AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0500660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0500660 MtrunA17_Chr3g0133801 98.341 422 7 0 14 435 1 422 0.0 857
Msa0500660 MtrunA17_Chr1g0153671 84.286 420 62 3 14 432 1 417 0.0 733
Msa0500660 MtrunA17_Chr1g0209451 58.824 425 167 5 16 436 6 426 1.03e-180 512
Msa0500660 MtrunA17_Chr7g0271971 57.279 419 176 2 17 435 8 423 1.38e-167 478
Msa0500660 MtrunA17_Chr1g0192471 55.961 411 178 2 23 432 14 422 2.44e-159 457
Msa0500660 MtrunA17_Chr7g0225501 53.630 427 162 16 23 432 32 439 2.66e-125 371
Msa0500660 MtrunA17_Chr2g0326251 48.357 213 94 8 120 326 7 209 1.21e-50 171
Msa0500660 MtrunA17_Chr1g0150451 30.738 244 145 8 79 317 108 332 4.26e-25 105
Msa0500660 MtrunA17_Chr3g0136711 28.514 249 154 8 79 322 65 294 2.54e-23 99.8
Msa0500660 MtrunA17_Chr1g0212961 32.766 235 134 11 80 311 127 340 3.30e-22 97.4
Msa0500660 MtrunA17_Chr3g0105351 27.273 242 155 8 73 308 88 314 6.66e-22 96.3
Msa0500660 MtrunA17_Chr3g0105371 28.279 244 150 9 73 308 112 338 1.73e-21 95.5
Msa0500660 MtrunA17_Chr2g0317021 29.362 235 142 9 79 308 117 332 9.28e-21 93.2
Msa0500660 MtrunA17_Chr8g0360351 32.766 235 130 12 79 306 66 279 1.99e-20 91.3
Msa0500660 MtrunA17_Chr4g0070871 28.626 262 142 8 80 308 254 503 2.40e-20 93.6
Msa0500660 MtrunA17_Chr5g0430481 28.689 244 149 10 73 308 148 374 6.55e-20 91.3
Msa0500660 MtrunA17_Chr1g0150781 31.206 282 122 12 80 313 291 548 1.61e-19 91.3
Msa0500660 MtrunA17_Chr3g0126511 29.520 271 159 9 57 321 108 352 1.95e-19 89.7
Msa0500660 MtrunA17_Chr3g0135961 28.772 285 139 10 76 316 283 547 1.28e-17 85.5
Msa0500660 MtrunA17_Chr1g0171571 29.675 246 140 7 80 310 419 646 3.48e-17 84.3
Msa0500660 MtrunA17_Chr1g0158781 29.960 247 142 8 80 308 146 379 7.47e-17 82.0
Msa0500660 MtrunA17_Chr8g0389921 26.792 265 161 9 74 316 193 446 2.70e-16 80.9
Msa0500660 MtrunA17_Chr2g0279151 27.897 233 144 9 79 306 65 278 5.36e-16 78.2
Msa0500660 MtrunA17_Chr4g0065141 27.985 268 144 11 70 315 117 357 6.66e-16 79.3
Msa0500660 MtrunA17_Chr4g0051661 30.213 235 135 10 79 306 183 395 1.18e-15 78.6
Msa0500660 MtrunA17_Chr5g0407161 25.000 252 152 8 78 315 123 351 2.16e-15 77.8
Msa0500660 MtrunA17_Chr4g0050381 26.923 234 145 9 79 306 61 274 4.54e-15 75.5
Msa0500660 MtrunA17_Chr6g0483411 26.176 340 193 13 1 306 1 316 6.75e-15 75.5
Msa0500660 MtrunA17_Chr5g0426141 27.660 235 142 9 79 306 66 279 8.94e-15 74.7
Msa0500660 MtrunA17_Chr3g0115851 26.496 234 146 8 79 306 66 279 1.39e-14 73.9
Msa0500660 MtrunA17_Chr2g0299981 24.928 345 173 13 26 313 225 540 2.31e-14 75.5
Msa0500660 MtrunA17_Chr1g0194191 27.341 267 156 12 78 323 117 366 2.41e-14 74.7
Msa0500660 MtrunA17_Chr1g0150071 26.667 315 145 14 75 323 48 342 5.37e-13 70.1
Msa0500660 MtrunA17_Chr5g0396731 28.700 223 136 7 77 290 105 313 1.43e-12 68.9
Msa0500660 MtrunA17_Chr2g0286951 28.283 297 163 15 47 308 60 341 1.44e-12 69.3
Msa0500660 MtrunA17_Chr3g0136811 31.944 144 71 5 141 273 158 285 2.36e-12 68.2
Msa0500660 MtrunA17_Chr2g0295401 27.007 274 156 12 81 315 94 362 3.74e-12 67.8
Msa0500660 MtrunA17_Chr2g0293811 26.394 269 162 10 78 327 99 350 2.10e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0500660 AT1G47380.1 76.168 428 100 1 14 441 1 426 0.0 698
Msa0500660 AT1G68410.4 56.355 417 177 2 23 436 19 433 1.10e-173 494
Msa0500660 AT1G68410.3 56.355 417 177 2 23 436 19 433 1.10e-173 494
Msa0500660 AT1G68410.1 56.355 417 177 2 23 436 19 433 1.10e-173 494
Msa0500660 AT1G68410.2 56.355 417 177 2 23 436 19 433 1.10e-173 494
Msa0500660 AT1G09160.2 56.532 421 180 2 15 435 6 423 6.98e-165 472
Msa0500660 AT1G09160.1 56.532 421 180 2 15 435 6 423 6.98e-165 472
Msa0500660 AT4G26080.1 30.545 275 146 8 72 313 165 427 2.25e-23 102
Msa0500660 AT5G57050.2 31.559 263 134 9 80 308 121 371 2.64e-23 101
Msa0500660 AT5G53140.1 29.856 278 160 9 57 324 115 367 2.83e-23 102
Msa0500660 AT5G53140.2 29.856 278 160 9 57 324 115 367 2.83e-23 102
Msa0500660 AT1G07160.1 33.824 204 112 8 78 276 152 337 3.20e-23 101
Msa0500660 AT2G34740.1 29.183 257 155 8 57 309 102 335 3.69e-23 100
Msa0500660 AT5G57050.1 31.559 263 134 9 80 308 161 411 3.97e-23 101
Msa0500660 AT4G31750.2 27.778 252 158 8 79 325 64 296 9.92e-23 98.6
Msa0500660 AT4G31750.1 27.778 252 158 8 79 325 64 296 1.49e-22 98.2
Msa0500660 AT4G31750.3 27.778 252 158 8 79 325 64 296 1.49e-22 98.2
Msa0500660 AT1G43900.1 31.624 234 135 9 78 306 153 366 4.88e-22 97.8
Msa0500660 AT5G10740.1 29.562 274 155 12 47 309 34 280 2.95e-21 95.1
Msa0500660 AT5G10740.2 29.562 274 155 12 47 309 34 280 2.95e-21 95.1
Msa0500660 AT1G78200.5 29.787 235 140 9 79 306 19 235 3.13e-21 92.8
Msa0500660 AT1G78200.4 29.787 235 140 9 79 306 19 235 3.13e-21 92.8
Msa0500660 AT5G24940.1 29.536 237 141 9 79 309 64 280 3.53e-21 96.3
Msa0500660 AT4G28400.3 29.185 233 141 8 79 306 45 258 4.74e-21 92.8
Msa0500660 AT1G78200.1 29.487 234 142 8 79 306 64 280 8.16e-21 92.8
Msa0500660 AT1G78200.3 29.487 234 142 8 79 306 64 280 8.16e-21 92.8
Msa0500660 AT1G78200.2 29.487 234 142 8 79 306 64 280 8.16e-21 92.8
Msa0500660 AT4G28400.1 29.185 233 141 8 79 306 67 280 8.48e-21 92.8
Msa0500660 AT1G22280.3 28.326 233 149 7 79 306 65 284 1.58e-20 92.0
Msa0500660 AT2G40180.1 28.689 244 155 7 72 308 154 385 3.43e-20 92.8
Msa0500660 AT1G67820.2 30.667 225 142 5 73 297 109 319 4.12e-20 92.4
Msa0500660 AT1G67820.1 30.667 225 142 5 73 297 145 355 4.48e-20 92.8
Msa0500660 AT1G22280.1 27.897 233 144 7 79 306 65 278 9.39e-19 86.7
Msa0500660 AT2G30020.1 28.333 240 147 10 78 308 169 392 1.09e-18 88.2
Msa0500660 AT2G25620.1 29.963 267 136 11 78 319 127 367 4.49e-18 86.3
Msa0500660 AT2G25620.2 29.963 267 136 11 78 319 127 367 4.49e-18 86.3
Msa0500660 AT2G20630.1 27.451 255 156 11 57 306 46 276 5.39e-18 84.3
Msa0500660 AT1G34750.2 29.362 235 138 9 79 306 66 279 6.69e-18 84.3
Msa0500660 AT1G34750.1 29.362 235 138 9 79 306 66 279 6.69e-18 84.3
Msa0500660 AT1G34750.3 29.362 235 138 9 79 306 66 279 6.69e-18 84.3
Msa0500660 AT2G20630.2 27.203 261 161 11 57 312 46 282 1.44e-17 83.6
Msa0500660 AT2G40860.1 29.730 259 141 8 70 310 415 650 1.96e-17 85.5
Msa0500660 AT3G51470.2 27.715 267 153 10 73 323 56 298 2.24e-17 83.2
