AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0010680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0010680 MtrunA17_Chr1g0171501 76.190 609 104 9 20 590 1 606 0.0 868
Msa0010680 MtrunA17_Chr7g0256181 53.577 629 228 7 20 590 1 623 0.0 639
Msa0010680 MtrunA17_Chr1g0211201 66.304 184 12 2 283 466 1 134 1.40e-70 223
Msa0010680 MtrunA17_Chr2g0328121 28.541 473 327 5 120 581 39 511 9.78e-62 212
Msa0010680 MtrunA17_Chr1g0211211 91.954 87 7 0 504 590 1 87 4.97e-49 165
Msa0010680 MtrunA17_Chr8g0368151 28.692 474 314 12 111 568 13 478 2.49e-47 172
Msa0010680 MtrunA17_Chr1g0185601 25.870 460 324 8 143 589 56 511 2.06e-39 151
Msa0010680 MtrunA17_Chr2g0282091 24.948 485 319 12 108 564 10 477 4.57e-39 150
Msa0010680 MtrunA17_Chr8g0359961 26.097 433 295 11 120 534 28 453 9.41e-38 146
Msa0010680 MtrunA17_Chr2g0303221 25.175 429 293 12 127 536 33 452 1.85e-33 134
Msa0010680 MtrunA17_Chr4g0021331 24.878 410 282 10 143 534 47 448 1.21e-32 131
Msa0010680 MtrunA17_Chr2g0324251 25.791 411 279 7 143 533 52 456 6.60e-32 129
Msa0010680 MtrunA17_Chr1g0155351 27.124 306 210 8 138 435 69 369 3.56e-26 111
Msa0010680 MtrunA17_Chr1g0194521 27.178 287 201 7 138 419 105 388 2.76e-24 107
Msa0010680 MtrunA17_Chr3g0132571 23.690 439 313 10 142 564 56 488 3.64e-24 106
Msa0010680 MtrunA17_Chr1g0196741 24.719 356 219 6 219 534 280 626 7.81e-22 100
Msa0010680 MtrunA17_Chr1g0210801 23.204 362 266 7 217 571 169 525 1.63e-19 92.4
Msa0010680 MtrunA17_Chr1g0210801 24.436 266 195 4 229 488 281 546 5.19e-15 78.2
Msa0010680 MtrunA17_Chr1g0210801 23.106 264 198 3 286 545 130 392 5.91e-14 74.7
Msa0010680 MtrunA17_Chr3g0089851 20.723 415 286 10 138 545 81 459 2.86e-18 88.2
Msa0010680 MtrunA17_Chr1g0147171 25.298 336 238 7 225 551 145 476 4.38e-18 88.2
Msa0010680 MtrunA17_Chr1g0168811 24.742 291 212 5 283 567 242 531 4.84e-18 87.8
Msa0010680 MtrunA17_Chr1g0168811 21.084 498 335 12 131 582 129 614 1.11e-12 70.9
Msa0010680 MtrunA17_Chr5g0417961 22.626 358 261 7 227 574 274 625 2.81e-17 85.9
Msa0010680 MtrunA17_Chr8g0390501 22.171 433 286 10 161 546 49 477 1.50e-16 83.2
Msa0010680 MtrunA17_Chr4g0033981 22.727 264 168 4 284 545 348 577 1.52e-16 83.2
Msa0010680 MtrunA17_Chr4g0033981 23.308 266 199 4 284 545 208 472 1.05e-13 74.3
Msa0010680 MtrunA17_Chr3g0143851 22.096 353 228 7 278 584 300 651 2.88e-16 82.4
Msa0010680 MtrunA17_Chr3g0143851 20.000 270 210 4 259 523 386 654 1.58e-12 70.5
Msa0010680 MtrunA17_Chr3g0143851 23.047 256 188 5 266 515 149 401 2.10e-12 70.1
Msa0010680 MtrunA17_Chr3g0136851 21.526 367 248 5 221 548 163 528 3.08e-16 82.8
Msa0010680 MtrunA17_Chr3g0136851 22.442 303 202 4 227 528 413 683 7.96e-12 68.6
Msa0010680 MtrunA17_Chr6g0481991 20.566 389 266 9 147 493 190 577 5.55e-16 81.3
Msa0010680 MtrunA17_Chr6g0481991 20.284 493 333 12 109 582 110 561 7.89e-15 77.8
Msa0010680 MtrunA17_Chr7g0220481 22.630 327 239 6 226 539 180 505 6.48e-16 81.6
Msa0010680 MtrunA17_Chr7g0220481 23.507 268 197 5 247 508 272 537 6.13e-12 68.9
Msa0010680 MtrunA17_Chr3g0099661 22.467 454 300 11 153 561 167 613 1.01e-15 80.9
Msa0010680 MtrunA17_Chr1g0166071 22.689 357 262 6 227 574 275 626 1.06e-15 80.9
Msa0010680 MtrunA17_Chr1g0166071 26.141 241 167 5 284 522 168 399 5.25e-14 75.5
Msa0010680 MtrunA17_Chr4g0059671 20.891 359 263 8 225 569 209 560 1.18e-15 80.9
Msa0010680 MtrunA17_Chr4g0059671 20.536 336 226 5 227 522 282 616 7.59e-12 68.6
Msa0010680 MtrunA17_Chr4g0037841 23.590 390 237 14 230 567 137 517 2.66e-15 79.0
Msa0010680 MtrunA17_Chr7g0220501 24.000 300 208 6 235 529 239 523 3.20e-15 79.3
Msa0010680 MtrunA17_Chr2g0297991 23.218 435 290 11 139 544 143 562 4.22e-15 79.0
Msa0010680 MtrunA17_Chr2g0297991 21.348 445 279 13 161 566 349 761 3.67e-13 72.8
Msa0010680 MtrunA17_Chr2g0297991 25.373 268 177 8 161 414 559 817 4.15e-12 69.3
Msa0010680 MtrunA17_Chr8g0392911 24.291 247 181 5 280 522 427 671 5.04e-15 78.6
Msa0010680 MtrunA17_Chr8g0392911 21.198 434 316 9 123 545 137 555 2.15e-14 76.6
Msa0010680 MtrunA17_Chr2g0297211 23.864 352 242 8 247 583 693 1033 6.26e-15 78.6
Msa0010680 MtrunA17_Chr4g0060341 23.590 390 237 14 230 567 137 517 6.90e-15 77.8
Msa0010680 MtrunA17_Chr3g0133151 21.429 350 250 10 162 493 63 405 1.31e-14 76.6
Msa0010680 MtrunA17_Chr7g0256621 19.730 370 275 7 174 522 85 453 2.03e-14 76.3
Msa0010680 MtrunA17_Chr3g0121341 22.761 268 198 4 285 546 258 522 3.77e-14 75.9
Msa0010680 MtrunA17_Chr7g0265721 18.966 406 281 8 214 574 66 468 3.81e-14 75.9
Msa0010680 MtrunA17_Chr7g0265721 20.909 330 248 7 254 574 317 642 9.67e-12 68.2
Msa0010680 MtrunA17_Chr5g0434021 20.334 359 248 6 227 548 296 653 4.65e-14 75.9
Msa0010680 MtrunA17_Chr5g0434021 21.429 392 240 11 227 563 331 709 6.23e-12 68.9
Msa0010680 MtrunA17_Chr3g0091741 20.275 291 215 7 291 567 121 408 5.89e-14 74.7
Msa0010680 MtrunA17_Chr5g0396041 23.019 265 197 4 233 492 312 574 5.99e-14 75.5
Msa0010680 MtrunA17_Chr5g0396041 20.567 282 212 7 263 533 268 548 1.38e-13 74.3
Msa0010680 MtrunA17_Chr6g0482611 20.930 258 165 4 275 493 295 552 6.29e-14 74.7
Msa0010680 MtrunA17_Chr6g0482611 18.930 243 192 3 289 527 204 445 3.43e-11 65.9
Msa0010680 MtrunA17_Chr3g0143411 24.167 240 178 3 287 523 137 375 6.39e-14 74.7
Msa0010680 MtrunA17_Chr7g0257371 22.654 309 231 5 227 528 223 530 6.60e-14 75.1
Msa0010680 MtrunA17_Chr7g0257371 22.097 267 201 3 284 544 211 476 3.63e-13 72.8
Msa0010680 MtrunA17_Chr8g0359551 24.825 286 201 6 247 523 165 445 7.34e-14 74.7
Msa0010680 MtrunA17_Chr6g0482601 19.655 290 226 4 284 567 141 429 7.60e-14 73.9
Msa0010680 MtrunA17_Chr8g0387281 22.917 240 176 4 290 523 312 548 8.27e-14 74.7
Msa0010680 MtrunA17_Chr6g0482821 19.655 290 226 4 284 567 232 520 9.96e-14 73.9
Msa0010680 MtrunA17_Chr6g0478261 19.575 424 317 9 109 514 78 495 1.11e-13 73.9
Msa0010680 MtrunA17_Chr1g0159521 19.706 340 220 7 289 582 201 533 1.44e-13 73.6
Msa0010680 MtrunA17_Chr6g0482571 21.034 290 214 6 288 567 90 374 1.49e-13 72.8
Msa0010680 MtrunA17_Chr8g0368891 21.786 280 211 5 268 542 356 632 3.44e-13 72.4
Msa0010680 MtrunA17_Chr6g0473331 23.611 216 157 3 284 493 366 579 4.67e-13 72.0
Msa0010680 MtrunA17_Chr2g0290441 21.170 359 271 6 201 549 88 444 5.51e-13 72.0
Msa0010680 MtrunA17_Chr1g0182521 19.822 338 265 4 224 556 272 608 6.80e-13 71.6
Msa0010680 MtrunA17_Chr4g0076151 21.111 270 209 2 284 549 207 476 7.57e-13 71.6
Msa0010680 MtrunA17_Chr4g0047591 23.642 313 214 6 212 515 251 547 7.81e-13 71.6
Msa0010680 MtrunA17_Chr6g0481621 20.147 273 206 4 279 540 246 517 8.92e-13 71.2
Msa0010680 MtrunA17_Chr6g0481621 18.077 260 208 3 289 544 221 479 2.83e-11 66.2
Msa0010680 MtrunA17_Chr6g0481621 21.311 305 200 5 227 491 263 567 4.08e-11 65.9
Msa0010680 MtrunA17_Chr7g0231941 20.375 373 254 9 161 523 88 427 9.29e-13 71.2
Msa0010680 MtrunA17_Chr3g0118171 20.519 385 279 7 119 489 33 404 9.59e-13 70.9
Msa0010680 MtrunA17_Chr1g0190191 22.648 287 213 6 290 569 119 403 1.35e-12 70.5
Msa0010680 MtrunA17_Chr2g0304071 19.465 411 299 10 165 545 74 482 1.37e-12 70.9
Msa0010680 MtrunA17_Chr6g0482561 19.649 285 222 4 289 567 73 356 1.52e-12 69.7
Msa0010680 MtrunA17_Chr2g0290431 21.429 336 222 6 220 549 20 319 1.56e-12 70.1
Msa0010680 MtrunA17_Chr5g0446031 18.451 439 306 7 152 545 96 527 1.97e-12 70.5
Msa0010680 MtrunA17_Chr5g0446031 18.937 301 204 4 300 560 559 859 2.68e-11 66.6
