Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004064.01.T01 | XP_013468667.1 | 98.75 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 8.17E-109 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004064.01.T01 | I3SJZ9 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 3.90e-109 | 317 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048202.01 | MsG0180004064.01 | 0.819041 | 1.430006e-52 | 1.088459e-49 |
| MsG0080048738.01 | MsG0180004064.01 | 0.800558 | 1.362265e-48 | 6.362402e-46 |
| MsG0080048922.01 | MsG0180004064.01 | 0.840127 | 1.048362e-57 | 1.479075e-54 |
| MsG0080048933.01 | MsG0180004064.01 | 0.823389 | 1.422211e-53 | 1.222731e-50 |
| MsG0080049008.01 | MsG0180004064.01 | 0.810415 | 1.165787e-50 | 7.022713e-48 |
| MsG0080049023.01 | MsG0180004064.01 | -0.825740 | 3.974667e-54 | 3.654266e-51 |
| MsG0180000096.01 | MsG0180004064.01 | 0.902727 | 7.210585e-79 | 1.035216e-74 |
| MsG0180000118.01 | MsG0180004064.01 | 0.826321 | 2.892740e-54 | 2.703768e-51 |
| MsG0180000417.01 | MsG0180004064.01 | -0.813330 | 2.703891e-51 | 1.760541e-48 |
| MsG0180000466.01 | MsG0180004064.01 | 0.831380 | 1.724906e-55 | 1.868642e-52 |
| MsG0180000583.01 | MsG0180004064.01 | 0.801338 | 9.437427e-49 | 4.495643e-46 |
| MsG0180000719.01 | MsG0180004064.01 | -0.824060 | 9.902458e-54 | 8.676933e-51 |
| MsG0180000763.01 | MsG0180004064.01 | 0.808321 | 3.280679e-50 | 1.870125e-47 |
| MsG0180001054.01 | MsG0180004064.01 | -0.814427 | 1.548908e-51 | 1.039031e-48 |
| MsG0180001169.01 | MsG0180004064.01 | 0.912303 | 2.273718e-83 | 5.081983e-79 |
| MsG0180001588.01 | MsG0180004064.01 | 0.801854 | 7.397210e-49 | 3.570147e-46 |
| MsG0180001615.01 | MsG0180004064.01 | -0.835307 | 1.810981e-56 | 2.206144e-53 |
| MsG0180001829.01 | MsG0180004064.01 | 0.850937 | 1.229146e-60 | 2.447625e-57 |
| MsG0180001837.01 | MsG0180004064.01 | 0.909484 | 5.412443e-82 | 1.055304e-77 |
| MsG0180002021.01 | MsG0180004064.01 | -0.830713 | 2.515641e-55 | 2.671990e-52 |
| MsG0180002738.01 | MsG0180004064.01 | 0.809719 | 1.646867e-50 | 9.741839e-48 |
| MsG0180003238.01 | MsG0180004064.01 | 0.819352 | 1.214823e-52 | 9.325303e-50 |
| MsG0180003258.01 | MsG0180004064.01 | 0.859492 | 3.983126e-63 | 1.053908e-59 |
| MsG0180003351.01 | MsG0180004064.01 | -0.823589 | 1.276830e-53 | 1.104109e-50 |
| MsG0180003405.01 | MsG0180004064.01 | -0.826891 | 2.115356e-54 | 2.009804e-51 |
| MsG0180003503.01 | MsG0180004064.01 | -0.808984 | 2.366841e-50 | 1.372853e-47 |
| MsG0180003897.01 | MsG0180004064.01 | 0.821568 | 3.768451e-53 | 3.076984e-50 |
| MsG0180003905.01 | MsG0180004064.01 | 0.846933 | 1.591093e-59 | 2.782435e-56 |
| MsG0180004058.01 | MsG0180004064.01 | 0.841462 | 4.682868e-58 | 6.886313e-55 |
| MsG0180004064.01 | MsG0180004580.01 | -0.822947 | 1.803585e-53 | 1.531567e-50 |
| MsG0180004064.01 | MsG0180004581.01 | -0.830993 | 2.146750e-55 | 2.299113e-52 |
| MsG0180004064.01 | MsG0180004731.01 | -0.820871 | 5.453515e-53 | 4.367610e-50 |
| MsG0180004064.01 | MsG0180004737.01 | -0.830598 | 2.683583e-55 | 2.840624e-52 |
| MsG0180004064.01 | MsG0180004773.01 | -0.827538 | 1.480761e-54 | 1.433595e-51 |
| MsG0180004064.01 | MsG0180004787.01 | -0.806284 | 8.863408e-50 | 4.791991e-47 |
| MsG0180004064.01 | MsG0180005321.01 | 0.804098 | 2.542929e-49 | 1.299746e-46 |
| MsG0180004064.01 | MsG0180005474.01 | -0.805474 | 1.311632e-49 | 6.945707e-47 |
| MsG0180004064.01 | MsG0180005613.01 | -0.850104 | 2.106086e-60 | 4.080677e-57 |
| MsG0180004064.01 | MsG0180005666.01 | -0.811197 | 7.895666e-51 | 4.856448e-48 |
| MsG0180004064.01 | MsG0180005780.01 | 0.826787 | 2.239958e-54 | 2.121653e-51 |
| MsG0180004064.01 | MsG0180005819.01 | 0.816866 | 4.433656e-52 | 3.178712e-49 |
| MsG0180004064.01 | MsG0180005833.01 | -0.813677 | 2.267523e-51 | 1.490447e-48 |
| MsG0180004064.01 | MsG0180005839.01 | -0.832327 | 1.006929e-55 | 1.121650e-52 |
| MsG0180004064.01 | MsG0180005984.01 | 0.836662 | 8.206936e-57 | 1.041128e-53 |
| MsG0180004064.01 | MsG0180006239.01 | -0.815267 | 1.009234e-51 | 6.925440e-49 |
| MsG0180004064.01 | MsG0280006301.01 | 0.845012 | 5.293167e-59 | 8.701763e-56 |
| MsG0180004064.01 | MsG0280006717.01 | 0.840122 | 1.051541e-57 | 1.483325e-54 |
| MsG0180004064.01 | MsG0280006747.01 | 0.857921 | 1.174178e-62 | 2.945530e-59 |