Msa0500660 AT2G40860.4 29.730 259 141 8 70 310 317 552 2.36e-17 85.1
Msa0500660 AT3G51470.1 27.715 267 153 10 73 323 100 342 5.08e-17 82.8
Msa0500660 AT2G34740.2 28.704 216 129 6 57 269 116 309 9.15e-17 81.6
Msa0500660 AT2G34740.3 28.704 216 129 6 57 269 98 291 9.37e-17 81.3
Msa0500660 AT2G40860.2 29.167 240 125 7 70 284 415 634 4.69e-16 81.3
Msa0500660 AT1G17550.1 25.685 292 150 10 76 316 234 509 1.24e-14 76.6
Msa0500660 AT1G17550.2 25.685 292 150 10 76 316 234 509 1.24e-14 76.6
Msa0500660 AT3G15260.2 27.897 233 144 9 79 306 73 286 1.67e-14 74.3
Msa0500660 AT3G15260.1 27.897 233 144 9 79 306 73 286 1.67e-14 74.3
Msa0500660 AT2G33700.1 27.165 254 143 10 78 315 122 349 2.46e-14 74.7
Msa0500660 AT1G72770.4 25.773 291 150 10 76 316 235 509 9.35e-14 73.9
Msa0500660 AT1G72770.1 25.773 291 150 10 76 316 235 509 9.35e-14 73.9
Msa0500660 AT1G72770.3 25.773 291 150 10 76 316 235 509 9.35e-14 73.9
Msa0500660 AT4G27800.2 25.180 278 154 8 57 297 73 333 2.63e-13 71.2
Msa0500660 AT3G62260.3 27.668 253 152 11 78 313 26 264 3.25e-13 70.5
Msa0500660 AT4G27800.3 25.681 257 137 8 57 276 73 312 3.62e-13 70.9
Msa0500660 AT1G34750.4 29.843 191 108 7 79 263 66 236 5.44e-13 68.9
Msa0500660 AT3G62260.1 27.203 261 143 11 78 313 115 353 9.03e-13 70.1
Msa0500660 AT3G62260.2 27.203 261 143 11 78 313 116 354 9.24e-13 70.1
Msa0500660 AT1G48040.1 27.626 257 134 8 78 306 115 347 1.91e-12 68.9
Msa0500660 AT3G06270.1 26.014 296 171 11 47 308 61 342 3.43e-12 68.2
Msa0500660 AT5G57050.3 33.544 158 87 6 80 230 161 307 4.15e-12 67.4
Msa0500660 AT1G18030.2 30.435 207 105 8 80 264 110 299 4.48e-12 67.4
Msa0500660 AT5G26010.1 28.959 221 129 11 73 272 67 280 6.99e-12 67.0
Msa0500660 AT3G11410.1 26.923 234 126 8 76 280 134 351 1.19e-11 66.6
Msa0500660 AT5G27930.1 31.288 163 98 6 142 294 176 334 1.64e-11 66.2
Msa0500660 AT5G27930.2 31.288 163 98 6 142 294 176 334 1.64e-11 66.2
Msa0500660 AT3G05640.2 31.515 165 97 7 141 294 170 329 3.30e-11 65.1
Msa0500660 AT3G05640.1 31.515 165 97 7 141 294 170 329 3.30e-11 65.1
Msa0500660 AT3G05640.3 31.515 165 97 7 141 294 170 329 3.30e-11 65.1
Msa0500660 AT5G59220.1 27.138 269 159 11 32 277 94 348 5.16e-11 64.7
Msa0500660 AT2G25070.1 25.100 251 117 11 78 273 51 285 8.06e-11 63.9
Msa0500660 AT2G25070.2 25.100 251 117 11 78 273 51 285 8.06e-11 63.9

Find 157 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGATATGGTTGTTGTTTA+TGG 0.088587 3_4:+41191612 Msa0500660:CDS
CCATGGCTTCTTTCTTCTTT+TGG 0.118842 3_4:-41195476 None:intergenic
TTGCCAAGGGCTTTGGTTGC+TGG 0.194628 3_4:+41192728 Msa0500660:CDS
TAGATCTGTTCATTTGTATA+TGG 0.214122 3_4:+41195982 Msa0500660:three_prime_UTR
AAATCTTCTGATTGTTCATA+TGG 0.282600 3_4:+41195768 Msa0500660:exon
CAGAAGTAGGTGGTTTCTCC+TGG 0.297489 3_4:-41195063 None:intergenic
TAACAGTAGCATTCTGTTAG+AGG 0.298403 3_4:+41195826 Msa0500660:three_prime_UTR
CCATAAACAACAACCATATC+AGG 0.300008 3_4:-41191612 None:intergenic
ACACAAAAGAAACCGGTAAA+AGG 0.325093 3_4:+41195091 Msa0500660:CDS
ACATCATTCGGTTCCCCTTT+CGG 0.332670 3_4:+41191548 Msa0500660:CDS
CTCTCGATCCATTGGTGATA+TGG 0.341033 3_4:+41194218 Msa0500660:CDS
AGCAGCGTTGCCAAGGGCTT+TGG 0.343425 3_4:+41192721 Msa0500660:CDS
ACCTTCACTTGCTTTACATA+TGG 0.352054 3_4:-41194267 None:intergenic
TATAGTTCCCGTACCATATC+TGG 0.358257 3_4:-41195184 None:intergenic
CAGGTTATTATTCCTGACTA+TGG 0.366731 3_4:-41196150 None:intergenic
ACAGAACCTTTCGCCACTCT+TGG 0.367913 3_4:-41195884 None:intergenic
TTTATACAGCTTTCCAATGC+TGG 0.380887 3_4:+41194757 Msa0500660:intron
TTATCAGCAGTGATGGAGTC+TGG 0.394506 3_4:+41194791 Msa0500660:CDS
ATGGAAGGGAAACGGATATC+AGG 0.403186 3_4:+41195495 Msa0500660:CDS
GAAAATCGAGAAACCTGATA+TGG 0.410088 3_4:+41191599 Msa0500660:CDS
CATCTGTTTGATCCATAGTC+AGG 0.412431 3_4:+41196138 Msa0500660:three_prime_UTR
AGATCTGTTCATTTGTATAT+GGG 0.412495 3_4:+41195983 Msa0500660:three_prime_UTR
GAAATTGAGGGAACAATGTC+TGG 0.417747 3_4:+41191516 Msa0500660:CDS
ACGTAAGGAAACCGCGTCCC+TGG 0.425898 3_4:+41195427 Msa0500660:CDS
GTAACCTTCGTGATTATAGA+AGG 0.427750 3_4:+41193401 Msa0500660:CDS
TGAGGGAACAATGTCTGGTC+GGG 0.434340 3_4:+41191521 Msa0500660:CDS
AAAGACGCATAGTTTGTTGT+TGG 0.438079 3_4:-41196225 None:intergenic
TGATATCCGTTTCCCTTCCA+TGG 0.439131 3_4:-41195493 None:intergenic
AGAATACGTTGAGCCAGATA+TGG 0.445706 3_4:+41195171 Msa0500660:CDS
ATTTGTATATGGGTCTTGAA+TGG 0.446612 3_4:+41195993 Msa0500660:three_prime_UTR
CATAGTCAGGAATAATAACC+TGG 0.454424 3_4:+41196151 Msa0500660:three_prime_UTR
GTTAGAGGATTTCTGTGACT+TGG 0.454685 3_4:+41195841 Msa0500660:three_prime_UTR
CAGAACCTTTCGCCACTCTT+GGG 0.456137 3_4:-41195883 None:intergenic
GAAAATTTACAGCTATTTGA+CGG 0.459051 3_4:+41192602 Msa0500660:intron
GTGACTCCCATTATTACATC+GGG 0.459533 3_4:+41195718 Msa0500660:CDS
GGATGCTCTAACTGCAGAAA+TGG 0.466163 3_4:+41194813 Msa0500660:CDS
CAGGAATCTTTGCAAGCAAA+GGG 0.469841 3_4:+41194998 Msa0500660:intron
CACTCATCTCTGTTGAGATC+AGG 0.470329 3_4:-41192695 None:intergenic
ACTTGCTTTACATATGGTAC+AGG 0.473622 3_4:-41194261 None:intergenic
TTGCATACTTGAACCTTCTG+AGG 0.473684 3_4:+41193460 Msa0500660:CDS
GAAGTTGGTCGGCTAAATAC+AGG 0.477716 3_4:+41193656 Msa0500660:CDS
AGAAGTAGGTGGTTTCTCCT+GGG 0.481102 3_4:-41195062 None:intergenic
AGAAGGTTCAAGTATGCAAC+GGG 0.481264 3_4:-41193456 None:intergenic
GCCACTTGTATGCGCAGTGC+AGG 0.482617 3_4:+41196200 Msa0500660:three_prime_UTR
TCAGGAATCTTTGCAAGCAA+AGG 0.482677 3_4:+41194997 Msa0500660:intron
ACAAACGACTCTTTGACATT+CGG 0.486429 3_4:-41191682 None:intergenic
AACAAGTCTTCCTCCAGCAT+TGG 0.488721 3_4:-41194770 None:intergenic
CGTAAGGAAACCGCGTCCCT+GGG 0.493286 3_4:+41195428 Msa0500660:CDS
CCTTCGTGATTATAGAAGGA+TGG 0.495959 3_4:+41193405 Msa0500660:CDS
TAATATATCGACCACGATGC+AGG 0.497457 3_4:-41195038 None:intergenic
TGCACCAACACAAAAGAAAC+CGG 0.497778 3_4:+41195084 Msa0500660:CDS
AGTGGGTAGCAGCGTTGCCA+AGG 0.501821 3_4:+41192714 Msa0500660:CDS
TACTTGAACCTTCTGAGGGC+GGG 0.503212 3_4:+41193465 Msa0500660:CDS
TGTCAAGTAGAGATTAAACC+TGG 0.504586 3_4:+41195372 Msa0500660:CDS
GGGTGCGCATCACTTCTAGT+GGG 0.504965 3_4:+41193630 Msa0500660:CDS
TGTTGTGTTTGAAGAAATTG+AGG 0.508167 3_4:+41191503 Msa0500660:CDS
ACGCTTCAACAGCACCGAAA+GGG 0.508685 3_4:-41191562 None:intergenic
AGGTTGGTCCGTTGAGATGT+TGG 0.513837 3_4:+41194178 Msa0500660:intron