Msa0010680 MtrunA17_Chr2g0277851 22.000 200 151 3 318 513 234 432 2.28e-12 70.1
Msa0010680 MtrunA17_Chr6g0477361 20.578 277 206 4 227 489 37 313 2.54e-12 68.2
Msa0010680 MtrunA17_Chr6g0473261 20.721 222 172 2 276 493 368 589 2.73e-12 69.7
Msa0010680 MtrunA17_Chr6g0473261 23.045 243 147 5 288 526 310 516 1.07e-11 67.8
Msa0010680 MtrunA17_Chr6g0473351 22.727 220 169 1 288 506 262 481 3.10e-12 69.3
Msa0010680 MtrunA17_Chr6g0473351 20.149 268 179 3 227 493 305 538 4.35e-11 65.5
Msa0010680 MtrunA17_Chr6g0458411 19.938 321 251 4 225 540 200 519 3.53e-12 69.3
Msa0010680 MtrunA17_Chr7g0241871 21.429 322 243 5 225 538 235 554 3.65e-12 69.3
Msa0010680 MtrunA17_Chr7g0246931 21.090 422 303 11 141 544 126 535 3.71e-12 68.9
Msa0010680 MtrunA17_Chr8g0382891 20.345 290 193 5 283 568 182 437 3.97e-12 68.9
Msa0010680 MtrunA17_Chr3g0102961 22.989 261 160 5 287 539 273 500 4.15e-12 68.9
Msa0010680 MtrunA17_Chr6g0473241 20.796 226 173 3 272 493 318 541 4.86e-12 68.6
Msa0010680 MtrunA17_Chr1g0211881 21.964 387 259 9 138 517 87 437 5.53e-12 68.6
Msa0010680 MtrunA17_Chr8g0377751 22.059 204 155 2 284 483 793 996 5.63e-12 68.9
Msa0010680 MtrunA17_Chr2g0332881 22.143 420 256 13 217 583 237 638 5.73e-12 68.9
Msa0010680 MtrunA17_Chr1g0170071 19.681 376 284 8 180 541 253 624 5.95e-12 68.9
Msa0010680 MtrunA17_Chr4g0048611 21.017 295 218 6 284 567 142 432 6.25e-12 68.9
Msa0010680 MtrunA17_Chr4g0038401 19.865 297 216 7 284 567 524 811 7.43e-12 68.6
Msa0010680 MtrunA17_Chr6g0473501 21.681 226 171 3 272 493 213 436 7.64e-12 67.8
Msa0010680 MtrunA17_Chr6g0473341 20.796 226 173 3 272 493 318 541 8.35e-12 67.8
Msa0010680 MtrunA17_Chr7g0217931 22.476 307 227 5 271 571 123 424 8.71e-12 67.8
Msa0010680 MtrunA17_Chr6g0473471 21.681 226 171 3 272 493 213 436 8.87e-12 67.4
Msa0010680 MtrunA17_Chr6g0478691 22.848 302 227 4 227 523 246 546 9.31e-12 67.8
Msa0010680 MtrunA17_Chr6g0473491 21.304 230 176 3 269 493 312 541 9.35e-12 67.8
Msa0010680 MtrunA17_Chr6g0479541 21.196 368 272 7 185 540 254 615 9.47e-12 67.8
Msa0010680 MtrunA17_Chr4g0054821 21.162 241 157 2 284 523 251 459 1.02e-11 67.8
Msa0010680 MtrunA17_Chr2g0285331 22.267 247 172 5 280 514 254 492 1.03e-11 68.2
Msa0010680 MtrunA17_Chr8g0335951 22.546 377 265 10 136 501 90 450 1.06e-11 67.4
Msa0010680 MtrunA17_Chr6g0473431 20.290 345 256 4 194 519 168 512 1.08e-11 67.4
Msa0010680 MtrunA17_Chr2g0290451 22.034 295 219 4 263 549 151 442 1.32e-11 67.4
Msa0010680 MtrunA17_Chr6g0473481 20.270 222 173 2 276 493 320 541 1.36e-11 67.4
Msa0010680 MtrunA17_Chr6g0473481 22.500 240 152 4 288 526 262 468 2.53e-11 66.2
Msa0010680 MtrunA17_Chr6g0473511 20.270 222 173 2 276 493 320 541 1.36e-11 67.4
Msa0010680 MtrunA17_Chr6g0473511 22.500 240 152 4 288 526 262 468 2.53e-11 66.2
Msa0010680 MtrunA17_Chr5g0419551 25.203 246 177 5 284 523 274 518 1.84e-11 67.0
Msa0010680 MtrunA17_Chr5g0419551 24.060 266 194 6 225 483 355 619 1.97e-11 67.0
Msa0010680 MtrunA17_Chr6g0471201 21.829 339 233 10 216 537 204 527 1.92e-11 66.6
Msa0010680 MtrunA17_Chr6g0481971 18.816 473 329 9 112 567 76 510 2.05e-11 66.6
Msa0010680 MtrunA17_Chr7g0236501 20.863 278 180 5 283 520 211 488 2.79e-11 66.2
Msa0010680 MtrunA17_Chr6g0473461 20.976 205 158 2 289 489 3 207 2.79e-11 63.5
Msa0010680 MtrunA17_Chr8g0365781 22.591 301 217 7 248 538 653 947 3.26e-11 66.6
Msa0010680 MtrunA17_Chr1g0162281 22.267 247 187 3 284 526 325 570 4.11e-11 65.9
Msa0010680 MtrunA17_Chr6g0473151 20.000 220 172 2 278 493 252 471 4.77e-11 65.5
Msa0010680 MtrunA17_Chr6g0482651 20.000 285 221 4 289 567 225 508 4.96e-11 65.5
Msa0010680 MtrunA17_Chr8g0391651 20.098 408 309 9 173 568 295 697 4.97e-11 65.9
Msa0010680 MtrunA17_Chr6g0482551 20.000 225 170 5 309 528 219 438 5.59e-11 65.1
Msa0010680 MtrunA17_Chr3g0116201 23.077 247 185 3 284 526 173 418 5.66e-11 65.1
Msa0010680 MtrunA17_Chr6g0478551 19.630 270 212 3 284 549 258 526 5.99e-11 65.1
Msa0010680 MtrunA17_Chr6g0473441 20.179 223 174 2 275 493 319 541 6.46e-11 65.1
Msa0010680 MtrunA17_Chr6g0472611 21.171 222 171 2 276 493 326 547 6.55e-11 65.1
Msa0010680 MtrunA17_Chr8g0349431 29.915 117 81 1 136 251 6 122 6.63e-11 60.1
Msa0010680 MtrunA17_Chr6g0473251 19.897 387 268 9 147 493 154 538 9.13e-11 64.7
Msa0010680 MtrunA17_Chr6g0481981 19.436 319 239 6 280 582 119 435 9.52e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0010680 AT1G80270.1 50.751 599 264 7 20 590 1 596 0.0 595
Msa0010680 AT1G80270.3 50.751 599 264 7 20 590 1 596 0.0 595
Msa0010680 AT1G80270.2 50.751 599 264 7 20 590 1 596 0.0 595
Msa0010680 AT1G80270.5 50.751 599 264 7 20 590 1 596 0.0 595
Msa0010680 AT1G80270.4 50.751 599 264 7 20 590 1 596 0.0 595
Msa0010680 AT1G15480.1 50.836 598 263 9 20 590 1 594 0.0 571
Msa0010680 AT3G15590.1 48.515 505 251 4 93 590 107 609 9.74e-160 470
Msa0010680 AT3G15590.2 48.515 505 251 4 93 590 107 609 9.74e-160 470
Msa0010680 AT1G07590.1 27.912 455 318 4 137 581 79 533 3.79e-51 184
Msa0010680 AT1G60770.1 27.646 463 311 11 123 569 25 479 3.20e-45 167
Msa0010680 AT4G02820.1 26.974 456 321 5 142 589 80 531 1.41e-41 158
Msa0010680 AT4G21705.1 25.571 438 303 9 124 544 24 455 9.55e-41 155
Msa0010680 AT2G20710.1 27.696 408 279 7 138 533 53 456 3.59e-39 150
Msa0010680 AT1G02150.1 24.171 422 309 8 136 547 80 500 9.82e-35 138
Msa0010680 AT5G27460.1 26.126 444 306 9 138 564 53 491 1.43e-32 131
Msa0010680 AT2G20710.2 28.212 358 241 7 188 533 8 361 1.05e-30 124
Msa0010680 AT4G01990.1 28.349 321 215 11 139 449 56 371 4.45e-28 118
Msa0010680 AT1G02370.1 26.331 338 239 8 124 452 70 406 1.76e-27 117
Msa0010680 AT3G23020.1 23.472 409 259 7 172 530 236 640 9.63e-25 109
Msa0010680 AT5G09450.1 22.115 312 230 7 122 426 56 361 4.11e-21 96.7
Msa0010680 AT1G28020.1 26.804 291 196 7 142 420 55 340 5.84e-21 97.1
Msa0010680 AT5G02860.1 22.103 466 300 9 139 549 116 573 1.76e-20 96.3
Msa0010680 AT5G02860.1 23.529 306 224 6 227 523 282 586 4.32e-19 92.0
Msa0010680 AT5G02860.4 22.103 466 300 9 139 549 116 573 1.76e-20 96.3
Msa0010680 AT5G02860.4 23.529 306 224 6 227 523 282 586 4.32e-19 92.0
Msa0010680 AT5G02860.2 22.103 466 300 9 139 549 116 573 1.76e-20 96.3
Msa0010680 AT5G02860.2 23.529 306 224 6 227 523 282 586 4.32e-19 92.0
Msa0010680 AT5G02860.5 22.103 466 300 9 139 549 116 573 1.76e-20 96.3
Msa0010680 AT5G02860.5 23.529 306 224 6 227 523 282 586 4.32e-19 92.0
Msa0010680 AT5G02860.3 22.103 466 300 9 139 549 116 573 1.76e-20 96.3
Msa0010680 AT5G02860.3 23.529 306 224 6 227 523 282 586 4.32e-19 92.0
Msa0010680 AT2G35130.3 24.014 279 201 4 279 550 247 521 1.33e-19 93.2
Msa0010680 AT2G35130.3 23.759 282 209 4 213 488 284 565 4.61e-15 79.0
Msa0010680 AT2G35130.3 23.183 289 185 5 283 567 145 400 2.06e-12 70.5
Msa0010680 AT2G35130.1 24.014 279 201 4 279 550 250 524 1.60e-19 92.8
Msa0010680 AT2G35130.1 23.759 282 209 4 213 488 287 568 5.67e-15 78.6
Msa0010680 AT2G35130.1 21.377 276 206 5 283 549 145 418 9.31e-12 68.2
Msa0010680 AT2G35130.2 24.014 279 201 4 279 550 272 546 1.82e-19 92.8
Msa0010680 AT2G35130.2 23.759 282 209 4 213 488 309 590 7.39e-15 78.2
Msa0010680 AT2G35130.2 21.377 276 206 5 283 549 167 440 8.63e-12 68.6
Msa0010680 AT1G74850.1 22.302 417 300 8 147 550 67 472 1.96e-19 93.2
Msa0010680 AT1G74850.1 20.679 324 251 4 227 545 285 607 2.89e-13 73.6
Msa0010680 AT4G39620.2 22.491 289 188 4 283 568 198 453 8.21e-17 84.0