| MsG0180004064.01 | MsG0280006880.01 | -0.813823 | 2.105610e-51 | 1.389483e-48 |
| MsG0180004064.01 | MsG0280007016.01 | -0.825461 | 4.629881e-54 | 4.222468e-51 |
| MsG0180004064.01 | MsG0280007017.01 | -0.800812 | 1.209172e-48 | 5.683631e-46 |
| MsG0180004064.01 | MsG0280007055.01 | 0.822803 | 1.948365e-53 | 1.647754e-50 |
| MsG0180004064.01 | MsG0280007084.01 | 0.918285 | 1.881175e-86 | 5.681866e-82 |
| MsG0180004064.01 | MsG0280007227.01 | 0.832254 | 1.049581e-55 | 1.166651e-52 |
| MsG0180004064.01 | MsG0280007248.01 | -0.806052 | 9.917272e-50 | 5.330223e-47 |
| MsG0180004064.01 | MsG0280007504.01 | 0.857314 | 1.776471e-62 | 4.366084e-59 |
| MsG0180004064.01 | MsG0280007505.01 | 0.843778 | 1.136417e-58 | 1.797003e-55 |
| MsG0180004064.01 | MsG0280007576.01 | -0.801642 | 8.177065e-49 | 3.925150e-46 |
| MsG0180004064.01 | MsG0280007606.01 | 0.819565 | 1.086364e-52 | 8.389700e-50 |
| MsG0180004064.01 | MsG0280007653.01 | -0.804299 | 2.309556e-49 | 1.186556e-46 |
| MsG0180004064.01 | MsG0280007995.01 | 0.852958 | 3.278987e-61 | 6.970741e-58 |
| MsG0180004064.01 | MsG0280008263.01 | 0.855122 | 7.795766e-62 | 1.780815e-58 |
| MsG0180004064.01 | MsG0280009079.01 | -0.829463 | 5.076773e-55 | 5.199697e-52 |
| MsG0180004064.01 | MsG0280009094.01 | -0.821965 | 3.050417e-53 | 2.518836e-50 |
| MsG0180004064.01 | MsG0280009287.01 | -0.804365 | 2.237414e-49 | 1.151452e-46 |
| MsG0180004064.01 | MsG0280009526.01 | 0.812254 | 4.650434e-51 | 2.942336e-48 |
| MsG0180004064.01 | MsG0280010606.01 | -0.803653 | 3.145598e-49 | 1.589453e-46 |
| MsG0180004064.01 | MsG0280010888.01 | 0.811176 | 7.980534e-51 | 4.905892e-48 |
| MsG0180004064.01 | MsG0280010994.01 | -0.819212 | 1.307347e-52 | 9.997380e-50 |
| MsG0180004064.01 | MsG0280011281.01 | -0.847740 | 9.548270e-60 | 1.713607e-56 |
| MsG0180004064.01 | MsG0280011372.01 | -0.818014 | 2.445416e-52 | 1.809163e-49 |
| MsG0180004064.01 | MsG0380012148.01 | -0.826535 | 2.572134e-54 | 2.418765e-51 |
| MsG0180004064.01 | MsG0380014231.01 | -0.829045 | 6.411160e-55 | 6.485693e-52 |
| MsG0180004064.01 | MsG0380014639.01 | -0.816406 | 5.621670e-52 | 3.979883e-49 |
| MsG0180004064.01 | MsG0380014735.01 | -0.801947 | 7.077774e-49 | 3.423891e-46 |
| MsG0180004064.01 | MsG0380015402.01 | 0.862565 | 4.632400e-64 | 1.362602e-60 |
| MsG0180004064.01 | MsG0380015446.01 | 0.856763 | 2.581523e-62 | 6.226903e-59 |
| MsG0180004064.01 | MsG0380015828.01 | -0.830900 | 2.262687e-55 | 2.416711e-52 |
| MsG0180004064.01 | MsG0380015857.01 | 0.875841 | 2.240781e-68 | 1.062356e-64 |
| MsG0180004064.01 | MsG0380016031.01 | 0.874694 | 5.527518e-68 | 2.511703e-64 |
| MsG0180004064.01 | MsG0380016096.01 | -0.825022 | 5.877784e-54 | 5.294799e-51 |
| MsG0180004064.01 | MsG0380016183.01 | 0.848761 | 4.989056e-60 | 9.252220e-57 |
| MsG0180004064.01 | MsG0380016653.01 | 0.829485 | 5.014980e-55 | 5.139528e-52 |
| MsG0180004064.01 | MsG0380016744.01 | 0.829996 | 3.765267e-55 | 3.916713e-52 |
| MsG0180004064.01 | MsG0380016760.01 | 0.877731 | 4.968034e-69 | 2.525352e-65 |
| MsG0180004064.01 | MsG0380016861.01 | -0.811935 | 5.457217e-51 | 3.422696e-48 |
| MsG0180004064.01 | MsG0380017155.01 | 0.817764 | 2.784013e-52 | 2.045728e-49 |
| MsG0180004064.01 | MsG0380017156.01 | 0.835946 | 1.247910e-56 | 1.549350e-53 |
| MsG0180004064.01 | MsG0380017385.01 | -0.840555 | 8.102125e-58 | 1.158296e-54 |
| MsG0180004064.01 | MsG0380017483.01 | 0.821170 | 4.655909e-53 | 3.759703e-50 |
| MsG0180004064.01 | MsG0380017588.01 | 0.826487 | 2.641248e-54 | 2.480341e-51 |
| MsG0180004064.01 | MsG0380017695.01 | 0.813632 | 2.320229e-51 | 1.523202e-48 |
| MsG0180004064.01 | MsG0380017812.01 | -0.823085 | 1.674304e-53 | 1.427435e-50 |
| MsG0180004064.01 | MsG0380017826.01 | 0.841491 | 4.600387e-58 | 6.771100e-55 |
| MsG0180004064.01 | MsG0380017928.01 | -0.809080 | 2.257744e-50 | 1.312978e-47 |
| MsG0180004064.01 | MsG0380018035.01 | -0.815534 | 8.800192e-52 | 6.083440e-49 |
| MsG0180004064.01 | MsG0480018201.01 | -0.816550 | 5.219642e-52 | 3.709714e-49 |
| MsG0180004064.01 | MsG0480018202.01 | -0.820372 | 7.100577e-53 | 5.608336e-50 |
| MsG0180004064.01 | MsG0480018203.01 | -0.821464 | 3.981229e-53 | 3.241232e-50 |
| MsG0180004064.01 | MsG0480018486.01 | 0.821814 | 3.305013e-53 | 2.717650e-50 |
