Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060630 | XP_013466502.1 | 92.265 | 543 | 1 | 2 | 1 | 502 | 1 | 543 | 0.0 | 1002 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060630 | sp|Q94K05|TCPQ_ARATH | 76.779 | 534 | 80 | 3 | 1 | 490 | 1 | 534 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060630 | A0A072VGH7 | 92.265 | 543 | 1 | 2 | 1 | 502 | 1 | 543 | 0.0 | 1002 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016540 | Msa0060630 | 0.801969 | 7.005143e-49 | -8.615850e-47 |
| Msa0060630 | Msa0130110 | 0.800255 | 1.570189e-48 | -8.615850e-47 |
| Msa0060630 | Msa0225480 | 0.818475 | 1.923069e-52 | -8.615850e-47 |
| Msa0060630 | Msa0241830 | 0.813200 | 2.887059e-51 | -8.615850e-47 |
| Msa0060630 | Msa0296250 | 0.802338 | 5.881698e-49 | -8.615850e-47 |
| Msa0060630 | Msa0322900 | 0.804783 | 1.830268e-49 | -8.615850e-47 |
| Msa0060630 | Msa0430230 | 0.810920 | 9.066023e-51 | -8.615850e-47 |
| Msa0060630 | Msa0513370 | 0.812244 | 4.673859e-51 | -8.615850e-47 |
| Msa0060630 | Msa0626270 | 0.800253 | 1.572044e-48 | -8.615850e-47 |
| Msa0060630 | Msa1127590 | 0.802073 | 6.670948e-49 | -8.615850e-47 |
| Msa0060630 | Msa1361660 | 0.809702 | 1.660218e-50 | -8.615850e-47 |
| Msa0060630 | Msa1461540 | 0.827327 | 1.663305e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060630 | MtrunA17_Chr1g0160221 | 92.265 | 543 | 1 | 2 | 1 | 502 | 1 | 543 | 0.0 | 1002 |
| Msa0060630 | MtrunA17_Chr6g0461541 | 84.104 | 541 | 43 | 4 | 4 | 502 | 1 | 540 | 0.0 | 901 |
| Msa0060630 | MtrunA17_Chr2g0282161 | 26.245 | 522 | 320 | 13 | 29 | 492 | 24 | 538 | 2.56e-53 | 188 |
| Msa0060630 | MtrunA17_Chr8g0380331 | 27.853 | 517 | 306 | 11 | 28 | 482 | 23 | 534 | 1.33e-50 | 181 |
| Msa0060630 | MtrunA17_Chr5g0440381 | 25.382 | 524 | 331 | 12 | 11 | 482 | 11 | 526 | 2.55e-47 | 172 |
| Msa0060630 | MtrunA17_Chr3g0123341 | 24.612 | 516 | 340 | 8 | 13 | 482 | 18 | 530 | 1.95e-39 | 150 |
| Msa0060630 | MtrunA17_Chr7g0241881 | 27.015 | 459 | 308 | 9 | 47 | 486 | 70 | 520 | 6.35e-38 | 145 |
| Msa0060630 | MtrunA17_Chr7g0272821 | 27.015 | 459 | 308 | 10 | 47 | 486 | 70 | 520 | 1.52e-37 | 144 |
| Msa0060630 | MtrunA17_Chr3g0139481 | 23.969 | 509 | 285 | 7 | 23 | 485 | 23 | 475 | 1.75e-34 | 135 |
| Msa0060630 | MtrunA17_Chr7g0214841 | 22.780 | 518 | 334 | 11 | 25 | 484 | 18 | 527 | 1.23e-28 | 119 |
| Msa0060630 | MtrunA17_Chr8g0392171 | 24.522 | 314 | 173 | 8 | 171 | 457 | 3 | 279 | 8.01e-17 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0060630 | AT3G03960.1 | 76.779 | 534 | 80 | 3 | 1 | 490 | 1 | 534 | 0.0 | 840 |
| Msa0060630 | AT3G18190.1 | 25.394 | 508 | 324 | 7 | 29 | 485 | 33 | 536 | 1.19e-50 | 181 |
| Msa0060630 | AT3G20050.1 | 27.466 | 517 | 308 | 11 | 28 | 482 | 23 | 534 | 3.74e-50 | 180 |
| Msa0060630 | AT5G26360.1 | 25.856 | 526 | 317 | 13 | 29 | 492 | 24 | 538 | 1.67e-49 | 178 |
| Msa0060630 | AT3G11830.1 | 25.758 | 528 | 324 | 14 | 11 | 482 | 11 | 526 | 5.15e-47 | 172 |
| Msa0060630 | AT3G11830.2 | 26.046 | 526 | 323 | 15 | 11 | 482 | 11 | 524 | 8.52e-46 | 168 |
| Msa0060630 | AT1G24510.1 | 24.621 | 528 | 344 | 10 | 3 | 482 | 9 | 530 | 1.45e-39 | 150 |