Msa0010680 AT5G39980.1 22.169 415 288 12 149 544 116 514 8.86e-17 84.3
Msa0010680 AT2G31400.2 22.515 342 254 8 254 587 263 601 9.36e-17 84.7
Msa0010680 AT2G31400.1 22.515 342 254 8 254 587 263 601 9.97e-17 84.7
Msa0010680 AT3G04760.1 22.404 366 259 9 169 515 94 453 1.02e-16 84.0
Msa0010680 AT4G16390.1 21.096 365 282 4 191 549 106 470 1.10e-16 84.3
Msa0010680 AT4G39620.1 22.491 289 188 4 283 568 198 453 1.12e-16 84.0
Msa0010680 AT5G42310.1 22.414 290 214 5 286 567 332 618 7.03e-16 81.6
Msa0010680 AT5G42310.1 23.181 371 270 7 229 585 306 675 2.24e-15 80.1
Msa0010680 AT5G21222.1 21.918 365 243 4 225 547 390 754 1.01e-15 81.3
Msa0010680 AT5G21222.1 20.875 297 226 5 286 574 382 677 9.33e-13 72.0
Msa0010680 AT5G21222.1 19.540 261 196 3 301 547 318 578 1.13e-11 68.6
Msa0010680 AT5G21222.2 21.918 365 243 4 225 547 390 754 1.01e-15 81.3
Msa0010680 AT5G21222.2 20.875 297 226 5 286 574 382 677 9.33e-13 72.0
Msa0010680 AT5G21222.2 19.540 261 196 3 301 547 318 578 1.13e-11 68.6
Msa0010680 AT5G21222.4 21.918 365 243 4 225 547 390 754 1.01e-15 81.3
Msa0010680 AT5G21222.4 20.875 297 226 5 286 574 382 677 9.33e-13 72.0
Msa0010680 AT5G21222.4 19.540 261 196 3 301 547 318 578 1.13e-11 68.6
Msa0010680 AT5G21222.3 21.918 365 243 4 225 547 390 754 1.01e-15 81.3
Msa0010680 AT5G21222.3 20.875 297 226 5 286 574 382 677 9.33e-13 72.0
Msa0010680 AT5G21222.3 19.540 261 196 3 301 547 318 578 1.13e-11 68.6
Msa0010680 AT1G20300.1 24.255 235 174 3 292 523 150 383 1.36e-15 80.5
Msa0010680 AT5G25630.3 23.823 361 220 7 239 550 79 433 1.51e-15 80.1
Msa0010680 AT5G25630.1 23.955 359 222 7 239 550 130 484 1.70e-15 80.1
Msa0010680 AT3G22470.1 20.915 306 236 4 248 548 199 503 2.24e-15 79.7
Msa0010680 AT2G41720.1 20.144 417 291 10 139 549 94 474 2.71e-15 80.1
Msa0010680 AT2G41720.3 20.144 417 291 10 139 549 94 474 2.99e-15 79.7
Msa0010680 AT1G02060.1 21.011 376 255 7 161 526 71 414 3.88e-15 79.3
Msa0010680 AT2G06000.1 24.118 340 210 10 286 587 96 425 4.65e-15 78.6
Msa0010680 AT2G06000.1 20.623 257 198 4 275 526 223 478 2.09e-12 70.1
Msa0010680 AT2G06000.2 24.118 340 210 10 286 587 96 425 4.65e-15 78.6
Msa0010680 AT2G06000.2 20.623 257 198 4 275 526 223 478 2.09e-12 70.1
Msa0010680 AT3G59040.1 20.712 309 239 4 224 527 139 446 7.32e-15 78.2
Msa0010680 AT5G01110.1 23.529 289 215 4 240 523 181 468 7.59e-15 78.6
Msa0010680 AT5G01110.2 23.529 289 215 4 240 523 209 496 8.73e-15 78.2
Msa0010680 AT3G59040.2 20.712 309 239 4 224 527 146 453 8.84e-15 77.8
Msa0010680 AT1G19520.1 25.692 253 179 4 267 511 390 641 1.09e-14 77.8
Msa0010680 AT1G73710.1 21.143 350 231 7 227 532 308 656 1.34e-14 77.8
Msa0010680 AT1G73710.1 20.312 256 200 2 263 514 554 809 2.03e-12 70.9
Msa0010680 AT2G39230.1 20.613 359 257 8 198 545 294 635 1.34e-14 77.8
Msa0010680 AT2G15630.1 21.587 315 244 3 211 523 142 455 1.42e-14 77.4
Msa0010680 AT1G12700.3 20.974 267 204 4 268 529 219 483 1.95e-14 77.0
Msa0010680 AT1G12700.2 20.974 267 204 4 268 529 219 483 1.95e-14 77.0
Msa0010680 AT4G19440.4 26.336 262 185 4 267 521 559 819 2.21e-14 77.0
Msa0010680 AT4G19440.2 26.336 262 185 4 267 521 559 819 2.21e-14 77.0
Msa0010680 AT4G19440.3 26.336 262 185 4 267 521 559 819 2.21e-14 77.0
Msa0010680 AT4G19440.1 26.336 262 185 4 267 521 559 819 2.21e-14 77.0
Msa0010680 AT1G12700.1 20.974 267 204 4 268 529 203 467 2.24e-14 76.6
Msa0010680 AT5G65560.1 21.898 411 286 10 174 568 106 497 2.71e-14 77.0
Msa0010680 AT5G65560.1 22.677 269 203 3 263 527 432 699 6.69e-12 69.3
Msa0010680 AT5G65560.1 21.192 302 233 4 222 519 286 586 6.50e-11 65.9
Msa0010680 AT5G65560.2 21.898 411 286 10 174 568 106 497 2.71e-14 77.0
Msa0010680 AT5G65560.2 22.677 269 203 3 263 527 432 699 6.69e-12 69.3
Msa0010680 AT5G65560.2 21.192 302 233 4 222 519 286 586 6.50e-11 65.9
Msa0010680 AT5G65560.3 21.898 411 286 10 174 568 106 497 2.71e-14 77.0
Msa0010680 AT5G65560.3 22.677 269 203 3 263 527 432 699 6.69e-12 69.3
Msa0010680 AT5G65560.3 21.192 302 233 4 222 519 286 586 6.50e-11 65.9
Msa0010680 AT1G62670.2 22.517 302 217 5 284 574 282 577 2.78e-14 76.6
Msa0010680 AT1G62670.1 22.517 302 217 5 284 574 282 577 2.78e-14 76.6
Msa0010680 AT1G13630.3 22.867 293 218 5 284 569 192 483 3.91e-14 76.3
Msa0010680 AT2G41720.2 22.059 272 205 3 284 549 72 342 4.18e-14 75.9
Msa0010680 AT2G41720.2 21.465 396 233 9 227 545 84 478 2.63e-11 67.0
Msa0010680 AT1G13630.6 22.867 293 218 5 284 569 155 446 4.74e-14 75.9
Msa0010680 AT3G53170.4 21.831 284 199 8 283 555 155 426 5.57e-14 74.7
Msa0010680 AT3G53170.4 22.747 233 146 4 229 459 241 441 2.80e-11 66.2
Msa0010680 AT1G13630.4 22.526 293 219 5 284 569 330 621 5.66e-14 75.9
Msa0010680 AT5G61990.1 19.444 432 327 11 129 545 425 850 5.77e-14 75.9
Msa0010680 AT1G13630.1 22.526 293 219 5 284 569 283 574 6.02e-14 75.5
Msa0010680 AT1G13630.2 22.526 293 219 5 284 569 325 616 6.48e-14 75.5
Msa0010680 AT1G13630.5 22.526 293 219 5 284 569 317 608 7.03e-14 75.5
Msa0010680 AT3G53170.2 21.831 284 199 8 283 555 205 476 7.46e-14 74.7
Msa0010680 AT3G53170.1 21.831 284 199 8 283 555 205 476 7.46e-14 74.7
Msa0010680 AT5G04810.2 21.795 312 196 6 273 541 324 630 8.03e-14 75.1
Msa0010680 AT5G04810.2 19.207 328 259 4 226 548 451 777 1.60e-11 67.8
Msa0010680 AT1G74750.2 20.937 363 262 8 158 507 296 646 9.18e-14 75.1
Msa0010680 AT1G74750.1 20.937 363 262 8 158 507 296 646 9.18e-14 75.1
Msa0010680 AT1G74750.4 20.937 363 262 8 158 507 296 646 9.18e-14 75.1
Msa0010680 AT1G74750.3 20.937 363 262 8 158 507 296 646 9.18e-14 75.1
Msa0010680 AT4G01030.1 24.437 311 207 8 230 528 95 389 9.83e-14 75.1
Msa0010680 AT5G04810.1 21.795 312 196 6 273 541 324 630 1.17e-13 74.7
Msa0010680 AT5G04810.1 19.638 387 268 6 226 570 451 836 3.35e-13 73.2
Msa0010680 AT5G04810.1 26.106 226 161 4 161 383 630 852 3.58e-11 67.0
Msa0010680 AT1G62910.1 22.222 297 214 6 284 569 284 574 1.21e-13 74.3
Msa0010680 AT2G18940.1 21.411 411 297 8 152 544 133 535 1.24e-13 74.7
Msa0010680 AT2G18940.1 22.105 285 171 6 296 569 213 457 1.48e-13 74.3
Msa0010680 AT2G17140.1 20.748 294 214 4 280 567 348 628 1.70e-13 74.3
Msa0010680 AT2G17140.2 20.748 294 214 4 280 567 348 628 1.70e-13 74.3
Msa0010680 AT5G50280.1 22.102 371 265 10 214 567 261 624 1.83e-13 73.9
Msa0010680 AT1G18900.4 21.329 286 219 4 227 507 367 651 1.92e-13 73.9
Msa0010680 AT1G18900.2 21.329 286 219 4 227 507 367 651 1.92e-13 73.9
Msa0010680 AT1G18900.1 21.329 286 219 4 227 507 367 651 1.92e-13 73.9
Msa0010680 AT1G43010.1 25.118 211 150 4 138 346 51 255 1.93e-13 71.2
Msa0010680 AT1G18900.3 21.329 286 219 4 227 507 367 651 1.93e-13 73.9
Msa0010680 AT5G12100.1 21.951 369 246 10 213 574 167 500 1.93e-13 73.9
Msa0010680 AT3G16710.1 21.374 262 165 5 270 528 273 496 2.23e-13 73.2
Msa0010680 AT1G09900.1 22.179 257 195 3 275 527 221 476 2.56e-13 73.2
Msa0010680 AT4G31850.1 23.387 372 260 10 194 550 331 692 3.56e-13 73.2
Msa0010680 AT4G31850.1 21.448 359 241 6 227 545 156 513 2.41e-12 70.9
Msa0010680 AT1G30290.2 21.348 267 205 2 280 541 229 495 4.99e-13 72.8