TAATGGGAGTCACAGTTGCT+TGG 0.518408 3_4:-41195708 None:intergenic
ATTGTTCAGAAGATTCTCCT+TGG 0.521763 3_4:-41192654 None:intergenic
AGGAAACCGCGTCCCTGGGA+TGG 0.523145 3_4:+41195432 Msa0500660:CDS
TTGTGTCTCTCTCGATCCAT+TGG 0.528406 3_4:+41194210 Msa0500660:CDS
ATATGCACAGCACAAACATC+GGG 0.532848 3_4:+41193371 Msa0500660:intron
GCAAAGGAAAGGTCCATCCC+AGG 0.532857 3_4:-41195445 None:intergenic
AAGAAGCCATGGAAGGGAAA+CGG 0.535942 3_4:+41195487 Msa0500660:CDS
GGACGCGGTTTCCTTACGTT+AGG 0.536254 3_4:-41195423 None:intergenic
GGTCCGTTGAGATGTTGGCC+TGG 0.536343 3_4:+41194183 Msa0500660:CDS
TGGTCGGGGAGAACATCATT+CGG 0.536938 3_4:+41191536 Msa0500660:CDS
CTTCGTGATTATAGAAGGAT+GGG 0.537043 3_4:+41193406 Msa0500660:CDS
ACCGGTAAAAGGAATGTTGA+AGG 0.538747 3_4:+41195102 Msa0500660:CDS
AGTCTCCTGTTATGAAGCAT+TGG 0.539442 3_4:-41195804 None:intergenic
AGACTTGTTATCAGCAGTGA+TGG 0.542264 3_4:+41194784 Msa0500660:CDS
GATCTGCCTTGCTTTCAGAA+AGG 0.546185 3_4:+41195215 Msa0500660:CDS
ATGAGGGTGCGCCTAACGTA+AGG 0.546714 3_4:+41195412 Msa0500660:CDS
ACCAAACCTTTCTGAAAGCA+AGG 0.546871 3_4:-41195221 None:intergenic
TTGTCGTGGCATGTCGGCGG+AGG 0.549386 3_4:+41194846 Msa0500660:CDS
AATGCTAGCGAGAATAAGAA+AGG 0.549595 3_4:+41191636 Msa0500660:CDS
TGGCAACTTAAGCAAAGGAA+AGG 0.552600 3_4:-41195456 None:intergenic
ACATGCCACGACAACAATCA+AGG 0.552840 3_4:-41194837 None:intergenic
CGCTTCAACAGCACCGAAAG+GGG 0.554180 3_4:-41191561 None:intergenic
CGAGAGAGACACAAGCCACC+AGG 0.557992 3_4:-41194201 None:intergenic
CTTGCTTTACATATGGTACA+GGG 0.558530 3_4:-41194260 None:intergenic
ATATTCAGAAGATTCAATGT+AGG 0.558567 3_4:-41196052 None:intergenic
TAATGAAGCCCGCCCTCAGA+AGG 0.561382 3_4:-41193473 None:intergenic
AACCTTTCGCCACTCTTGGG+TGG 0.561700 3_4:-41195880 None:intergenic
AAGAAGAAAGAAGCCATGGA+AGG 0.562499 3_4:+41195480 Msa0500660:CDS
AAGCCAGCAACCAAAGCCCT+TGG 0.562857 3_4:-41192731 None:intergenic
TGCATACTTGAACCTTCTGA+GGG 0.565442 3_4:+41193461 Msa0500660:CDS
ACGTTGAGCCAGATATGGTA+CGG 0.565764 3_4:+41195176 Msa0500660:CDS
AGGGTGCGCATCACTTCTAG+TGG 0.569055 3_4:+41193629 Msa0500660:CDS
TTGAGGGAACAATGTCTGGT+CGG 0.573524 3_4:+41191520 Msa0500660:CDS
TGCTGCTGCAATTTATGCCA+AGG 0.573567 3_4:+41192637 Msa0500660:CDS
AGAAGAAAGAAGCCATGGAA+GGG 0.574414 3_4:+41195481 Msa0500660:CDS
CATATGCACAGCACAAACAT+CGG 0.575210 3_4:+41193370 Msa0500660:intron
CGTGGTCGATATATTACCCC+AGG 0.577205 3_4:+41195045 Msa0500660:CDS
CCAAAAGAAGAAAGAAGCCA+TGG 0.583569 3_4:+41195476 Msa0500660:CDS
GTTGTAACAGTTGCATCAGT+TGG 0.584270 3_4:+41193428 Msa0500660:CDS
TCTGTTGAGATCAGGAGGAA+TGG 0.584831 3_4:-41192687 None:intergenic
ACCAACATCCATATCACCAA+TGG 0.585265 3_4:-41194226 None:intergenic
CACGCTTCAACAGCACCGAA+AGG 0.586769 3_4:-41191563 None:intergenic
TGTACTGAAATACCCTCCCC+AGG 0.587459 3_4:-41195390 None:intergenic
ATACTTGAACCTTCTGAGGG+CGG 0.588848 3_4:+41193464 Msa0500660:CDS
TGATCTCAACAGAGATGAGT+GGG 0.595669 3_4:+41192697 Msa0500660:CDS
AAAGGTCCATCCCAGGGACG+CGG 0.595744 3_4:-41195438 None:intergenic
GAGGGAACAATGTCTGGTCG+GGG 0.598719 3_4:+41191522 Msa0500660:CDS
TCCATTGGTGATATGGATGT+TGG 0.599313 3_4:+41194225 Msa0500660:CDS
TGTGACTCCCATTATTACAT+CGG 0.599756 3_4:+41195717 Msa0500660:CDS
AGTAGAGATTAAACCTGGGG+AGG 0.600098 3_4:+41195377 Msa0500660:CDS
CAGCTATTTGACGGACACAA+TGG 0.601732 3_4:+41192611 Msa0500660:intron
GTTGTGTTTGAAGAAATTGA+GGG 0.602546 3_4:+41191504 Msa0500660:CDS
GTAGAGATTAAACCTGGGGA+GGG 0.602809 3_4:+41195378 Msa0500660:CDS
TGTGTTGGTGCAGAAGTAGG+TGG 0.603408 3_4:-41195073 None:intergenic
GTGGGTAGCAGCGTTGCCAA+GGG 0.603465 3_4:+41192715 Msa0500660:CDS
CAGAAGGTTCAAGTATGCAA+CGG 0.604075 3_4:-41193457 None:intergenic
GACTCCCATTATTACATCGG+GGG 0.606915 3_4:+41195720 Msa0500660:CDS
CAAAGGAAAGGTCCATCCCA+GGG 0.607760 3_4:-41195444 None:intergenic
TCATCTCTGTTGAGATCAGG+AGG 0.608530 3_4:-41192692 None:intergenic
TACTATTGCATAATACAACA+AGG 0.609547 3_4:-41196022 None:intergenic
ATGGTCCTTGATTGTTGTCG+TGG 0.610413 3_4:+41194832 Msa0500660:CDS
TGGAATGCTCAACAGGATGT+CGG 0.611135 3_4:+41195914 Msa0500660:three_prime_UTR
GCCTGCACTGCGCATACAAG+TGG 0.614389 3_4:-41196201 None:intergenic
TATCAGCAGTGATGGAGTCT+GGG 0.616566 3_4:+41194792 Msa0500660:CDS
ATAGTCAGGAATAATAACCT+GGG 0.617389 3_4:+41196152 Msa0500660:three_prime_UTR
CTGATCTCAACAGAGATGAG+TGG 0.619687 3_4:+41192696 Msa0500660:CDS
CGTTGAGCCAGATATGGTAC+GGG 0.620610 3_4:+41195177 Msa0500660:CDS
ACCATATGTAAAGCAAGTGA+AGG 0.621718 3_4:+41194266 Msa0500660:CDS
ATACAGCTTTCCAATGCTGG+AGG 0.622202 3_4:+41194760 Msa0500660:intron
GGAGGGTATTTCAGTACATG+AGG 0.623571 3_4:+41195395 Msa0500660:CDS
GGTCGGCTAAATACAGGCGG+AGG 0.624068 3_4:+41193662 Msa0500660:CDS
AAATACAGGCGGAGGTGCAG+AGG 0.629751 3_4:+41193670 Msa0500660:CDS
CTTGTCAGCAGATCATCGAC+TGG 0.635215 3_4:+41193496 Msa0500660:CDS
GTGCGCATCACTTCTAGTGG+GGG 0.635281 3_4:+41193632 Msa0500660:CDS
ACTCTTGTAGAAATAACCCC+AGG 0.637035 3_4:-41196169 None:intergenic
GAAGTAGGTGGTTTCTCCTG+GGG 0.638132 3_4:-41195061 None:intergenic
GGTGCGCATCACTTCTAGTG+GGG 0.638228 3_4:+41193631 Msa0500660:CDS
GTCAAGTAGAGATTAAACCT+GGG 0.644282 3_4:+41195373 Msa0500660:CDS
GAATATGAACCACCCAAGAG+TGG 0.645393 3_4:+41195871 Msa0500660:three_prime_UTR
TGATTGTTGTCGTGGCATGT+CGG 0.646140 3_4:+41194840 Msa0500660:CDS
TGCGCATACAAGTGGCAGTG+TGG 0.654439 3_4:-41196193 None:intergenic
GTACGGGAACTATACGAGGA+AGG 0.659927 3_4:+41195193 Msa0500660:CDS
CCGTTGAGATGTTGGCCTGG+TGG 0.663273 3_4:+41194186 Msa0500660:CDS
AACCACCCAAGAGTGGCGAA+AGG 0.663603 3_4:+41195878 Msa0500660:three_prime_UTR
CCACCAGGCCAACATCTCAA+CGG 0.675490 3_4:-41194186 None:intergenic
TCAAGTAGAGATTAAACCTG+GGG 0.678261 3_4:+41195374 Msa0500660:CDS
TGTCAAAGAGTCGTTTGTGA+TGG 0.680422 3_4:+41191687 Msa0500660:CDS
AACTTGAACATGTTGCAGAG+TGG 0.681139 3_4:-41195333 None:intergenic
GAGGGTATTTCAGTACATGA+GGG 0.690141 3_4:+41195396 Msa0500660:CDS
TGACTCCCATTATTACATCG+GGG 0.695633 3_4:+41195719 Msa0500660:CDS
ACTATTGCATAATACAACAA+GGG 0.697633 3_4:-41196021 None:intergenic
CCATCCTTCTATAATCACGA+AGG 0.697805 3_4:-41193405 None:intergenic
GTTGGTCGGCTAAATACAGG+CGG 0.700243 3_4:+41193659 Msa0500660:CDS
AACATACGAAGATGACTCAG+AGG 0.704568 3_4:-41195143 None:intergenic
TAGTCAGGAATAATAACCTG+GGG 0.711673 3_4:+41196153 Msa0500660:three_prime_UTR