| Msa0060630 | AT1G24510.2 | 24.615 | 455 | 322 | 6 | 47 | 482 | 2 | 454 | 8.12e-39 | 147 |
| Msa0060630 | AT1G24510.3 | 24.615 | 455 | 322 | 6 | 47 | 482 | 25 | 477 | 1.48e-38 | 147 |
| Msa0060630 | AT5G20890.1 | 25.602 | 457 | 317 | 8 | 47 | 486 | 70 | 520 | 1.15e-35 | 139 |
| Msa0060630 | AT3G02530.1 | 25.160 | 469 | 310 | 11 | 48 | 484 | 68 | 527 | 1.70e-32 | 130 |
| Msa0060630 | AT5G16070.1 | 24.625 | 467 | 314 | 10 | 48 | 484 | 68 | 526 | 2.42e-31 | 127 |
| Msa0060630 | AT4G08640.1 | 34.969 | 163 | 77 | 3 | 168 | 329 | 1 | 135 | 3.42e-22 | 94.0 |
Find 127 sgRNAs with CRISPR-Local
Find 598 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCCTGCTGCTAAGATTT+TGG | 0.169868 | 1_2:+18412324 | Msa0060630:CDS |
| TTTGATTTCCATGGAATATC+AGG | 0.193503 | 1_2:+18419720 | Msa0060630:three_prime_UTR |
| GCATTCTCCGCCAATGTTCT+AGG | 0.257968 | 1_2:-18417821 | None:intergenic |
| AATTCATGCTTGTAGGCTTA+TGG | 0.265137 | 1_2:+18416217 | Msa0060630:intron |
| AAAATGGTGGGTTTACCTTA+TGG | 0.271750 | 1_2:+18411391 | Msa0060630:exon |
| ATTTCAGACTATGGAAATAT+TGG | 0.272556 | 1_2:+18413369 | Msa0060630:intron |
| CGCGAAAGTTGGCATTGATT+TGG | 0.278396 | 1_2:+18417901 | Msa0060630:CDS |
| GTGAGAACTGACTCTTGTTT+TGG | 0.288454 | 1_2:+18419600 | Msa0060630:three_prime_UTR |
| TTGTCCACATTAAAGTTTAC+AGG | 0.307478 | 1_2:-18413643 | None:intergenic |
| TCTCTTCATTTCGTGGGTTT+AGG | 0.322659 | 1_2:+18411282 | Msa0060630:five_prime_UTR |
| GCGTAATAGTACAGTTGTTC+GGG | 0.323609 | 1_2:+18413699 | Msa0060630:CDS |
| GTCTAAAGCCCGAGGTTTCT+AGG | 0.325447 | 1_2:+18411243 | None:intergenic |
| ATGGTGCTGAAGAGCTTATT+AGG | 0.332856 | 1_2:+18412425 | Msa0060630:CDS |
| TTTGCCGGCGAGTTACTTCA+TGG | 0.340967 | 1_2:+18412406 | Msa0060630:CDS |
| TGAGGAAGGTTCCGACAATA+TGG | 0.361565 | 1_2:+18413402 | Msa0060630:CDS |
| TGACAGTCCTTACAATGATA+TGG | 0.363937 | 1_2:-18419920 | None:intergenic |
| GTTCGTGTCGCAAAGCTCTT+AGG | 0.365160 | 1_2:+18413667 | Msa0060630:CDS |
| TCTGTTTCAGTTGAGGAAAT+TGG | 0.367632 | 1_2:+18416431 | Msa0060630:CDS |
| TCAACATATCCAAGATCATC+TGG | 0.376981 | 1_2:-18416407 | None:intergenic |
| AAAGCTCAACAAGAGGAAAT+TGG | 0.382605 | 1_2:+18412358 | Msa0060630:CDS |
| GACCTTCTTTGAGCATAGAT+TGG | 0.383461 | 1_2:-18411417 | None:intergenic |
| GTAGCAACTGTTGTCTTAAG+AGG | 0.386858 | 1_2:+18416628 | Msa0060630:CDS |
| TGCGTAATAGTACAGTTGTT+CGG | 0.388090 | 1_2:+18413698 | Msa0060630:CDS |
| TACACTTGGCAACTTGGCTT+GGG | 0.389110 | 1_2:+18419653 | Msa0060630:three_prime_UTR |
| ATCAAGGCTGTAGTTGATTC+TGG | 0.389293 | 1_2:+18415987 | Msa0060630:CDS |
| TCCTACTACACTTGGCAACT+TGG | 0.391394 | 1_2:+18419647 | Msa0060630:three_prime_UTR |
| CTACACTTGGCAACTTGGCT+TGG | 0.395787 | 1_2:+18419652 | Msa0060630:three_prime_UTR |
| GCTTTCTCCATATCATTGTA+AGG | 0.395999 | 1_2:+18419913 | Msa0060630:three_prime_UTR |
| ATGTCACAACCACACATGTT+TGG | 0.396159 | 1_2:+18417942 | Msa0060630:CDS |
| AGAACATTGGCGGAGAATGC+TGG | 0.398518 | 1_2:+18417824 | Msa0060630:CDS |
| TCTCATACATTCTGCTGAAC+AGG | 0.403846 | 1_2:+18414841 | Msa0060630:CDS |
| TGTCACAACCACACATGTTT+GGG | 0.407686 | 1_2:+18417943 | Msa0060630:CDS |
| GCAGGTTGCTCTCTCTTGCC+AGG | 0.408481 | 1_2:-18419554 | None:intergenic |