Msa0010680 AT1G06710.7 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.7 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.1 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.1 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.9 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.9 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.4 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.4 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.13 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.13 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.3 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.3 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.8 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.8 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.2 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.2 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.19 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.19 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.5 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.5 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.6 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.6 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G06710.12 23.313 326 218 7 227 523 340 662 5.26e-13 72.8
Msa0010680 AT1G06710.12 18.768 341 255 5 247 566 541 880 3.71e-11 66.6
Msa0010680 AT1G30290.1 21.348 267 205 2 280 541 229 495 5.37e-13 72.4
Msa0010680 AT1G06710.15 23.385 325 217 7 227 522 340 661 5.42e-13 72.8
Msa0010680 AT1G06710.15 18.768 341 255 5 247 566 541 880 4.39e-11 66.6
Msa0010680 AT1G06710.18 23.385 325 217 7 227 522 340 661 5.42e-13 72.8
Msa0010680 AT1G06710.18 18.768 341 255 5 247 566 541 880 4.39e-11 66.6
Msa0010680 AT1G06710.17 23.385 325 217 7 227 522 340 661 5.42e-13 72.8
Msa0010680 AT1G06710.17 18.768 341 255 5 247 566 541 880 4.39e-11 66.6
Msa0010680 AT1G06710.14 23.385 325 217 7 227 522 340 661 5.42e-13 72.8
Msa0010680 AT1G06710.14 18.768 341 255 5 247 566 541 880 4.39e-11 66.6
Msa0010680 AT1G06710.16 23.385 325 217 7 227 522 340 661 5.42e-13 72.8
Msa0010680 AT1G06710.16 18.768 341 255 5 247 566 541 880 4.39e-11 66.6
Msa0010680 AT1G06710.10 23.385 325 217 7 227 522 340 661 5.42e-13 72.8
Msa0010680 AT1G06710.10 18.768 341 255 5 247 566 541 880 4.39e-11 66.6
Msa0010680 AT1G06710.11 23.385 325 217 7 227 522 340 661 5.42e-13 72.8
Msa0010680 AT1G06710.11 18.768 341 255 5 247 566 541 880 4.39e-11 66.6
Msa0010680 AT1G31840.1 19.257 296 227 5 280 564 518 812 6.64e-13 72.4
Msa0010680 AT1G62930.1 22.559 297 213 5 284 569 281 571 7.27e-13 72.0
Msa0010680 AT1G62930.1 22.177 248 186 5 284 526 211 456 2.35e-12 70.5
Msa0010680 AT1G63080.2 22.436 312 223 6 269 569 253 556 1.00e-12 71.6
Msa0010680 AT1G63080.1 22.436 312 223 6 269 569 253 556 1.00e-12 71.6
Msa0010680 AT1G63080.3 22.436 312 223 6 269 569 253 556 1.00e-12 71.6
Msa0010680 AT5G46680.1 23.297 279 174 5 278 516 32 310 1.15e-12 70.9
Msa0010680 AT3G06920.2 19.518 415 311 10 160 559 81 487 1.17e-12 71.6
Msa0010680 AT3G06920.3 19.518 415 311 10 160 559 81 487 1.17e-12 71.6
Msa0010680 AT3G06920.1 19.518 415 311 10 160 559 67 473 1.39e-12 71.2
Msa0010680 AT1G12620.1 18.263 334 256 5 247 564 200 532 1.51e-12 70.9
Msa0010680 AT5G48730.1 22.932 266 195 5 230 488 159 421 1.57e-12 70.5
Msa0010680 AT1G12300.1 18.862 334 254 5 247 564 216 548 1.71e-12 70.9
Msa0010680 AT2G32630.1 21.021 333 249 7 245 567 210 538 1.95e-12 70.5
Msa0010680 AT5G16640.1 21.094 384 257 8 230 569 121 502 1.95e-12 70.1
Msa0010680 AT3G06430.1 23.028 317 194 8 245 550 109 386 2.09e-12 70.1
Msa0010680 AT1G51965.1 22.010 418 273 13 161 567 209 584 2.20e-12 70.5
Msa0010680 AT1G28000.1 25.339 221 129 4 139 357 49 235 3.06e-12 68.9
Msa0010680 AT5G25630.2 21.392 388 260 10 239 587 130 511 3.34e-12 69.7
Msa0010680 AT3G60050.2 21.791 335 232 9 211 531 142 460 4.33e-12 68.9
Msa0010680 AT3G60050.1 21.791 335 232 9 211 531 142 460 4.33e-12 68.9
Msa0010680 AT3G11380.1 27.155 232 146 6 102 315 315 541 6.56e-12 68.6
Msa0010680 AT1G09820.1 18.971 311 238 7 245 545 174 480 6.59e-12 68.9
Msa0010680 AT1G09820.1 22.973 296 219 7 280 568 283 576 9.40e-11 65.1
Msa0010680 AT1G63130.1 20.000 250 195 3 284 529 247 495 7.16e-12 68.9
Msa0010680 AT1G63130.2 20.000 250 195 3 284 529 247 495 7.16e-12 68.9
Msa0010680 AT1G63400.1 21.549 297 216 5 284 569 286 576 7.60e-12 68.6
Msa0010680 AT1G63070.1 21.812 298 215 5 284 569 241 532 9.71e-12 68.2
Msa0010680 AT5G55840.2 21.613 310 235 6 224 527 338 645 1.14e-11 68.6
Msa0010680 AT5G55840.1 21.613 310 235 6 224 527 338 645 1.14e-11 68.6
Msa0010680 AT5G64320.1 24.609 256 182 6 279 527 410 661 1.22e-11 68.2
Msa0010680 AT5G55840.3 21.290 310 236 6 224 527 298 605 1.32e-11 68.2
Msa0010680 AT1G13040.2 20.579 311 234 5 244 545 64 370 1.45e-11 67.4
Msa0010680 AT1G13040.1 20.579 311 234 5 244 545 64 370 1.45e-11 67.4
Msa0010680 AT3G04760.2 21.798 367 230 12 169 515 94 423 1.74e-11 67.4
Msa0010680 AT1G62590.2 20.968 248 189 5 284 526 216 461 1.85e-11 67.4
Msa0010680 AT1G62590.1 20.968 248 189 5 284 526 216 461 1.85e-11 67.4
Msa0010680 AT4G30825.1 19.830 353 274 6 174 519 157 507 2.15e-11 67.4
Msa0010680 AT1G03560.1 22.801 307 223 7 248 545 176 477 4.11e-11 66.2
Msa0010680 AT1G74900.1 19.424 278 218 4 295 567 93 369 4.39e-11 65.9
Msa0010680 AT3G18110.1 18.945 417 318 9 147 549 601 1011 4.40e-11 66.6
Msa0010680 AT1G63330.3 21.371 248 188 5 284 526 141 386 5.57e-11 65.9
Msa0010680 AT1G63330.1 21.371 248 188 5 284 526 141 386 5.57e-11 65.9
Msa0010680 AT1G63330.2 21.371 248 188 5 284 526 141 386 5.57e-11 65.9
Msa0010680 AT3G53170.3 20.870 345 205 12 222 555 162 449 7.95e-11 65.1
Msa0010680 AT5G40400.2 24.157 356 212 9 135 483 162 466 9.14e-11 65.5
Msa0010680 AT3G16890.1 20.417 240 182 3 275 508 162 398 9.20e-11 65.1
Msa0010680 AT5G40400.1 24.157 356 212 9 135 483 91 395 9.28e-11 65.1

Find 128 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTCCTCTAAAAGAATT+TGG 0.158452 1_1:+16190095 None:intergenic
TTGAGATGATGTCAATTAAA+TGG 0.218763 1_1:-16189494 Msa0010680:CDS
AACTTCTCCGTCCCGTAAAA+TGG 0.246857 1_1:+16191648 None:intergenic
CTGATGAAGTGGAGAGAATT+TGG 0.254386 1_1:-16189611 Msa0010680:CDS
TCAGGAGTACTGAGTAGTTT+TGG 0.262392 1_1:+16189460 None:intergenic
CACTACTTATATGACTATTA+TGG 0.264532 1_1:-16189247 Msa0010680:CDS
GTTTCGCCTTTATGCAATAC+TGG 0.268577 1_1:-16189640 Msa0010680:CDS
CCAAAGCTTTGTTGGGGAAT+AGG 0.275744 1_1:+16189058 None:intergenic
TAAGGATCTTATTAAGAAAA+TGG 0.276390 1_1:-16189403 Msa0010680:CDS
CTCAACAACTGGGTTGAAAA+AGG 0.276517 1_1:-16191378 Msa0010680:CDS
AATGTATGGAAGGGCTTTAC+AGG 0.281062 1_1:-16191298 Msa0010680:intron
CGAAGATGAGCTGGAGTTAT+CGG 0.335416 1_1:-16191505 Msa0010680:CDS
TTGATTCTACTCTCAACAAC+TGG 0.339450 1_1:-16191389 Msa0010680:CDS
ACAATAGCATCCCAGGTTAT+TGG 0.340568 1_1:+16189357 None:intergenic
TTACAATTGCTTTGAATAGT+TGG 0.343596 1_1:+16191430 None:intergenic
TTCAACAAAATGAGGGAGTT+AGG 0.346945 1_1:-16190008 Msa0010680:CDS
CCTTGCTGCAATTGAAGCTT+GGG 0.353288 1_1:-16189553 Msa0010680:CDS
ATTAAGAAAATGGAAGATAG+TGG 0.353631 1_1:-16189393 Msa0010680:CDS
GAAGATAGTGGGTGCATAAT+AGG 0.367444 1_1:-16189381 Msa0010680:CDS
TACAATTGCTTTGAATAGTT+GGG 0.368562 1_1:+16191431 None:intergenic
AATAGTTCCTAACGCTTTGT+TGG 0.376745 1_1:-16191688 Msa0010680:CDS
TCAAGGTATTGTTCTGCCTT+TGG 0.378886 1_1:+16190125 None:intergenic
CTGGCCAGCCAAAGCTTTGT+TGG 0.379748 1_1:+16189050 None:intergenic
ACCTTGCTGCAATTGAAGCT+TGG 0.380170 1_1:-16189554 Msa0010680:CDS
AGCTGACGTGTTACTTATGA+TGG 0.388204 1_1:-16189916 Msa0010680:CDS
ACTGGCTAACTGTGCTAGTC+TGG 0.389597 1_1:-16190057 Msa0010680:CDS
AACGCCAAACTACCGGCATA+TGG 0.391385 1_1:-16189108 Msa0010680:CDS