AATGCTCAACAGGATGTCGG+AGG 0.712144 3_4:+41195917 Msa0500660:three_prime_UTR
TTGTTGTCGTGGCATGTCGG+CGG 0.717945 3_4:+41194843 Msa0500660:CDS
TATGGTACGGGAACTATACG+AGG 0.726277 3_4:+41195189 Msa0500660:CDS
AGATGACACAACCTGCATCG+TGG 0.745057 3_4:+41195027 Msa0500660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAATTCTAATTTGA+TGG + chr3_4:41191767-41191786 Msa0500660:intron 10.0%
!! TAAATTAAATTACTTGAAGA+TGG - chr3_4:41191343-41191362 None:intergenic 15.0%
!!! ATATTGTATTTTTCTTTACT+TGG + chr3_4:41192538-41192557 Msa0500660:intron 15.0%
!!! TAGAGTTAGTTTTATTTTTT+TGG + chr3_4:41193188-41193207 Msa0500660:intron 15.0%
!!! TCTATTTTTTTTTCTTCTTA+AGG + chr3_4:41193319-41193338 Msa0500660:intron 15.0%
!! AAAAGAAATAGTATTAATAG+AGG - chr3_4:41193842-41193861 None:intergenic 15.0%
!! ATAGATTCAAAAGTAAAATT+AGG + chr3_4:41193895-41193914 Msa0500660:intron 15.0%
!!! GATTCATTAATACTTTTTTT+AGG + chr3_4:41194101-41194120 Msa0500660:intron 15.0%
!! AATATAAAACTAAACTTAAG+TGG - chr3_4:41194367-41194386 None:intergenic 15.0%
!!! TGTATTTTTAAGTCATTTAT+AGG + chr3_4:41194642-41194661 Msa0500660:intron 15.0%
!! AATTAGAACAATTAACAAAT+AGG - chr3_4:41194715-41194734 None:intergenic 15.0%
!!! TTTCTACATATTCTGTTTTT+GGG + chr3_4:41191712-41191731 Msa0500660:CDS 20.0%
!! CATCAAATATTTATGTGATT+TGG + chr3_4:41191962-41191981 Msa0500660:intron 20.0%
!!! TTTTACTTATTATTTTGGTG+TGG + chr3_4:41192017-41192036 Msa0500660:intron 20.0%
!! ATCAAGAAAAGTAAATGATT+GGG + chr3_4:41192047-41192066 Msa0500660:intron 20.0%
!!! ATTCAATTTGCTAAACTATT+TGG - chr3_4:41192350-41192369 None:intergenic 20.0%
!! TTTAGCAAATTGAATATACA+CGG + chr3_4:41192355-41192374 Msa0500660:intron 20.0%
!! CTTCATAACCAAATATTTAA+TGG - chr3_4:41192822-41192841 None:intergenic 20.0%
!!! ATTTTTTTACTCTGAGAATT+GGG - chr3_4:41192916-41192935 None:intergenic 20.0%
!!! AATTTTTTTACTCTGAGAAT+TGG - chr3_4:41192917-41192936 None:intergenic 20.0%
!! AGGTTAGAAAAATATTATTG+AGG - chr3_4:41192999-41193018 None:intergenic 20.0%
!!! AATATTTTTCTAACCTCTTT+TGG + chr3_4:41193003-41193022 Msa0500660:intron 20.0%
!! AATAAAACTAACTCTACTAT+AGG - chr3_4:41193184-41193203 None:intergenic 20.0%
!! AAAAATGGATAACAGTTTAA+AGG - chr3_4:41193703-41193722 None:intergenic 20.0%
!!! GGTTTTTGTTGTATTTTATT+GGG - chr3_4:41193771-41193790 None:intergenic 20.0%
!!! TGGTTTTTGTTGTATTTTAT+TGG - chr3_4:41193772-41193791 None:intergenic 20.0%
!!! ACTACGTTAATGATTTTTAT+AGG + chr3_4:41194158-41194177 Msa0500660:intron 20.0%
!!! TAGTATTTTTGGAAAACAAA+AGG - chr3_4:41194532-41194551 None:intergenic 20.0%
!! ACTAATTGATGAAACAAAAA+TGG + chr3_4:41194570-41194589 Msa0500660:intron 20.0%
!!! CAAAAATGGAAGTATTTTAA+TGG + chr3_4:41194584-41194603 Msa0500660:intron 20.0%
!!! TTATATTCCTTTTTTGTTTC+TGG + chr3_4:41195956-41195975 Msa0500660:three_prime_UTR 20.0%
!!! TGATTTGTTTCCTGATTTTT+AGG + chr3_4:41191435-41191454 Msa0500660:intron 25.0%
! TTGTTGAAATCCTAAAAATC+AGG - chr3_4:41191448-41191467 None:intergenic 25.0%
!! GTTTCTACATATTCTGTTTT+TGG + chr3_4:41191711-41191730 Msa0500660:CDS 25.0%
!!! TTCTACATATTCTGTTTTTG+GGG + chr3_4:41191713-41191732 Msa0500660:CDS 25.0%
!! CAAATATTTATGTGATTTGG+AGG + chr3_4:41191965-41191984 Msa0500660:intron 25.0%
! GATCAAGAAAAGTAAATGAT+TGG + chr3_4:41192046-41192065 Msa0500660:intron 25.0%
! TTGAAGTTTCAACAATATCA+CGG - chr3_4:41192139-41192158 None:intergenic 25.0%
!!! TAAACTATTTGGTGTATCTT+TGG - chr3_4:41192339-41192358 None:intergenic 25.0%
! TATGCATTCGTTGTATAAAA+AGG - chr3_4:41192503-41192522 None:intergenic 25.0%
! GAAAATTTACAGCTATTTGA+CGG + chr3_4:41192602-41192621 Msa0500660:intron 25.0%
!! AATCTTCTGAACAATGTTTT+AGG + chr3_4:41192662-41192681 Msa0500660:CDS 25.0%
!! GATAAAGATTTTCAACAGAA+AGG + chr3_4:41192764-41192783 Msa0500660:CDS 25.0%
! CATAACCAAATATTTAATGG+AGG - chr3_4:41192819-41192838 None:intergenic 25.0%
! AACAGATAAAAAAAAGACCA+GGG - chr3_4:41193043-41193062 None:intergenic 25.0%
! AAACAGATAAAAAAAAGACC+AGG - chr3_4:41193044-41193063 None:intergenic 25.0%
! TATTGTGTAGATATTGTTAC+TGG + chr3_4:41193213-41193232 Msa0500660:intron 25.0%
! ATTGTGTAGATATTGTTACT+GGG + chr3_4:41193214-41193233 Msa0500660:intron 25.0%
! AATAGAAAAATCATGAACTG+AGG - chr3_4:41193305-41193324 None:intergenic 25.0%
!! AAGAAGAGTAAGTTTTTACT+GGG + chr3_4:41193528-41193547 Msa0500660:intron 25.0%
!!! TTATCCATTTTTATCTCTGA+TGG + chr3_4:41193711-41193730 Msa0500660:intron 25.0%
! AATACCATCAGAGATAAAAA+TGG - chr3_4:41193718-41193737 None:intergenic 25.0%
!!! CAATGATTTGTTGTTTTTAG+TGG - chr3_4:41193798-41193817 None:intergenic 25.0%
! CACTAAAAACAACAAATCAT+TGG + chr3_4:41193796-41193815 Msa0500660:intron 25.0%
! AAATTAGGTCAATCATATCA+TGG + chr3_4:41193910-41193929 Msa0500660:intron 25.0%
! AATTAGGTCAATCATATCAT+GGG + chr3_4:41193911-41193930 Msa0500660:intron 25.0%
!! CGTTAATGATTTTTATAGGT+TGG + chr3_4:41194162-41194181 Msa0500660:intron 25.0%
! AAACTAAACTTAAGTGGATA+CGG - chr3_4:41194361-41194380 None:intergenic 25.0%
!! ATTTTCATAAGATTAACTGC+TGG + chr3_4:41194461-41194480 Msa0500660:intron 25.0%
!! GGCAAAATCATTAGTATTTT+TGG - chr3_4:41194543-41194562 None:intergenic 25.0%
! TTTCATCAATTAGTGTTCAA+GGG - chr3_4:41194564-41194583 None:intergenic 25.0%
! AATGGAAAACAAAGTAGTTA+TGG + chr3_4:41194602-41194621 Msa0500660:intron 25.0%
! AAGTTAACAAATGAGTAACA+AGG - chr3_4:41194944-41194963 None:intergenic 25.0%
! ATCTGAAAGCAATATATTGA+AGG - chr3_4:41195596-41195615 None:intergenic 25.0%
! AAATCTTCTGATTGTTCATA+TGG + chr3_4:41195768-41195787 Msa0500660:exon 25.0%
! TAGATCTGTTCATTTGTATA+TGG + chr3_4:41195982-41196001 Msa0500660:three_prime_UTR 25.0%
! AGATCTGTTCATTTGTATAT+GGG + chr3_4:41195983-41196002 Msa0500660:three_prime_UTR 25.0%
! ACTATTGCATAATACAACAA+GGG - chr3_4:41196024-41196043 None:intergenic 25.0%
! TACTATTGCATAATACAACA+AGG - chr3_4:41196025-41196044 None:intergenic 25.0%
! ATATTCAGAAGATTCAATGT+AGG - chr3_4:41196055-41196074 None:intergenic 25.0%
TGTTGTGTTTGAAGAAATTG+AGG + chr3_4:41191503-41191522 Msa0500660:CDS 30.0%
GTTGTGTTTGAAGAAATTGA+GGG + chr3_4:41191504-41191523 Msa0500660:CDS 30.0%
! CTTAACTATGTTGTGCATTT+TGG + chr3_4:41192080-41192099 Msa0500660:intron 30.0%
! TTTTGGATTGACTGTGAATT+TGG + chr3_4:41192097-41192116 Msa0500660:intron 30.0%
