AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0620110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620110 MtrunA17_Chr8g0385901 93.217 516 15 3 1 496 1 516 0.0 973
Msa0620110 MtrunA17_Chr3g0131751 66.858 522 144 5 1 495 1 520 0.0 706
Msa0620110 MtrunA17_Chr5g0406751 38.675 468 266 10 48 496 59 524 6.07e-97 308
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620110 AT3G48830.1 61.472 462 167 2 42 492 53 514 0.0 583
Msa0620110 AT5G23690.1 56.844 526 195 8 1 495 1 525 0.0 580
Msa0620110 AT1G28090.3 53.233 464 200 5 44 491 15 477 6.82e-173 495
Msa0620110 AT1G28090.2 52.075 482 213 6 26 491 25 504 2.89e-172 495
Msa0620110 AT1G28090.1 52.075 482 213 6 26 491 61 540 1.32e-171 494
Msa0620110 AT1G28090.4 49.170 482 207 7 26 491 25 484 2.04e-156 454
Msa0620110 AT1G28090.5 57.823 294 122 2 26 319 61 352 9.00e-120 356
Msa0620110 AT2G17580.1 37.876 499 257 11 26 488 44 525 2.18e-104 329

Find 143 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATAATAATGTTAAATT+TGG 0.125002 4_2:-71416605 None:intergenic
GCAAACAAGTGTCGTATTTC+TGG 0.137500 4_2:-71416104 None:intergenic
AGATATTCTTCTTCCCTTTC+AGG 0.165045 4_2:+71412837 Msa0620110:CDS
TTGAGGCTATTATGGAAATT+TGG 0.167814 4_2:+71412808 Msa0620110:CDS
TGAAAATTCAATGGTCATTT+AGG 0.168538 4_2:-71416171 None:intergenic
GCAGTCTTTCTTCTTCAATT+TGG 0.172698 4_2:+71413790 Msa0620110:intron
CCAGAAGCTGTTGTTGATTA+AGG 0.174427 4_2:-71416387 None:intergenic
AACCTTCTTTGAGGCTATTA+TGG 0.195140 4_2:+71412800 Msa0620110:CDS
ATACTTGATGGATAGGGTTT+AGG 0.197461 4_2:-71410172 None:intergenic
TCTCAACATGTTGAAGAAAA+AGG 0.207423 4_2:+71410673 Msa0620110:CDS
TCATAATGGTGGAAATTTAT+TGG 0.213264 4_2:+71415269 Msa0620110:CDS
AAACTTTCATATTGTTCTTA+TGG 0.228804 4_2:+71416561 Msa0620110:three_prime_UTR
AATTCATATTATTGAACTTT+TGG 0.240799 4_2:-71416664 None:intergenic
CTTCAATTTGGATAAACTTT+TGG 0.263089 4_2:+71413802 Msa0620110:CDS
TACTTGATGGATAGGGTTTA+GGG 0.267896 4_2:-71410171 None:intergenic
TCCATATGAACGTGACATAT+TGG 0.268991 4_2:-71411757 None:intergenic
GATTGCTAGTCCAATTAAAA+AGG 0.283917 4_2:+71410649 Msa0620110:CDS
GGCTTTGGAAAATGAGATTC+TGG 0.290925 4_2:+71415377 Msa0620110:CDS
GTTAAAATATCAAAATCTTT+TGG 0.298570 4_2:-71410848 None:intergenic
CATGTAATCATATACAATTT+TGG 0.303365 4_2:-71412212 None:intergenic
CCTTAATCAACAACAGCTTC+TGG 0.314083 4_2:+71416387 Msa0620110:three_prime_UTR
ACGGCTAGTCGAATGAAATT+TGG 0.315213 4_2:+71416266 Msa0620110:three_prime_UTR
CAAAAGAACCAATATGCTTT+TGG 0.320964 4_2:+71412973 Msa0620110:CDS
ATTAGAATTGCTGCTCGCTT+GGG 0.328452 4_2:+71412562 Msa0620110:CDS
CCGCAAGGATCTGATAATTC+AGG 0.335127 4_2:-71415342 None:intergenic
CAGAAGCTGTTGTTGATTAA+GGG 0.335758 4_2:-71416386 None:intergenic
TATTGAACAGGTCCGAACTA+TGG 0.344805 4_2:+71412347 Msa0620110:intron
ATTGAAATGTTGATACTTGA+TGG 0.348738 4_2:-71410184 None:intergenic
TGCAATAAGCATTCAATCAT+AGG 0.351178 4_2:+71416240 Msa0620110:three_prime_UTR
CTGCTATGACACGGACTGTT+AGG 0.368025 4_2:-71413827 None:intergenic
GGGTATAATGTTTACCTTGT+AGG 0.375547 4_2:+71410791 Msa0620110:intron
ACCTTGTAGGAGGTTGTGTC+CGG 0.377122 4_2:+71410804 Msa0620110:CDS
CGGTCTGAATGCAAAGGCTT+TGG 0.377333 4_2:+71415362 Msa0620110:CDS
TTCAGTATTAAGACTTGATA+AGG 0.378042 4_2:+71412633 Msa0620110:CDS
AATGGTTACCAAAAGCATAT+TGG 0.386519 4_2:-71412981 None:intergenic
TGACAGGTGTTCATCCCATT+AGG 0.387976 4_2:+71415966 Msa0620110:intron
CCATATGAACGTGACATATT+GGG 0.392788 4_2:-71411756 None:intergenic
AGGACGAAGATGAAGAAGAT+TGG 0.395083 4_2:-71410239 None:intergenic
CCCAATATGTCACGTTCATA+TGG 0.398478 4_2:+71411756 Msa0620110:CDS
AATTAGAATTGCTGCTCGCT+TGG 0.400588 4_2:+71412561 Msa0620110:CDS
ACAATATGAAAGTTTCATAA+TGG 0.401012 4_2:-71416553 None:intergenic
GAATTCATCTTCTTCCATGC+TGG 0.401932 4_2:-71410599 None:intergenic
GTCCTCCTTGTCACATCCCT+TGG 0.404839 4_2:-71411983 None:intergenic
AGATACCTTGCGGGCACATT+GGG 0.406728 4_2:-71410269 None:intergenic
GAGCTTCTATAACATTCATC+TGG 0.408254 4_2:-71410404 None:intergenic
ATGAATTATATGCTGGCATA+TGG 0.410453 4_2:+71412769 Msa0620110:CDS
TTTAATTGGACTAGCAATCA+TGG 0.421767 4_2:-71410645 None:intergenic
CAAAATTGTATATGATTACA+TGG 0.423212 4_2:+71412213 Msa0620110:CDS
TTTAGCCTTGCTGTTCATAA+TGG 0.429090 4_2:+71415255 Msa0620110:CDS
TCCTCCTTGTCACATCCCTT+GGG 0.437891 4_2:-71411982 None:intergenic
TCAACAGAAGGTACGGATCT+TGG 0.451159 4_2:-71410380 None:intergenic
GGACGAAGATGAAGAAGATT+GGG 0.458027 4_2:-71410238 None:intergenic
GGTGTGAGATAGTTGGTAAA+AGG 0.459123 4_2:+71411731 Msa0620110:CDS
ACAAGCCCCTCATTCAGATA+TGG 0.463925 4_2:+71415479 Msa0620110:CDS
AAGATGAATTCAAAAGAGCT+TGG 0.465391 4_2:+71410611 Msa0620110:CDS
TTGAGCTCAATATTTGAGTC+AGG 0.465631 4_2:-71416362 None:intergenic
CTTAATCAACAACAGCTTCT+GGG 0.467593 4_2:+71416388 Msa0620110:three_prime_UTR
AACACTGCCAAATGCAAGCC+TGG 0.468222 4_2:+71411931 Msa0620110:CDS
GCAATAAGCATTCAATCATA+GGG 0.469550 4_2:+71416241 Msa0620110:three_prime_UTR
ACCACTCAAATGTCAGATGC+TGG 0.478392 4_2:-71416314 None:intergenic
GTGTCTACCAGGCTTGCATT+TGG 0.479365 4_2:-71411938 None:intergenic
TGATCAACCGAGGAATCCTT+TGG 0.482016 4_2:+71415221 Msa0620110:CDS
GCTCGTTACTTTGTTCGTCA+TGG 0.482245 4_2:+71412935 Msa0620110:CDS
AAGATACCTTGCGGGCACAT+TGG 0.494296 4_2:-71410270 None:intergenic
GAATCATCAACTACCTGAAA+GGG 0.498247 4_2:-71412850 None:intergenic
TTCCATAATAGCCTCAAAGA+AGG 0.502067 4_2:-71412802 None:intergenic
ATCAAGTATCAACATTTCAA+TGG 0.504565 4_2:+71410186 Msa0620110:exon
AATGTTGATACTTGATGGAT+AGG 0.505455 4_2:-71410179 None:intergenic
AAATAAGTAAGATACCTTGC+GGG 0.513988 4_2:-71410278 None:intergenic
AGCCTTGCTGTTCATAATGG+TGG 0.515370 4_2:+71415258 Msa0620110:CDS
TGGCAGGTCACCACGAGCTA+AGG 0.516846 4_2:-71416084 None:intergenic
CGGGCACATTGGGATGGGAT+AGG 0.518264 4_2:-71410259 None:intergenic
TATATGCTGGCATATGGATC+TGG 0.520958 4_2:+71412775 Msa0620110:CDS
AAATACGACACTTGTTTGCA+AGG 0.522471 4_2:+71416108 Msa0620110:CDS
CTAGTGTCCTGAAAATTCAA+TGG 0.522859 4_2:-71416180 None:intergenic
TGGAAGCAGTAGACATAGCT+AGG 0.524146 4_2:+71415289 Msa0620110:CDS
TAGCTGCAGGAACCATAGTT+CGG 0.526127 4_2:-71412359 None:intergenic
TGCTCACCATATCTGAATGA+GGG 0.526359 4_2:-71415485 None:intergenic
ACACTTTGCTCATGATATTG+AGG 0.529024 4_2:+71411957 Msa0620110:CDS
TTCGTCATGGATTTCGAAGA+CGG 0.529289 4_2:+71412948 Msa0620110:CDS
ATATCTGAATGAGGGGCTTG+TGG 0.529345 4_2:-71415477 None:intergenic
CCCGGACACAACCTCCTACA+AGG 0.532402 4_2:-71410805 None:intergenic
ACCTTGCGGGCACATTGGGA+TGG 0.537304 4_2:-71410265 None:intergenic
ATGCTCACCATATCTGAATG+AGG 0.538138 4_2:-71415486 None:intergenic
ATCTGGCTCAACAGAAGGTA+CGG 0.538449 4_2:-71410387 None:intergenic
GATCTGGTGAACCTTCTTTG+AGG 0.542008 4_2:+71412791 Msa0620110:CDS