GGATTCGCCTCACTCGTCTA+AGG 0.395130 1_1:-16191833 Msa0010680:intron
AGAAAATCTTCTCTGCGTTA+TGG 0.396626 1_1:+16189199 None:intergenic
TGGCCAGCCAAAGCTTTGTT+GGG 0.397097 1_1:+16189051 None:intergenic
GATCCCATATGCCGGTAGTT+TGG 0.401653 1_1:+16189104 None:intergenic
AACTACCGGCATATGGGATC+AGG 0.402981 1_1:-16189101 Msa0010680:CDS
CAATCAAGCAAATCAGAAAC+TGG 0.408927 1_1:+16188997 None:intergenic
CTATCTCCATCCACTACATC+TGG 0.416001 1_1:+16191552 None:intergenic
ACTGCCCATGTTAGATGGTC+TGG 0.418967 1_1:+16189771 None:intergenic
TTGCAAGCAAATGCTGTAAC+AGG 0.420496 1_1:+16189981 None:intergenic
GCTAGGCATTATGCCTCAGC+CGG 0.427376 1_1:-16189744 Msa0010680:CDS
CTTCGAAGGCGTAGAATGTA+TGG 0.428188 1_1:-16191312 Msa0010680:CDS
CCATCTAACATGGGCAGTCT+TGG 0.435114 1_1:-16189766 Msa0010680:CDS
TAACATATAAAATAGGAGTA+AGG 0.438302 1_1:-16191943 Msa0010680:intron
CCTATTCCCCAACAAAGCTT+TGG 0.442635 1_1:-16189058 Msa0010680:CDS
CCAAGACTGCCCATGTTAGA+TGG 0.444557 1_1:+16189766 None:intergenic
CTTTGGCAGACCACGCAACT+TGG 0.445365 1_1:+16190142 None:intergenic
TGTGGGCTCTTCGTCGAGCT+TGG 0.446233 1_1:-16191854 Msa0010680:CDS
CCCTACCCAGTATTGCATAA+AGG 0.450361 1_1:+16189634 None:intergenic
AGCATGTCTAATGATATTGA+TGG 0.456122 1_1:-16189837 Msa0010680:CDS
TCTGGAAAATTTGAGGAAAA+CGG 0.461036 1_1:-16190039 Msa0010680:CDS
AAAACTTGAAAGACAATATG+TGG 0.463385 1_1:-16189677 Msa0010680:CDS
CACAAGAACAAGAAGCCACT+TGG 0.467123 1_1:+16191718 None:intergenic
CAAAGCTTTGGCTGGCCAGT+TGG 0.472143 1_1:-16189046 Msa0010680:CDS
GTGCTAGTCTGGAAAATTTG+AGG 0.473927 1_1:-16190046 Msa0010680:CDS
GCATAAAGGCGAAACAAAGT+TGG 0.475784 1_1:+16189648 None:intergenic
GTTTCTCTTTATGTTCGAGC+AGG 0.481571 1_1:-16189336 Msa0010680:CDS
TGAGGGTTTAAGCAGTCATT+CGG 0.485414 1_1:-16191898 Msa0010680:CDS
GCATAATAGGTCCAATAACC+TGG 0.486420 1_1:-16189368 Msa0010680:CDS
CCTTTATGCAATACTGGGTA+GGG 0.489551 1_1:-16189634 Msa0010680:CDS
TTCCCCAACAAAGCTTTGGC+TGG 0.490013 1_1:-16189054 Msa0010680:CDS
TGGGATTGAATGTTTGTAGT+TGG 0.496683 1_1:+16191450 None:intergenic
TCTTATAAATGAGAAGCAAC+TGG 0.497959 1_1:+16189958 None:intergenic
GCCTTTATGCAATACTGGGT+AGG 0.499816 1_1:-16189635 Msa0010680:CDS
CTGCAATTGAAGCTTGGGGA+AGG 0.502559 1_1:-16189548 Msa0010680:CDS
ACGCCAAACTACCGGCATAT+GGG 0.503470 1_1:-16189107 Msa0010680:CDS
AAGGATCAACTAGAGCCAAC+TGG 0.503578 1_1:+16189031 None:intergenic
GCGTATTCCAACAAAGCGTT+AGG 0.503910 1_1:+16191681 None:intergenic
TTCGTTCTGTGCTCTAGCAC+AGG 0.509261 1_1:-16189139 Msa0010680:CDS
TCGAGCAGGAGAAGTTGAAA+AGG 0.509366 1_1:-16189322 Msa0010680:CDS
AGGAAACATTCAACAAAATG+AGG 0.512047 1_1:-16190016 Msa0010680:CDS
TGAGTCAAAGCCTCGGGTTG+AGG 0.512371 1_1:-16189580 Msa0010680:CDS
GGCTTGTGAGTCAAAGCCTC+GGG 0.517693 1_1:-16189586 Msa0010680:CDS
GAAGATGAGCTGGAGTTATC+GGG 0.522179 1_1:-16191504 Msa0010680:CDS
CTGTGAGCAATATCAATATG+TGG 0.526461 1_1:-16191872 Msa0010680:CDS
AAGAGAAACAATAGCATCCC+AGG 0.527523 1_1:+16189350 None:intergenic
CGGCATATGGGATCAGGGAG+AGG 0.529325 1_1:-16189095 Msa0010680:CDS
CATAAAGGCGAAACAAAGTT+GGG 0.532648 1_1:+16189649 None:intergenic
TGGAACTGTAGGTCTTGGAT+TGG 0.536443 1_1:-16190229 Msa0010680:intron
TGCTCTTGAACAGTCTTCGA+AGG 0.538541 1_1:-16191326 Msa0010680:CDS
TCCTCACAAGCTACTGATGC+TGG 0.538942 1_1:-16191603 Msa0010680:CDS
AGACGACAACGAAGATGAGC+TGG 0.540409 1_1:-16191514 Msa0010680:CDS
TTTCGCCTTTATGCAATACT+GGG 0.543767 1_1:-16189639 Msa0010680:CDS
GCTATATTGAAGGAGATTGA+AGG 0.548918 1_1:-16189702 Msa0010680:CDS
ATTATTATACAGAACACTAC+TGG 0.551447 1_1:-16190075 Msa0010680:CDS
ACTGGGTAGGGCTGATGAAG+TGG 0.551487 1_1:-16189622 Msa0010680:CDS
GATTGAAGATCCAGATGTAG+TGG 0.554119 1_1:-16191562 Msa0010680:CDS
GTTAAGAGAATGAAGGCAGA+AGG 0.556181 1_1:-16189801 Msa0010680:CDS
CAAGTTGCGTGGTCTGCCAA+AGG 0.559337 1_1:-16190141 Msa0010680:CDS
TATGGAGCAGTATGCAAAGA+GGG 0.562326 1_1:-16189229 Msa0010680:CDS
TAACATGGGCAGTCTTGGCT+AGG 0.564587 1_1:-16189761 Msa0010680:CDS
CTCTCCCTGATCCCATATGC+CGG 0.566853 1_1:+16189096 None:intergenic
CGTGTTACTTATGATGGGAA+AGG 0.568209 1_1:-16189910 Msa0010680:CDS
TCAAATTGTTAAGAGAATGA+AGG 0.572470 1_1:-16189808 Msa0010680:CDS
CTAGGCATTATGCCTCAGCC+GGG 0.572474 1_1:-16189743 Msa0010680:CDS
AGGCTTGTGAGTCAAAGCCT+CGG 0.574660 1_1:-16189587 Msa0010680:CDS
TTGAACCAGACCATCTAACA+TGG 0.574663 1_1:-16189776 Msa0010680:CDS
TTAAGAAAATGGAAGATAGT+GGG 0.575867 1_1:-16189392 Msa0010680:CDS
TAAGATGCTAGACAAGGGTA+AGG 0.575956 1_1:-16189421 Msa0010680:CDS
GAAGAAAATTGAAGAAGCAG+AGG 0.582805 1_1:-16189523 Msa0010680:CDS
GAAGGCGTAGAATGTATGGA+AGG 0.591400 1_1:-16191308 Msa0010680:CDS
AAGAATTTGGAACATGCTCA+AGG 0.593893 1_1:+16190108 None:intergenic
GAAGATCCAGATGTAGTGGA+TGG 0.596970 1_1:-16191558 Msa0010680:CDS
GATTTGATTGCCAAGTTGCG+TGG 0.599545 1_1:-16190152 Msa0010680:CDS
TACTCCTGAAAATTTATACA+AGG 0.599938 1_1:-16189446 Msa0010680:CDS
TGAAGTGGAGAGAATTTGGA+AGG 0.601261 1_1:-16189607 Msa0010680:CDS
TTGATTACCTTAGACGAGTG+AGG 0.605160 1_1:+16191826 None:intergenic
ACCAGCATCAGTAGCTTGTG+AGG 0.609145 1_1:+16191602 None:intergenic
GGAAACATTCAACAAAATGA+GGG 0.611621 1_1:-16190015 Msa0010680:CDS
ACTACCGGCATATGGGATCA+GGG 0.615630 1_1:-16189100 Msa0010680:CDS
CCCAAGCTTCAATTGCAGCA+AGG 0.616183 1_1:+16189553 None:intergenic
TGATGCTGGTAGCAAGAACA+AGG 0.618306 1_1:-16191589 Msa0010680:CDS
GTCATATAAGTAGTGAACAA+TGG 0.618693 1_1:+16189255 None:intergenic
TGTGAGCAATATCAATATGT+GGG 0.620569 1_1:-16191871 Msa0010680:CDS
GCTGACGTGTTACTTATGAT+GGG 0.621760 1_1:-16189915 Msa0010680:CDS
GGCCAGCCAAAGCTTTGTTG+GGG 0.625192 1_1:+16189052 None:intergenic
TGATTCTACTCTCAACAACT+GGG 0.629471 1_1:-16191388 Msa0010680:CDS
CATAATAGGTCCAATAACCT+GGG 0.633389 1_1:-16189367 Msa0010680:CDS
TAATTTGTGTAGAAACCAAG+TGG 0.633589 1_1:-16191733 Msa0010680:intron
CTTGCTGCAATTGAAGCTTG+GGG 0.638499 1_1:-16189552 Msa0010680:CDS
AAGGCGTAGAATGTATGGAA+GGG 0.649552 1_1:-16191307 Msa0010680:CDS
GGAAAGTTGACGTCTGCTCA+CGG 0.649724 1_1:+16191623 None:intergenic
AAACTTGAAAGACAATATGT+GGG 0.657774 1_1:-16189676 Msa0010680:CDS
GGAAAATTTGAGGAAAACGG+AGG 0.667007 1_1:-16190036 Msa0010680:CDS
GCAAGGTAGTCCTCAACCCG+AGG 0.668805 1_1:+16189570 None:intergenic
GTTGTTGAGAGTAGAATCAA+CGG 0.672383 1_1:+16191392 None:intergenic
AGGCATAAGATGCTAGACAA+GGG 0.673561 1_1:-16189426 Msa0010680:CDS
AAGGCATAAGATGCTAGACA+AGG 0.675869 1_1:-16189427 Msa0010680:CDS
TTATGGAGCAGTATGCAAAG+AGG 0.687746 1_1:-16189230 Msa0010680:CDS
ATGGAGCAGTATGCAAAGAG+GGG 0.702068 1_1:-16189228 Msa0010680:CDS
TGAACCAGACCATCTAACAT+GGG 0.719309 1_1:-16189775 Msa0010680:CDS
TGCTGGTAGCAAGAACAAGG+AGG 0.724439 1_1:-16191586 Msa0010680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATAAATTAACATATAAAAT+AGG - chr1_1:16189071-16189090 Msa0010680:CDS 10.0%
!! AATTAAAACATTAAACATTA+TGG + chr1_1:16190736-16190755 None:intergenic 10.0%
!!! AATTTATGACAACAAATTTT+GGG + chr1_1:16189059-16189078 None:intergenic 15.0%
!!! TAATTTATGACAACAAATTT+TGG + chr1_1:16189060-16189079 None:intergenic 15.0%
!! TTATTCTATTAAAGAATACA+TGG + chr1_1:16189811-16189830 None:intergenic 15.0%
!! GTATTCTTTAATAGAATAAA+TGG - chr1_1:16189812-16189831 Msa0010680:CDS 15.0%
!! TAATCAACATGTTAATTTAT+TGG + chr1_1:16190199-16190218 None:intergenic 15.0%
!!! GTATTGAACTAAGATTTTAA+AGG + chr1_1:16189032-16189051 None:intergenic 20.0%
!!! ATTTATGACAACAAATTTTG+GGG + chr1_1:16189058-16189077 None:intergenic 20.0%
!! TAACATATAAAATAGGAGTA+AGG - chr1_1:16189078-16189097 Msa0010680:CDS 20.0%