| ATTATTATGGCGAAACCGGC+TGG | 0.409507 | 1_2:+18419527 | Msa0060630:CDS |
| TCAGATTATTATGGCGAAAC+CGG | 0.414996 | 1_2:+18419523 | Msa0060630:intron |
| GAGAGAAGTGCGAGTGATAG+TGG | 0.420049 | 1_2:-18411503 | None:intergenic |
| CGACCAAACCCAGATGATCT+TGG | 0.424847 | 1_2:+18416398 | Msa0060630:CDS |
| ATGCTGCATGCACTGTGCTA+CGG | 0.426838 | 1_2:+18418264 | Msa0060630:CDS |
| CTCCTCCGCTTACAATCACT+TGG | 0.429888 | 1_2:-18416013 | None:intergenic |
| TGAGATGATTCCTAGAACAT+TGG | 0.438030 | 1_2:+18417811 | Msa0060630:CDS |
| AGCATAGATTGGATTCCATA+AGG | 0.439577 | 1_2:-18411406 | None:intergenic |
| ATTTCAGTTGCTGCAGCTCC+AGG | 0.441650 | 1_2:-18416940 | None:intergenic |
| TATTTCTCTTTCTAGAATGT+TGG | 0.442482 | 1_2:+18419766 | Msa0060630:three_prime_UTR |
| TTTGGACGAGGGTGTTTGTA+AGG | 0.446924 | 1_2:+18417919 | Msa0060630:CDS |
| ACAAACCTTAGCAATGGCTT+TGG | 0.461437 | 1_2:-18412485 | None:intergenic |
| TATCCAAGATCATCTGGGTT+TGG | 0.472971 | 1_2:-18416401 | None:intergenic |
| CACTGTGCTACGGGTGGACC+AGG | 0.473173 | 1_2:+18418274 | Msa0060630:CDS |
| TGCGAGTGATAGTGGAGAGT+TGG | 0.476746 | 1_2:-18411495 | None:intergenic |
| TGCTGCATGCACTGTGCTAC+GGG | 0.481668 | 1_2:+18418265 | Msa0060630:CDS |
| TAGTACAGTTGTTCGGGGAA+TGG | 0.492637 | 1_2:+18413705 | Msa0060630:CDS |
| GAAGGTCACAAACATCTCTC+TGG | 0.498990 | 1_2:+18411433 | Msa0060630:CDS |
| ATTGTAAGCGGAGGAGCAGT+AGG | 0.500138 | 1_2:+18416020 | Msa0060630:CDS |
| GAGAGAGCAACCTGCTGGCA+TGG | 0.500525 | 1_2:+18419562 | Msa0060630:CDS |
| TAGCATAAAGAGAATGGAAA+AGG | 0.501632 | 1_2:+18413750 | Msa0060630:CDS |
| TGCTGAAGAGCTTATTAGGA+TGG | 0.509633 | 1_2:+18412429 | Msa0060630:CDS |
| TCTAAAGCCCGAGGTTTCTA+GGG | 0.513366 | 1_2:+18411244 | None:intergenic |
| GCCAAGTTGCCAAGTGTAGT+AGG | 0.514381 | 1_2:-18419648 | None:intergenic |
| TACAACTGGTTCTGTAGCTA+TGG | 0.514502 | 1_2:+18416283 | Msa0060630:CDS |
| ACTATCACTCGCACTTCTCT+CGG | 0.515826 | 1_2:+18411505 | Msa0060630:CDS |
| GCATCAGGAAACGCGAAAGT+TGG | 0.516012 | 1_2:+18417890 | Msa0060630:CDS |
| GAACATTGGCGGAGAATGCT+GGG | 0.519436 | 1_2:+18417825 | Msa0060630:CDS |
| GCTGTTGCTAGCAAGCAATT+CGG | 0.521387 | 1_2:+18413466 | Msa0060630:CDS |
| TAGTCTTCGTCCATGCCAGC+AGG | 0.523539 | 1_2:-18419572 | None:intergenic |
| GGCAAGAGAGAGCAACCTGC+TGG | 0.526440 | 1_2:+18419557 | Msa0060630:CDS |
| CGGAGGAGCAGTAGGAGAGA+TGG | 0.529826 | 1_2:+18416028 | Msa0060630:CDS |
| ATCCAATCTATGCTCAAAGA+AGG | 0.531352 | 1_2:+18411415 | Msa0060630:CDS |
| GCTGAAGAGCTTATTAGGAT+GGG | 0.532631 | 1_2:+18412430 | Msa0060630:CDS |
| TGTTGATTCTGTTTCAGTTG+AGG | 0.534399 | 1_2:+18416424 | Msa0060630:CDS |
| CTCTACGCAGAACATGCATC+AGG | 0.534639 | 1_2:+18417875 | Msa0060630:CDS |
| GTCACGGACATCCATATTGT+CGG | 0.535283 | 1_2:-18413413 | None:intergenic |
| AAAACCAAAATCTTAGCAGC+AGG | 0.535365 | 1_2:-18412328 | None:intergenic |
| ACATCTGCAACTGAAACTAA+AGG | 0.536029 | 1_2:+18414812 | Msa0060630:CDS |
| TTGAGGAAATTGGTGGTGCA+AGG | 0.536879 | 1_2:+18416441 | Msa0060630:CDS |
| AGGGATAGCCGTATTGTGCC+TGG | 0.537772 | 1_2:+18416922 | Msa0060630:CDS |
| GATGATTCCTAGAACATTGG+CGG | 0.537916 | 1_2:+18417814 | Msa0060630:CDS |
| CTATTTATCAGACTATGTGC+AGG | 0.538247 | 1_2:+18416902 | Msa0060630:intron |