CCTTGTAGGAGGTTGTGTCC+GGG 0.543635 4_2:+71410805 Msa0620110:CDS
TATAATGTTTACCTTGTAGG+AGG 0.544774 4_2:+71410794 Msa0620110:CDS
TTAGAATTGCTGCTCGCTTG+GGG 0.546368 4_2:+71412563 Msa0620110:CDS
CCTTGCGGGCACATTGGGAT+GGG 0.546748 4_2:-71410264 None:intergenic
TTTGGAACAAAGTGCGGTGA+AGG 0.547351 4_2:+71416284 Msa0620110:three_prime_UTR
ATATGATTACATGGGAGGAA+TGG 0.547366 4_2:+71412222 Msa0620110:CDS
CACTGTTGCAGATGACATCT+AGG 0.548811 4_2:+71415424 Msa0620110:intron
TTAAAGATTTATGCAATGCA+AGG 0.550555 4_2:-71415197 None:intergenic
CCCATCCCAATGTGCCCGCA+AGG 0.552957 4_2:+71410264 Msa0620110:CDS
ACAAGGAGGACTATCTTCGC+TGG 0.554427 4_2:+71411995 Msa0620110:CDS
GCCTTTGCATTCAGACCGCA+AGG 0.554939 4_2:-71415357 None:intergenic
TCTTGAAAAGAAGTAGCTGC+AGG 0.561352 4_2:-71412372 None:intergenic
AATACGACACTTGTTTGCAA+GGG 0.564735 4_2:+71416109 Msa0620110:CDS
AGAATCATCAACTACCTGAA+AGG 0.565439 4_2:-71412851 None:intergenic
TCATGATATTGAGGCACCCA+AGG 0.567579 4_2:+71411966 Msa0620110:CDS
CATTCATCTGGCTCAACAGA+AGG 0.571267 4_2:-71410392 None:intergenic
TCGTCATGGATTTCGAAGAC+GGG 0.571981 4_2:+71412949 Msa0620110:CDS
TTTGCTTTAGTATCATGTCC+CGG 0.572529 4_2:-71410823 None:intergenic
AATTGATCAAGTAAATAAGA+AGG 0.572824 4_2:+71410574 Msa0620110:intron
ATATGTCACGTTCATATGGA+TGG 0.573287 4_2:+71411760 Msa0620110:CDS
TCATGAGCAAAGTGTCTACC+AGG 0.574024 4_2:-71411949 None:intergenic
GATGGAAATGAATTATATGC+TGG 0.575826 4_2:+71412762 Msa0620110:CDS
ACAAGTGTCGTATTTCTGGC+AGG 0.577525 4_2:-71416100 None:intergenic
ATGTTGATACTTGATGGATA+GGG 0.577933 4_2:-71410178 None:intergenic
ATTGTATATGATTACATGGG+AGG 0.582051 4_2:+71412217 Msa0620110:CDS
GCAATCACCAAAGGATTCCT+CGG 0.587752 4_2:-71415228 None:intergenic
GCACTCGGTAGCTCGAGCTA+TGG 0.595827 4_2:+71415446 Msa0620110:CDS
TAGGACTGACCAAGGTGTAG+TGG 0.599452 4_2:-71416152 None:intergenic
AGCATTCAATCATAGGGGAA+CGG 0.600577 4_2:+71416247 Msa0620110:three_prime_UTR
AACTTCAGCGGATCTTAGAG+AGG 0.608695 4_2:+71410868 Msa0620110:CDS
ATGAAATTTGGAACAAAGTG+CGG 0.608948 4_2:+71416278 Msa0620110:three_prime_UTR
ATCAACAACAGCTTCTGGGT+GGG 0.613853 4_2:+71416392 Msa0620110:three_prime_UTR
TATGGATGGTATCATCGTTG+AGG 0.614806 4_2:+71411774 Msa0620110:CDS
TAAATAAGAAGGCTCCAGCA+TGG 0.616886 4_2:+71410585 Msa0620110:CDS
GGCACCCAAGGGATGTGACA+AGG 0.623953 4_2:+71411978 Msa0620110:CDS
TCCAGCATCTGACATTTGAG+TGG 0.626718 4_2:+71416313 Msa0620110:three_prime_UTR
TCAGGAAATCTGATGTCGTG+TGG 0.632031 4_2:-71415324 None:intergenic
CATGATATTGAGGCACCCAA+GGG 0.636305 4_2:+71411967 Msa0620110:CDS
ACTGTATATCCACTACACCT+TGG 0.637952 4_2:+71416143 Msa0620110:CDS
TTCCACCATTATGAACAGCA+AGG 0.638662 4_2:-71415260 None:intergenic
ACTTGATGGATAGGGTTTAG+GGG 0.640097 4_2:-71410170 None:intergenic
CCTGAATTATCAGATCCTTG+CGG 0.647308 4_2:+71415342 Msa0620110:CDS
AATCAACAACAGCTTCTGGG+TGG 0.648014 4_2:+71416391 Msa0620110:three_prime_UTR
AGGAGGACTATCTTCGCTGG+AGG 0.648114 4_2:+71411998 Msa0620110:CDS
GCAGATGACATCTAGGCACT+CGG 0.649797 4_2:+71415431 Msa0620110:intron
GTATGTACAACAGATTCAGA+TGG 0.650430 4_2:+71416625 Msa0620110:three_prime_UTR
CTAAATGCAGCAATCACCAA+AGG 0.654027 4_2:-71415237 None:intergenic
GATTACGAATCCTTAGCTCG+TGG 0.656360 4_2:+71416074 Msa0620110:CDS
AAAATTGTATATGATTACAT+GGG 0.668677 4_2:+71412214 Msa0620110:CDS
TCCTTGCGGTCTGAATGCAA+AGG 0.671283 4_2:+71415356 Msa0620110:CDS
GCTCACCATATCTGAATGAG+GGG 0.672792 4_2:-71415484 None:intergenic
TGGTCATTTAGGACTGACCA+AGG 0.689070 4_2:-71416160 None:intergenic
CAATAAGCATTCAATCATAG+GGG 0.690328 4_2:+71416242 Msa0620110:three_prime_UTR
AATCTTTAAGTGATCAACCG+AGG 0.693194 4_2:+71415211 Msa0620110:CDS
AAGATGTTTAACAGAACGAG+CGG 0.695663 4_2:-71412605 None:intergenic
AAGCAGTAGACATAGCTAGG+AGG 0.708350 4_2:+71415292 Msa0620110:CDS
ACCCAAGGGATGTGACAAGG+AGG 0.730284 4_2:+71411981 Msa0620110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATATTTATCTATATGT+TGG + chr4_2:71410543-71410562 Msa0620110:intron 10.0%
!!! ATTTAAAATAAGATAGAAAT+AGG - chr4_2:71410906-71410925 None:intergenic 10.0%
!!! TTTTAAATTATTTGTTTAGA+CGG + chr4_2:71410918-71410937 Msa0620110:intron 10.0%
!! ATATCTTTAAATAATATGTT+GGG - chr4_2:71411343-71411362 None:intergenic 10.0%
!! TATATCTTTAAATAATATGT+TGG - chr4_2:71411344-71411363 None:intergenic 10.0%
!! TATTTGAGTATTATTTATAA+GGG - chr4_2:71415599-71415618 None:intergenic 10.0%
!! ATATTTGAGTATTATTTATA+AGG - chr4_2:71415600-71415619 None:intergenic 10.0%
!! TACAACTAAAAAAAAAAAAT+TGG - chr4_2:71416521-71416540 None:intergenic 10.0%
!! TACAATAATAATGTTAAATT+TGG - chr4_2:71416608-71416627 None:intergenic 10.0%
!! TTCGTGTTAATATTTATTAA+AGG + chr4_2:71410483-71410502 Msa0620110:intron 15.0%
!!! GTTAAAATATCAAAATCTTT+TGG - chr4_2:71410851-71410870 None:intergenic 15.0%
!! GATTATTATTATCAGTATTA+TGG + chr4_2:71411175-71411194 Msa0620110:intron 15.0%
!!! AATAGAGATTTTACAATTAA+TGG + chr4_2:71412030-71412049 Msa0620110:CDS 15.0%
!!! ATAGAGATTTTACAATTAAT+GGG + chr4_2:71412031-71412050 Msa0620110:CDS 15.0%
!! AAAATTGTATATGATTACAT+GGG + chr4_2:71412214-71412233 Msa0620110:CDS 15.0%
!!! TAAGAAAATTGTTTTTTGTA+TGG - chr4_2:71413063-71413082 None:intergenic 15.0%
!!! TATTTTTACGAAATGAATTA+CGG - chr4_2:71413216-71413235 None:intergenic 15.0%
!!! ATTATTTTTCCTAATATGTA+TGG + chr4_2:71413660-71413679 Msa0620110:intron 15.0%
!! CTACTAAAGTTAATTATATT+AGG - chr4_2:71413892-71413911 None:intergenic 15.0%
!!! ATATAACTGATTTCAATATA+AGG - chr4_2:71414493-71414512 None:intergenic 15.0%
!! ATTGAAATCAGTTATATTAA+TGG + chr4_2:71414496-71414515 Msa0620110:intron 15.0%
!!! ATTTTGAATTCATTGTTTAA+TGG + chr4_2:71415782-71415801 Msa0620110:intron 15.0%
!!! TGATTGTTATTTATGAATTT+GGG + chr4_2:71415862-71415881 Msa0620110:intron 15.0%
!! AACTTGAAAAATAAAATAGT+TGG + chr4_2:71416429-71416448 Msa0620110:three_prime_UTR 15.0%
!! AATTGGAACAAAAAATAAAT+AGG - chr4_2:71416504-71416523 None:intergenic 15.0%
!!! AATTCATATTATTGAACTTT+TGG - chr4_2:71416667-71416686 None:intergenic 15.0%
!! AATTGATCAAGTAAATAAGA+AGG + chr4_2:71410574-71410593 Msa0620110:intron 20.0%
!!! TTTTGATATTTTAACTTCAG+CGG + chr4_2:71410856-71410875 Msa0620110:CDS 20.0%
!!! GGTATCAAGTATTTTTATAT+TGG + chr4_2:71411003-71411022 Msa0620110:intron 20.0%
!! ATATGCCTTTATATATGTAT+AGG + chr4_2:71411054-71411073 Msa0620110:intron 20.0%
!! TATGCCTTTATATATGTATA+GGG + chr4_2:71411055-71411074 Msa0620110:intron 20.0%
!! TTATTATCAGTATTATGGAA+TGG + chr4_2:71411180-71411199 Msa0620110:intron 20.0%
!! TATTATCAGTATTATGGAAT+GGG + chr4_2:71411181-71411200 Msa0620110:intron 20.0%
!!! ATTTTTTGTTTCTAATCCAA+TGG - chr4_2:71411281-71411300 None:intergenic 20.0%
!! TTAAAGGGAAAAATTAAAAG+AGG - chr4_2:71411438-71411457 None:intergenic 20.0%