!! ATATAATCTATATGCCAAAA+TGG + chr1_1:16190574-16190593 None:intergenic 20.0%
!!! ATTTATCTTGTTTATGTTTC+TGG - chr1_1:16190708-16190727 Msa0010680:intron 20.0%
!!! ATTTTATAAGTATAAGGAGA+AGG + chr1_1:16191148-16191167 None:intergenic 20.0%
!! TAAGGATCTTATTAAGAAAA+TGG - chr1_1:16191618-16191637 Msa0010680:CDS 20.0%
!! TTTATGACAACAAATTTTGG+GGG + chr1_1:16189057-16189076 None:intergenic 25.0%
!! TAAAATAGGAGTAAGGTTTT+TGG - chr1_1:16189085-16189104 Msa0010680:CDS 25.0%
!! AAAATAGGAGTAAGGTTTTT+GGG - chr1_1:16189086-16189105 Msa0010680:CDS 25.0%
!! TACAATTGCTTTGAATAGTT+GGG + chr1_1:16189593-16189612 None:intergenic 25.0%
!! TTACAATTGCTTTGAATAGT+TGG + chr1_1:16189594-16189613 None:intergenic 25.0%
! CTATTAAAGAATACATGGAA+TGG + chr1_1:16189806-16189825 None:intergenic 25.0%
! CAAAAGATGAAAAGAAACAA+AGG + chr1_1:16190316-16190335 None:intergenic 25.0%
!!! GTTTATCGTTTTTCTTTCTT+TGG - chr1_1:16190768-16190787 Msa0010680:intron 25.0%
!! AATTCTCCTCTAAAAGAATT+TGG + chr1_1:16190929-16190948 None:intergenic 25.0%
! ATTATTATACAGAACACTAC+TGG - chr1_1:16190946-16190965 Msa0010680:intron 25.0%
! TCAAATTGTTAAGAGAATGA+AGG - chr1_1:16191213-16191232 Msa0010680:intron 25.0%
! AAAAACTGAAGCTATATTGA+AGG - chr1_1:16191309-16191328 Msa0010680:CDS 25.0%
! AAAACTTGAAAGACAATATG+TGG - chr1_1:16191344-16191363 Msa0010680:CDS 25.0%
! AAACTTGAAAGACAATATGT+GGG - chr1_1:16191345-16191364 Msa0010680:CDS 25.0%
! TTGAGATGATGTCAATTAAA+TGG - chr1_1:16191527-16191546 Msa0010680:intron 25.0%
! TACTCCTGAAAATTTATACA+AGG - chr1_1:16191575-16191594 Msa0010680:CDS 25.0%
!! TATGCCTTGTATAAATTTTC+AGG + chr1_1:16191582-16191601 None:intergenic 25.0%
! ATTAAGAAAATGGAAGATAG+TGG - chr1_1:16191628-16191647 Msa0010680:CDS 25.0%
! TTAAGAAAATGGAAGATAGT+GGG - chr1_1:16191629-16191648 Msa0010680:CDS 25.0%
! CACTACTTATATGACTATTA+TGG - chr1_1:16191774-16191793 Msa0010680:intron 25.0%
GATTGTCGAGATTTACAATT+TGG + chr1_1:16189010-16189029 None:intergenic 30.0%
TGTGAGCAATATCAATATGT+GGG - chr1_1:16189150-16189169 Msa0010680:CDS 30.0%
AATACTGGTAAAGAAGAATG+AGG + chr1_1:16189225-16189244 None:intergenic 30.0%
! TAATTTGTGTAGAAACCAAG+TGG - chr1_1:16189288-16189307 Msa0010680:CDS 30.0%
AAAAAGGTAAGGAATTAAGC+AGG - chr1_1:16189659-16189678 Msa0010680:CDS 30.0%
AAAGAATACATGGAATGGAA+TGG + chr1_1:16189801-16189820 None:intergenic 30.0%
AATGAGTTAGAATACATCAC+TGG - chr1_1:16189909-16189928 Msa0010680:CDS 30.0%
ATGATGCTTTGTATAATGCA+GGG + chr1_1:16189941-16189960 None:intergenic 30.0%
AAAATCACCAGTAAACAAGT+GGG + chr1_1:16190100-16190119 None:intergenic 30.0%
AAAAATCACCAGTAAACAAG+TGG + chr1_1:16190101-16190120 None:intergenic 30.0%
TTGGCTGAAAAAAAATACTG+GGG + chr1_1:16190129-16190148 None:intergenic 30.0%
CTTGGCTGAAAAAAAATACT+GGG + chr1_1:16190130-16190149 None:intergenic 30.0%
ACTTGGCTGAAAAAAAATAC+TGG + chr1_1:16190131-16190150 None:intergenic 30.0%
GATTCATACATTCTCATTGT+TGG - chr1_1:16190235-16190254 Msa0010680:intron 30.0%
TAAGTTGTATCCATAACCTT+TGG - chr1_1:16190434-16190453 Msa0010680:intron 30.0%
!! ATCGTTTTTCTTTCTTTGGT+TGG - chr1_1:16190772-16190791 Msa0010680:intron 30.0%
! CATGTTCCAAATTCTTTTAG+AGG - chr1_1:16190920-16190939 Msa0010680:intron 30.0%
TCTGGAAAATTTGAGGAAAA+CGG - chr1_1:16190982-16191001 Msa0010680:intron 30.0%
AGGAAACATTCAACAAAATG+AGG - chr1_1:16191005-16191024 Msa0010680:intron 30.0%
GGAAACATTCAACAAAATGA+GGG - chr1_1:16191006-16191025 Msa0010680:intron 30.0%
TCTTATAAATGAGAAGCAAC+TGG + chr1_1:16191066-16191085 None:intergenic 30.0%
AGCATGTCTAATGATATTGA+TGG - chr1_1:16191184-16191203 Msa0010680:intron 30.0%
!!! TTCAGTTTTTTCTATAAGCC+CGG + chr1_1:16191299-16191318 None:intergenic 30.0%
GTCATATAAGTAGTGAACAA+TGG + chr1_1:16191769-16191788 None:intergenic 30.0%
TTATAAAAACGCCAAACTAC+CGG - chr1_1:16191906-16191925 Msa0010680:intron 30.0%
CTGTGAGCAATATCAATATG+TGG - chr1_1:16189149-16189168 Msa0010680:CDS 35.0%
AATAGTTCCTAACGCTTTGT+TGG - chr1_1:16189333-16189352 Msa0010680:CDS 35.0%
!! GCTGATTCTCATCCATTTTA+CGG - chr1_1:16189361-16189380 Msa0010680:CDS 35.0%
! CTGATTCTCATCCATTTTAC+GGG - chr1_1:16189362-16189381 Msa0010680:CDS 35.0%
TGGGATTGAATGTTTGTAGT+TGG + chr1_1:16189574-16189593 None:intergenic 35.0%
GTTGTTGAGAGTAGAATCAA+CGG + chr1_1:16189632-16189651 None:intergenic 35.0%
TTGATTCTACTCTCAACAAC+TGG - chr1_1:16189632-16189651 Msa0010680:CDS 35.0%
TGATTCTACTCTCAACAACT+GGG - chr1_1:16189633-16189652 Msa0010680:CDS 35.0%
ATAGCACAGCTTCATATCAT+AGG - chr1_1:16189774-16189793 Msa0010680:CDS 35.0%
GATGATGCTTTGTATAATGC+AGG + chr1_1:16189942-16189961 None:intergenic 35.0%
TTGGTTCCTAAATCCCAATA+CGG - chr1_1:16189995-16190014 Msa0010680:CDS 35.0%
CAATGGAAAGAAGAATGAAG+TGG + chr1_1:16190034-16190053 None:intergenic 35.0%
CACTTCATTCTTCTTTCCAT+TGG - chr1_1:16190032-16190051 Msa0010680:CDS 35.0%
GCCAGAAAATTAACCATAAC+CGG + chr1_1:16190177-16190196 None:intergenic 35.0%
CTCGTGAGATCAAAATTTGT+TGG + chr1_1:16190365-16190384 None:intergenic 35.0%
GGTTATGGATACAACTTACA+AGG + chr1_1:16190432-16190451 None:intergenic 35.0%
ATCCATAACCTTTGGTATAG+TGG - chr1_1:16190442-16190461 Msa0010680:intron 35.0%
! CATCTTGTTATAGCAGTCTT+GGG - chr1_1:16190466-16190485 Msa0010680:intron 35.0%
! ATCTTGTTATAGCAGTCTTG+GGG - chr1_1:16190467-16190486 Msa0010680:intron 35.0%
!!! GGAATGGTTTGTTTCCATTT+TGG - chr1_1:16190557-16190576 Msa0010680:intron 35.0%
!!! TTTTCATCCGTTGATTTTGC+AGG - chr1_1:16190611-16190630 Msa0010680:intron 35.0%
! AAGAATTTGGAACATGCTCA+AGG + chr1_1:16190916-16190935 None:intergenic 35.0%
TTCAACAAAATGAGGGAGTT+AGG - chr1_1:16191013-16191032 Msa0010680:intron 35.0%
GCTATATTGAAGGAGATTGA+AGG - chr1_1:16191319-16191338 Msa0010680:CDS 35.0%
CATAAAGGCGAAACAAAGTT+GGG + chr1_1:16191375-16191394 None:intergenic 35.0%
TTTCGCCTTTATGCAATACT+GGG - chr1_1:16191382-16191401 Msa0010680:CDS 35.0%
GAAGAAAATTGAAGAAGCAG+AGG - chr1_1:16191498-16191517 Msa0010680:CDS 35.0%
CATAATAGGTCCAATAACCT+GGG - chr1_1:16191654-16191673 Msa0010680:CDS 35.0%
AGAAAATCTTCTCTGCGTTA+TGG + chr1_1:16191825-16191844 None:intergenic 35.0%
! GAAACTGGAGTTTTCCTAAA+AGG + chr1_1:16192012-16192031 None:intergenic 35.0%
CAATCAAGCAAATCAGAAAC+TGG + chr1_1:16192027-16192046 None:intergenic 35.0%
!! TGGGTTTTGCTTTAAGCTTG+AGG - chr1_1:16189105-16189124 Msa0010680:CDS 40.0%
!! GGGTTTTGCTTTAAGCTTGA+GGG - chr1_1:16189106-16189125 Msa0010680:CDS 40.0%
TGAGGGTTTAAGCAGTCATT+CGG - chr1_1:16189123-16189142 Msa0010680:CDS 40.0%
TTGATTACCTTAGACGAGTG+AGG + chr1_1:16189198-16189217 None:intergenic 40.0%
! TTCTCATCCATTTTACGGGA+CGG - chr1_1:16189366-16189385 Msa0010680:CDS 40.0%
GATTGAAGATCCAGATGTAG+TGG - chr1_1:16189459-16189478 Msa0010680:CDS 40.0%
! CTCAACAACTGGGTTGAAAA+AGG - chr1_1:16189643-16189662 Msa0010680:CDS 40.0%
! CAACTGGGTTGAAAAAGGTA+AGG - chr1_1:16189648-16189667 Msa0010680:CDS 40.0%
AAGGCGTAGAATGTATGGAA+GGG - chr1_1:16189714-16189733 Msa0010680:CDS 40.0%
AATGTATGGAAGGGCTTTAC+AGG - chr1_1:16189723-16189742 Msa0010680:CDS 40.0%
GAGTTAGAATACATCACTGG+TGG - chr1_1:16189912-16189931 Msa0010680:CDS 40.0%
ATGCTTTGTATAATGCAGGG+AGG + chr1_1:16189938-16189957 None:intergenic 40.0%
!!! CATCTCGTGTTTTGATTGAG+TGG - chr1_1:16189958-16189977 Msa0010680:CDS 40.0%
ATTTAGGAACCAACCAGCAA+TGG + chr1_1:16189988-16190007 None:intergenic 40.0%
TGGTTCCTAAATCCCAATAC+GGG - chr1_1:16189996-16190015 Msa0010680:CDS 40.0%