| TTATTATGGCGAAACCGGCT+GGG | 0.541494 | 1_2:+18419528 | Msa0060630:CDS |
| TATTATGGCGAAACCGGCTG+GGG | 0.547153 | 1_2:+18419529 | Msa0060630:CDS |
| TTGATTTCCATGGAATATCA+GGG | 0.550011 | 1_2:+18419721 | Msa0060630:three_prime_UTR |
| GTTTCAGTTGAGGAAATTGG+TGG | 0.550129 | 1_2:+18416434 | Msa0060630:CDS |
| AATATTGGACGAACTTGTTG+AGG | 0.552189 | 1_2:+18413384 | Msa0060630:CDS |
| CGCACTTCTCTCGGTCCCAA+TGG | 0.552754 | 1_2:+18411514 | Msa0060630:CDS |
| TGTTGGTAGCATAAAGAGAA+TGG | 0.554362 | 1_2:+18413744 | Msa0060630:CDS |
| ATTGAAAGAGCAGTTGATGA+TGG | 0.555713 | 1_2:+18416676 | Msa0060630:CDS |
| ATTACATCCCTGATATTCCA+TGG | 0.564408 | 1_2:-18419728 | None:intergenic |
| TAGGTTGCTGTGTTTGCTGG+TGG | 0.566104 | 1_2:+18414782 | Msa0060630:intron |
| TTGGACGAACTTGTTGAGGA+AGG | 0.568925 | 1_2:+18413388 | Msa0060630:CDS |
| CTGCAGCTCCAGGCACAATA+CGG | 0.572095 | 1_2:-18416930 | None:intergenic |
| ACATTATGTCCTACTACACT+TGG | 0.574129 | 1_2:+18419639 | Msa0060630:three_prime_UTR |
| GTCGCAAAGCTCTTAGGAGG+AGG | 0.576535 | 1_2:+18413673 | Msa0060630:CDS |
| AGTTGGCATTGATTTGGACG+AGG | 0.578243 | 1_2:+18417907 | Msa0060630:CDS |
| GAATGCTGGGCTAAATGCAA+TGG | 0.579804 | 1_2:+18417838 | Msa0060630:CDS |
| AAACCCTGTAAACTTTAATG+TGG | 0.581302 | 1_2:+18413639 | Msa0060630:CDS |
| CATCCTAGTGAGATTATCAG+TGG | 0.585054 | 1_2:+18412457 | Msa0060630:CDS |
| TGAGGAAATTGGTGGTGCAA+GGG | 0.587609 | 1_2:+18416442 | Msa0060630:CDS |
| AAAGAGAATGGAAAAGGCAA+AGG | 0.588239 | 1_2:+18413756 | Msa0060630:CDS |
| CAACAAGAGGAAATTGGTGA+TGG | 0.592907 | 1_2:+18412364 | Msa0060630:CDS |
| TAGCTACAGAACCAGTTGTA+CGG | 0.593510 | 1_2:-18416280 | None:intergenic |
| AAATAACTTGCTCCTTGTCA+CGG | 0.594985 | 1_2:-18413429 | None:intergenic |
| TAAAGTAGAAGAGCTCATCA+AGG | 0.595111 | 1_2:+18415971 | Msa0060630:CDS |
| AACCTAACAAACCTTAGCAA+TGG | 0.596276 | 1_2:-18412491 | None:intergenic |
| TGATGGAGTGAACACTTACA+AGG | 0.597565 | 1_2:+18416693 | Msa0060630:CDS |
| GGCTGGGAAAGCTCAACAAG+AGG | 0.600488 | 1_2:+18412351 | Msa0060630:CDS |
| CAATATGGATGTCCGTGACA+AGG | 0.600789 | 1_2:+18413417 | Msa0060630:CDS |
| TGCAGCTTCAAGCTTTACGG+TGG | 0.609231 | 1_2:-18411368 | None:intergenic |
| AAATTATTCGAAAACTGAAG+AGG | 0.610195 | 1_2:+18415947 | Msa0060630:CDS |
| TCCTCCGCTTACAATCACTT+GGG | 0.610330 | 1_2:-18416012 | None:intergenic |
| TGTCCACATTAAAGTTTACA+GGG | 0.611569 | 1_2:-18413642 | None:intergenic |
| CAACATATCCAAGATCATCT+GGG | 0.611755 | 1_2:-18416406 | None:intergenic |
| ATATACCAAAGCCATTGCTA+AGG | 0.614733 | 1_2:+18412480 | Msa0060630:CDS |
| GTTGGCATTGATTTGGACGA+GGG | 0.615351 | 1_2:+18417908 | Msa0060630:CDS |
| GCACAACATAACTGCAGCAG+AGG | 0.617372 | 1_2:+18411313 | Msa0060630:five_prime_UTR |
| TATCCACTGATAATCTCACT+AGG | 0.620365 | 1_2:-18412460 | None:intergenic |
| AGCACCATGAAGTAACTCGC+CGG | 0.622286 | 1_2:-18412410 | None:intergenic |
| CGTGTCGCAAAGCTCTTAGG+AGG | 0.623567 | 1_2:+18413670 | Msa0060630:CDS |
| TGCATGCACTGTGCTACGGG+TGG | 0.630144 | 1_2:+18418268 | Msa0060630:CDS |
| AAGTAATTTACTTAGCCATG+TGG | 0.643526 | 1_2:-18417970 | None:intergenic |
| TATTTATCAGACTATGTGCA+GGG | 0.644306 | 1_2:+18416903 | Msa0060630:intron |