!! AAGCTAAAATTTAGACTTTA+AGG + chr4_2:71411556-71411575 Msa0620110:intron 20.0%
!! AGCTAAAATTTAGACTTTAA+GGG + chr4_2:71411557-71411576 Msa0620110:intron 20.0%
!!! CATGTAATCATATACAATTT+TGG - chr4_2:71412215-71412234 None:intergenic 20.0%
!! CAAAATTGTATATGATTACA+TGG + chr4_2:71412213-71412232 Msa0620110:CDS 20.0%
!!! TAATTTCTAAAGCTTTATCA+TGG + chr4_2:71412880-71412899 Msa0620110:intron 20.0%
!!! ATTTTTACGAAATGAATTAC+GGG - chr4_2:71413215-71413234 None:intergenic 20.0%
!!! TTCTTATTCGAGTATTTTTA+GGG + chr4_2:71413545-71413564 Msa0620110:intron 20.0%
!!! CACATTGTTTATTTTACTTT+TGG + chr4_2:71413757-71413776 Msa0620110:intron 20.0%
!! TAATTATATTAGGAAGAAAC+AGG - chr4_2:71413882-71413901 None:intergenic 20.0%
!! TTCCAACATATATTAATACA+GGG - chr4_2:71414693-71414712 None:intergenic 20.0%
!! TTTCCAACATATATTAATAC+AGG - chr4_2:71414694-71414713 None:intergenic 20.0%
!! ACAATTTAGATAAGGAAATT+CGG - chr4_2:71414923-71414942 None:intergenic 20.0%
!! ATTTCCTTATCTAAATTGTT+TGG + chr4_2:71414924-71414943 Msa0620110:intron 20.0%
!! ATTATCATACATCAAATATC+TGG - chr4_2:71415841-71415860 None:intergenic 20.0%
!!! CTGATTGTTATTTATGAATT+TGG + chr4_2:71415861-71415880 Msa0620110:intron 20.0%
!!! TTATTTTTCAAGTTATAGCA+TGG - chr4_2:71416423-71416442 None:intergenic 20.0%
!!! ATAAATAGGTGAATTTTGTT+GGG - chr4_2:71416490-71416509 None:intergenic 20.0%
!!! AATAAATAGGTGAATTTTGT+TGG - chr4_2:71416491-71416510 None:intergenic 20.0%
!! ACAATATGAAAGTTTCATAA+TGG - chr4_2:71416556-71416575 None:intergenic 20.0%
!! AAACTTTCATATTGTTCTTA+TGG + chr4_2:71416561-71416580 Msa0620110:three_prime_UTR 20.0%
! ATTGAAATGTTGATACTTGA+TGG - chr4_2:71410187-71410206 None:intergenic 25.0%
! ATCAAGTATCAACATTTCAA+TGG + chr4_2:71410186-71410205 Msa0620110:exon 25.0%
!! ATGTTGAGAACCTTTTTAAT+TGG - chr4_2:71410662-71410681 None:intergenic 25.0%
! ACAACAACAACAACAAAAAA+AGG - chr4_2:71410761-71410780 None:intergenic 25.0%
! AAGATAGAAATAGGAAATGA+AGG - chr4_2:71410897-71410916 None:intergenic 25.0%
!!! AGTATTTTTATATTGGCATC+TGG + chr4_2:71411010-71411029 Msa0620110:intron 25.0%
! ATAATCATAATCTAGACTGT+TGG - chr4_2:71411161-71411180 None:intergenic 25.0%
!! TTAAGAATTTTGTGACACAA+TGG - chr4_2:71411239-71411258 None:intergenic 25.0%
! AATAATGCAGCATCATTAAA+GGG - chr4_2:71411453-71411472 None:intergenic 25.0%
! AAATAATGCAGCATCATTAA+AGG - chr4_2:71411454-71411473 None:intergenic 25.0%
!!! TAAATTTTAGCTTCTGTGAA+TGG - chr4_2:71411549-71411568 None:intergenic 25.0%
! TTTAAGGGAAATTGAGTTAT+AGG + chr4_2:71411572-71411591 Msa0620110:intron 25.0%
!! TGAATCTTGACTCAATTTTT+AGG + chr4_2:71411690-71411709 Msa0620110:intron 25.0%
! AAAAACAGATTGAGAAACAT+AGG - chr4_2:71411810-71411829 None:intergenic 25.0%
! TTATCATGAAAAGAAGAGTA+GGG - chr4_2:71411877-71411896 None:intergenic 25.0%
! GTTAAAACTTGAAACCTAAT+AGG - chr4_2:71411914-71411933 None:intergenic 25.0%
!!! GCTTTTAAAATTGAAAGAAC+AGG - chr4_2:71412064-71412083 None:intergenic 25.0%
! ATTTGCAGCAAAAAAGAAAA+GGG - chr4_2:71412101-71412120 None:intergenic 25.0%
!!! TCATATACAATTTTGGCAAA+TGG - chr4_2:71412208-71412227 None:intergenic 25.0%
!! CTATCGTAATTTTATTGAAC+AGG + chr4_2:71412335-71412354 Msa0620110:intron 25.0%
! TTCAGTATTAAGACTTGATA+AGG + chr4_2:71412633-71412652 Msa0620110:CDS 25.0%
!!! TTTAACTGTTTTAGCCTTTT+AGG + chr4_2:71412729-71412748 Msa0620110:intron 25.0%
!!! TTAACTGTTTTAGCCTTTTA+GGG + chr4_2:71412730-71412749 Msa0620110:intron 25.0%
! TATTTGCAAGGATTATGTAA+AGG - chr4_2:71413418-71413437 None:intergenic 25.0%
! AACTCAATATCATGCATATT+CGG - chr4_2:71413451-71413470 None:intergenic 25.0%
! GACTACTTATCATCATAATT+AGG + chr4_2:71413519-71413538 Msa0620110:intron 25.0%
! TACTTATCATCATAATTAGG+TGG + chr4_2:71413522-71413541 Msa0620110:intron 25.0%
!! GTTCTTATTCGAGTATTTTT+AGG + chr4_2:71413544-71413563 Msa0620110:intron 25.0%
!!! TCTTCTGTCTCTTTTTTAAT+AGG - chr4_2:71413597-71413616 None:intergenic 25.0%
!! TTTTCCTAATATGTATGGTT+TGG + chr4_2:71413665-71413684 Msa0620110:intron 25.0%
!! ACAAACTTTTTACATCACAT+GGG + chr4_2:71413734-71413753 Msa0620110:intron 25.0%
!! CTTCAATTTGGATAAACTTT+TGG + chr4_2:71413802-71413821 Msa0620110:CDS 25.0%
!! AACAAGAAGTTGTTGATTAA+GGG - chr4_2:71413944-71413963 None:intergenic 25.0%
!! AAACAAGAAGTTGTTGATTA+AGG - chr4_2:71413945-71413964 None:intergenic 25.0%
! TTTAACAAAGCAATAACAAC+AGG - chr4_2:71413996-71414015 None:intergenic 25.0%
! AGATATTAAAGAATGTTCCA+TGG - chr4_2:71414038-71414057 None:intergenic 25.0%
! ATTTCAATATAAGGCTTTCA+AGG - chr4_2:71414484-71414503 None:intergenic 25.0%
! AATTTAGATAAGGAAATTCG+GGG - chr4_2:71414921-71414940 None:intergenic 25.0%
! CAATTTAGATAAGGAAATTC+GGG - chr4_2:71414922-71414941 None:intergenic 25.0%
!! ATTTTATATCACATTCCACA+TGG - chr4_2:71414977-71414996 None:intergenic 25.0%
! TTAAAGATTTATGCAATGCA+AGG - chr4_2:71415200-71415219 None:intergenic 25.0%
!! TCATAATGGTGGAAATTTAT+TGG + chr4_2:71415269-71415288 Msa0620110:CDS 25.0%
! TGATATTATTATCCAACAAG+TGG + chr4_2:71415535-71415554 Msa0620110:intron 25.0%
! TGAGTATTATTTATAAGGGA+TGG - chr4_2:71415595-71415614 None:intergenic 25.0%
!!! GAGTAATTTTTTTATCCTAG+TGG + chr4_2:71415691-71415710 Msa0620110:intron 25.0%
! TATCAGTTCAAAAGTTGAAT+TGG + chr4_2:71415723-71415742 Msa0620110:intron 25.0%
! GATTAATAATACAAACGACA+TGG - chr4_2:71415936-71415955 None:intergenic 25.0%
! TTAATCTTTGACAATTTGAC+AGG + chr4_2:71415950-71415969 Msa0620110:intron 25.0%
!!! ATCAATTTTTCTGCTTTTCT+TGG - chr4_2:71416057-71416076 None:intergenic 25.0%
! TGAAAATTCAATGGTCATTT+AGG - chr4_2:71416174-71416193 None:intergenic 25.0%
!! TAAATGACCATTGAATTTTC+AGG + chr4_2:71416173-71416192 Msa0620110:exon 25.0%
! GCAGAAAAAAATCATTAAAG+AGG + chr4_2:71416451-71416470 Msa0620110:three_prime_UTR 25.0%
!! TAAATAGGTGAATTTTGTTG+GGG - chr4_2:71416489-71416508 None:intergenic 25.0%
! ATGTTGATACTTGATGGATA+GGG - chr4_2:71410181-71410200 None:intergenic 30.0%
! AATGTTGATACTTGATGGAT+AGG - chr4_2:71410182-71410201 None:intergenic 30.0%
AAATAAGTAAGATACCTTGC+GGG - chr4_2:71410281-71410300 None:intergenic 30.0%
GAAATAAGTAAGATACCTTG+CGG - chr4_2:71410282-71410301 None:intergenic 30.0%
!!! TGTAATTTTTTTCCGCTTCT+AGG + chr4_2:71410352-71410371 Msa0620110:intron 30.0%
! AGAAGCTCAAATCTAAAACA+AGG + chr4_2:71410419-71410438 Msa0620110:intron 30.0%
AAGATGAATTCAAAAGAGCT+TGG + chr4_2:71410611-71410630 Msa0620110:CDS 30.0%
!! TTTAATTGGACTAGCAATCA+TGG - chr4_2:71410648-71410667 None:intergenic 30.0%
GATTGCTAGTCCAATTAAAA+AGG + chr4_2:71410649-71410668 Msa0620110:CDS 30.0%
TCTCAACATGTTGAAGAAAA+AGG + chr4_2:71410673-71410692 Msa0620110:CDS 30.0%
CTCAACATGTTGAAGAAAAA+GGG + chr4_2:71410674-71410693 Msa0620110:CDS 30.0%