TGAAAGTTCAACACAGAGGT+GGG + chr1_1:16190073-16190092 None:intergenic 40.0%
ATGCTGAAAGTTCAACACAG+AGG + chr1_1:16190077-16190096 None:intergenic 40.0%
! GCCGGTTATGGTTAATTTTC+TGG - chr1_1:16190173-16190192 Msa0010680:CDS 40.0%
TAAGTTAGACGAGAGAGAGT+GGG + chr1_1:16190287-16190306 None:intergenic 40.0%
ATAAGTTAGACGAGAGAGAG+TGG + chr1_1:16190288-16190307 None:intergenic 40.0%
CCAAGACTGCTATAACAAGA+TGG + chr1_1:16190468-16190487 None:intergenic 40.0%
! CCATCTTGTTATAGCAGTCT+TGG - chr1_1:16190465-16190484 Msa0010680:intron 40.0%
TGGGGTTGACAACTAAAGTT+AGG - chr1_1:16190520-16190539 Msa0010680:intron 40.0%
ACAACTAAAGTTAGGCCAGA+AGG - chr1_1:16190528-16190547 Msa0010680:intron 40.0%
CAACTAAAGTTAGGCCAGAA+GGG - chr1_1:16190529-16190548 Msa0010680:intron 40.0%
AACTAAAGTTAGGCCAGAAG+GGG - chr1_1:16190530-16190549 Msa0010680:intron 40.0%
CAACATGCCTGCAAAATCAA+CGG + chr1_1:16190621-16190640 None:intergenic 40.0%
CTTTCTTTGGTTGGAACTGT+AGG - chr1_1:16190781-16190800 Msa0010680:intron 40.0%
!! TCAAGGTATTGTTCTGCCTT+TGG + chr1_1:16190899-16190918 None:intergenic 40.0%
! GTGCTAGTCTGGAAAATTTG+AGG - chr1_1:16190975-16190994 Msa0010680:intron 40.0%
GGAAAATTTGAGGAAAACGG+AGG - chr1_1:16190985-16191004 Msa0010680:intron 40.0%
TTGCAAGCAAATGCTGTAAC+AGG + chr1_1:16191043-16191062 None:intergenic 40.0%
!! AGCTGACGTGTTACTTATGA+TGG - chr1_1:16191105-16191124 Msa0010680:intron 40.0%
!! GCTGACGTGTTACTTATGAT+GGG - chr1_1:16191106-16191125 Msa0010680:intron 40.0%
!! CGTGTTACTTATGATGGGAA+AGG - chr1_1:16191111-16191130 Msa0010680:intron 40.0%
GTTAAGAGAATGAAGGCAGA+AGG - chr1_1:16191220-16191239 Msa0010680:intron 40.0%
TTGAACCAGACCATCTAACA+TGG - chr1_1:16191245-16191264 Msa0010680:intron 40.0%
TGAACCAGACCATCTAACAT+GGG - chr1_1:16191246-16191265 Msa0010680:intron 40.0%
GCATAAAGGCGAAACAAAGT+TGG + chr1_1:16191376-16191395 None:intergenic 40.0%
GTTTCGCCTTTATGCAATAC+TGG - chr1_1:16191381-16191400 Msa0010680:CDS 40.0%
CCTTTATGCAATACTGGGTA+GGG - chr1_1:16191387-16191406 Msa0010680:CDS 40.0%
CTGATGAAGTGGAGAGAATT+TGG - chr1_1:16191410-16191429 Msa0010680:CDS 40.0%
TGAAGTGGAGAGAATTTGGA+AGG - chr1_1:16191414-16191433 Msa0010680:CDS 40.0%
!!! CAGGAGTACTGAGTAGTTTT+GGG + chr1_1:16191563-16191582 None:intergenic 40.0%
!!! TCAGGAGTACTGAGTAGTTT+TGG + chr1_1:16191564-16191583 None:intergenic 40.0%
AAGGCATAAGATGCTAGACA+AGG - chr1_1:16191594-16191613 Msa0010680:CDS 40.0%
AGGCATAAGATGCTAGACAA+GGG - chr1_1:16191595-16191614 Msa0010680:CDS 40.0%
TAAGATGCTAGACAAGGGTA+AGG - chr1_1:16191600-16191619 Msa0010680:CDS 40.0%
!! GAAGATAGTGGGTGCATAAT+AGG - chr1_1:16191640-16191659 Msa0010680:CDS 40.0%
GCATAATAGGTCCAATAACC+TGG - chr1_1:16191653-16191672 Msa0010680:CDS 40.0%
ACAATAGCATCCCAGGTTAT+TGG + chr1_1:16191667-16191686 None:intergenic 40.0%
AAGAGAAACAATAGCATCCC+AGG + chr1_1:16191674-16191693 None:intergenic 40.0%
GTTTCTCTTTATGTTCGAGC+AGG - chr1_1:16191685-16191704 Msa0010680:CDS 40.0%
TTATGGAGCAGTATGCAAAG+AGG - chr1_1:16191791-16191810 Msa0010680:intron 40.0%
TATGGAGCAGTATGCAAAGA+GGG - chr1_1:16191792-16191811 Msa0010680:intron 40.0%
!!! TGGCTCTAGTTGATCCTTTT+AGG - chr1_1:16191995-16192014 Msa0010680:intron 40.0%
CACAAGAACAAGAAGCCACT+TGG + chr1_1:16189306-16189325 None:intergenic 45.0%
! GCGTATTCCAACAAAGCGTT+AGG + chr1_1:16189343-16189362 None:intergenic 45.0%
AACTTCTCCGTCCCGTAAAA+TGG + chr1_1:16189376-16189395 None:intergenic 45.0%
TGATGCTGGTAGCAAGAACA+AGG - chr1_1:16189432-16189451 Msa0010680:CDS 45.0%
! GAAGATCCAGATGTAGTGGA+TGG - chr1_1:16189463-16189482 Msa0010680:CDS 45.0%
CTATCTCCATCCACTACATC+TGG + chr1_1:16189472-16189491 None:intergenic 45.0%
CGAAGATGAGCTGGAGTTAT+CGG - chr1_1:16189516-16189535 Msa0010680:CDS 45.0%
GAAGATGAGCTGGAGTTATC+GGG - chr1_1:16189517-16189536 Msa0010680:CDS 45.0%
TGCTCTTGAACAGTCTTCGA+AGG - chr1_1:16189695-16189714 Msa0010680:CDS 45.0%
! CTTCGAAGGCGTAGAATGTA+TGG - chr1_1:16189709-16189728 Msa0010680:CDS 45.0%
! GAAGGCGTAGAATGTATGGA+AGG - chr1_1:16189713-16189732 Msa0010680:CDS 45.0%
!!! TCGTGTTTTGATTGAGTGGC+CGG - chr1_1:16189962-16189981 Msa0010680:CDS 45.0%
GGTTCCTAAATCCCAATACG+GGG - chr1_1:16189997-16190016 Msa0010680:CDS 45.0%
GTTCCTAAATCCCAATACGG+GGG - chr1_1:16189998-16190017 Msa0010680:CDS 45.0%
TTCCTAAATCCCAATACGGG+GGG - chr1_1:16189999-16190018 Msa0010680:CDS 45.0%
GAAAGTTCAACACAGAGGTG+GGG + chr1_1:16190072-16190091 None:intergenic 45.0%
CTGAAAGTTCAACACAGAGG+TGG + chr1_1:16190074-16190093 None:intergenic 45.0%
TCAGCATCCCACTTGTTTAC+TGG - chr1_1:16190090-16190109 Msa0010680:CDS 45.0%
! GACAGTAACAGAAGTGGACT+TGG + chr1_1:16190148-16190167 None:intergenic 45.0%
CCAGAAGACAGTAACAGAAG+TGG + chr1_1:16190154-16190173 None:intergenic 45.0%
CCACTTCTGTTACTGTCTTC+TGG - chr1_1:16190151-16190170 Msa0010680:CDS 45.0%
TTCTGTTACTGTCTTCTGGC+CGG - chr1_1:16190155-16190174 Msa0010680:CDS 45.0%
GGCCACTATACCAAAGGTTA+TGG + chr1_1:16190447-16190466 None:intergenic 45.0%
CAAGATGGCCACTATACCAA+AGG + chr1_1:16190453-16190472 None:intergenic 45.0%
TTGGTTGGAACTGTAGGTCT+TGG - chr1_1:16190787-16190806 Msa0010680:intron 45.0%
TGGAACTGTAGGTCTTGGAT+TGG - chr1_1:16190792-16190811 Msa0010680:intron 45.0%
GATTTGATTGCCAAGTTGCG+TGG - chr1_1:16190869-16190888 Msa0010680:intron 45.0%
! TTTTTCTATAAGCCCGGCTG+AGG + chr1_1:16191293-16191312 None:intergenic 45.0%
GCCTTTATGCAATACTGGGT+AGG - chr1_1:16191386-16191405 Msa0010680:CDS 45.0%
CCCTACCCAGTATTGCATAA+AGG + chr1_1:16191390-16191409 None:intergenic 45.0%
ACCTTGCTGCAATTGAAGCT+TGG - chr1_1:16191467-16191486 Msa0010680:CDS 45.0%
CCTTGCTGCAATTGAAGCTT+GGG - chr1_1:16191468-16191487 Msa0010680:CDS 45.0%
CTTGCTGCAATTGAAGCTTG+GGG - chr1_1:16191469-16191488 Msa0010680:CDS 45.0%
!!! GAGTACTGAGTAGTTTTGGG+CGG + chr1_1:16191560-16191579 None:intergenic 45.0%
TCGAGCAGGAGAAGTTGAAA+AGG - chr1_1:16191699-16191718 Msa0010680:CDS 45.0%
ATGGAGCAGTATGCAAAGAG+GGG - chr1_1:16191793-16191812 Msa0010680:intron 45.0%
!! CCAAAGCTTTGTTGGGGAAT+AGG + chr1_1:16191966-16191985 None:intergenic 45.0%
CCTATTCCCCAACAAAGCTT+TGG - chr1_1:16191963-16191982 Msa0010680:intron 45.0%
AAGGATCAACTAGAGCCAAC+TGG + chr1_1:16191993-16192012 None:intergenic 45.0%
!! AATAATAATAATAATAATAC+TGG + chr1_1:16189240-16189259 None:intergenic 5.0%
!!! ATTAAAATTTTATAAGTATA+AGG + chr1_1:16191154-16191173 None:intergenic 5.0%
GGAAAGTTGACGTCTGCTCA+CGG + chr1_1:16189401-16189420 None:intergenic 50.0%
TCCTCACAAGCTACTGATGC+TGG - chr1_1:16189418-16189437 Msa0010680:CDS 50.0%
! ACCAGCATCAGTAGCTTGTG+AGG + chr1_1:16189422-16189441 None:intergenic 50.0%
TGCTGGTAGCAAGAACAAGG+AGG - chr1_1:16189435-16189454 Msa0010680:CDS 50.0%
AGACGACAACGAAGATGAGC+TGG - chr1_1:16189507-16189526 Msa0010680:CDS 50.0%
TCCTAAATCCCAATACGGGG+GGG - chr1_1:16190000-16190019 Msa0010680:CDS 50.0%
TACTGTCTTCTGGCCGGTTA+TGG - chr1_1:16190161-16190180 Msa0010680:CDS 50.0%
GTCATTCCATGCAGCTCTCT+GGG - chr1_1:16190501-16190520 Msa0010680:intron 50.0%
TCATTCCATGCAGCTCTCTG+GGG - chr1_1:16190502-16190521 Msa0010680:intron 50.0%
ACTGGCTAACTGTGCTAGTC+TGG - chr1_1:16190964-16190983 Msa0010680:intron 50.0%
ACTGCCCATGTTAGATGGTC+TGG + chr1_1:16191253-16191272 None:intergenic 50.0%
CCAAGACTGCCCATGTTAGA+TGG + chr1_1:16191258-16191277 None:intergenic 50.0%
CCATCTAACATGGGCAGTCT+TGG - chr1_1:16191255-16191274 Msa0010680:intron 50.0%
TAACATGGGCAGTCTTGGCT+AGG - chr1_1:16191260-16191279 Msa0010680:intron 50.0%
AGGCTTGTGAGTCAAAGCCT+CGG - chr1_1:16191434-16191453 Msa0010680:CDS 50.0%