| MsG0180004064.01 | MsG0480019046.01 | -0.805627 | 1.218515e-49 | 6.478008e-47 |
| MsG0180004064.01 | MsG0480019165.01 | 0.817000 | 4.137976e-52 | 2.977718e-49 |
| MsG0180004064.01 | MsG0480019171.01 | 0.821361 | 4.205872e-53 | 3.414291e-50 |
| MsG0180004064.01 | MsG0480020928.01 | 0.855889 | 4.658688e-62 | 1.091755e-58 |
| MsG0180004064.01 | MsG0480021279.01 | 0.830531 | 2.786453e-55 | 2.943615e-52 |
| MsG0180004064.01 | MsG0480021417.01 | 0.803046 | 4.201903e-49 | 2.090345e-46 |
| MsG0180004064.01 | MsG0480022002.01 | -0.835092 | 2.052170e-56 | 2.483280e-53 |
| MsG0180004064.01 | MsG0480022006.01 | 0.869212 | 3.667795e-66 | 1.365259e-62 |
| MsG0180004064.01 | MsG0480022302.01 | 0.827100 | 1.884580e-54 | 1.801463e-51 |
| MsG0180004064.01 | MsG0480022411.01 | -0.805461 | 1.320436e-49 | 6.990076e-47 |
| MsG0180004064.01 | MsG0480022789.01 | 0.816919 | 4.314083e-52 | 3.097406e-49 |
| MsG0180004064.01 | MsG0480022968.01 | 0.870273 | 1.652277e-66 | 6.389692e-63 |
| MsG0180004064.01 | MsG0480023152.01 | -0.812343 | 4.446025e-51 | 2.819777e-48 |
| MsG0180004064.01 | MsG0480023211.01 | -0.827237 | 1.748187e-54 | 1.677882e-51 |
| MsG0180004064.01 | MsG0480023242.01 | -0.822660 | 2.103783e-53 | 1.772066e-50 |
| MsG0180004064.01 | MsG0480023244.01 | -0.810370 | 1.192355e-50 | 7.174303e-48 |
| MsG0180004064.01 | MsG0480023380.01 | 0.825787 | 3.874757e-54 | 3.567228e-51 |
| MsG0180004064.01 | MsG0480023386.01 | -0.824352 | 8.454738e-54 | 7.469964e-51 |
| MsG0180004064.01 | MsG0480023469.01 | -0.800449 | 1.433961e-48 | 6.678661e-46 |
| MsG0180004064.01 | MsG0480023575.01 | 0.805907 | 1.064193e-49 | 5.698425e-47 |
| MsG0180004064.01 | MsG0480023663.01 | 0.810942 | 8.967469e-51 | 5.479174e-48 |
| MsG0180004064.01 | MsG0480023774.01 | 0.866605 | 2.524031e-65 | 8.557451e-62 |
| MsG0180004064.01 | MsG0480023851.01 | -0.810689 | 1.017333e-50 | 6.173669e-48 |
| MsG0180004064.01 | MsG0480023925.01 | 0.848359 | 6.445972e-60 | 1.179894e-56 |
| MsG0180004064.01 | MsG0480023931.01 | 0.855728 | 5.191439e-62 | 1.210209e-58 |
| MsG0180004064.01 | MsG0480023996.01 | 0.811177 | 7.975517e-51 | 4.902972e-48 |
| MsG0180004064.01 | MsG0580024481.01 | 0.813705 | 2.235897e-51 | 1.470771e-48 |
| MsG0180004064.01 | MsG0580024738.01 | 0.830967 | 2.179075e-55 | 2.331899e-52 |
| MsG0180004064.01 | MsG0580025447.01 | -0.814439 | 1.539701e-51 | 1.033179e-48 |
| MsG0180004064.01 | MsG0580025633.01 | 0.814747 | 1.315927e-51 | 8.903486e-49 |
| MsG0180004064.01 | MsG0580026029.01 | 0.881816 | 1.751831e-70 | 1.041253e-66 |
| MsG0180004064.01 | MsG0580026343.01 | 0.819862 | 9.291544e-53 | 7.235407e-50 |
| MsG0180004064.01 | MsG0580026446.01 | 0.831713 | 1.428448e-55 | 1.562998e-52 |
| MsG0180004064.01 | MsG0580027135.01 | 0.827858 | 1.240217e-54 | 1.212110e-51 |
| MsG0180004064.01 | MsG0580027276.01 | -0.820650 | 6.133303e-53 | 4.881079e-50 |
| MsG0180004064.01 | MsG0580028041.01 | 0.802894 | 4.516908e-49 | 2.238495e-46 |
| MsG0180004064.01 | MsG0580028159.01 | -0.858282 | 9.167760e-63 | 2.327616e-59 |
| MsG0180004064.01 | MsG0680030878.01 | -0.818054 | 2.394654e-52 | 1.773539e-49 |
| MsG0180004064.01 | MsG0680031204.01 | -0.809128 | 2.205011e-50 | 1.284012e-47 |
| MsG0180004064.01 | MsG0680034383.01 | -0.808214 | 3.457658e-50 | 1.965445e-47 |
| MsG0180004064.01 | MsG0680035584.01 | -0.800187 | 1.621026e-48 | 7.499888e-46 |
| MsG0180004064.01 | MsG0680035611.01 | 0.852481 | 4.487695e-61 | 9.389973e-58 |
| MsG0180004064.01 | MsG0780036859.01 | 0.826022 | 3.406550e-54 | 3.157187e-51 |
| MsG0180004064.01 | MsG0780037458.01 | -0.838977 | 2.086431e-57 | 2.840831e-54 |
| MsG0180004064.01 | MsG0780037999.01 | 0.875821 | 2.276775e-68 | 1.078646e-64 |
| MsG0180004064.01 | MsG0780038383.01 | 0.817153 | 3.821723e-52 | 2.761591e-49 |
| MsG0180004064.01 | MsG0780038431.01 | 0.827306 | 1.682889e-54 | 1.618487e-51 |
| MsG0180004064.01 | MsG0780039234.01 | 0.817575 | 3.070997e-52 | 2.244808e-49 |
| MsG0180004064.01 | MsG0780039287.01 | -0.810205 | 1.293933e-50 | 7.751744e-48 |
| MsG0180004064.01 | MsG0780039937.01 | 0.836590 | 8.557330e-57 | 1.083287e-53 |
| MsG0180004064.01 | MsG0780040154.01 | -0.813657 | 2.291234e-51 | 1.505186e-48 |
| MsG0180004064.01 | MsG0780040660.01 | 0.837968 | 3.799271e-57 | 5.016653e-54 |