ACTTAAATTCCAAGCTTTCT+AGG + chr4_2:71410728-71410747 Msa0620110:intron 30.0%
TATAATGTTTACCTTGTAGG+AGG + chr4_2:71410794-71410813 Msa0620110:CDS 30.0%
GTTCTAACTGCTTATAACTT+TGG - chr4_2:71410976-71410995 None:intergenic 30.0%
ATAAGCAGTTAGAACTTAGA+AGG + chr4_2:71410981-71411000 Msa0620110:intron 30.0%
TAAGCAGTTAGAACTTAGAA+GGG + chr4_2:71410982-71411001 Msa0620110:intron 30.0%
CACTCCCTATACATATATAA+AGG - chr4_2:71411062-71411081 None:intergenic 30.0%
! AGATTCCGTTTCTTTTTCTA+CGG + chr4_2:71411402-71411421 Msa0620110:intron 30.0%
AAAGACCGTAGAAAAAGAAA+CGG - chr4_2:71411410-71411429 None:intergenic 30.0%
TGAATGGAAAATACAAGGTT+GGG - chr4_2:71411533-71411552 None:intergenic 30.0%
TTCTGTGAATGGAAAATACA+AGG - chr4_2:71411538-71411557 None:intergenic 30.0%
AAGATTCACTTAGCAAAGTT+AGG - chr4_2:71411678-71411697 None:intergenic 30.0%
! TCTGGTTAGTTATCTTTACT+GGG + chr4_2:71411833-71411852 Msa0620110:intron 30.0%
TATCATGAAAAGAAGAGTAG+GGG - chr4_2:71411876-71411895 None:intergenic 30.0%
GTTATCATGAAAAGAAGAGT+AGG - chr4_2:71411878-71411897 None:intergenic 30.0%
AACTTGAAACCTAATAGGAA+GGG - chr4_2:71411909-71411928 None:intergenic 30.0%
AAACTTGAAACCTAATAGGA+AGG - chr4_2:71411910-71411929 None:intergenic 30.0%
TTTGCAGCAAAAAAGAAAAG+GGG - chr4_2:71412100-71412119 None:intergenic 30.0%
CATTTGCAGCAAAAAAGAAA+AGG - chr4_2:71412102-71412121 None:intergenic 30.0%
AACCAAATTTACACTCTTTC+AGG + chr4_2:71412170-71412189 Msa0620110:intron 30.0%
! AACCTGAAAGAGTGTAAATT+TGG - chr4_2:71412175-71412194 None:intergenic 30.0%
ATTGTATATGATTACATGGG+AGG + chr4_2:71412217-71412236 Msa0620110:CDS 30.0%
ATGAGAAATGGTGACAAAAT+AGG - chr4_2:71412438-71412457 None:intergenic 30.0%
! TGTCACCATTTCTCATATTT+TGG + chr4_2:71412442-71412461 Msa0620110:intron 30.0%
! GTCACCATTTCTCATATTTT+GGG + chr4_2:71412443-71412462 Msa0620110:intron 30.0%
AAAGGCTAAAACAGTTAAAG+AGG - chr4_2:71412728-71412747 None:intergenic 30.0%
GATGGAAATGAATTATATGC+TGG + chr4_2:71412762-71412781 Msa0620110:CDS 30.0%
ATGAATTATATGCTGGCATA+TGG + chr4_2:71412769-71412788 Msa0620110:CDS 30.0%
TTGAGGCTATTATGGAAATT+TGG + chr4_2:71412808-71412827 Msa0620110:CDS 30.0%
! CAAAAGAACCAATATGCTTT+TGG + chr4_2:71412973-71412992 Msa0620110:CDS 30.0%
! AATGGTTACCAAAAGCATAT+TGG - chr4_2:71412984-71413003 None:intergenic 30.0%
ATCAACTTCATAAAGAGGAA+TGG - chr4_2:71413002-71413021 None:intergenic 30.0%
TCAGTATCAACTTCATAAAG+AGG - chr4_2:71413007-71413026 None:intergenic 30.0%
TAAACTAACTCAGAAGTTGT+TGG + chr4_2:71413081-71413100 Msa0620110:intron 30.0%
AGCCTAAAAGACTAAAGATT+AGG + chr4_2:71413344-71413363 Msa0620110:intron 30.0%
GCCTAAAAGACTAAAGATTA+GGG + chr4_2:71413345-71413364 Msa0620110:intron 30.0%
!! TCCCTAATCTTTAGTCTTTT+AGG - chr4_2:71413349-71413368 None:intergenic 30.0%
AAAAGACTAAAGATTAGGGA+TGG + chr4_2:71413349-71413368 Msa0620110:intron 30.0%
GGGTTTAATACTTATTTGCA+AGG - chr4_2:71413430-71413449 None:intergenic 30.0%
ACTCAATATCATGCATATTC+GGG - chr4_2:71413450-71413469 None:intergenic 30.0%
TCTACCAAACCATACATATT+AGG - chr4_2:71413672-71413691 None:intergenic 30.0%
! CACAAACTTTTTACATCACA+TGG + chr4_2:71413733-71413752 Msa0620110:intron 30.0%
TTATGCAGAGGAAAGTAAAA+AGG - chr4_2:71414187-71414206 None:intergenic 30.0%
TAGAAACAATTATACCCTGA+TGG - chr4_2:71414225-71414244 None:intergenic 30.0%
AGAAACAACTTTAACCTCAT+GGG - chr4_2:71414293-71414312 None:intergenic 30.0%
!! AAGCGTTATTTCTTAGACTT+AGG - chr4_2:71414348-71414367 None:intergenic 30.0%
! CATTGATTACACAACTTTCA+AGG + chr4_2:71414610-71414629 Msa0620110:intron 30.0%
GACCCTGTATTAATATATGT+TGG + chr4_2:71414688-71414707 Msa0620110:intron 30.0%
GTGACCAAACAATTTAGATA+AGG - chr4_2:71414931-71414950 None:intergenic 30.0%
ATCTAAATTGTTTGGTCACT+AGG + chr4_2:71414932-71414951 Msa0620110:intron 30.0%
ATAAGGAATCAATGCTTTCA+GGG + chr4_2:71415167-71415186 Msa0620110:intron 30.0%
! TTCAACTTTTGAACTGATAC+CGG - chr4_2:71415722-71415741 None:intergenic 30.0%
GAATTGGAATTGTAGTTATC+TGG + chr4_2:71415739-71415758 Msa0620110:intron 30.0%
!! TGTTTAATGGTTGATGATGA+TGG + chr4_2:71415795-71415814 Msa0620110:intron 30.0%
GTCTATCTTTGTTGATATGT+TGG + chr4_2:71415884-71415903 Msa0620110:intron 30.0%
TAATAATACAAACGACATGG+TGG - chr4_2:71415933-71415952 None:intergenic 30.0%
!! CTTTTAGGTACATTCCTAAT+GGG - chr4_2:71415983-71416002 None:intergenic 30.0%
! CAAAAATGCTTAGAGCTTTT+AGG - chr4_2:71415998-71416017 None:intergenic 30.0%
TGCAATAAGCATTCAATCAT+AGG + chr4_2:71416240-71416259 Msa0620110:three_prime_UTR 30.0%
GCAATAAGCATTCAATCATA+GGG + chr4_2:71416241-71416260 Msa0620110:three_prime_UTR 30.0%
CAATAAGCATTCAATCATAG+GGG + chr4_2:71416242-71416261 Msa0620110:three_prime_UTR 30.0%
! ATGAAATTTGGAACAAAGTG+CGG + chr4_2:71416278-71416297 Msa0620110:three_prime_UTR 30.0%
! ATACTTGATGGATAGGGTTT+AGG - chr4_2:71410175-71410194 None:intergenic 35.0%
! GGGTTTGCAGACTAATTTTA+AGG - chr4_2:71410221-71410240 None:intergenic 35.0%
GAGCTTCTATAACATTCATC+TGG - chr4_2:71410407-71410426 None:intergenic 35.0%
AAATTCCAAGCTTTCTAGGT+CGG + chr4_2:71410732-71410751 Msa0620110:intron 35.0%
GGGTATAATGTTTACCTTGT+AGG + chr4_2:71410791-71410810 Msa0620110:intron 35.0%
TTTGCTTTAGTATCATGTCC+CGG - chr4_2:71410826-71410845 None:intergenic 35.0%
!! TAACTTTGGCTCTTGATCTA+CGG - chr4_2:71410962-71410981 None:intergenic 35.0%
AATGGTAGGTAACAATGAAG+GGG - chr4_2:71411221-71411240 None:intergenic 35.0%
CAATGGTAGGTAACAATGAA+GGG - chr4_2:71411222-71411241 None:intergenic 35.0%
ACAATGGTAGGTAACAATGA+AGG - chr4_2:71411223-71411242 None:intergenic 35.0%
! GAATTTTGTGACACAATGGT+AGG - chr4_2:71411235-71411254 None:intergenic 35.0%
TCCTTTGCAAACTAAACCAT+TGG + chr4_2:71411262-71411281 Msa0620110:intron 35.0%
!! TCCAATGGTTTAGTTTGCAA+AGG - chr4_2:71411266-71411285 None:intergenic 35.0%
CTCATTTAACTGGGTCAAAA+TGG - chr4_2:71411498-71411517 None:intergenic 35.0%
!! GGTTTGTTGCTCATTTAACT+GGG - chr4_2:71411507-71411526 None:intergenic 35.0%
!! AGGTTTGTTGCTCATTTAAC+TGG - chr4_2:71411508-71411527 None:intergenic 35.0%
GTGAATGGAAAATACAAGGT+TGG - chr4_2:71411534-71411553 None:intergenic 35.0%
! AGGTGATGAGAACATTTTCA+TGG + chr4_2:71411710-71411729 Msa0620110:intron 35.0%
! TTTTCATGGTGTGAGATAGT+TGG + chr4_2:71411724-71411743 Msa0620110:CDS 35.0%
CCATATGAACGTGACATATT+GGG - chr4_2:71411759-71411778 None:intergenic 35.0%
TCCATATGAACGTGACATAT+TGG - chr4_2:71411760-71411779 None:intergenic 35.0%
ATATGTCACGTTCATATGGA+TGG + chr4_2:71411760-71411779 Msa0620110:CDS 35.0%
!!! TCTCAATCTGTTTTTACCTC+TGG + chr4_2:71411815-71411834 Msa0620110:intron 35.0%
CAGTAAAGATAACTAACCAG+AGG - chr4_2:71411834-71411853 None:intergenic 35.0%
! CTCTGGTTAGTTATCTTTAC+TGG + chr4_2:71411832-71411851 Msa0620110:intron 35.0%