!!! AGTTTTGTTGCTAAAGTCAA+AGG + chr3_4:41192164-41192183 Msa0500660:intron 30.0%
!! GTTTTGTTGCTAAAGTCAAA+GGG + chr3_4:41192165-41192184 Msa0500660:intron 30.0%
! TTTTGTTGCTAAAGTCAAAG+GGG + chr3_4:41192166-41192185 Msa0500660:intron 30.0%
GCAAAGTCAACCAAAAAAAA+AGG - chr3_4:41192255-41192274 None:intergenic 30.0%
AAACAAAACCATTGCTTTGA+GGG - chr3_4:41192437-41192456 None:intergenic 30.0%
AAAACAAAACCATTGCTTTG+AGG - chr3_4:41192438-41192457 None:intergenic 30.0%
! AGATTTTCAACAGAAAGGTA+TGG + chr3_4:41192769-41192788 Msa0500660:intron 30.0%
TCTTGCCTCCATTAAATATT+TGG + chr3_4:41192811-41192830 Msa0500660:intron 30.0%
ATTCATATGAAGATTCCAGA+TGG - chr3_4:41192859-41192878 None:intergenic 30.0%
AGAACAATGAGACAAAAAAC+AGG + chr3_4:41192939-41192958 Msa0500660:intron 30.0%
! GCAGTTATTAAATTTTCTGC+AGG + chr3_4:41193090-41193109 Msa0500660:intron 30.0%
ACTAACTCTACTATAGGTAT+GGG - chr3_4:41193178-41193197 None:intergenic 30.0%
AACTAACTCTACTATAGGTA+TGG - chr3_4:41193179-41193198 None:intergenic 30.0%
TTGTGTAGATATTGTTACTG+GGG + chr3_4:41193215-41193234 Msa0500660:intron 30.0%
! GAAGAAGAGTAAGTTTTTAC+TGG + chr3_4:41193527-41193546 Msa0500660:intron 30.0%
! TCGTTTCATTTTCTTTCATC+AGG + chr3_4:41193606-41193625 Msa0500660:intron 30.0%
! TTTCATTTTCTTTCATCAGG+AGG + chr3_4:41193609-41193628 Msa0500660:intron 30.0%
! TTCATTTTCTTTCATCAGGA+GGG + chr3_4:41193610-41193629 Msa0500660:intron 30.0%
!! ATGGTATTGACTACCTAAAA+AGG + chr3_4:41193730-41193749 Msa0500660:intron 30.0%
! ATGAGTCTTTAAGCCTTTTT+AGG - chr3_4:41193746-41193765 None:intergenic 30.0%
!!! TTTGTTGTTTTTAGTGGTAG+TGG - chr3_4:41193792-41193811 None:intergenic 30.0%
ATTAGGTCAATCATATCATG+GGG + chr3_4:41193912-41193931 Msa0500660:intron 30.0%
!! CTTAAAAGTACTCATGACAT+AGG + chr3_4:41193984-41194003 Msa0500660:intron 30.0%
AACTAAACTTAAGTGGATAC+GGG - chr3_4:41194360-41194379 None:intergenic 30.0%
GTTTCATCAATTAGTGTTCA+AGG - chr3_4:41194565-41194584 None:intergenic 30.0%
GTGAATTTCATAAGGGATAA+TGG - chr3_4:41194688-41194707 None:intergenic 30.0%
! AGGTCTTGTGAATTTCATAA+GGG - chr3_4:41194695-41194714 None:intergenic 30.0%
! TAGGTCTTGTGAATTTCATA+AGG - chr3_4:41194696-41194715 None:intergenic 30.0%
! GAGCATACTTTTACAATATG+TGG - chr3_4:41194880-41194899 None:intergenic 30.0%
GAAAGCAATATATTGAAGGA+GGG - chr3_4:41195592-41195611 None:intergenic 30.0%
TGAAAGCAATATATTGAAGG+AGG - chr3_4:41195593-41195612 None:intergenic 30.0%
TCTACATCCAGAAACAAAAA+AGG - chr3_4:41195966-41195985 None:intergenic 30.0%
ATTTGTATATGGGTCTTGAA+TGG + chr3_4:41195993-41196012 Msa0500660:three_prime_UTR 30.0%
ATAGTCAGGAATAATAACCT+GGG + chr3_4:41196152-41196171 Msa0500660:three_prime_UTR 30.0%
GTTGAGATACGTTGAAATGT+CGG - chr3_4:41191294-41191313 None:intergenic 35.0%
TTGCGTGAGGATTAAATTGA+AGG + chr3_4:41191477-41191496 Msa0500660:intron 35.0%
GAAAATCGAGAAACCTGATA+TGG + chr3_4:41191599-41191618 Msa0500660:CDS 35.0%
CCATAAACAACAACCATATC+AGG - chr3_4:41191615-41191634 None:intergenic 35.0%
!! CCTGATATGGTTGTTGTTTA+TGG + chr3_4:41191612-41191631 Msa0500660:CDS 35.0%
AATGCTAGCGAGAATAAGAA+AGG + chr3_4:41191636-41191655 Msa0500660:CDS 35.0%
ACAAACGACTCTTTGACATT+CGG - chr3_4:41191685-41191704 None:intergenic 35.0%
! TGACTGTGAATTTGGTGAAA+TGG + chr3_4:41192105-41192124 Msa0500660:intron 35.0%
!! TGTATCTTTGGAATCACAGT+GGG - chr3_4:41192327-41192346 None:intergenic 35.0%
AGCAAATTGAATATACACGG+AGG + chr3_4:41192358-41192377 Msa0500660:intron 35.0%
CAGAAAATGCAAATGCAACA+TGG - chr3_4:41192577-41192596 None:intergenic 35.0%
ATTGTTCAGAAGATTCTCCT+TGG - chr3_4:41192657-41192676 None:intergenic 35.0%
GCAATTTCATAATCTCCATC+TGG + chr3_4:41192841-41192860 Msa0500660:intron 35.0%
! TGAGACAAAAAACAGGTTGA+TGG + chr3_4:41192946-41192965 Msa0500660:intron 35.0%
TGTCTAATGTACATAGAGCA+TGG + chr3_4:41193126-41193145 Msa0500660:intron 35.0%
GTAACCTTCGTGATTATAGA+AGG + chr3_4:41193401-41193420 Msa0500660:CDS 35.0%
CTTCGTGATTATAGAAGGAT+GGG + chr3_4:41193406-41193425 Msa0500660:CDS 35.0%
GAGACTTTACTGCAATGTAA+TGG - chr3_4:41193585-41193604 None:intergenic 35.0%
!! AAATCATTGGCTTGTCGAAT+GGG + chr3_4:41193809-41193828 Msa0500660:intron 35.0%
CTTGCTTTACATATGGTACA+GGG - chr3_4:41194263-41194282 None:intergenic 35.0%
ACTTGCTTTACATATGGTAC+AGG - chr3_4:41194264-41194283 None:intergenic 35.0%
ACCATATGTAAAGCAAGTGA+AGG + chr3_4:41194266-41194285 Msa0500660:CDS 35.0%
ACCTTCACTTGCTTTACATA+TGG - chr3_4:41194270-41194289 None:intergenic 35.0%
TATGTAAAGCAAGTGAAGGT+TGG + chr3_4:41194270-41194289 Msa0500660:intron 35.0%
!! TCTAATTCATTTTTCCCCTC+TGG + chr3_4:41194728-41194747 Msa0500660:intron 35.0%
TGTATAAATAGAAGCCAGAG+GGG - chr3_4:41194745-41194764 None:intergenic 35.0%
CTGTATAAATAGAAGCCAGA+GGG - chr3_4:41194746-41194765 None:intergenic 35.0%
TTTATACAGCTTTCCAATGC+TGG + chr3_4:41194757-41194776 Msa0500660:intron 35.0%
AAGATTCCTGAAGAAAGCAA+AGG - chr3_4:41194988-41195007 None:intergenic 35.0%
!!! TTTACCGGTTTCTTTTGTGT+TGG - chr3_4:41195091-41195110 None:intergenic 35.0%
ACACAAAAGAAACCGGTAAA+AGG + chr3_4:41195091-41195110 Msa0500660:CDS 35.0%
TGTCAAGTAGAGATTAAACC+TGG + chr3_4:41195372-41195391 Msa0500660:CDS 35.0%
GTCAAGTAGAGATTAAACCT+GGG + chr3_4:41195373-41195392 Msa0500660:CDS 35.0%
TCAAGTAGAGATTAAACCTG+GGG + chr3_4:41195374-41195393 Msa0500660:CDS 35.0%
! TCTTTTGGCAACTTAAGCAA+AGG - chr3_4:41195464-41195483 None:intergenic 35.0%
AACTCGAGAATCAACATCAA+TGG - chr3_4:41195548-41195567 None:intergenic 35.0%
TGAAGGAGGGAAATAGATTA+TGG - chr3_4:41195579-41195598 None:intergenic 35.0%
TGTGACTCCCATTATTACAT+CGG + chr3_4:41195717-41195736 Msa0500660:CDS 35.0%
! GTTTTCCAATGCTTCATAAC+AGG + chr3_4:41195799-41195818 Msa0500660:three_prime_UTR 35.0%
TAACAGTAGCATTCTGTTAG+AGG + chr3_4:41195826-41195845 Msa0500660:three_prime_UTR 35.0%
CGAAAGGTTCTGTAAAAAGA+TGG + chr3_4:41195894-41195913 Msa0500660:three_prime_UTR 35.0%
AAAAAGATGGAATGCTCAAC+AGG + chr3_4:41195907-41195926 Msa0500660:three_prime_UTR 35.0%
CAGGTTATTATTCCTGACTA+TGG - chr3_4:41196153-41196172 None:intergenic 35.0%
CATAGTCAGGAATAATAACC+TGG + chr3_4:41196151-41196170 Msa0500660:three_prime_UTR 35.0%
TAGTCAGGAATAATAACCTG+GGG + chr3_4:41196153-41196172 Msa0500660:three_prime_UTR 35.0%