| MsG0180004064.01 | MsG0780040877.01 | 0.848143 | 7.392682e-60 | 1.343589e-56 |
| MsG0180004064.01 | MsG0780040978.01 | 0.837416 | 5.266196e-57 | 6.835732e-54 |
| MsG0180004064.01 | MsG0780040990.01 | 0.800551 | 1.366623e-48 | 6.381646e-46 |
| MsG0180004064.01 | MsG0780041076.01 | 0.836917 | 7.065614e-57 | 9.032985e-54 |
| MsG0180004064.01 | MsG0780041240.01 | 0.836597 | 8.525779e-57 | 1.079497e-53 |
| MsG0180004064.01 | MsG0780041436.01 | 0.812036 | 5.187269e-51 | 3.262330e-48 |
| MsG0180004064.01 | MsG0780041522.01 | 0.809425 | 1.904105e-50 | 1.117598e-47 |
| MsG0180004064.01 | MsG0780041591.01 | 0.818695 | 1.714061e-52 | 1.292131e-49 |
| MsG0180004064.01 | MsG0880043031.01 | 0.805819 | 1.110154e-49 | 5.931321e-47 |
| MsG0180004064.01 | MsG0880043076.01 | 0.810973 | 8.830323e-51 | 5.399949e-48 |
| MsG0180004064.01 | MsG0880043472.01 | 0.843982 | 1.002039e-58 | 1.594802e-55 |
| MsG0180004064.01 | MsG0880043515.01 | -0.828481 | 8.778430e-55 | 8.736414e-52 |
| MsG0180004064.01 | MsG0880044318.01 | -0.813354 | 2.671359e-51 | 1.740535e-48 |
| MsG0180004064.01 | MsG0880044342.01 | 0.848684 | 5.239872e-60 | 9.693218e-57 |
| MsG0180004064.01 | MsG0880044548.01 | -0.819826 | 9.471893e-53 | 7.368376e-50 |
| MsG0180004064.01 | MsG0880044968.01 | -0.831943 | 1.253104e-55 | 1.380438e-52 |
| MsG0180004064.01 | MsG0880045356.01 | 0.813531 | 2.441621e-51 | 1.598594e-48 |
| MsG0180004064.01 | MsG0880045400.01 | -0.805774 | 1.135082e-49 | 6.057415e-47 |
| MsG0180004064.01 | MsG0880045411.01 | -0.805365 | 1.382894e-49 | 7.302520e-47 |
| MsG0180004064.01 | MsG0880045725.01 | 0.841556 | 4.422448e-58 | 6.522488e-55 |
| MsG0180004064.01 | MsG0880045761.01 | -0.859160 | 5.011141e-63 | 1.310813e-59 |
| MsG0180004064.01 | MsG0880045836.01 | 0.806348 | 8.593970e-50 | 4.653770e-47 |
| MsG0180004064.01 | MsG0880046010.01 | -0.857703 | 1.362613e-62 | 3.393132e-59 |
| MsG0180004064.01 | MsG0880046080.01 | 0.830797 | 2.398672e-55 | 2.554065e-52 |
| MsG0180004064.01 | MsG0880046189.01 | -0.801248 | 9.849555e-49 | 4.681289e-46 |
| MsG0180004064.01 | MsG0880046341.01 | -0.810750 | 9.866702e-51 | 5.997514e-48 |
| MsG0180004064.01 | MsG0880046486.01 | 0.882033 | 1.462091e-70 | 8.767019e-67 |
| MsG0180004064.01 | MsG0880047090.01 | 0.864185 | 1.458179e-64 | 4.537906e-61 |
| MsG0180004064.01 | MsG0880047249.01 | 0.802876 | 4.556021e-49 | 2.256796e-46 |
| MsG0180004064.01 | MsG0880047310.01 | 0.806365 | 8.523428e-50 | 4.617512e-47 |
| MsG0180004064.01 | MsG0880047343.01 | -0.800584 | 1.345846e-48 | 6.289884e-46 |
| MsG0180004064.01 | MsG0880047704.01 | 0.802785 | 4.758488e-49 | 2.351715e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180004064.01 | MsG0780040721.01 | PPI |
| MsG0180004064.01 | MsG0780040722.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004064.01.T01 | MTR_1g073940 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 9.90e-113 | 317 |
| MsG0180004064.01.T01 | MTR_1g073940 | 89.474 | 152 | 16 | 0 | 9 | 160 | 24 | 175 | 2.83e-96 | 276 |
| MsG0180004064.01.T01 | MTR_1g070190 | 53.947 | 152 | 67 | 1 | 1 | 152 | 1 | 149 | 3.98e-49 | 155 |
| MsG0180004064.01.T01 | MTR_7g096640 | 54.362 | 149 | 65 | 1 | 1 | 149 | 1 | 146 | 4.79e-48 | 153 |
| MsG0180004064.01.T01 | MTR_7g096640 | 45.918 | 98 | 50 | 1 | 1 | 98 | 1 | 95 | 2.06e-21 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004064.01.T01 | AT5G43460 | 65.625 | 160 | 47 | 3 | 1 | 159 | 1 | 153 | 2.41e-66 | 199 |
| MsG0180004064.01.T01 | AT5G43460 | 65.625 | 160 | 47 | 3 | 1 | 159 | 1 | 153 | 2.41e-66 | 199 |
| MsG0180004064.01.T01 | AT1G04340 | 59.627 | 161 | 60 | 2 | 1 | 159 | 1 | 158 | 3.25e-62 | 189 |
| MsG0180004064.01.T01 | AT4G14420 | 51.875 | 160 | 73 | 2 | 1 | 159 | 1 | 157 | 5.68e-44 | 142 |
| MsG0180004064.01.T01 | AT3G23180 | 31.304 | 115 | 63 | 1 | 7 | 121 | 24 | 122 | 2.89e-14 | 67.8 |
| MsG0180004064.01.T01 | AT3G23180 | 31.304 | 115 | 63 | 1 | 7 | 121 | 24 | 122 | 2.89e-14 | 67.8 |
| MsG0180004064.01.T01 | AT3G23190 | 36.441 | 118 | 55 | 2 | 8 | 125 | 25 | 122 | 3.64e-13 | 65.1 |
Find 50 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATAATATTTGATTTAAC+TGG | 0.229790 | 1:+72713261 | None:intergenic |
| TAATCGGCACAATTTGATTA+TGG | 0.247158 | 1:-72713422 | MsG0180004064.01.T01:three_prime_UTR |