! CTGGTTAGTTATCTTTACTG+GGG + chr4_2:71411834-71411853 Msa0620110:intron 35.0%
CTTTATTCTCCCTTCCTATT+AGG + chr4_2:71411897-71411916 Msa0620110:intron 35.0%
ACACTTTGCTCATGATATTG+AGG + chr4_2:71411957-71411976 Msa0620110:CDS 35.0%
TTGCAGCAAAAAAGAAAAGG+GGG - chr4_2:71412099-71412118 None:intergenic 35.0%
ATATGATTACATGGGAGGAA+TGG + chr4_2:71412222-71412241 Msa0620110:CDS 35.0%
!! ACTTCTTTTCAAGAGGATTG+TGG + chr4_2:71412381-71412400 Msa0620110:CDS 35.0%
ACTGCCCAAAATATGAGAAA+TGG - chr4_2:71412450-71412469 None:intergenic 35.0%
CATTCACTATTCAGAAGAGT+AGG - chr4_2:71412492-71412511 None:intergenic 35.0%
CTTCTGAATAGTGAATGCAT+AGG + chr4_2:71412495-71412514 Msa0620110:intron 35.0%
AAGATGTTTAACAGAACGAG+CGG - chr4_2:71412608-71412627 None:intergenic 35.0%
ACATTGACGAGGATATTATG+TGG + chr4_2:71412694-71412713 Msa0620110:intron 35.0%
!! AACCTTCTTTGAGGCTATTA+TGG + chr4_2:71412800-71412819 Msa0620110:CDS 35.0%
TTCCATAATAGCCTCAAAGA+AGG - chr4_2:71412805-71412824 None:intergenic 35.0%
AGATATTCTTCTTCCCTTTC+AGG + chr4_2:71412837-71412856 Msa0620110:CDS 35.0%
GAATCATCAACTACCTGAAA+GGG - chr4_2:71412853-71412872 None:intergenic 35.0%
AGAATCATCAACTACCTGAA+AGG - chr4_2:71412854-71412873 None:intergenic 35.0%
!! CAGTTTGCTTTTGACATTAC+AGG + chr4_2:71412913-71412932 Msa0620110:intron 35.0%
AGTTCTTGCAAGGTTATACA+AGG + chr4_2:71413259-71413278 Msa0620110:intron 35.0%
ATGCATGATATTGAGTTCCT+TGG + chr4_2:71413454-71413473 Msa0620110:intron 35.0%
TACGATATATCCTCAGGTAT+TGG - chr4_2:71413482-71413501 None:intergenic 35.0%
!!! ATTCGAGTATTTTTAGGGTC+TGG + chr4_2:71413550-71413569 Msa0620110:intron 35.0%
! TTCAAGTTACGAACAGCAAA+TGG + chr4_2:71413619-71413638 Msa0620110:intron 35.0%
GCAGTCTTTCTTCTTCAATT+TGG + chr4_2:71413790-71413809 Msa0620110:intron 35.0%
GAGTTCGATAAATATGAGTC+AGG - chr4_2:71413918-71413937 None:intergenic 35.0%
TGTTAAATTTCCAGTGCCTA+TGG + chr4_2:71414009-71414028 Msa0620110:intron 35.0%
!!! TACTTTTTCGCATGCATCAA+TGG + chr4_2:71414077-71414096 Msa0620110:intron 35.0%
!!! ACTTTTTCGCATGCATCAAT+GGG + chr4_2:71414078-71414097 Msa0620110:intron 35.0%
GTTTGTGGGTAATATGAACA+GGG + chr4_2:71414117-71414136 Msa0620110:intron 35.0%
TTTGTGGGTAATATGAACAG+GGG + chr4_2:71414118-71414137 Msa0620110:intron 35.0%
TTCGTGTAAGATCTCATTTC+AGG - chr4_2:71414152-71414171 None:intergenic 35.0%
! AGAGGAAAGTAAAAAGGCAT+GGG - chr4_2:71414181-71414200 None:intergenic 35.0%
AAAAAAATAGCTACCCCACA+AGG - chr4_2:71414270-71414289 None:intergenic 35.0%
!!! GTAGCTATTTTTTTCCCATG+AGG + chr4_2:71414276-71414295 Msa0620110:intron 35.0%
GAGAAACAACTTTAACCTCA+TGG - chr4_2:71414294-71414313 None:intergenic 35.0%
! GACTCTTGAGTAGAGTTTTT+AGG + chr4_2:71414843-71414862 Msa0620110:intron 35.0%
!!! TGGTTTTGTAAGGATGAGTT+AGG + chr4_2:71414885-71414904 Msa0620110:intron 35.0%
AAGGAAATTCGGGGAAATTT+GGG - chr4_2:71414912-71414931 None:intergenic 35.0%
TAAGGAAATTCGGGGAAATT+TGG - chr4_2:71414913-71414932 None:intergenic 35.0%
ATGAACTATTAGTGTCCATG+TGG + chr4_2:71414959-71414978 Msa0620110:intron 35.0%
TTTACGAGCTGATTACATGT+TGG + chr4_2:71415021-71415040 Msa0620110:intron 35.0%
TTACGAGCTGATTACATGTT+GGG + chr4_2:71415022-71415041 Msa0620110:intron 35.0%
TTTACGAGCTGATTACATGT+TGG + chr4_2:71415021-71415040 Msa0620110:intron 35.0%
TTACGAGCTGATTACATGTT+GGG + chr4_2:71415022-71415041 Msa0620110:intron 35.0%
TTTACGAGCTGATTACATGT+TGG + chr4_2:71415021-71415040 Msa0620110:intron 35.0%
TTACGAGCTGATTACATGTT+GGG + chr4_2:71415022-71415041 Msa0620110:intron 35.0%
CATAAGGAATCAATGCTTTC+AGG + chr4_2:71415166-71415185 Msa0620110:intron 35.0%
AATCTTTAAGTGATCAACCG+AGG + chr4_2:71415211-71415230 Msa0620110:CDS 35.0%
!! TTTAGCCTTGCTGTTCATAA+TGG + chr4_2:71415255-71415274 Msa0620110:CDS 35.0%
TTATTATCCAACAAGTGGAC+TGG + chr4_2:71415540-71415559 Msa0620110:intron 35.0%
ATAAGGGATGGTGAATGATT+AGG - chr4_2:71415583-71415602 None:intergenic 35.0%
! TTTTATCCTAGTGGCATTAC+CGG + chr4_2:71415700-71415719 Msa0620110:intron 35.0%
!! GCTTTTAGGTACATTCCTAA+TGG - chr4_2:71415984-71416003 None:intergenic 35.0%
AAATACGACACTTGTTTGCA+AGG + chr4_2:71416108-71416127 Msa0620110:CDS 35.0%
AATACGACACTTGTTTGCAA+GGG + chr4_2:71416109-71416128 Msa0620110:CDS 35.0%
CTAGTGTCCTGAAAATTCAA+TGG - chr4_2:71416183-71416202 None:intergenic 35.0%
TTGAGCTCAATATTTGAGTC+AGG - chr4_2:71416365-71416384 None:intergenic 35.0%
! CAGAAGCTGTTGTTGATTAA+GGG - chr4_2:71416389-71416408 None:intergenic 35.0%
CTTAATCAACAACAGCTTCT+GGG + chr4_2:71416388-71416407 Msa0620110:three_prime_UTR 35.0%
GTATGTACAACAGATTCAGA+TGG + chr4_2:71416625-71416644 Msa0620110:three_prime_UTR 35.0%
GGACGAAGATGAAGAAGATT+GGG - chr4_2:71410241-71410260 None:intergenic 40.0%
AGGACGAAGATGAAGAAGAT+TGG - chr4_2:71410242-71410261 None:intergenic 40.0%
ATCTTGGTACAACCTAGAAG+CGG - chr4_2:71410367-71410386 None:intergenic 40.0%
TAAATAAGAAGGCTCCAGCA+TGG + chr4_2:71410585-71410604 Msa0620110:CDS 40.0%
GAATTCATCTTCTTCCATGC+TGG - chr4_2:71410602-71410621 None:intergenic 40.0%
! TTGTTGTTGTTGCTGCTGTA+GGG + chr4_2:71410771-71410790 Msa0620110:intron 40.0%
CAATGACCAAGTGTTCTCAT+CGG - chr4_2:71411088-71411107 None:intergenic 40.0%
GGAAATTGAGTTATAGGCAC+TGG + chr4_2:71411578-71411597 Msa0620110:intron 40.0%
!! GGTGTGAGATAGTTGGTAAA+AGG + chr4_2:71411731-71411750 Msa0620110:CDS 40.0%
CCCAATATGTCACGTTCATA+TGG + chr4_2:71411756-71411775 Msa0620110:CDS 40.0%
TATGGATGGTATCATCGTTG+AGG + chr4_2:71411774-71411793 Msa0620110:CDS 40.0%
TATTGAACAGGTCCGAACTA+TGG + chr4_2:71412347-71412366 Msa0620110:intron 40.0%
TCTTGAAAAGAAGTAGCTGC+AGG - chr4_2:71412375-71412394 None:intergenic 40.0%
!! TGCAGCTACTTCTTTTCAAG+AGG + chr4_2:71412374-71412393 Msa0620110:CDS 40.0%
! AAGAGGATTGTGGTGAGTTT+TGG + chr4_2:71412391-71412410 Msa0620110:intron 40.0%
AATTAGAATTGCTGCTCGCT+TGG + chr4_2:71412561-71412580 Msa0620110:CDS 40.0%
ATTAGAATTGCTGCTCGCTT+GGG + chr4_2:71412562-71412581 Msa0620110:CDS 40.0%
! CTTTAACTTCGACATTGACG+AGG + chr4_2:71412683-71412702 Msa0620110:intron 40.0%
ACGAGGATATTATGTGGCTT+AGG + chr4_2:71412700-71412719 Msa0620110:intron 40.0%
!!! CTGTTTTAGCCTTTTAGGGT+AGG + chr4_2:71412734-71412753 Msa0620110:intron 40.0%
TATATGCTGGCATATGGATC+TGG + chr4_2:71412775-71412794 Msa0620110:CDS 40.0%
TTCGTCATGGATTTCGAAGA+CGG + chr4_2:71412948-71412967 Msa0620110:CDS 40.0%
! GCAGAATTCAAGTTATGCAC+TGG + chr4_2:71413033-71413052 Msa0620110:intron 40.0%
TCCTGATCTTTGGTCCTTTA+AGG + chr4_2:71413129-71413148 Msa0620110:intron 40.0%
ACCTTAAAGGACCAAAGATC+AGG - chr4_2:71413133-71413152 None:intergenic 40.0%
TATGTGCGCTCAAACCTTAA+AGG - chr4_2:71413146-71413165 None:intergenic 40.0%
!! CTATGGCTTTAGTTCTTGCA+AGG + chr4_2:71413249-71413268 Msa0620110:intron 40.0%