!! AAAGACGCATAGTTTGTTGT+TGG - chr3_4:41196228-41196247 None:intergenic 35.0%
! TGCAAGTTTTGCAGAACAAC+AGG + chr3_4:41191266-41191285 Msa0500660:intron 40.0%
GAAATTGAGGGAACAATGTC+TGG + chr3_4:41191516-41191535 Msa0500660:CDS 40.0%
TGTCAAAGAGTCGTTTGTGA+TGG + chr3_4:41191687-41191706 Msa0500660:CDS 40.0%
!!! CTTTTGATGGAAAGCACTCT+TGG + chr3_4:41191817-41191836 Msa0500660:intron 40.0%
TCAAGTGTCTGTTACCAACA+CGG + chr3_4:41191842-41191861 Msa0500660:intron 40.0%
! TTTACTAGTGTCGAGTTGTC+AGG + chr3_4:41191895-41191914 Msa0500660:intron 40.0%
! TTACTAGTGTCGAGTTGTCA+GGG + chr3_4:41191896-41191915 Msa0500660:intron 40.0%
! CTGTGAATTTGGTGAAATGG+CGG + chr3_4:41192108-41192127 Msa0500660:intron 40.0%
!! AGCTCAATAATGGGCTTGTT+TGG - chr3_4:41192224-41192243 None:intergenic 40.0%
ACAAGCCCATTATTGAGCTA+CGG + chr3_4:41192225-41192244 Msa0500660:intron 40.0%
CTTTGCAAAAGCGAACACTT+TGG + chr3_4:41192269-41192288 Msa0500660:intron 40.0%
! CAGTGGGTTTGATAAAGTCA+GGG - chr3_4:41192311-41192330 None:intergenic 40.0%
! ACAGTGGGTTTGATAAAGTC+AGG - chr3_4:41192312-41192331 None:intergenic 40.0%
!! GTGTATCTTTGGAATCACAG+TGG - chr3_4:41192328-41192347 None:intergenic 40.0%
!! AAAACCATTGCTTTGAGGGT+GGG - chr3_4:41192433-41192452 None:intergenic 40.0%
! GTGTATCTGAAAGCATAGTG+TGG + chr3_4:41192477-41192496 Msa0500660:intron 40.0%
TGATCTCAACAGAGATGAGT+GGG + chr3_4:41192697-41192716 Msa0500660:CDS 40.0%
! TTGATGGATACAGAACACGA+TGG + chr3_4:41192962-41192981 Msa0500660:intron 40.0%
GGTACAAGAATCATCAGTCA+TGG - chr3_4:41193284-41193303 None:intergenic 40.0%
CATATGCACAGCACAAACAT+CGG + chr3_4:41193370-41193389 Msa0500660:intron 40.0%
ATATGCACAGCACAAACATC+GGG + chr3_4:41193371-41193390 Msa0500660:intron 40.0%
CCATCCTTCTATAATCACGA+AGG - chr3_4:41193408-41193427 None:intergenic 40.0%
CCTTCGTGATTATAGAAGGA+TGG + chr3_4:41193405-41193424 Msa0500660:CDS 40.0%
GTTGTAACAGTTGCATCAGT+TGG + chr3_4:41193428-41193447 Msa0500660:CDS 40.0%
AGAAGGTTCAAGTATGCAAC+GGG - chr3_4:41193459-41193478 None:intergenic 40.0%
CAGAAGGTTCAAGTATGCAA+CGG - chr3_4:41193460-41193479 None:intergenic 40.0%
TTGCATACTTGAACCTTCTG+AGG + chr3_4:41193460-41193479 Msa0500660:CDS 40.0%
TGCATACTTGAACCTTCTGA+GGG + chr3_4:41193461-41193480 Msa0500660:CDS 40.0%
!! CAAATCATTGGCTTGTCGAA+TGG + chr3_4:41193808-41193827 Msa0500660:intron 40.0%
! TCCATTGGTGATATGGATGT+TGG + chr3_4:41194225-41194244 Msa0500660:CDS 40.0%
ACCAACATCCATATCACCAA+TGG - chr3_4:41194229-41194248 None:intergenic 40.0%
CAATATTGCTGCATGTGCAA+AGG - chr3_4:41194306-41194325 None:intergenic 40.0%
CTGCAGCAATAAAGCAACAA+AGG - chr3_4:41194507-41194526 None:intergenic 40.0%
!! CTTTGTTGCTTTATTGCTGC+AGG + chr3_4:41194505-41194524 Msa0500660:intron 40.0%
GCTGTATAAATAGAAGCCAG+AGG - chr3_4:41194747-41194766 None:intergenic 40.0%
!! AGACTTGTTATCAGCAGTGA+TGG + chr3_4:41194784-41194803 Msa0500660:CDS 40.0%
TCATGTCCTTTGCTTTCTTC+AGG + chr3_4:41194979-41194998 Msa0500660:intron 40.0%
TCAGGAATCTTTGCAAGCAA+AGG + chr3_4:41194997-41195016 Msa0500660:intron 40.0%
CAGGAATCTTTGCAAGCAAA+GGG + chr3_4:41194998-41195017 Msa0500660:intron 40.0%
TAATATATCGACCACGATGC+AGG - chr3_4:41195041-41195060 None:intergenic 40.0%
!! TTTTGTGTTGGTGCAGAAGT+AGG - chr3_4:41195079-41195098 None:intergenic 40.0%
TGCACCAACACAAAAGAAAC+CGG + chr3_4:41195084-41195103 Msa0500660:CDS 40.0%
ACCGGTAAAAGGAATGTTGA+AGG + chr3_4:41195102-41195121 Msa0500660:CDS 40.0%
! GCCTTCAACATTCCTTTTAC+CGG - chr3_4:41195106-41195125 None:intergenic 40.0%
! AGAGGACTTTTTGCGGAAAA+TGG - chr3_4:41195128-41195147 None:intergenic 40.0%
! ATGACTCAGAGGACTTTTTG+CGG - chr3_4:41195135-41195154 None:intergenic 40.0%
AACATACGAAGATGACTCAG+AGG - chr3_4:41195146-41195165 None:intergenic 40.0%
AGAATACGTTGAGCCAGATA+TGG + chr3_4:41195171-41195190 Msa0500660:CDS 40.0%
TATAGTTCCCGTACCATATC+TGG - chr3_4:41195187-41195206 None:intergenic 40.0%
! ACCAAACCTTTCTGAAAGCA+AGG - chr3_4:41195224-41195243 None:intergenic 40.0%
! TTTGCAGCTTGTTCTCTAGT+TGG + chr3_4:41195257-41195276 Msa0500660:intron 40.0%
AACATCTTTGTCTGAACTGC+AGG + chr3_4:41195295-41195314 Msa0500660:intron 40.0%
AACTTGAACATGTTGCAGAG+TGG - chr3_4:41195336-41195355 None:intergenic 40.0%
!! GAGGGTATTTCAGTACATGA+GGG + chr3_4:41195396-41195415 Msa0500660:CDS 40.0%
TGGCAACTTAAGCAAAGGAA+AGG - chr3_4:41195459-41195478 None:intergenic 40.0%
! CCATGGCTTCTTTCTTCTTT+TGG - chr3_4:41195479-41195498 None:intergenic 40.0%
CCAAAAGAAGAAAGAAGCCA+TGG + chr3_4:41195476-41195495 Msa0500660:CDS 40.0%
AAGAAGAAAGAAGCCATGGA+AGG + chr3_4:41195480-41195499 Msa0500660:CDS 40.0%
AGAAGAAAGAAGCCATGGAA+GGG + chr3_4:41195481-41195500 Msa0500660:CDS 40.0%
CTTTCAGATAGACGTAGCAA+TGG + chr3_4:41195607-41195626 Msa0500660:intron 40.0%
GTGACTCCCATTATTACATC+GGG + chr3_4:41195718-41195737 Msa0500660:CDS 40.0%
TGACTCCCATTATTACATCG+GGG + chr3_4:41195719-41195738 Msa0500660:CDS 40.0%
GAAACCCCCGATGTAATAAT+GGG - chr3_4:41195727-41195746 None:intergenic 40.0%
AGAAACCCCCGATGTAATAA+TGG - chr3_4:41195728-41195747 None:intergenic 40.0%
AGTCTCCTGTTATGAAGCAT+TGG - chr3_4:41195807-41195826 None:intergenic 40.0%
GTTAGAGGATTTCTGTGACT+TGG + chr3_4:41195841-41195860 Msa0500660:three_prime_UTR 40.0%
CATCTGTTTGATCCATAGTC+AGG + chr3_4:41196138-41196157 Msa0500660:three_prime_UTR 40.0%
ACTCTTGTAGAAATAACCCC+AGG - chr3_4:41196172-41196191 None:intergenic 40.0%
ACTTGCATCGTAGAGAGAGA+TGG - chr3_4:41191253-41191272 None:intergenic 45.0%
AGATGGAAGAAAACGCGATC+AGG - chr3_4:41191326-41191345 None:intergenic 45.0%
ACAAAGCAATCTCTTGCGTG+AGG + chr3_4:41191464-41191483 Msa0500660:intron 45.0%
TTGAGGGAACAATGTCTGGT+CGG + chr3_4:41191520-41191539 Msa0500660:CDS 45.0%
ACATCATTCGGTTCCCCTTT+CGG + chr3_4:41191548-41191567 Msa0500660:CDS 45.0%
!!! AGCACTGACGACACTTTTGA+TGG + chr3_4:41191804-41191823 Msa0500660:intron 45.0%
GTAATCATGTGTGTCCGTGT+TGG - chr3_4:41191859-41191878 None:intergenic 45.0%
GTTTGGACTGACGATGAGTT+TGG - chr3_4:41192207-41192226 None:intergenic 45.0%
CAAGCCCATTATTGAGCTAC+GGG + chr3_4:41192226-41192245 Msa0500660:intron 45.0%
!!! CTACGGGCGACCTTTTTTTT+TGG + chr3_4:41192242-41192261 Msa0500660:intron 45.0%
ATACACGGAGGAACATATCG+CGG + chr3_4:41192370-41192389 Msa0500660:intron 45.0%
!! AAACCATTGCTTTGAGGGTG+GGG - chr3_4:41192432-41192451 None:intergenic 45.0%