| TGTAGAAATCATACAGAATA+GGG | 0.299080 | 1:+72713768 | None:intergenic |
| GTTGCTAAATGAGTTCATTC+AGG | 0.313701 | 1:-72713714 | MsG0180004064.01.T01:intron |
| AATGGGGTTCTTCTCCTTCA+TGG | 0.331747 | 1:-72715259 | MsG0180004064.01.T01:CDS |
| ACATAAGTTGCGTTAAAATC+TGG | 0.340201 | 1:+72714137 | None:intergenic |
| ATCAAATATTATATGATGTC+CGG | 0.350936 | 1:-72713253 | MsG0180004064.01.T01:three_prime_UTR |
| TTTGTGTTTGGCAGCACGTT+TGG | 0.363466 | 1:-72713966 | MsG0180004064.01.T01:CDS |
| TTTAGCAACAAACCGTATTC+CGG | 0.367251 | 1:+72713728 | None:intergenic |
| GGGAATCAATTCCTTTGAAA+AGG | 0.377676 | 1:+72714211 | None:intergenic |
| TTCCTCAAAATCGTGAGCTT+GGG | 0.400618 | 1:+72714191 | None:intergenic |
| GGAGGAATTCTATTTGTGTT+TGG | 0.403655 | 1:-72713978 | MsG0180004064.01.T01:CDS |
| ATTGTTGTGTTGCTATGTTT+TGG | 0.404036 | 1:-72713460 | MsG0180004064.01.T01:three_prime_UTR |
| TTTCCTCAAAATCGTGAGCT+TGG | 0.406891 | 1:+72714190 | None:intergenic |
| GCTCTCGGTCACTGTGTTGC+TGG | 0.408141 | 1:+72715299 | None:intergenic |
| ATCATATTTCTCAAGGGAGT+TGG | 0.422933 | 1:-72713999 | MsG0180004064.01.T01:CDS |
| TCAAATATTATATGATGTCC+GGG | 0.433479 | 1:-72713252 | MsG0180004064.01.T01:three_prime_UTR |
| ACTTATGTAGCTTTCACATC+TGG | 0.433495 | 1:-72713801 | MsG0180004064.01.T01:intron |
| TTGTAGAAATCATACAGAAT+AGG | 0.434912 | 1:+72713767 | None:intergenic |
| TGTGTCTGTTTACTAAGAAC+AGG | 0.440592 | 1:-72713490 | MsG0180004064.01.T01:three_prime_UTR |
| GGAATCAATTCCTTTGAAAA+GGG | 0.450002 | 1:+72714212 | None:intergenic |
| CACGTTTGGATCCTTTCTCT+TGG | 0.450868 | 1:-72713952 | MsG0180004064.01.T01:intron |
| GGCACAATTTGATTATGGAT+TGG | 0.463449 | 1:-72713417 | MsG0180004064.01.T01:three_prime_UTR |
| ATGGGGTTCTTCTCCTTCAT+GGG | 0.477665 | 1:-72715258 | MsG0180004064.01.T01:CDS |
| AAACCGTATTCCGGCTTAGT+AGG | 0.480706 | 1:+72713737 | None:intergenic |
| TGCCACTATCATATTTCTCA+AGG | 0.486755 | 1:-72714006 | MsG0180004064.01.T01:CDS |
| AAAATTTATCCTCCAAATTG+GGG | 0.503296 | 1:-72714169 | MsG0180004064.01.T01:CDS |
| TCCCTTGAGAAATATGATAG+TGG | 0.507226 | 1:+72714004 | None:intergenic |
| GGAAGCATTTACCAAGAGAA+AGG | 0.510396 | 1:+72713941 | None:intergenic |
| TTTAATGAATTTGATGCCAC+TGG | 0.511159 | 1:-72714239 | MsG0180004064.01.T01:CDS |
| ATATTTCTCAAGGGAGTTGG+AGG | 0.516522 | 1:-72713996 | MsG0180004064.01.T01:CDS |
| CCCTCTTCATCCTCTCCGCA+TGG | 0.518155 | 1:-72715218 | MsG0180004064.01.T01:CDS |
| AAAGAGAACACGGCCCATGA+AGG | 0.535203 | 1:+72715245 | None:intergenic |
| GAACTGAATAAAACATTGCA+AGG | 0.549559 | 1:+72713307 | None:intergenic |
| AGACCTACTAAGCCGGAATA+CGG | 0.551495 | 1:-72713740 | MsG0180004064.01.T01:CDS |
| TTACGATTCTGTTGTACTTG+CGG | 0.554679 | 1:-72713376 | MsG0180004064.01.T01:three_prime_UTR |
| CAACTATAGACCTACTAAGC+CGG | 0.570920 | 1:-72713747 | MsG0180004064.01.T01:CDS |
| GCCATGCGGAGAGGATGAAG+AGG | 0.600238 | 1:+72715217 | None:intergenic |
| GCCACTATCATATTTCTCAA+GGG | 0.605942 | 1:-72714005 | MsG0180004064.01.T01:CDS |
| AATGAATTTGATGCCACTGG+TGG | 0.607390 | 1:-72714236 | MsG0180004064.01.T01:CDS |
| AGAGGGAAGCAAAGAGAACA+CGG | 0.609383 | 1:+72715235 | None:intergenic |
| CTTTGAAAAGGGTCCACCAG+TGG | 0.612462 | 1:+72714223 | None:intergenic |
| CAATTCCCAGAAAACAGTTG+AGG | 0.642642 | 1:-72713557 | MsG0180004064.01.T01:CDS |
| CCATGCGGAGAGGATGAAGA+GGG | 0.643032 | 1:+72715218 | None:intergenic |
| GTAGAAATCATACAGAATAG+GGG | 0.645008 | 1:+72713769 | None:intergenic |
| CTGACATCTGCCATGCGGAG+AGG | 0.666177 | 1:+72715208 | None:intergenic |
| AGATTTACTCTATAATACCC+CGG | 0.674377 | 1:+72713234 | None:intergenic |
| CAAATATTATATGATGTCCG+GGG | 0.676792 | 1:-72713251 | MsG0180004064.01.T01:three_prime_UTR |
| AAATTTATCCTCCAAATTGG+GGG | 0.685692 | 1:-72714168 | MsG0180004064.01.T01:CDS |
| GAGAACTGACATCTGCCATG+CGG | 0.716281 | 1:+72715203 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATTTCAAGATTTCAT+TGG | + | Chr1:72713708-72713727 | None:intergenic | 15.0% |
| !!! | CATATAATATTTGATTTAAC+TGG | + | Chr1:72715315-72715334 | None:intergenic | 15.0% |
| !! | AAAAATTTATCCTCCAAATT+GGG | - | Chr1:72714403-72714422 | MsG0180004064.01.T01:intron | 20.0% |
| !! | ATCAAATATTATATGATGTC+CGG | - | Chr1:72715320-72715339 | MsG0180004064.01.T01:five_prime_UTR | 20.0% |
| !! | ATTGAAAAAAGCAACTTAAA+AGG | + | Chr1:72713753-72713772 | None:intergenic | 20.0% |