AGACTAAAGATTAGGGATGG+AGG + chr4_2:71413352-71413371 Msa0620110:intron 40.0%
GACTAAAGATTAGGGATGGA+GGG + chr4_2:71413353-71413372 Msa0620110:intron 40.0%
TTATGTAAAGGCTGGGTAGA+AGG - chr4_2:71413406-71413425 None:intergenic 40.0%
GCAAGGATTATGTAAAGGCT+GGG - chr4_2:71413413-71413432 None:intergenic 40.0%
TGCAAGGATTATGTAAAGGC+TGG - chr4_2:71413414-71413433 None:intergenic 40.0%
GATGAGTACGATATATCCTC+AGG - chr4_2:71413488-71413507 None:intergenic 40.0%
AGTTACGAACAGCAAATGGA+AGG + chr4_2:71413623-71413642 Msa0620110:intron 40.0%
GTTACGAACAGCAAATGGAA+GGG + chr4_2:71413624-71413643 Msa0620110:intron 40.0%
TTACGAACAGCAAATGGAAG+GGG + chr4_2:71413625-71413644 Msa0620110:intron 40.0%
TACCATAAGCTGCTATGACA+CGG - chr4_2:71413839-71413858 None:intergenic 40.0%
! AAACAGGCATTGTTGTTGCA+TGG - chr4_2:71413866-71413885 None:intergenic 40.0%
!! GATGCATGCGAAAAAGTATC+AGG - chr4_2:71414075-71414094 None:intergenic 40.0%
!! CTTTTTCGCATGCATCAATG+GGG + chr4_2:71414079-71414098 Msa0620110:intron 40.0%
GGTTTGTGGGTAATATGAAC+AGG + chr4_2:71414116-71414135 Msa0620110:intron 40.0%
GTGTAAGATCTCATTTCAGG+AGG - chr4_2:71414149-71414168 None:intergenic 40.0%
CAGAGGAAAGTAAAAAGGCA+TGG - chr4_2:71414182-71414201 None:intergenic 40.0%
CTTTCCTCTGCATAAAGAGA+TGG + chr4_2:71414192-71414211 Msa0620110:intron 40.0%
ACAACCATCTCTTTATGCAG+AGG - chr4_2:71414199-71414218 None:intergenic 40.0%
AGAGATGGTTGTTAACCATC+AGG + chr4_2:71414207-71414226 Msa0620110:intron 40.0%
GAGATGGTTGTTAACCATCA+GGG + chr4_2:71414208-71414227 Msa0620110:intron 40.0%
! TATGCCATCTTTTGCCTTGT+GGG + chr4_2:71414253-71414272 Msa0620110:intron 40.0%
TGGAAATTCCGCCTTAATTG+CGG + chr4_2:71414708-71414727 Msa0620110:intron 40.0%
CTAACCAAAGGTCGCAATTT+AGG - chr4_2:71414748-71414767 None:intergenic 40.0%
CCTTACAAAACCAGCTTGTA+AGG - chr4_2:71414878-71414897 None:intergenic 40.0%
!!! CCTTACAAGCTGGTTTTGTA+AGG + chr4_2:71414875-71414894 Msa0620110:intron 40.0%
TCATCACGTCAAGACTCATA+AGG + chr4_2:71415150-71415169 Msa0620110:intron 40.0%
CTAAATGCAGCAATCACCAA+AGG - chr4_2:71415240-71415259 None:intergenic 40.0%
TTCCACCATTATGAACAGCA+AGG - chr4_2:71415263-71415282 None:intergenic 40.0%
CCTGAATTATCAGATCCTTG+CGG + chr4_2:71415342-71415361 Msa0620110:CDS 40.0%
!! GGCTTTGGAAAATGAGATTC+TGG + chr4_2:71415377-71415396 Msa0620110:CDS 40.0%
TGCTCACCATATCTGAATGA+GGG - chr4_2:71415488-71415507 None:intergenic 40.0%
ATGCTCACCATATCTGAATG+AGG - chr4_2:71415489-71415508 None:intergenic 40.0%
!! GTATATGTGCTGTTTGTGAG+TGG - chr4_2:71415642-71415661 None:intergenic 40.0%
! GCAAACAAGTGTCGTATTTC+TGG - chr4_2:71416107-71416126 None:intergenic 40.0%
ACTGTATATCCACTACACCT+TGG + chr4_2:71416143-71416162 Msa0620110:CDS 40.0%
AGCATTCAATCATAGGGGAA+CGG + chr4_2:71416247-71416266 Msa0620110:three_prime_UTR 40.0%
! ACGGCTAGTCGAATGAAATT+TGG + chr4_2:71416266-71416285 Msa0620110:three_prime_UTR 40.0%
! CCAGAAGCTGTTGTTGATTA+AGG - chr4_2:71416390-71416409 None:intergenic 40.0%
CCTTAATCAACAACAGCTTC+TGG + chr4_2:71416387-71416406 Msa0620110:three_prime_UTR 40.0%
! TAGGTGAATTTTGTTGGGGA+TGG - chr4_2:71416485-71416504 None:intergenic 40.0%
! TCAACAGAAGGTACGGATCT+TGG - chr4_2:71410383-71410402 None:intergenic 45.0%
! ATCTGGCTCAACAGAAGGTA+CGG - chr4_2:71410390-71410409 None:intergenic 45.0%
! CATTCATCTGGCTCAACAGA+AGG - chr4_2:71410395-71410414 None:intergenic 45.0%
! GTTGTTGTTGTTGCTGCTGT+AGG + chr4_2:71410770-71410789 Msa0620110:intron 45.0%
AACTTCAGCGGATCTTAGAG+AGG + chr4_2:71410868-71410887 Msa0620110:CDS 45.0%
TGTTTAGACGGTAGCTTACC+TGG + chr4_2:71410930-71410949 Msa0620110:intron 45.0%
CTTGATCTACGGAGTAATCC+AGG - chr4_2:71410951-71410970 None:intergenic 45.0%
GGAAAATACAAGGTTGGGAG+AGG - chr4_2:71411528-71411547 None:intergenic 45.0%
GATGGTATCATCGTTGAGGT+TGG + chr4_2:71411778-71411797 Msa0620110:intron 45.0%
TCTTTACTGGGGTGATTGCT+AGG + chr4_2:71411845-71411864 Msa0620110:intron 45.0%
! TCATGAGCAAAGTGTCTACC+AGG - chr4_2:71411952-71411971 None:intergenic 45.0%
! TCATGATATTGAGGCACCCA+AGG + chr4_2:71411966-71411985 Msa0620110:CDS 45.0%
! CATGATATTGAGGCACCCAA+GGG + chr4_2:71411967-71411986 Msa0620110:CDS 45.0%
TAGCTGCAGGAACCATAGTT+CGG - chr4_2:71412362-71412381 None:intergenic 45.0%
TTGGGCAGTGTAAACTTCCT+CGG + chr4_2:71412461-71412480 Msa0620110:intron 45.0%
ATGCGAGCTGCAGAAAGAAA+TGG - chr4_2:71412532-71412551 None:intergenic 45.0%
TTAGAATTGCTGCTCGCTTG+GGG + chr4_2:71412563-71412582 Msa0620110:CDS 45.0%
CATCAGAAGCCTACCCTAAA+AGG - chr4_2:71412746-71412765 None:intergenic 45.0%
!!! CTTTTAGGGTAGGCTTCTGA+TGG + chr4_2:71412744-71412763 Msa0620110:intron 45.0%
GATCTGGTGAACCTTCTTTG+AGG + chr4_2:71412791-71412810 Msa0620110:CDS 45.0%
! GCTCGTTACTTTGTTCGTCA+TGG + chr4_2:71412935-71412954 Msa0620110:CDS 45.0%
TCGTCATGGATTTCGAAGAC+GGG + chr4_2:71412949-71412968 Msa0620110:CDS 45.0%
CGCTCTATCATCCTGATCTT+TGG + chr4_2:71413119-71413138 Msa0620110:intron 45.0%
TTCCTTGGTTCCAATACCTG+AGG + chr4_2:71413469-71413488 Msa0620110:intron 45.0%
!! ATCCTCAGGTATTGGAACCA+AGG - chr4_2:71413474-71413493 None:intergenic 45.0%
GGAAAAATAATTCCCCACCC+TGG - chr4_2:71413651-71413670 None:intergenic 45.0%
TGCATCAATGGGGTCTAACT+TGG + chr4_2:71414089-71414108 Msa0620110:intron 45.0%
AATGGGGTCTAACTTGGAGA+GGG + chr4_2:71414095-71414114 Msa0620110:intron 45.0%
TCTAACTTGGAGAGGGTTTG+TGG + chr4_2:71414102-71414121 Msa0620110:intron 45.0%
CTAACTTGGAGAGGGTTTGT+GGG + chr4_2:71414103-71414122 Msa0620110:intron 45.0%
! CTATGCCATCTTTTGCCTTG+TGG + chr4_2:71414252-71414271 Msa0620110:intron 45.0%
! ATGCCATCTTTTGCCTTGTG+GGG + chr4_2:71414254-71414273 Msa0620110:intron 45.0%
GTTTCTCAGATTTGAGTGCC+AGG + chr4_2:71414307-71414326 Msa0620110:intron 45.0%
AAAATGTTAACGAGTGCCCC+CGG + chr4_2:71414519-71414538 Msa0620110:intron 45.0%
GTCGCAATTTAGGCAACTAG+GGG - chr4_2:71414738-71414757 None:intergenic 45.0%
GGTCGCAATTTAGGCAACTA+GGG - chr4_2:71414739-71414758 None:intergenic 45.0%
AGGTCGCAATTTAGGCAACT+AGG - chr4_2:71414740-71414759 None:intergenic 45.0%
GTTGCCTAAATTGCGACCTT+TGG + chr4_2:71414741-71414760 Msa0620110:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr4_2:71414760-71414779 None:intergenic 45.0%
!! CTTCATTGTGGTGGCTTTGA+GGG + chr4_2:71414790-71414809 Msa0620110:intron 45.0%
!! TTCATTGTGGTGGCTTTGAG+GGG + chr4_2:71414791-71414810 Msa0620110:intron 45.0%
TAGTCCCACATCGGATAGAT+AGG + chr4_2:71414821-71414840 Msa0620110:intron 45.0%
GAGTCCTATCTATCCGATGT+GGG - chr4_2:71414828-71414847 None:intergenic 45.0%
AGAGTCCTATCTATCCGATG+TGG - chr4_2:71414829-71414848 None:intergenic 45.0%
CAAAACCAGCTTGTAAGGTG+AGG - chr4_2:71414873-71414892 None:intergenic 45.0%
GGAATCAATGCTTTCAGGGT+TGG + chr4_2:71415171-71415190 Msa0620110:intron 45.0%