!! CAAAACCATTGCTTTGAGGG+TGG - chr3_4:41192434-41192453 None:intergenic 45.0%
! CAGCTATTTGACGGACACAA+TGG + chr3_4:41192611-41192630 Msa0500660:intron 45.0%
TGCTGCTGCAATTTATGCCA+AGG + chr3_4:41192637-41192656 Msa0500660:CDS 45.0%
TCTGTTGAGATCAGGAGGAA+TGG - chr3_4:41192690-41192709 None:intergenic 45.0%
TCATCTCTGTTGAGATCAGG+AGG - chr3_4:41192695-41192714 None:intergenic 45.0%
CACTCATCTCTGTTGAGATC+AGG - chr3_4:41192698-41192717 None:intergenic 45.0%
CTGATCTCAACAGAGATGAG+TGG + chr3_4:41192696-41192715 Msa0500660:CDS 45.0%
GTGTAGCAGTGTACCAAAAG+AGG - chr3_4:41193019-41193038 None:intergenic 45.0%
AGAATCATCAGTCATGGCTC+AGG - chr3_4:41193278-41193297 None:intergenic 45.0%
! ATACTTGAACCTTCTGAGGG+CGG + chr3_4:41193464-41193483 Msa0500660:CDS 45.0%
! GAAGTTGGTCGGCTAAATAC+AGG + chr3_4:41193656-41193675 Msa0500660:CDS 45.0%
TTGTGTCTCTCTCGATCCAT+TGG + chr3_4:41194210-41194229 Msa0500660:CDS 45.0%
! CTCTCGATCCATTGGTGATA+TGG + chr3_4:41194218-41194237 Msa0500660:CDS 45.0%
ATACAGCTTTCCAATGCTGG+AGG + chr3_4:41194760-41194779 Msa0500660:intron 45.0%
AACAAGTCTTCCTCCAGCAT+TGG - chr3_4:41194773-41194792 None:intergenic 45.0%
! TTATCAGCAGTGATGGAGTC+TGG + chr3_4:41194791-41194810 Msa0500660:CDS 45.0%
! TATCAGCAGTGATGGAGTCT+GGG + chr3_4:41194792-41194811 Msa0500660:CDS 45.0%
GGATGCTCTAACTGCAGAAA+TGG + chr3_4:41194813-41194832 Msa0500660:CDS 45.0%
ATGGTCCTTGATTGTTGTCG+TGG + chr3_4:41194832-41194851 Msa0500660:CDS 45.0%
ACATGCCACGACAACAATCA+AGG - chr3_4:41194840-41194859 None:intergenic 45.0%
TGATTGTTGTCGTGGCATGT+CGG + chr3_4:41194840-41194859 Msa0500660:CDS 45.0%
AGAAGTAGGTGGTTTCTCCT+GGG - chr3_4:41195065-41195084 None:intergenic 45.0%
ACGTTGAGCCAGATATGGTA+CGG + chr3_4:41195176-41195195 Msa0500660:CDS 45.0%
TATGGTACGGGAACTATACG+AGG + chr3_4:41195189-41195208 Msa0500660:CDS 45.0%
GATCTGCCTTGCTTTCAGAA+AGG + chr3_4:41195215-41195234 Msa0500660:CDS 45.0%
GCCTTGCTTTCAGAAAGGTT+TGG + chr3_4:41195220-41195239 Msa0500660:intron 45.0%
! TCTAGTTGGCTCTCTTGACA+TGG + chr3_4:41195271-41195290 Msa0500660:intron 45.0%
AGTAGAGATTAAACCTGGGG+AGG + chr3_4:41195377-41195396 Msa0500660:CDS 45.0%
GTAGAGATTAAACCTGGGGA+GGG + chr3_4:41195378-41195397 Msa0500660:CDS 45.0%
!! GGAGGGTATTTCAGTACATG+AGG + chr3_4:41195395-41195414 Msa0500660:CDS 45.0%
AAGAAGCCATGGAAGGGAAA+CGG + chr3_4:41195487-41195506 Msa0500660:CDS 45.0%
TGATATCCGTTTCCCTTCCA+TGG - chr3_4:41195496-41195515 None:intergenic 45.0%
ATGGAAGGGAAACGGATATC+AGG + chr3_4:41195495-41195514 Msa0500660:CDS 45.0%
GACTCCCATTATTACATCGG+GGG + chr3_4:41195720-41195739 Msa0500660:CDS 45.0%
ATCGGGGGTTTCTCAGAATA+AGG + chr3_4:41195735-41195754 Msa0500660:CDS 45.0%
GAATATGAACCACCCAAGAG+TGG + chr3_4:41195871-41195890 Msa0500660:three_prime_UTR 45.0%
TGGAATGCTCAACAGGATGT+CGG + chr3_4:41195914-41195933 Msa0500660:three_prime_UTR 45.0%
!!! TTTTATTTTACTTATTATTT+TGG + chr3_4:41192012-41192031 Msa0500660:intron 5.0%
TGAGGGAACAATGTCTGGTC+GGG + chr3_4:41191521-41191540 Msa0500660:CDS 50.0%
TGGTCGGGGAGAACATCATT+CGG + chr3_4:41191536-41191555 Msa0500660:CDS 50.0%
! ACGCTTCAACAGCACCGAAA+GGG - chr3_4:41191565-41191584 None:intergenic 50.0%
GTGTCTGGGTGGTGTTTCAT+AGG + chr3_4:41191928-41191947 Msa0500660:intron 50.0%
GTCGCCCGTAGCTCAATAAT+GGG - chr3_4:41192233-41192252 None:intergenic 50.0%
TCGCGGACGTATTTGTGCAA+TGG + chr3_4:41192387-41192406 Msa0500660:intron 50.0%
GTGCAATGGCAAGTACCTTC+TGG + chr3_4:41192401-41192420 Msa0500660:intron 50.0%
! TACTTGAACCTTCTGAGGGC+GGG + chr3_4:41193465-41193484 Msa0500660:CDS 50.0%
CTTGTCAGCAGATCATCGAC+TGG + chr3_4:41193496-41193515 Msa0500660:CDS 50.0%
ACTTCTAGTGGGGGTGAAGT+TGG + chr3_4:41193641-41193660 Msa0500660:CDS 50.0%
GTTGGTCGGCTAAATACAGG+CGG + chr3_4:41193659-41193678 Msa0500660:CDS 50.0%
! AGGTTGGTCCGTTGAGATGT+TGG + chr3_4:41194178-41194197 Msa0500660:intron 50.0%
AGATGACACAACCTGCATCG+TGG + chr3_4:41195027-41195046 Msa0500660:CDS 50.0%
CGTGGTCGATATATTACCCC+AGG + chr3_4:41195045-41195064 Msa0500660:CDS 50.0%
GAAGTAGGTGGTTTCTCCTG+GGG - chr3_4:41195064-41195083 None:intergenic 50.0%
CAGAAGTAGGTGGTTTCTCC+TGG - chr3_4:41195066-41195085 None:intergenic 50.0%
! TGTGTTGGTGCAGAAGTAGG+TGG - chr3_4:41195076-41195095 None:intergenic 50.0%
CGTTGAGCCAGATATGGTAC+GGG + chr3_4:41195177-41195196 Msa0500660:CDS 50.0%
GTACGGGAACTATACGAGGA+AGG + chr3_4:41195193-41195212 Msa0500660:CDS 50.0%
TGTACTGAAATACCCTCCCC+AGG - chr3_4:41195393-41195412 None:intergenic 50.0%
CAAAGGAAAGGTCCATCCCA+GGG - chr3_4:41195447-41195466 None:intergenic 50.0%
CAGAACCTTTCGCCACTCTT+GGG - chr3_4:41195886-41195905 None:intergenic 50.0%
ACAGAACCTTTCGCCACTCT+TGG - chr3_4:41195887-41195906 None:intergenic 50.0%
AATGCTCAACAGGATGTCGG+AGG + chr3_4:41195917-41195936 Msa0500660:three_prime_UTR 50.0%
GAGGGAACAATGTCTGGTCG+GGG + chr3_4:41191522-41191541 Msa0500660:CDS 55.0%
! CGCTTCAACAGCACCGAAAG+GGG - chr3_4:41191564-41191583 None:intergenic 55.0%
! CACGCTTCAACAGCACCGAA+AGG - chr3_4:41191566-41191585 None:intergenic 55.0%
CGAGTTGTCAGGGTTGTGTC+TGG + chr3_4:41191906-41191925 Msa0500660:intron 55.0%
TCAGGGTTGTGTCTGGTGTC+TGG + chr3_4:41191913-41191932 Msa0500660:intron 55.0%
CAGGGTTGTGTCTGGTGTCT+GGG + chr3_4:41191914-41191933 Msa0500660:intron 55.0%
GGTCGCCCGTAGCTCAATAA+TGG - chr3_4:41192234-41192253 None:intergenic 55.0%
!! ATTGCTTTGAGGGTGGGGTG+GGG - chr3_4:41192427-41192446 None:intergenic 55.0%
!! CATTGCTTTGAGGGTGGGGT+GGG - chr3_4:41192428-41192447 None:intergenic 55.0%
! TTGCCAAGGGCTTTGGTTGC+TGG + chr3_4:41192728-41192747 Msa0500660:CDS 55.0%
AAGCCAGCAACCAAAGCCCT+TGG - chr3_4:41192734-41192753 None:intergenic 55.0%
TGGTACACTGCTACACTCCC+TGG + chr3_4:41193023-41193042 Msa0500660:intron 55.0%
TAATGAAGCCCGCCCTCAGA+AGG - chr3_4:41193476-41193495 None:intergenic 55.0%
AGGGTGCGCATCACTTCTAG+TGG + chr3_4:41193629-41193648 Msa0500660:CDS 55.0%
GGGTGCGCATCACTTCTAGT+GGG + chr3_4:41193630-41193649 Msa0500660:CDS 55.0%
GGTGCGCATCACTTCTAGTG+GGG + chr3_4:41193631-41193650 Msa0500660:CDS 55.0%
GTGCGCATCACTTCTAGTGG+GGG + chr3_4:41193632-41193651 Msa0500660:CDS 55.0%
! CTAGTGGGGGTGAAGTTGGT+CGG + chr3_4:41193645-41193664 Msa0500660:CDS 55.0%
! AAATACAGGCGGAGGTGCAG+AGG + chr3_4:41193670-41193689 Msa0500660:CDS 55.0%