CCCAAGCTTCAATTGCAGCA+AGG + chr1_1:16191471-16191490 None:intergenic 50.0%
CTGCAATTGAAGCTTGGGGA+AGG - chr1_1:16191473-16191492 Msa0010680:CDS 50.0%
TTCGTTCTGTGCTCTAGCAC+AGG - chr1_1:16191882-16191901 Msa0010680:CDS 50.0%
AACGCCAAACTACCGGCATA+TGG - chr1_1:16191913-16191932 Msa0010680:intron 50.0%
ACGCCAAACTACCGGCATAT+GGG - chr1_1:16191914-16191933 Msa0010680:intron 50.0%
GATCCCATATGCCGGTAGTT+TGG + chr1_1:16191920-16191939 None:intergenic 50.0%
AACTACCGGCATATGGGATC+AGG - chr1_1:16191920-16191939 Msa0010680:intron 50.0%
ACTACCGGCATATGGGATCA+GGG - chr1_1:16191921-16191940 Msa0010680:intron 50.0%
! TTCCCCAACAAAGCTTTGGC+TGG - chr1_1:16191967-16191986 Msa0010680:intron 50.0%
!! TGGCCAGCCAAAGCTTTGTT+GGG + chr1_1:16191973-16191992 None:intergenic 50.0%
GGATTCGCCTCACTCGTCTA+AGG - chr1_1:16189188-16189207 Msa0010680:CDS 55.0%
AGGAACCAACCAGCAATGGC+CGG + chr1_1:16189984-16190003 None:intergenic 55.0%
AGATTTCGCCCCCCCGTATT+GGG + chr1_1:16190011-16190030 None:intergenic 55.0%
GGCAGTGGGATTTCGTCCAA+TGG + chr1_1:16190051-16190070 None:intergenic 55.0%
ATAGCAGTCTTGGGGTTGCC+AGG - chr1_1:16190475-16190494 Msa0010680:intron 55.0%
GCTGCATGGAATGACCAACC+TGG + chr1_1:16190496-16190515 None:intergenic 55.0%
GGTCATTCCATGCAGCTCTC+TGG - chr1_1:16190500-16190519 Msa0010680:intron 55.0%
AAGTTAGGCCAGAAGGGGAG+CGG - chr1_1:16190535-16190554 Msa0010680:intron 55.0%
CTTTGGCAGACCACGCAACT+TGG + chr1_1:16190882-16190901 None:intergenic 55.0%
CAAGTTGCGTGGTCTGCCAA+AGG - chr1_1:16190880-16190899 Msa0010680:intron 55.0%
GCTAGGCATTATGCCTCAGC+CGG - chr1_1:16191277-16191296 Msa0010680:intron 55.0%
CTAGGCATTATGCCTCAGCC+GGG - chr1_1:16191278-16191297 Msa0010680:intron 55.0%
ACTGGGTAGGGCTGATGAAG+TGG - chr1_1:16191399-16191418 Msa0010680:CDS 55.0%
GGCTTGTGAGTCAAAGCCTC+GGG - chr1_1:16191435-16191454 Msa0010680:CDS 55.0%
! TGAGTCAAAGCCTCGGGTTG+AGG - chr1_1:16191441-16191460 Msa0010680:CDS 55.0%
! GGCAGACGACGTTTTGCAGA+AGG - chr1_1:16191720-16191739 Msa0010680:CDS 55.0%
CTCTCCCTGATCCCATATGC+CGG + chr1_1:16191928-16191947 None:intergenic 55.0%
!! GGCCAGCCAAAGCTTTGTTG+GGG + chr1_1:16191972-16191991 None:intergenic 55.0%
! CTGGCCAGCCAAAGCTTTGT+TGG + chr1_1:16191974-16191993 None:intergenic 55.0%
! CAAAGCTTTGGCTGGCCAGT+TGG - chr1_1:16191975-16191994 Msa0010680:intron 55.0%
TGTGGGCTCTTCGTCGAGCT+TGG - chr1_1:16189167-16189186 Msa0010680:CDS 60.0%
ATTGAGTGGCCGGCCATTGC+TGG - chr1_1:16189972-16189991 Msa0010680:CDS 60.0%
GCCCCCCCGTATTGGGATTT+AGG + chr1_1:16190004-16190023 None:intergenic 60.0%
GAGATTTCGCCCCCCCGTAT+TGG + chr1_1:16190012-16190031 None:intergenic 60.0%
CAACACAGAGGTGGGGCAGT+GGG + chr1_1:16190065-16190084 None:intergenic 60.0%
TCAACACAGAGGTGGGGCAG+TGG + chr1_1:16190066-16190085 None:intergenic 60.0%
GAGAGAGTGGGAGCAGAGTG+AGG + chr1_1:16190275-16190294 None:intergenic 60.0%
CAGTCTTGGGGTTGCCAGGT+TGG - chr1_1:16190479-16190498 Msa0010680:intron 60.0%
GTCAACCCCAGAGAGCTGCA+TGG + chr1_1:16190510-16190529 None:intergenic 60.0%
AGTTAGGCCAGAAGGGGAGC+GGG - chr1_1:16190536-16190555 Msa0010680:intron 60.0%
AACCATTCCCGCTCCCCTTC+TGG + chr1_1:16190546-16190565 None:intergenic 60.0%
GCAAGGTAGTCCTCAACCCG+AGG + chr1_1:16191454-16191473 None:intergenic 60.0%
CGGCATATGGGATCAGGGAG+AGG - chr1_1:16191926-16191945 Msa0010680:intron 60.0%
AGTGGCCGGCCATTGCTGGT+TGG - chr1_1:16189976-16189995 Msa0010680:CDS 65.0%
GGCCAGAAGGGGAGCGGGAA+TGG - chr1_1:16190541-16190560 Msa0010680:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 16188996 16192047 16188996 ID=Msa0010680;Name=Msa0010680
chr1_1 mRNA 16188996 16192047 16188996 ID=Msa0010680-mRNA-1;Parent=Msa0010680;Name=Msa0010680-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.2|0|0.66|0.2|0.33|6|0|590
chr1_1 exon 16192043 16192047 16192043 ID=Msa0010680-mRNA-1:exon:5931;Parent=Msa0010680-mRNA-1
chr1_1 exon 16191944 16191950 16191944 ID=Msa0010680-mRNA-1:exon:5930;Parent=Msa0010680-mRNA-1
chr1_1 exon 16191834 16191922 16191834 ID=Msa0010680-mRNA-1:exon:5929;Parent=Msa0010680-mRNA-1
chr1_1 exon 16191553 16191743 16191553 ID=Msa0010680-mRNA-1:exon:5928;Parent=Msa0010680-mRNA-1
chr1_1 exon 16191299 16191534 16191299 ID=Msa0010680-mRNA-1:exon:5927;Parent=Msa0010680-mRNA-1
chr1_1 exon 16188996 16190240 16188996 ID=Msa0010680-mRNA-1:exon:5926;Parent=Msa0010680-mRNA-1
chr1_1 CDS 16192043 16192047 16192043 ID=Msa0010680-mRNA-1:cds;Parent=Msa0010680-mRNA-1
chr1_1 CDS 16191944 16191950 16191944 ID=Msa0010680-mRNA-1:cds;Parent=Msa0010680-mRNA-1
chr1_1 CDS 16191834 16191922 16191834 ID=Msa0010680-mRNA-1:cds;Parent=Msa0010680-mRNA-1
chr1_1 CDS 16191553 16191743 16191553 ID=Msa0010680-mRNA-1:cds;Parent=Msa0010680-mRNA-1
chr1_1 CDS 16191299 16191534 16191299 ID=Msa0010680-mRNA-1:cds;Parent=Msa0010680-mRNA-1
chr1_1 CDS 16188996 16190240 16188996 ID=Msa0010680-mRNA-1:cds;Parent=Msa0010680-mRNA-1
Gene Sequence

>Msa0010680

ATGATGAGTAAGCTTGAGGGTTTAAGCAGTCATTCGGTCGCTGTGAGCAATATCAATATGTGGGCTCTTCGTCGAGCTTGGATTCGCCTCACTCGTCTAAGAAACCAAGTGGCTTCTTGTTCTTGTGTGAAATTAATAGTTCCTAACGCTTTGTTGGAATACGCTGATTCTCATCCATTTTACGGGACGGAGAAGTTTACCGTGAGCAGACGTCAACTTTCCTCACAAGCTACTGATGCTGGTAGCAAGAACAAGGAGGAGATTGAAGATCCAGATGTAGTGGATGGAGATAACGACAACGAAGATGAGCTGGAGTTATCGGGTACTGAGACTGTTTCACGTCACAAAAAATTACCAACTACAAACATTCAATCCCAACTATTCAAAGCAATTGTAAGCGTTTCAGATTTGTCCGTTGATTCTACTCTCAACAACTGGGTTGAAAAAGGTAAGGAATTAAGCAGGCAAGAGATCGTGTTGCTCTTGAACAGTCTTCGAAGGCGTAGAATGTATGGAAGGGCTTTACAGGTCTTGGATTGGCTAGAGTCAAACAAAAAGCTTGAATATACTGAGAAAGAATATGCTTCTAAACTTGATTTGATTGCCAAGTTGCGTGGTCTGCCAAAGGCAGAACAATACCTTGAGCATGTTCCAAATTCTTTTAGAGGAGAATTATTATACAGAACACTACTGGCTAACTGTGCTAGTCTGGAAAATTTGAGGAAAACGGAGGAAACATTCAACAAAATGAGGGAGTTAGGTTTTCCTGTTACAGCATTTGCTTGCAACCAGTTGCTTCTCATTTATAAGAGTGTTGACAAGAAAAAAATAGCTGACGTGTTACTTATGATGGGAAAGGAGAATGTCAAACCTTCTCCTTATACTTATAAAATTTTAATAGATGTAAAGAGCATGTCTAATGATATTGATGGAATGTCTCAAATTGTTAAGAGAATGAAGGCAGAAGGTGTTGAACCAGACCATCTAACATGGGCAGTCTTGGCTAGGCATTATGCCTCAGCCGGGCTTATAGAAAAAACTGAAGCTATATTGAAGGAGATTGAAGGTGAAAACTTGAAAGACAATATGTGGGTATGCCCAACTTTGTTTCGCCTTTATGCAATACTGGGTAGGGCTGATGAAGTGGAGAGAATTTGGAAGGCTTGTGAGTCAAAGCCTCGGGTTGAGGACTACCTTGCTGCAATTGAAGCTTGGGGAAGGTTGAAGAAAATTGAAGAAGCAGAGGCAGTTTTTGAGATGATGTCAATTAAATGGAAACTTACCGCCCAAAACTACTCAGTACTCCTGAAAATTTATACAAGGCATAAGATGCTAGACAAGGGTAAGGATCTTATTAAGAAAATGGAAGATAGTGGGTGCATAATAGGTCCAATAACCTGGGATGCTATTGTTTCTCTTTATGTTCGAGCAGGAGAAGTTGAAAAGGCAGACGACGTTTTGCAGAAGGCACTACAACAGCAGAATAAGAAGCCATTGTTCACTACTTATATGACTATTATGGAGCAGTATGCAAAGAGGGGTGACGTCCATAACGCAGAGAAGATTTTCTATAGATTGAGACAAGCTAATCATATTTCTAGAATAAGTTCGTTCTGTGCTCTAGCACAGGCTTATAAAAACGCCAAACTACCGGCATATGGGATCAGGGAGAGGATGAAAGCTGATAACCTATTCCCCAACAAAGCTTTGGCTGGCCAGTTGGCTCTAGTTGATCCTTTTAGGAAAACTCCAGTTTCTGATTTGCTTGATTGA
Protein sequence

>Msa0010680

MMSKLEGLSSHSVAVSNINMWALRRAWIRLTRLRNQVASCSCVKLIVPNALLEYADSHPFYGTEKFTVSRRQLSSQATDAGSKNKEEIEDPDVVDGDNDNEDELELSGTETVSRHKKLPTTNIQSQLFKAIVSVSDLSVDSTLNNWVEKGKELSRQEIVLLLNSLRRRRMYGRALQVLDWLESNKKLEYTEKEYASKLDLIAKLRGLPKAEQYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAFACNQLLLIYKSVDKKKIADVLLMMGKENVKPSPYTYKILIDVKSMSNDIDGMSQIVKRMKAEGVEPDHLTWAVLARHYASAGLIEKTEAILKEIEGENLKDNMWVCPTLFRLYAILGRADEVERIWKACESKPRVEDYLAAIEAWGRLKKIEEAEAVFEMMSIKWKLTAQNYSVLLKIYTRHKMLDKGKDLIKKMEDSGCIIGPITWDAIVSLYVRAGEVEKADDVLQKALQQQNKKPLFTTYMTIMEQYAKRGDVHNAEKIFYRLRQANHISRISSFCALAQAYKNAKLPAYGIRERMKADNLFPNKALAGQLALVDPFRKTPVSDLLD*