TGATCAACCGAGGAATCCTT+TGG + chr4_2:71415221-71415240 Msa0620110:CDS 45.0%
GCAATCACCAAAGGATTCCT+CGG - chr4_2:71415231-71415250 None:intergenic 45.0%
!! AGCCTTGCTGTTCATAATGG+TGG + chr4_2:71415258-71415277 Msa0620110:CDS 45.0%
TGGAAGCAGTAGACATAGCT+AGG + chr4_2:71415289-71415308 Msa0620110:CDS 45.0%
AAGCAGTAGACATAGCTAGG+AGG + chr4_2:71415292-71415311 Msa0620110:CDS 45.0%
TCAGGAAATCTGATGTCGTG+TGG - chr4_2:71415327-71415346 None:intergenic 45.0%
CCGCAAGGATCTGATAATTC+AGG - chr4_2:71415345-71415364 None:intergenic 45.0%
CACTGTTGCAGATGACATCT+AGG + chr4_2:71415424-71415443 Msa0620110:intron 45.0%
ATATCTGAATGAGGGGCTTG+TGG - chr4_2:71415480-71415499 None:intergenic 45.0%
ACAAGCCCCTCATTCAGATA+TGG + chr4_2:71415479-71415498 Msa0620110:CDS 45.0%
GCTCACCATATCTGAATGAG+GGG - chr4_2:71415487-71415506 None:intergenic 45.0%
!! TGTTTGTGAGTGGTGGATGA+GGG - chr4_2:71415632-71415651 None:intergenic 45.0%
!! TATGTGCTGTTTGTGAGTGG+TGG - chr4_2:71415639-71415658 None:intergenic 45.0%
TGACAGGTGTTCATCCCATT+AGG + chr4_2:71415966-71415985 Msa0620110:intron 45.0%
GATTACGAATCCTTAGCTCG+TGG + chr4_2:71416074-71416093 Msa0620110:CDS 45.0%
!! ACAAGTGTCGTATTTCTGGC+AGG - chr4_2:71416103-71416122 None:intergenic 45.0%
! TGGTCATTTAGGACTGACCA+AGG - chr4_2:71416163-71416182 None:intergenic 45.0%
! TTTGGAACAAAGTGCGGTGA+AGG + chr4_2:71416284-71416303 Msa0620110:three_prime_UTR 45.0%
TCCAGCATCTGACATTTGAG+TGG + chr4_2:71416313-71416332 Msa0620110:three_prime_UTR 45.0%
ACCACTCAAATGTCAGATGC+TGG - chr4_2:71416317-71416336 None:intergenic 45.0%
AATCAACAACAGCTTCTGGG+TGG + chr4_2:71416391-71416410 Msa0620110:three_prime_UTR 45.0%
ATCAACAACAGCTTCTGGGT+GGG + chr4_2:71416392-71416411 Msa0620110:three_prime_UTR 45.0%
!! AATAAAATTTATTAAATCTA+TGG + chr4_2:71413232-71413251 Msa0620110:intron 5.0%
!!! TTTTATTTTTAAAATTTAAC+AGG + chr4_2:71414418-71414437 Msa0620110:intron 5.0%
AGATACCTTGCGGGCACATT+GGG - chr4_2:71410272-71410291 None:intergenic 50.0%
AAGATACCTTGCGGGCACAT+TGG - chr4_2:71410273-71410292 None:intergenic 50.0%
GGTTACCGACCTAGAAAGCT+TGG - chr4_2:71410740-71410759 None:intergenic 50.0%
ACCTTGTAGGAGGTTGTGTC+CGG + chr4_2:71410804-71410823 Msa0620110:CDS 50.0%
GTGACTCCGATGAGAACACT+TGG + chr4_2:71411079-71411098 Msa0620110:intron 50.0%
GGTAGGTAACAATGAAGGGG+AGG - chr4_2:71411218-71411237 None:intergenic 50.0%
AACACTGCCAAATGCAAGCC+TGG + chr4_2:71411931-71411950 Msa0620110:CDS 50.0%
GTGTCTACCAGGCTTGCATT+TGG - chr4_2:71411941-71411960 None:intergenic 50.0%
TCCTCCTTGTCACATCCCTT+GGG - chr4_2:71411985-71412004 None:intergenic 50.0%
ACAAGGAGGACTATCTTCGC+TGG + chr4_2:71411995-71412014 Msa0620110:CDS 50.0%
CAGAAGAGTAGGTATGTCCG+AGG - chr4_2:71412481-71412500 None:intergenic 50.0%
CGAGCTGCAGAAAGAAATGG+AGG - chr4_2:71412529-71412548 None:intergenic 50.0%
! GGATGGAGGGAGTATGTGTT+TGG + chr4_2:71413366-71413385 Msa0620110:intron 50.0%
! CTGCTATGACACGGACTGTT+AGG - chr4_2:71413830-71413849 None:intergenic 50.0%
GTCCGTGTCATAGCAGCTTA+TGG + chr4_2:71413834-71413853 Msa0620110:intron 50.0%
GAATGTTCCATGGCAGCCAT+AGG - chr4_2:71414028-71414047 None:intergenic 50.0%
CAATGGGGTCTAACTTGGAG+AGG + chr4_2:71414094-71414113 Msa0620110:intron 50.0%
CTACCCCACAAGGCAAAAGA+TGG - chr4_2:71414260-71414279 None:intergenic 50.0%
AAATGTTAACGAGTGCCCCC+GGG + chr4_2:71414520-71414539 Msa0620110:intron 50.0%
GCAATTTAGGCAACTAGGGG+AGG - chr4_2:71414735-71414754 None:intergenic 50.0%
AGCCTCCAACACCTTCATTG+TGG + chr4_2:71414778-71414797 Msa0620110:intron 50.0%
!! CACCACAATGAAGGTGTTGG+AGG - chr4_2:71414783-71414802 None:intergenic 50.0%
CTCCAACACCTTCATTGTGG+TGG + chr4_2:71414781-71414800 Msa0620110:intron 50.0%
! AGCCACCACAATGAAGGTGT+TGG - chr4_2:71414786-71414805 None:intergenic 50.0%
CCTCAAAGCCACCACAATGA+AGG - chr4_2:71414792-71414811 None:intergenic 50.0%
! CCTTCATTGTGGTGGCTTTG+AGG + chr4_2:71414789-71414808 Msa0620110:intron 50.0%
!! TCATTGTGGTGGCTTTGAGG+GGG + chr4_2:71414792-71414811 Msa0620110:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr4_2:71414812-71414831 Msa0620110:intron 50.0%
TCCTTGCGGTCTGAATGCAA+AGG + chr4_2:71415356-71415375 Msa0620110:CDS 50.0%
CGGTCTGAATGCAAAGGCTT+TGG + chr4_2:71415362-71415381 Msa0620110:CDS 50.0%
GCAGATGACATCTAGGCACT+CGG + chr4_2:71415431-71415450 Msa0620110:intron 50.0%
!! TCCAACAAGTGGACTGGAGT+AGG + chr4_2:71415546-71415565 Msa0620110:intron 50.0%
TCCTACTCCAGTCCACTTGT+TGG - chr4_2:71415550-71415569 None:intergenic 50.0%
!! CTGTTTGTGAGTGGTGGATG+AGG - chr4_2:71415633-71415652 None:intergenic 50.0%
CTGATACCGGTAATGCCACT+AGG - chr4_2:71415709-71415728 None:intergenic 50.0%
TAGGACTGACCAAGGTGTAG+TGG - chr4_2:71416155-71416174 None:intergenic 50.0%
CCTTGTAGGAGGTTGTGTCC+GGG + chr4_2:71410805-71410824 Msa0620110:CDS 55.0%
ACCCAAGGGATGTGACAAGG+AGG + chr4_2:71411981-71412000 Msa0620110:CDS 55.0%
GTCCTCCTTGTCACATCCCT+TGG - chr4_2:71411986-71412005 None:intergenic 55.0%
AGGAGGACTATCTTCGCTGG+AGG + chr4_2:71411998-71412017 Msa0620110:CDS 55.0%
AACAGCAAATGGAAGGGGCC+AGG + chr4_2:71413630-71413649 Msa0620110:intron 55.0%
ACAGCAAATGGAAGGGGCCA+GGG + chr4_2:71413631-71413650 Msa0620110:intron 55.0%
AGGTGCGACACTCTTCATCC+TGG - chr4_2:71414328-71414347 None:intergenic 55.0%
AATGTTAACGAGTGCCCCCG+GGG + chr4_2:71414521-71414540 Msa0620110:intron 55.0%
AGCTTCCTTAACCAGTGCCC+CGG - chr4_2:71414541-71414560 None:intergenic 55.0%
TCTTGTTAACCAGTGCCCCG+GGG - chr4_2:71414670-71414689 None:intergenic 55.0%
! GTCTTGTTAACCAGTGCCCC+GGG - chr4_2:71414671-71414690 None:intergenic 55.0%
!! GGTCTTGTTAACCAGTGCCC+CGG - chr4_2:71414672-71414691 None:intergenic 55.0%
CTAGGGGAGGACCGCAATTA+AGG - chr4_2:71414722-71414741 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr4_2:71414771-71414790 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+TGG + chr4_2:71414865-71414884 Msa0620110:intron 55.0%
GCCTTTGCATTCAGACCGCA+AGG - chr4_2:71415360-71415379 None:intergenic 55.0%
CGGGCACATTGGGATGGGAT+AGG - chr4_2:71410262-71410281 None:intergenic 60.0%
CCTTGCGGGCACATTGGGAT+GGG - chr4_2:71410267-71410286 None:intergenic 60.0%
ACCTTGCGGGCACATTGGGA+TGG - chr4_2:71410268-71410287 None:intergenic 60.0%
CCCGGACACAACCTCCTACA+AGG - chr4_2:71410808-71410827 None:intergenic 60.0%
GGCACCCAAGGGATGTGACA+AGG + chr4_2:71411978-71411997 Msa0620110:CDS 60.0%
CAAATGGAAGGGGCCAGGGT+GGG + chr4_2:71413635-71413654 Msa0620110:intron 60.0%
AAATGGAAGGGGCCAGGGTG+GGG + chr4_2:71413636-71413655 Msa0620110:intron 60.0%
TCCAGTGCCTATGGCTGCCA+TGG + chr4_2:71414018-71414037 Msa0620110:intron 60.0%
TCCATGGCAGCCATAGGCAC+TGG - chr4_2:71414022-71414041 None:intergenic 60.0%