| !! | TAAATTATGCTTTACTTGTT+GGG | - | Chr1:72713619-72713638 | MsG0180004064.01.T01:intron | 20.0% |
| !! | TTAAATTATGCTTTACTTGT+TGG | - | Chr1:72713618-72713637 | MsG0180004064.01.T01:intron | 20.0% |
| !!! | ATTTGTTACATAGATTTGTT+AGG | - | Chr1:72713867-72713886 | MsG0180004064.01.T01:intron | 20.0% |
| !!! | TCTAATAATGTGTTTACTTT+TGG | - | Chr1:72714938-72714957 | MsG0180004064.01.T01:intron | 20.0% |
| !!! | TTCATATTTTGATATTCTTC+TGG | - | Chr1:72714709-72714728 | MsG0180004064.01.T01:intron | 20.0% |
| !!! | TTGCTTTTTTCAATTTATTG+AGG | - | Chr1:72713759-72713778 | MsG0180004064.01.T01:CDS | 20.0% |
| !!! | TTTGTTACATAGATTTGTTA+GGG | - | Chr1:72713868-72713887 | MsG0180004064.01.T01:intron | 20.0% |
| ! | AAAATTTATCCTCCAAATTG+GGG | - | Chr1:72714404-72714423 | MsG0180004064.01.T01:intron | 25.0% |
| ! | AAACGGAAAAAAGATAAAAG+TGG | + | Chr1:72713443-72713462 | None:intergenic | 25.0% |
| ! | ATAGAATTTATGTTGTTGCT+AGG | - | Chr1:72714311-72714330 | MsG0180004064.01.T01:intron | 25.0% |
| ! | ATTGCTATGATATAATGTCT+TGG | - | Chr1:72714079-72714098 | MsG0180004064.01.T01:intron | 25.0% |
| ! | GAAAAATTTATCCTCCAAAT+TGG | - | Chr1:72714402-72714421 | MsG0180004064.01.T01:intron | 25.0% |
| ! | GAATGAATAGACATAGATAT+TGG | - | Chr1:72714668-72714687 | MsG0180004064.01.T01:intron | 25.0% |
| ! | GCATAAAAACGGAAATAAAA+CGG | + | Chr1:72713460-72713479 | None:intergenic | 25.0% |
| ! | TAGAGAGAGAAAACAAAAAT+GGG | - | Chr1:72713297-72713316 | MsG0180004064.01.T01:three_prime_UTR | 25.0% |
| ! | TCAAATATTATATGATGTCC+GGG | - | Chr1:72715321-72715340 | MsG0180004064.01.T01:five_prime_UTR | 25.0% |
| ! | TGTAGAAATCATACAGAATA+GGG | + | Chr1:72714808-72714827 | None:intergenic | 25.0% |
| ! | TTATTTCCATAAAACTCTCT+AGG | + | Chr1:72713906-72713925 | None:intergenic | 25.0% |
| ! | TTGTAGAAATCATACAGAAT+AGG | + | Chr1:72714809-72714828 | None:intergenic | 25.0% |
| !! | AACAAAAGTATATGCTACAT+AGG | + | Chr1:72714229-72714248 | None:intergenic | 25.0% |
| !! | TATTATCCTAGAGAGTTTTA+TGG | - | Chr1:72713897-72713916 | MsG0180004064.01.T01:intron | 25.0% |
| !!! | GAATGGTTGTTTTTGTTAAT+CGG | - | Chr1:72715135-72715154 | MsG0180004064.01.T01:intron | 25.0% |
| !!! | TTTAACTGTGTTTTGAAATC+TGG | - | Chr1:72713808-72713827 | MsG0180004064.01.T01:intron | 25.0% |
| AAAACCCAGATGCATAAAAA+CGG | + | Chr1:72713471-72713490 | None:intergenic | 30.0% | |
| AAATTTATCCTCCAAATTGG+GGG | - | Chr1:72714405-72714424 | MsG0180004064.01.T01:intron | 30.0% | |
| AATCTTTGCACAAATGCATA+CGG | + | Chr1:72714038-72714057 | None:intergenic | 30.0% | |
| ACAGTTACAAGTAAGATTTG+TGG | + | Chr1:72713516-72713535 | None:intergenic | 30.0% | |
| ACATAAGTTGCGTTAAAATC+TGG | + | Chr1:72714439-72714458 | None:intergenic | 30.0% | |
| AGAATCACAAGTAAAAATCG+AGG | + | Chr1:72714507-72714526 | None:intergenic | 30.0% | |
| AGAGAGAGAAAACAAAAATG+GGG | - | Chr1:72713298-72713317 | MsG0180004064.01.T01:three_prime_UTR | 30.0% | |
| AGATTTACTCTATAATACCC+CGG | + | Chr1:72715342-72715361 | None:intergenic | 30.0% | |
| CAAATATTATATGATGTCCG+GGG | - | Chr1:72715322-72715341 | MsG0180004064.01.T01:five_prime_UTR | 30.0% | |
| CAGTTACAAGTAAGATTTGT+GGG | + | Chr1:72713515-72713534 | None:intergenic | 30.0% | |
| CATCTTATTAGTGATGAGTT+AGG | - | Chr1:72713537-72713556 | MsG0180004064.01.T01:CDS | 30.0% | |
| CTAATTGGAATGTTTCATAC+AGG | - | Chr1:72714531-72714550 | MsG0180004064.01.T01:intron | 30.0% | |
| CTAGAGAGAGAAAACAAAAA+TGG | - | Chr1:72713296-72713315 | MsG0180004064.01.T01:three_prime_UTR | 30.0% | |
| CTTGTGATTCTCTTTCTAAT+TGG | - | Chr1:72714516-72714535 | MsG0180004064.01.T01:intron | 30.0% | |
| GAACTGAATAAAACATTGCA+AGG | + | Chr1:72715269-72715288 | None:intergenic | 30.0% | |
| GTAGAAATCATACAGAATAG+GGG | + | Chr1:72714807-72714826 | None:intergenic | 30.0% | |
| TAATCGGCACAATTTGATTA+TGG | - | Chr1:72715151-72715170 | MsG0180004064.01.T01:intron | 30.0% | |
| TTTAATGAATTTGATGCCAC+TGG | - | Chr1:72714334-72714353 | MsG0180004064.01.T01:intron | 30.0% | |
| ! | GGAATCAATTCCTTTGAAAA+GGG | + | Chr1:72714364-72714383 | None:intergenic | 30.0% |
| ! | TAAGTACTTGTGAGACTTTT+GGG | + | Chr1:72713976-72713995 | None:intergenic | 30.0% |
| ! | TTTTCACCAGATTTGGATTT+TGG | - | Chr1:72713487-72713506 | MsG0180004064.01.T01:three_prime_UTR | 30.0% |