| GCCCAAGTGATTGTAAGCGG+AGG | 0.645935 | 1_2:+18416011 | Msa0060630:CDS |
| ACATGTTTGGGATCTCCACA+TGG | 0.646020 | 1_2:+18417955 | Msa0060630:CDS |
| CACAACATAACTGCAGCAGA+GGG | 0.647493 | 1_2:+18411314 | Msa0060630:five_prime_UTR |
| CGTAATAGTACAGTTGTTCG+GGG | 0.666054 | 1_2:+18413700 | Msa0060630:CDS |
| GGTGCCCAAGTGATTGTAAG+CGG | 0.667648 | 1_2:+18416008 | Msa0060630:CDS |
| ATTATGGCGAAACCGGCTGG+GGG | 0.698551 | 1_2:+18419530 | Msa0060630:CDS |
| GTGGAGATCCCAAACATGTG+TGG | 0.710523 | 1_2:-18417951 | None:intergenic |
| GTTCTGAGAAATGATGCTGT+TGG | 0.720603 | 1_2:+18413727 | Msa0060630:CDS |
| CTGTCATTTATCAAGCACAG+TGG | 0.756751 | 1_2:+18419937 | Msa0060630:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAATAAAATAAAAT+AGG | - | chr1_2:18418320-18418339 | None:intergenic | 0.0% |
| !!! | TATTTTATTTTATTTATTTT+TGG | + | chr1_2:18418319-18418338 | Msa0060630:intron | 0.0% |
| !!! | TAATTTTTTTTTTTTTTATT+TGG | + | chr1_2:18419817-18419836 | Msa0060630:three_prime_UTR | 0.0% |
| !!! | AATTTTTTTTTTTTTTATTT+GGG | + | chr1_2:18419818-18419837 | Msa0060630:three_prime_UTR | 0.0% |
| !!! | AATTAATTTGTTTTGTTATT+AGG | + | chr1_2:18412217-18412236 | Msa0060630:intron | 10.0% |
| !!! | ATTAATTTGTTTTGTTATTA+GGG | + | chr1_2:18412218-18412237 | Msa0060630:intron | 10.0% |
| !!! | GATTATTTTTCTTTAATTAT+TGG | - | chr1_2:18415209-18415228 | None:intergenic | 10.0% |
| !! | AACAAAAATTAGAAAAAAAA+AGG | - | chr1_2:18416354-18416373 | None:intergenic | 10.0% |
| !!! | GATTATAAAAAAAGCAATTT+TGG | - | chr1_2:18411977-18411996 | None:intergenic | 15.0% |
| !! | TTAATGATTTATCATTAACT+GGG | - | chr1_2:18414002-18414021 | None:intergenic | 15.0% |
| !! | TTTAATGATTTATCATTAAC+TGG | - | chr1_2:18414003-18414022 | None:intergenic | 15.0% |
| !! | TAAAAATAAACGATAAATGA+AGG | + | chr1_2:18414019-18414038 | Msa0060630:intron | 15.0% |
| !! | AAAAATAAACGATAAATGAA+GGG | + | chr1_2:18414020-18414039 | Msa0060630:intron | 15.0% |
| !!! | ATTACTTTATTCTGTTTTAT+TGG | + | chr1_2:18414894-18414913 | Msa0060630:intron | 15.0% |
| !!! | TCTTGAGTTTTTTTTTAAAA+TGG | + | chr1_2:18415866-18415885 | Msa0060630:intron | 15.0% |
| !! | ATTGCTTAATAAAAAAAGTA+TGG | + | chr1_2:18416780-18416799 | Msa0060630:intron | 15.0% |
| !!! | AGCAAACTATTTTATATATA+GGG | - | chr1_2:18418346-18418365 | None:intergenic | 15.0% |
| !!! | TAGCAAACTATTTTATATAT+AGG | - | chr1_2:18418347-18418366 | None:intergenic | 15.0% |
| !! | TGTCAAAAAAAAAAAAAAAC+TGG | + | chr1_2:18418437-18418456 | Msa0060630:intron | 15.0% |
| !!! | ATGAAAATGTAATATTTTCA+GGG | + | chr1_2:18418481-18418500 | Msa0060630:intron | 15.0% |
| !!! | ATTTTATCGATACAAATAAT+AGG | - | chr1_2:18419069-18419088 | None:intergenic | 15.0% |
| !! | ATGTTATCAAAAATAAGATA+TGG | - | chr1_2:18419453-18419472 | None:intergenic | 15.0% |
| !! | AATAAGTTGTTTATCCAAAA+TGG | - | chr1_2:18411684-18411703 | None:intergenic | 20.0% |
| !! | AAAATAGCTTCTGTTTAAAT+TGG | + | chr1_2:18411999-18412018 | Msa0060630:intron | 20.0% |
| !! | AGTTAAACAAAAACAAACTA+GGG | - | chr1_2:18412191-18412210 | None:intergenic | 20.0% |
| !! | TAGTTAAACAAAAACAAACT+AGG | - | chr1_2:18412192-18412211 | None:intergenic | 20.0% |
| !! | TAAGATGGTTATAAATCATT+TGG | + | chr1_2:18412246-18412265 | Msa0060630:intron | 20.0% |
