG - Chr8:39905976-39905995 MsG0880044317.01.T01:intron 60.0%
GGCACTGTCGTAGTTTGGGC+TGG - Chr8:39903312-39903331 MsG0880044317.01.T01:intron 60.0%
! TAGGTCGGGCCGCTTGTTAG+GGG - Chr8:39905633-39905652 MsG0880044317.01.T01:intron 60.0%
GGGCCTAAGAGGGCTTCAGC+AGG + Chr8:39903650-39903669 None:intergenic 65.0%
! GATGATGGCCCTCCACCCAC+AGG - Chr8:39902223-39902242 MsG0880044317.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 39901762 39907459 39901762 ID=MsG0880044317.01;Name=MsG0880044317.01
Chr8 mRNA 39901762 39907459 39901762 ID=MsG0880044317.01.T01;Parent=MsG0880044317.01;Name=MsG0880044317.01.T01;_AED=0.54;_eAED=0.69;_QI=0|0|0|0.85|0.33|0.28|7|0|295
Chr8 exon 39907450 39907459 39907450 ID=MsG0880044317.01.T01:exon:3189;Parent=MsG0880044317.01.T01
Chr8 exon 39907261 39907372 39907261 ID=MsG0880044317.01.T01:exon:3188;Parent=MsG0880044317.01.T01
Chr8 exon 39906965 39907152 39906965 ID=MsG0880044317.01.T01:exon:3187;Parent=MsG0880044317.01.T01
Chr8 exon 39906786 39906865 39906786 ID=MsG0880044317.01.T01:exon:3186;Parent=MsG0880044317.01.T01
Chr8 exon 39905809 39905912 39905809 ID=MsG0880044317.01.T01:exon:3185;Parent=MsG0880044317.01.T01
Chr8 exon 39902898 39903099 39902898 ID=MsG0880044317.01.T01:exon:3184;Parent=MsG0880044317.01.T01
Chr8 exon 39901762 39901953 39901762 ID=MsG0880044317.01.T01:exon:3183;Parent=MsG0880044317.01.T01
Chr8 CDS 39907450 39907459 39907450 ID=MsG0880044317.01.T01:cds;Parent=MsG0880044317.01.T01
Chr8 CDS 39907261 39907372 39907261 ID=MsG0880044317.01.T01:cds;Parent=MsG0880044317.01.T01
Chr8 CDS 39906965 39907152 39906965 ID=MsG0880044317.01.T01:cds;Parent=MsG0880044317.01.T01
Chr8 CDS 39906786 39906865 39906786 ID=MsG0880044317.01.T01:cds;Parent=MsG0880044317.01.T01
Chr8 CDS 39905809 39905912 39905809 ID=MsG0880044317.01.T01:cds;Parent=MsG0880044317.01.T01
Chr8 CDS 39902898 39903099 39902898 ID=MsG0880044317.01.T01:cds;Parent=MsG0880044317.01.T01
Chr8 CDS 39901762 39901953 39901762 ID=MsG0880044317.01.T01:cds;Parent=MsG0880044317.01.T01
Gene Sequence

>MsG0880044317.01.T01

ATGATTGCTGAGAGTACTGGAATACCAAAACTGAAGGGACTTACCATTGCATATGTTGTGACACACCCTTATTTGAGTAAGTACTTTTTGTATGCATGTATGTATGATACACCTATTCGCTTATCATCTACCAAGTTTAATAGTGGAACTGGTTGGCCATCTTATTACCAGCCAATTGGTAAAAATGTGAAATCAAAGCTAGATTTGTCAATTATATTCATGCCCCGCCAAGAAGTTCTCTGTGCTGTTTGTGATGCTCATCTCGGACACATTTTTGATGATGGCCCTCCACCCACAGGAAAACGTTACTTGCTTCCCTTAAGCTCAAACCAAGGAAGTAAGATAGTCAAATATGTGTCACTCAGAAGCAGATGGTTTAATATTAAAATGGGAGGCACTGTCGTAGTTTGGGCTGGTGACGCTGTTGAAGATGTCACTAATGGTGAAGACTTGAAGGTTTTGCAGGTCCATATTGCAAATCTTCTTGTGGAAGGAATGGGTAATGATGAAATGAGAAAGAACGAAGGGTACTGTAAGCTGAAGGATTTATGTTTGGATTTTGTTGAATATGATGGAACTTTCTCTTTCTGCTTTTGGATTTATCTCACTAAATCAACCACATTCCCTACCACCATTCTTCATCAGGTTAATCATTTTTCTCTTTCATTGTTTTTTTCGTTTCTTTTTAGAATAACGAATTTAGATTGGACCTTTGCTATTATATTTCTATCTATGATGCTAACATTATGTGATCGAGGCTGCGAAAATAACTCGAATCCACCACTTGATGCCATTTCTCTAGTGCAAGCCCAGAAAAGGCTTTGGATATCTGAGTATACCAATTTAGCATTGTGGTTTACTTGGATACCTATGGTTGAAAATTTGTAG

Protein sequence

>MsG0880044317.01.T01

MIAESTGIPKLKGLTIAYVVTHPYLSKYFLYACMYDTPIRLSSTKFNSGTGWPSYYQPIGKNVKSKLDLSIIFMPRQEVLCAVCDAHLGHIFDDGPPPTGKRYLLPLSSNQGSKIVKYVSLRSRWFNIKMGGTVVVWAGDAVEDVTNGEDLKVLQVHIANLLVEGMGNDEMRKNEGYCKLKDLCLDFVEYDGTFSFCFWIYLTKSTTFPTTILHQVNHFSLSLFFSFLFRITNLDWTFAIIFLSMMLTLCDRGCENNSNPPLDAISLVQAQKRLWISEYTNLALWFTWIPMVENL*