| !! | AGTGGCAATTTTGAAAAGAA+TGG | + | Chr1:72713425-72713444 | None:intergenic | 30.0% |
| !! | ATTGTTGTGTTGCTATGTTT+TGG | - | Chr1:72715113-72715132 | MsG0180004064.01.T01:intron | 30.0% |
| !! | ATTTCCGTTTTTATGCATCT+GGG | - | Chr1:72713464-72713483 | MsG0180004064.01.T01:three_prime_UTR | 30.0% |
| !! | TATTTCCGTTTTTATGCATC+TGG | - | Chr1:72713463-72713482 | MsG0180004064.01.T01:three_prime_UTR | 30.0% |
| !!! | GTGCATTGCTATTTTTCATA+GGG | - | Chr1:72714983-72715002 | MsG0180004064.01.T01:intron | 30.0% |
| AAATCTGGTGGAATAGAAGA+CGG | - | Chr1:72713823-72713842 | MsG0180004064.01.T01:intron | 35.0% | |
| ACTTATGTAGCTTTCACATC+TGG | - | Chr1:72714772-72714791 | MsG0180004064.01.T01:intron | 35.0% | |
| AGTATATGCTACATAGGCAA+AGG | + | Chr1:72714223-72714242 | None:intergenic | 35.0% | |
| ATCATATTTCTCAAGGGAGT+TGG | - | Chr1:72714574-72714593 | MsG0180004064.01.T01:intron | 35.0% | |
| ATGCATTTGTGCAAAGATTG+TGG | - | Chr1:72714039-72714058 | MsG0180004064.01.T01:intron | 35.0% | |
| ATTCATTCTTCAGCTAACAG+AGG | + | Chr1:72714656-72714675 | None:intergenic | 35.0% | |
| CAAATGCATACGGATCTATT+TGG | + | Chr1:72714028-72714047 | None:intergenic | 35.0% | |
| GCCACTATCATATTTCTCAA+GGG | - | Chr1:72714568-72714587 | MsG0180004064.01.T01:intron | 35.0% | |
| GGAGGAATTCTATTTGTGTT+TGG | - | Chr1:72714595-72714614 | MsG0180004064.01.T01:intron | 35.0% | |
| GGCACAATTTGATTATGGAT+TGG | - | Chr1:72715156-72715175 | MsG0180004064.01.T01:intron | 35.0% | |
| GTTGCTAAATGAGTTCATTC+AGG | - | Chr1:72714859-72714878 | MsG0180004064.01.T01:intron | 35.0% | |
| GTTTCTTCTCCTATACGTTA+TGG | - | Chr1:72714468-72714487 | MsG0180004064.01.T01:intron | 35.0% | |
| TCAGACAATCCATAACGTAT+AGG | + | Chr1:72714480-72714499 | None:intergenic | 35.0% | |
| TCCCTTGAGAAATATGATAG+TGG | + | Chr1:72714572-72714591 | None:intergenic | 35.0% | |
| TGCATTTGTGCAAAGATTGT+GGG | - | Chr1:72714040-72714059 | MsG0180004064.01.T01:intron | 35.0% | |
| TGCCACTATCATATTTCTCA+AGG | - | Chr1:72714567-72714586 | MsG0180004064.01.T01:intron | 35.0% | |
| TGTGTCTGTTTACTAAGAAC+AGG | - | Chr1:72715083-72715102 | MsG0180004064.01.T01:intron | 35.0% | |
| TTACGATTCTGTTGTACTTG+CGG | - | Chr1:72715197-72715216 | MsG0180004064.01.T01:intron | 35.0% | |
| TTTAGCAACAAACCGTATTC+CGG | + | Chr1:72714848-72714867 | None:intergenic | 35.0% | |
| ! | CTAAGTACTTGTGAGACTTT+TGG | + | Chr1:72713977-72713996 | None:intergenic | 35.0% |
| ! | GGGAATCAATTCCTTTGAAA+AGG | + | Chr1:72714365-72714384 | None:intergenic | 35.0% |
| ! | TGAAAGCTACATAAGTTGAG+AGG | + | Chr1:72714768-72714787 | None:intergenic | 35.0% |
| ! | TTCTTCCTCAACTGTTTTCT+GGG | + | Chr1:72715024-72715043 | None:intergenic | 35.0% |
| !! | CGGTCAAGTTTGTTTTTCAA+TGG | - | Chr1:72713843-72713862 | MsG0180004064.01.T01:intron | 35.0% |
| !! | TCTAGACTGCTTTTGCTTTT+GGG | + | Chr1:72715050-72715069 | None:intergenic | 35.0% |
| !! | TGTAGCTTTTTCTGCATTGA+AGG | - | Chr1:72714137-72714156 | MsG0180004064.01.T01:intron | 35.0% |
| !! | TTCTAGACTGCTTTTGCTTT+TGG | + | Chr1:72715051-72715070 | None:intergenic | 35.0% |
| !!! | AACTGTGTTTTGAAATCTGG+TGG | - | Chr1:72713811-72713830 | MsG0180004064.01.T01:intron | 35.0% |
| !!! | GGTGCATTGCTATTTTTCAT+AGG | - | Chr1:72714982-72715001 | MsG0180004064.01.T01:intron | 35.0% |
| !!! | TGTGTTGCTATGTTTTGGAA+TGG | - | Chr1:72715118-72715137 | MsG0180004064.01.T01:intron | 35.0% |
| AATGAATTTGATGCCACTGG+TGG | - | Chr1:72714337-72714356 | MsG0180004064.01.T01:intron | 40.0% | |
| ATATTTCTCAAGGGAGTTGG+AGG | - | Chr1:72714577-72714596 | MsG0180004064.01.T01:intron | 40.0% | |
| CAACTATAGACCTACTAAGC+CGG | - | Chr1:72714826-72714845 | MsG0180004064.01.T01:intron | 40.0% | |
| CAATTCCCAGAAAACAGTTG+AGG | - | Chr1:72715016-72715035 | MsG0180004064.01.T01:intron | 40.0% | |
| TGGGATCCAAAATCCAAATC+TGG | + | Chr1:72713496-72713515 | None:intergenic | 40.0% | |
| TTCCTCAAAATCGTGAGCTT+GGG | + | Chr1:72714385-72714404 | None:intergenic | 40.0% | |
| TTTCCTCAAAATCGTGAGCT+TGG | + | Chr1:72714386-72714405 | None:intergenic | 40.0% | |
| ! | ATCTGGGTTTTCACCAGATT+TGG | - | Chr1:72713480-72713499 | MsG0180004064.01.T01:three_prime_UTR | 40.0% |
| ! | CTTCTTCCTCAACTGTTTTC+TGG | + | Chr1:72715025-72715044 | None:intergenic | 40.0% |