| !!! | AATTTAACTATTTCTTTTGC+CGG | + | chr1_2:18412391-18412410 | Msa0060630:CDS | 20.0% |
| !!! | CACAACAATATTTTGTTAAA+AGG | + | chr1_2:18412570-18412589 | Msa0060630:intron | 20.0% |
| !!! | ATTATTAGTTTCATGTCATT+TGG | + | chr1_2:18412830-18412849 | Msa0060630:intron | 20.0% |
| !!! | TGGATTGTTTAAAATAAGAT+AGG | + | chr1_2:18412850-18412869 | Msa0060630:intron | 20.0% |
| !! | TGATCTATTATAGTATAGAA+CGG | - | chr1_2:18412905-18412924 | None:intergenic | 20.0% |
| !!! | CCATTAATTGAATACTTTTA+TGG | - | chr1_2:18412989-18413008 | None:intergenic | 20.0% |
| !!! | CCATAAAAGTATTCAATTAA+TGG | + | chr1_2:18412986-18413005 | Msa0060630:intron | 20.0% |
| !!! | TATATCAGAATATTTTCTGT+TGG | + | chr1_2:18413060-18413079 | Msa0060630:intron | 20.0% |
| !! | TATTGAAATCATAGTAAAAC+CGG | - | chr1_2:18413545-18413564 | None:intergenic | 20.0% |
| !! | ATGATTTCAATATACTTTGT+AGG | + | chr1_2:18413553-18413572 | Msa0060630:intron | 20.0% |
| !!! | TCTATATATTTGAGACTTTT+AGG | + | chr1_2:18413786-18413805 | Msa0060630:intron | 20.0% |
| !!! | CTATATATTTGAGACTTTTA+GGG | + | chr1_2:18413787-18413806 | Msa0060630:intron | 20.0% |
| !!! | CACACATCAATATTTTAAAA+TGG | - | chr1_2:18414173-18414192 | None:intergenic | 20.0% |
| !!! | CATTTTAAAATATTGATGTG+TGG | + | chr1_2:18414171-18414190 | Msa0060630:intron | 20.0% |
| !!! | CAATTTTGTATGATTTTTCT+TGG | + | chr1_2:18414388-18414407 | Msa0060630:intron | 20.0% |
| !! | ATATTTATTCAATGTCTAAG+TGG | + | chr1_2:18414923-18414942 | Msa0060630:intron | 20.0% |
| !! | TATTTATTCAATGTCTAAGT+GGG | + | chr1_2:18414924-18414943 | Msa0060630:intron | 20.0% |
| !!! | AAAACTTGTTTATCTAAAGT+TGG | - | chr1_2:18415413-18415432 | None:intergenic | 20.0% |
| !! | TCATAAAAAATCTTCTGTTA+CGG | + | chr1_2:18416326-18416345 | Msa0060630:intron | 20.0% |
| !! | TTAAAATGGGAAAATACTAA+TGG | - | chr1_2:18416529-18416548 | None:intergenic | 20.0% |
| !! | TCATATACAACACTTAAAAT+GGG | - | chr1_2:18416542-18416561 | None:intergenic | 20.0% |
| !! | ATCATATACAACACTTAAAA+TGG | - | chr1_2:18416543-18416562 | None:intergenic | 20.0% |
| !!! | TATAATACCATCTTAGTTTT+GGG | - | chr1_2:18417469-18417488 | None:intergenic | 20.0% |
| !!! | TTATAATACCATCTTAGTTT+TGG | - | chr1_2:18417470-18417489 | None:intergenic | 20.0% |
| !!! | ATTTTAGAATTTTTAGAGCA+GGG | - | chr1_2:18417622-18417641 | None:intergenic | 20.0% |
| !!! | TAATTTAACTTGTCATTGAA+TGG | - | chr1_2:18418200-18418219 | None:intergenic | 20.0% |
| !!! | CATGAAAATGTAATATTTTC+AGG | + | chr1_2:18418480-18418499 | Msa0060630:intron | 20.0% |
| !!! | TGAAAATGTAATATTTTCAG+GGG | + | chr1_2:18418482-18418501 | Msa0060630:intron | 20.0% |
| !! | ATATTAAAACCTACTGTTAT+CGG | - | chr1_2:18418761-18418780 | None:intergenic | 20.0% |
| !! | CAAAAGAAAGAAAGAAATTA+TGG | - | chr1_2:18419034-18419053 | None:intergenic | 20.0% |
| !!! | ATAAAGTATTGTAGTTACTT+TGG | + | chr1_2:18419229-18419248 | Msa0060630:intron | 20.0% |
| !! | AATTTATGCATAGAGAAAAA+TGG | - | chr1_2:18419479-18419498 | None:intergenic | 20.0% |
| !! | TTTCTCTATGCATAAATTTA+TGG | + | chr1_2:18419481-18419500 | Msa0060630:intron | 20.0% |