TTCCTTAACCAGTGCCCCGG+GGG - chr4_2:71414538-71414557 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG - chr4_2:71414539-71414558 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG - chr4_2:71414650-71414669 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+CGG + chr4_2:71414650-71414669 Msa0620110:intron 60.0%
CTTCCTTAACCAGTGCCCCC+GGG + chr4_2:71414651-71414670 Msa0620110:intron 60.0%
TTCCTTAACCAGTGCCCCCG+GGG + chr4_2:71414652-71414671 Msa0620110:intron 60.0%
CTTGTTAACCAGTGCCCCGG+GGG - chr4_2:71414669-71414688 None:intergenic 60.0%
GGGGAGGACCGCAATTAAGG+CGG - chr4_2:71414719-71414738 None:intergenic 60.0%
!! TTGTGGTGGCTTTGAGGGGG+TGG + chr4_2:71414795-71414814 Msa0620110:intron 60.0%
GCACTCGGTAGCTCGAGCTA+TGG + chr4_2:71415446-71415465 Msa0620110:CDS 60.0%
TGGCAGGTCACCACGAGCTA+AGG - chr4_2:71416087-71416106 None:intergenic 60.0%
CCCATCCCAATGTGCCCGCA+AGG + chr4_2:71410264-71410283 Msa0620110:CDS 65.0%
GCAAATGGAAGGGGCCAGGG+TGG + chr4_2:71413634-71413653 Msa0620110:intron 65.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + chr4_2:71414533-71414552 Msa0620110:intron 70.0%
!! TGCCCCGGGGGCACTGGTTA+AGG - chr4_2:71414657-71414676 None:intergenic 70.0%
AACGAGTGCCCCCGGGGCAC+TGG + chr4_2:71414527-71414546 Msa0620110:intron 75.0%
AACCAGTGCCCCCGGGGCAC+TGG + chr4_2:71414658-71414677 Msa0620110:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG - chr4_2:71414532-71414551 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 71410172 71416699 71410172 ID=Msa0620110;Name=Msa0620110
chr4_2 mRNA 71410172 71416699 71410172 ID=Msa0620110-mRNA-1;Parent=Msa0620110;Name=Msa0620110-mRNA-1;_AED=0.20;_eAED=0.20;_QI=33|0.78|0.73|1|0.71|0.66|15|524|496
chr4_2 exon 71410172 71410285 71410172 ID=Msa0620110-mRNA-1:exon:21134;Parent=Msa0620110-mRNA-1
chr4_2 exon 71410374 71410413 71410374 ID=Msa0620110-mRNA-1:exon:21135;Parent=Msa0620110-mRNA-1
chr4_2 exon 71410585 71410695 71410585 ID=Msa0620110-mRNA-1:exon:21136;Parent=Msa0620110-mRNA-1
chr4_2 exon 71410792 71410889 71410792 ID=Msa0620110-mRNA-1:exon:21137;Parent=Msa0620110-mRNA-1
chr4_2 exon 71411712 71411795 71411712 ID=Msa0620110-mRNA-1:exon:21138;Parent=Msa0620110-mRNA-1
chr4_2 exon 71411919 71412052 71411919 ID=Msa0620110-mRNA-1:exon:21139;Parent=Msa0620110-mRNA-1
chr4_2 exon 71412192 71412264 71412192 ID=Msa0620110-mRNA-1:exon:21140;Parent=Msa0620110-mRNA-1
chr4_2 exon 71412357 71412402 71412357 ID=Msa0620110-mRNA-1:exon:21141;Parent=Msa0620110-mRNA-1
chr4_2 exon 71412545 71412654 71412545 ID=Msa0620110-mRNA-1:exon:21142;Parent=Msa0620110-mRNA-1
chr4_2 exon 71412751 71412858 71412751 ID=Msa0620110-mRNA-1:exon:21143;Parent=Msa0620110-mRNA-1
chr4_2 exon 71412935 71412994 71412935 ID=Msa0620110-mRNA-1:exon:21144;Parent=Msa0620110-mRNA-1
chr4_2 exon 71413794 71413837 71413794 ID=Msa0620110-mRNA-1:exon:21145;Parent=Msa0620110-mRNA-1
chr4_2 exon 71415188 71415419 71415188 ID=Msa0620110-mRNA-1:exon:21146;Parent=Msa0620110-mRNA-1
chr4_2 exon 71415435 71415500 71415435 ID=Msa0620110-mRNA-1:exon:21147;Parent=Msa0620110-mRNA-1
chr4_2 exon 71415972 71416699 71415972 ID=Msa0620110-mRNA-1:exon:21148;Parent=Msa0620110-mRNA-1
chr4_2 five_prime_UTR 71410172 71410204 71410172 ID=Msa0620110-mRNA-1:five_prime_utr;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71410205 71410285 71410205 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71410374 71410413 71410374 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71410585 71410695 71410585 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71410792 71410889 71410792 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71411712 71411795 71411712 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71411919 71412052 71411919 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71412192 71412264 71412192 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71412357 71412402 71412357 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71412545 71412654 71412545 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71412751 71412858 71412751 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71412935 71412994 71412935 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71413794 71413837 71413794 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71415188 71415419 71415188 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71415435 71415500 71415435 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 CDS 71415972 71416175 71415972 ID=Msa0620110-mRNA-1:cds;Parent=Msa0620110-mRNA-1
chr4_2 three_prime_UTR 71416176 71416699 71416176 ID=Msa0620110-mRNA-1:three_prime_utr;Parent=Msa0620110-mRNA-1
Gene Sequence

>Msa0620110

ATGGCAATTTCGACCTTAAAATTAGTCTGCAAACCCAATCTTCTTCATCTTCGTCCTATCCCATCCCAATGTGCCCGCAAGGTTGTACCAAGATCCGTACCTTCTGTTGAGCCAGATGAATTAAATAAGAAGGCTCCAGCATGGAAGAAGATGAATTCAAAAGAGCTTGGATTTCGAAATTCCATGATTGCTAGTCCAATTAAAAAGGTTCTCAACATGTTGAAGAAAAAGGGGTATAATGTTTACCTTGTAGGAGGTTGTGTCCGGGACATGATACTAAAGCAAACGCCAAAAGATTTTGATATTTTAACTTCAGCGGATCTTAGAGAGGTGATGAGAACATTTTCATGGTGTGAGATAGTTGGTAAAAGGTTCCCAATATGTCACGTTCATATGGATGGTATCATCGTTGAGGTTTCAAGTTTTAACACTGCCAAATGCAAGCCTGGTAGACACTTTGCTCATGATATTGAGGCACCCAAGGGATGTGACAAGGAGGACTATCTTCGCTGGAGGAATTGCTTGAATAGAGATTTTACAATTAATGGGTTCATGTTTGATCCATTTGCCAAAATTGTATATGATTACATGGGAGGAATGGAAGATATTATAAAAGCTAAAGTCCGAACTATGGTTCCTGCAGCTACTTCTTTTCAAGAGGATTGTGCTCGCATTCTTCGTGCAATTAGAATTGCTGCTCGCTTGGGGTTTACTATTTCAACTGAAACCGCTCGTTCTGTTAAACATCTTTCATATTCAGTATTAAGACTTGATAAGGGTAGGCTTCTGATGGAAATGAATTATATGCTGGCATATGGATCTGGTGAACCTTCTTTGAGGCTATTATGGAAATTTGGACTTCTAGATATTCTTCTTCCCTTTCAGGCTCGTTACTTTGTTCGTCATGGATTTCGAAGACGGGACAAAAGAACCAATATGCTTTTGTCTTTCTTCTTCAATTTGGATAAACTTTTGGCTCCTAACAGTCCGGTTGGTATCCTTGCATTGCATAAATCTTTAAGTGATCAACCGAGGAATCCTTTGGTGATTGCTGCATTTAGCCTTGCTGTTCATAATGGTGGAAATTTATTGGAAGCAGTAGACATAGCTAGGAGGATAAACAAACCACACGACATCAGATTTCCTGAATTATCAGATCCTTGCGGTCTGAATGCAAAGGCTTTGGAAAATGAGATTCTGGATCTTGCAGAGTCTGTTAAAATGACATCTAGGCACTCGGTAGCTCGAGCTATGGTTGACTATCCACAAGCCCCTCATTCAGATATGGTGTTCATCCCATTAGGAATGTACCTAAAAGCTCTAAGCATTTTTGACTGTCTGAAAGTAAGTTCTTGCAAGAAATTCTTGTCCAAGAAAAGCAGAAAAATTGATTACGAATCCTTAGCTCGTGGTGACCTGCCAGAAATACGACACTTGTTTGCAAGGGTTGTATTTGACACTGTATATCCACTACACCTTGGTCAGTCCTAA

Protein sequence

>Msa0620110

MAISTLKLVCKPNLLHLRPIPSQCARKVVPRSVPSVEPDELNKKAPAWKKMNSKELGFRNSMIASPIKKVLNMLKKKGYNVYLVGGCVRDMILKQTPKDFDILTSADLREVMRTFSWCEIVGKRFPICHVHMDGIIVEVSSFNTAKCKPGRHFAHDIEAPKGCDKEDYLRWRNCLNRDFTINGFMFDPFAKIVYDYMGGMEDIIKAKVRTMVPAATSFQEDCARILRAIRIAARLGFTISTETARSVKHLSYSVLRLDKGRLLMEMNYMLAYGSGEPSLRLLWKFGLLDILLPFQARYFVRHGFRRRDKRTNMLLSFFFNLDKLLAPNSPVGILALHKSLSDQPRNPLVIAAFSLAVHNGGNLLEAVDIARRINKPHDIRFPELSDPCGLNAKALENEILDLAESVKMTSRHSVARAMVDYPQAPHSDMVFIPLGMYLKALSIFDCLKVSSCKKFLSKKSRKIDYESLARGDLPEIRHLFARVVFDTVYPLHLGQS*