| !! | CTAGACTGCTTTTGCTTTTG+GGG | + | Chr1:72715049-72715068 | None:intergenic | 40.0% |
| !! | CTTGCTATTTCCTGTGTTTC+TGG | - | Chr1:72714892-72714911 | MsG0180004064.01.T01:intron | 40.0% |
| !! | GGAAGCATTTACCAAGAGAA+AGG | + | Chr1:72714635-72714654 | None:intergenic | 40.0% |
| !! | TGTCTTGGAGACTTGTTACT+TGG | - | Chr1:72714094-72714113 | MsG0180004064.01.T01:intron | 40.0% |
| !!! | TGTTTTCTCTCTCTAGCTCT+CGG | + | Chr1:72713292-72713311 | None:intergenic | 40.0% |
| AAACCATCAGCCAGAAACAC+AGG | + | Chr1:72714905-72714924 | None:intergenic | 45.0% | |
| AAACCGTATTCCGGCTTAGT+AGG | + | Chr1:72714839-72714858 | None:intergenic | 45.0% | |
| AATGGGGTTCTTCTCCTTCA+TGG | - | Chr1:72713314-72713333 | MsG0180004064.01.T01:three_prime_UTR | 45.0% | |
| AGACCTACTAAGCCGGAATA+CGG | - | Chr1:72714833-72714852 | MsG0180004064.01.T01:intron | 45.0% | |
| AGAGGGAAGCAAAGAGAACA+CGG | + | Chr1:72713341-72713360 | None:intergenic | 45.0% | |
| ATGGGGTTCTTCTCCTTCAT+GGG | - | Chr1:72713315-72713334 | MsG0180004064.01.T01:three_prime_UTR | 45.0% | |
| CACGTTTGGATCCTTTCTCT+TGG | - | Chr1:72714621-72714640 | MsG0180004064.01.T01:intron | 45.0% | |
| TTTGTGTTTGGCAGCACGTT+TGG | - | Chr1:72714607-72714626 | MsG0180004064.01.T01:intron | 45.0% | |
| ! | TTCCCAAGCTCACGATTTTG+AGG | - | Chr1:72714380-72714399 | MsG0180004064.01.T01:intron | 45.0% |
| ! | TTGCAGAACGCAGCACTTTT+TGG | - | Chr1:72714961-72714980 | MsG0180004064.01.T01:intron | 45.0% |
| !! | TTTCCTGTGTTTCTGGCTGA+TGG | - | Chr1:72714899-72714918 | MsG0180004064.01.T01:intron | 45.0% |
| AAAGAGAACACGGCCCATGA+AGG | + | Chr1:72713331-72713350 | None:intergenic | 50.0% | |
| GAGAACTGACATCTGCCATG+CGG | + | Chr1:72713373-72713392 | None:intergenic | 50.0% | |
| TATCGCTACCCCCAATTTGG+AGG | + | Chr1:72714416-72714435 | None:intergenic | 50.0% | |
| TGGTATCGCTACCCCCAATT+TGG | + | Chr1:72714419-72714438 | None:intergenic | 50.0% | |
| ! | CTTTGAAAAGGGTCCACCAG+TGG | + | Chr1:72714353-72714372 | None:intergenic | 50.0% |
| !! | CACTGGTGGACCCTTTTCAA+AGG | - | Chr1:72714351-72714370 | MsG0180004064.01.T01:intron | 50.0% |
| !! | GAGACTTTTGGGAGAGCTCA+TGG | + | Chr1:72713965-72713984 | None:intergenic | 50.0% |
| CCATGCGGAGAGGATGAAGA+GGG | + | Chr1:72713358-72713377 | None:intergenic | 55.0% | |
| CCCTCTTCATCCTCTCCGCA+TGG | - | Chr1:72713355-72713374 | MsG0180004064.01.T01:three_prime_UTR | 60.0% | |
| CTGACATCTGCCATGCGGAG+AGG | + | Chr1:72713368-72713387 | None:intergenic | 60.0% | |
| GCCATGCGGAGAGGATGAAG+AGG | + | Chr1:72713359-72713378 | None:intergenic | 60.0% | |
| GCTCTCGGTCACTGTGTTGC+TGG | + | Chr1:72713277-72713296 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 72713197 | 72715398 | 72713197 | ID=MsG0180004064.01;Name=MsG0180004064.01 |
| Chr1 | mRNA | 72713197 | 72715398 | 72713197 | ID=MsG0180004064.01.T01;Parent=MsG0180004064.01;Name=MsG0180004064.01.T01;_AED=0.29;_eAED=0.29;_QI=118|1|1|1|0.75|0.8|5|330|160 |
| Chr1 | exon | 72713197 | 72713628 | 72713197 | ID=MsG0180004064.01.T01:exon:5149;Parent=MsG0180004064.01.T01 |
| Chr1 | exon | 72713715 | 72713813 | 72713715 | ID=MsG0180004064.01.T01:exon:5148;Parent=MsG0180004064.01.T01 |
| Chr1 | exon | 72713953 | 72714042 | 72713953 | ID=MsG0180004064.01.T01:exon:5147;Parent=MsG0180004064.01.T01 |
| Chr1 | exon | 72714139 | 72714262 | 72714139 | ID=MsG0180004064.01.T01:exon:5146;Parent=MsG0180004064.01.T01 |
| Chr1 | exon | 72715213 | 72715398 | 72715213 | ID=MsG0180004064.01.T01:exon:5145;Parent=MsG0180004064.01.T01 |
| Chr1 | five_prime_UTR | 72715281 | 72715398 | 72715281 | ID=MsG0180004064.01.T01:five_prime_utr;Parent=MsG0180004064.01.T01 |
| Chr1 | CDS | 72715213 | 72715280 | 72715213 | ID=MsG0180004064.01.T01:cds;Parent=MsG0180004064.01.T01 |
| Chr1 | CDS | 72714139 | 72714262 | 72714139 | ID=MsG0180004064.01.T01:cds;Parent=MsG0180004064.01.T01 |
| Chr1 | CDS | 72713953 | 72714042 | 72713953 | ID=MsG0180004064.01.T01:cds;Parent=MsG0180004064.01.T01 |
| Chr1 | CDS | 72713715 | 72713813 | 72713715 | ID=MsG0180004064.01.T01:cds;Parent=MsG0180004064.01.T01 |
| Chr1 | CDS | 72713527 | 72713628 | 72713527 | ID=MsG0180004064.01.T01:cds;Parent=MsG0180004064.01.T01 |
| Chr1 | three_prime_UTR | 72713197 | 72713526 | 72713197 | ID=MsG0180004064.01.T01:three_prime_utr;Parent=MsG0180004064.01.T01 |
| Gene Sequence |
| Protein sequence |