| !! | TTCTCTATGCATAAATTTAT+GGG | + | chr1_2:18419482-18419501 | Msa0060630:intron | 20.0% |
| !!! | TTGATGTTTTCAGATTATTA+TGG | + | chr1_2:18419514-18419533 | Msa0060630:intron | 20.0% |
| !!! | ATTTTGAATTTTGATTTCCA+TGG | + | chr1_2:18419711-18419730 | Msa0060630:three_prime_UTR | 20.0% |
| ! | AAAATGAGAATGTGAAGTTA+GGG | - | chr1_2:18411548-18411567 | None:intergenic | 25.0% |
| !!! | TGAAGTTTAGTTTTTGATCT+AGG | + | chr1_2:18411657-18411676 | Msa0060630:intron | 25.0% |
| ! | AAGCTTATACATGTGTTTAT+CGG | - | chr1_2:18411724-18411743 | None:intergenic | 25.0% |
| ! | AAGTTAATTCAAAATGTTCG+AGG | + | chr1_2:18411821-18411840 | Msa0060630:intron | 25.0% |
| !! | TACTTCAAGTTCATTTACAA+TGG | - | chr1_2:18412302-18412321 | None:intergenic | 25.0% |
| !! | AAGTATAATTCCATCCATTT+TGG | - | chr1_2:18412538-18412557 | None:intergenic | 25.0% |
| !! | TGTCACTAGACAATTTTAAA+AGG | + | chr1_2:18412648-18412667 | Msa0060630:intron | 25.0% |
| !!! | GTCACTAGACAATTTTAAAA+GGG | + | chr1_2:18412649-18412668 | Msa0060630:intron | 25.0% |
| ! | GATCTATTATAGTATAGAAC+GGG | - | chr1_2:18412904-18412923 | None:intergenic | 25.0% |
| ! | TCTGATATATATGCATCAAA+AGG | - | chr1_2:18413049-18413068 | None:intergenic | 25.0% |
| ! | ATGCCTTATAAAATTAAACG+AGG | + | chr1_2:18413148-18413167 | Msa0060630:intron | 25.0% |
| ! | TGCCTTATAAAATTAAACGA+GGG | + | chr1_2:18413149-18413168 | Msa0060630:intron | 25.0% |
| ! | CTTTGTTCAAATTTCAAAGT+TGG | - | chr1_2:18413214-18413233 | None:intergenic | 25.0% |
| !!! | ACTTTGAAATTTGAACAAAG+AGG | + | chr1_2:18413214-18413233 | Msa0060630:intron | 25.0% |
| ! | TAAAATAAGAAGGTTTATGC+AGG | + | chr1_2:18413239-18413258 | Msa0060630:intron | 25.0% |
| ! | GATAAATCGCTAAACTATAT+TGG | - | chr1_2:18413303-18413322 | None:intergenic | 25.0% |
| !! | ATATTTCCATAGTCTGAAAT+AGG | - | chr1_2:18413369-18413388 | None:intergenic | 25.0% |
| ! | ATTTCAGACTATGGAAATAT+TGG | + | chr1_2:18413369-18413388 | Msa0060630:intron | 25.0% |
| ! | ATTGAAATCATAGTAAAACC+GGG | - | chr1_2:18413544-18413563 | None:intergenic | 25.0% |
| !!! | TTAAAGTTTACAGGGTTTTT+TGG | - | chr1_2:18413637-18413656 | None:intergenic | 25.0% |
| ! | CGACTTACTATATTGTTTAT+TGG | + | chr1_2:18413824-18413843 | Msa0060630:intron | 25.0% |
| ! | ATGCAAAAATGATAAAGTTG+TGG | - | chr1_2:18413860-18413879 | None:intergenic | 25.0% |
| ! | TTAGTCAAAAGTCAAAACAT+AGG | - | chr1_2:18413927-18413946 | None:intergenic | 25.0% |
| !!! | TTGACTTTTGACTAATATCA+AGG | + | chr1_2:18413932-18413951 | Msa0060630:intron | 25.0% |
| ! | ATTAACTGGGAAAATGTATT+AGG | - | chr1_2:18413989-18414008 | None:intergenic | 25.0% |
| ! | AAATAGCTAAGTATAGAAGA+TGG | + | chr1_2:18414054-18414073 | Msa0060630:intron | 25.0% |
| !! | TCAGCATTTGTCTTTTAAAT+GGG | + | chr1_2:18414265-18414284 | Msa0060630:intron | 25.0% |
| !! | GTACATACCATTTGTTAAAA+GGG | + | chr1_2:18414428-18414447 | Msa0060630:intron | 25.0% |
| !! | ACATATTCCCTTTTAACAAA+TGG | - | chr1_2:18414438-18414457 | None:intergenic | 25.0% |
| ! | TGAATTACAAAATCTCAACA+TGG | - | chr1_2:18414543-18414562 | None:intergenic | 25.0% |
| !!! | TTATATGTTCTCTCGTTTTT+GGG | + | chr1_2:18414594-18414613 | Msa0060630:intron | 25.0% |
| ! | TTTCACTAATAGTCTAATAC+TGG | - | chr1_2:18415051-18415070 | None:intergenic | 25.0% |