CCACCAGGCCAACATCTCAA+CGG - chr3_4:41194189-41194208 None:intergenic 55.0%
TTGTTGTCGTGGCATGTCGG+CGG + chr3_4:41194843-41194862 Msa0500660:CDS 55.0%
! ATGAGGGTGCGCCTAACGTA+AGG + chr3_4:41195412-41195431 Msa0500660:CDS 55.0%
GGACGCGGTTTCCTTACGTT+AGG - chr3_4:41195426-41195445 None:intergenic 55.0%
GCAAAGGAAAGGTCCATCCC+AGG - chr3_4:41195448-41195467 None:intergenic 55.0%
AACCACCCAAGAGTGGCGAA+AGG + chr3_4:41195878-41195897 Msa0500660:three_prime_UTR 55.0%
AACCTTTCGCCACTCTTGGG+TGG - chr3_4:41195883-41195902 None:intergenic 55.0%
TGCGCATACAAGTGGCAGTG+TGG - chr3_4:41196196-41196215 None:intergenic 55.0%
GGTTGTGTCTGGTGTCTGGG+TGG + chr3_4:41191917-41191936 Msa0500660:intron 60.0%
!! CCATTGCTTTGAGGGTGGGG+TGG - chr3_4:41192429-41192448 None:intergenic 60.0%
CCACCCCACCCTCAAAGCAA+TGG + chr3_4:41192426-41192445 Msa0500660:intron 60.0%
AGTGGGTAGCAGCGTTGCCA+AGG + chr3_4:41192714-41192733 Msa0500660:CDS 60.0%
GTGGGTAGCAGCGTTGCCAA+GGG + chr3_4:41192715-41192734 Msa0500660:CDS 60.0%
AGCAGCGTTGCCAAGGGCTT+TGG + chr3_4:41192721-41192740 Msa0500660:CDS 60.0%
GGTCGGCTAAATACAGGCGG+AGG + chr3_4:41193662-41193681 Msa0500660:CDS 60.0%
GGTCCGTTGAGATGTTGGCC+TGG + chr3_4:41194183-41194202 Msa0500660:CDS 60.0%
! CCGTTGAGATGTTGGCCTGG+TGG + chr3_4:41194186-41194205 Msa0500660:CDS 60.0%
CGAGAGAGACACAAGCCACC+AGG - chr3_4:41194204-41194223 None:intergenic 60.0%
ACGTAAGGAAACCGCGTCCC+TGG + chr3_4:41195427-41195446 Msa0500660:CDS 60.0%
CGTAAGGAAACCGCGTCCCT+GGG + chr3_4:41195428-41195447 Msa0500660:CDS 60.0%
AAAGGTCCATCCCAGGGACG+CGG - chr3_4:41195441-41195460 None:intergenic 60.0%
GCCACTTGTATGCGCAGTGC+AGG + chr3_4:41196200-41196219 Msa0500660:three_prime_UTR 60.0%
GCCTGCACTGCGCATACAAG+TGG - chr3_4:41196204-41196223 None:intergenic 60.0%
TTGTCGTGGCATGTCGGCGG+AGG + chr3_4:41194846-41194865 Msa0500660:CDS 65.0%
AGGAAACCGCGTCCCTGGGA+TGG + chr3_4:41195432-41195451 Msa0500660:CDS 65.0%
GAGGGTGGGGTGGGGCCAGA+AGG - chr3_4:41192419-41192438 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 41191217 41196281 41191217 ID=Msa0500660;Name=Msa0500660
chr3_4 mRNA 41191217 41196281 41191217 ID=Msa0500660-mRNA-1;Parent=Msa0500660;Name=Msa0500660-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.88|0.8|1|0.88|0.9|10|513|464
chr3_4 exon 41191217 41191223 41191217 ID=Msa0500660-mRNA-1:exon:8561;Parent=Msa0500660-mRNA-1
chr3_4 exon 41191499 41191734 41191499 ID=Msa0500660-mRNA-1:exon:8562;Parent=Msa0500660-mRNA-1
chr3_4 exon 41192614 41192785 41192614 ID=Msa0500660-mRNA-1:exon:8563;Parent=Msa0500660-mRNA-1
chr3_4 exon 41193381 41193534 41193381 ID=Msa0500660-mRNA-1:exon:8564;Parent=Msa0500660-mRNA-1
chr3_4 exon 41193628 41193691 41193628 ID=Msa0500660-mRNA-1:exon:8565;Parent=Msa0500660-mRNA-1
chr3_4 exon 41194180 41194287 41194180 ID=Msa0500660-mRNA-1:exon:8566;Parent=Msa0500660-mRNA-1
chr3_4 exon 41194766 41194891 41194766 ID=Msa0500660-mRNA-1:exon:8567;Parent=Msa0500660-mRNA-1
chr3_4 exon 41195001 41195236 41195001 ID=Msa0500660-mRNA-1:exon:8568;Parent=Msa0500660-mRNA-1
chr3_4 exon 41195317 41195516 41195317 ID=Msa0500660-mRNA-1:exon:8569;Parent=Msa0500660-mRNA-1
chr3_4 exon 41195677 41196281 41195677 ID=Msa0500660-mRNA-1:exon:8570;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41191217 41191223 41191217 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41191499 41191734 41191499 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41192614 41192785 41192614 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41193381 41193534 41193381 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41193628 41193691 41193628 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41194180 41194287 41194180 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41194766 41194891 41194766 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41195001 41195236 41195001 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41195317 41195516 41195317 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 CDS 41195677 41195768 41195677 ID=Msa0500660-mRNA-1:cds;Parent=Msa0500660-mRNA-1
chr3_4 three_prime_UTR 41195769 41196281 41195769 ID=Msa0500660-mRNA-1:three_prime_utr;Parent=Msa0500660-mRNA-1
Gene Sequence

>Msa0500660

ATGAATGGTGTTGTTGTGTTTGAAGAAATTGAGGGAACAATGTCTGGTCGGGGAGAACATCATTCGGTTCCCCTTTCGGTGCTGTTGAAGCGTGAATCGTTGAGCGAGAAAATCGAGAAACCTGATATGGTTGTTGTTTATGGAAATGCTAGCGAGAATAAGAAAGGAGAAGATTTCATTTTACTAAAGACCGAATGTCAAAGAGTCGTTTGTGATGGTGTTTCTACATATTCTGTTTTTGGGCTATTTGACGGACACAATGGATCTGCTGCTGCAATTTATGCCAAGGAGAATCTTCTGAACAATGTTTTAGGTGCCATTCCTCCTGATCTCAACAGAGATGAGTGGGTAGCAGCGTTGCCAAGGGCTTTGGTTGCTGGCTTTGTGAAGACTGATAAAGATTTTCAACAGAAAGCACAAACATCGGGAACAACTGTAACCTTCGTGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAACCTTCTGAGGGCGGGCTTCATTACTTGTCAGCAGATCATCGACTGGACACAAATGAAGAAGAGAGGGTGCGCATCACTTCTAGTGGGGGTGAAGTTGGTCGGCTAAATACAGGCGGAGGTGCAGAGGTTGGTCCGTTGAGATGTTGGCCTGGTGGCTTGTGTCTCTCTCGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCATATGTAAAGCAAGTGAAGCTTTCCAATGCTGGAGGAAGACTTGTTATCAGCAGTGATGGAGTCTGGGATGCTCTAACTGCAGAAATGGTCCTTGATTGTTGTCGTGGCATGTCGGCGGAGGCTGCAGCACCACATATTGTAAAAGAATCTTTGCAAGCAAAGGGACTTAGAGATGACACAACCTGCATCGTGGTCGATATATTACCCCAGGAGAAACCACCTACTTCTGCACCAACACAAAAGAAACCGGTAAAAGGAATGTTGAAGGCCATTTTCCGCAAAAAGTCCTCTGAGTCATCTTCGTATGTTGAAAAAGAATACGTTGAGCCAGATATGGTACGGGAACTATACGAGGAAGGATCTGCCTTGCTTTCAGAAAGGTTTGAAACAAAATATCCACTCTGCAACATGTTCAAGTTGTTCATGTGTGCAGTGTGTCAAGTAGAGATTAAACCTGGGGAGGGTATTTCAGTACATGAGGGTGCGCCTAACGTAAGGAAACCGCGTCCCTGGGATGGACCTTTCCTTTGCTTAAGTTGCCAAAAGAAGAAAGAAGCCATGGAAGGGAAACGGATATCAGAGATTGTTCATATAACGCAAAAGTCAAACTTCCAAGCAACTGTGACTCCCATTATTACATCGGGGGTTTCTCAGAATAAGGATTCATTTTGA
Protein sequence

>Msa0500660

MNGVVVFEEIEGTMSGRGEHHSVPLSVLLKRESLSEKIEKPDMVVVYGNASENKKGEDFILLKTECQRVVCDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLGAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQKAQTSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGLHYLSADHRLDTNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSNAGGRLVISSDGVWDALTAEMVLDCCRGMSAEAAAPHIVKESLQAKGLRDDTTCIVVDILPQEKPPTSAPTQKKPVKGMLKAIFRKKSSESSSYVEKEYVEPDMVRELYEEGSALLSERFETKYPLCNMFKLFMCAVCQVEIKPGEGISVHEGAPNVRKPRPWDGPFLCLSCQKKKEAMEGKRISEIVHITQKSNFQATVTPIITSGVSQNKDSF*