| !!! | ATTTGATTTGAAGCAATAGT+AGG | - | chr1_2:18415164-18415183 | None:intergenic | 25.0% |
| !! | TTCTTTAATTATTGGTTGCA+AGG | - | chr1_2:18415201-18415220 | None:intergenic | 25.0% |
| ! | ATGTTCTGTTTAGGAATTTA+AGG | + | chr1_2:18415477-18415496 | Msa0060630:intron | 25.0% |
| !!! | TTTAAGGAAAAGTGTTTAGA+AGG | + | chr1_2:18415493-18415512 | Msa0060630:intron | 25.0% |
| !!! | TTAAGGAAAAGTGTTTAGAA+GGG | + | chr1_2:18415494-18415513 | Msa0060630:intron | 25.0% |
| ! | AATAATCCATGAACAACAAA+AGG | - | chr1_2:18415845-18415864 | None:intergenic | 25.0% |
| ! | AAATTATTCGAAAACTGAAG+AGG | + | chr1_2:18415947-18415966 | Msa0060630:CDS | 25.0% |
| ! | AGGCAATTAAAAGCAAAAAA+TGG | - | chr1_2:18416096-18416115 | None:intergenic | 25.0% |
| ! | TAATCAAAATTCATGCTTGT+AGG | + | chr1_2:18416210-18416229 | Msa0060630:intron | 25.0% |
| !! | CAAGGGTATGTTTAAATATT+TGG | + | chr1_2:18416459-18416478 | Msa0060630:intron | 25.0% |
| !! | TTTGGTTTCTGTTATATTCT+TGG | + | chr1_2:18416477-18416496 | Msa0060630:intron | 25.0% |
| ! | CATCATTAAACAAGATAAGA+GGG | - | chr1_2:18416569-18416588 | None:intergenic | 25.0% |
| ! | ACCATTGTTAAAAATGAAGA+AGG | + | chr1_2:18416595-18416614 | Msa0060630:CDS | 25.0% |
| !!! | ACCTTCTTCATTTTTAACAA+TGG | - | chr1_2:18416599-18416618 | None:intergenic | 25.0% |
| ! | ATTGTTAAAAATGAAGAAGG+TGG | + | chr1_2:18416598-18416617 | Msa0060630:CDS | 25.0% |
| ! | TATTAAGCAATCATTTCCTA+GGG | - | chr1_2:18416771-18416790 | None:intergenic | 25.0% |
| ! | TTATTAAGCAATCATTTCCT+AGG | - | chr1_2:18416772-18416791 | None:intergenic | 25.0% |
| !! | ATTTTGAATTGCACTTTTGA+AGG | + | chr1_2:18416834-18416853 | Msa0060630:intron | 25.0% |
| !! | TTTTGAATTGCACTTTTGAA+GGG | + | chr1_2:18416835-18416854 | Msa0060630:intron | 25.0% |
| ! | GGACTCTCAATAAAATTAAA+GGG | - | chr1_2:18417024-18417043 | None:intergenic | 25.0% |
| !!! | TTTTAGAATTTTTAGAGCAG+GGG | - | chr1_2:18417621-18417640 | None:intergenic | 25.0% |
| !!! | GATTTTAGAATTTTTAGAGC+AGG | - | chr1_2:18417623-18417642 | None:intergenic | 25.0% |
| ! | GCATTAAACGAGTAAAATAA+AGG | - | chr1_2:18417695-18417714 | None:intergenic | 25.0% |
| !! | TTTGATAATTCAGACATGAA+AGG | + | chr1_2:18417718-18417737 | Msa0060630:intron | 25.0% |
| !! | TTGATAATTCAGACATGAAA+GGG | + | chr1_2:18417719-18417738 | Msa0060630:intron | 25.0% |
| !! | GAAGTACTAAAAATTTGCAA+TGG | + | chr1_2:18417741-18417760 | Msa0060630:intron | 25.0% |
| ! | AAATATAAGCAGTTGAAAGA+AGG | - | chr1_2:18418155-18418174 | None:intergenic | 25.0% |
| ! | AATCATGTGTTCAATCTTTA+GGG | - | chr1_2:18418379-18418398 | None:intergenic | 25.0% |
| ! | AAATCATGTGTTCAATCTTT+AGG | - | chr1_2:18418380-18418399 | None:intergenic | 25.0% |
| ! | TGTACAAAAAATGAAATGTG+TGG | - | chr1_2:18418542-18418561 | None:intergenic | 25.0% |
| ! | TATGATAAACCTTCCATATA+GGG | - | chr1_2:18418810-18418829 | None:intergenic | 25.0% |
| ! | ATCATAGGAAAAATGAAATG+AGG | + | chr1_2:18418824-18418843 | Msa0060630:intron | 25.0% |
| ! | ACTCTAAATAATAAGTCACA+TGG | - | chr1_2:18419154-18419173 | None:intergenic | 25.0% |
| !! | AACATGAAACACAATGTTTT+CGG | - | chr1_2:18419190-18419209 | None:intergenic | 25.0% |
| !!! | ATAAGACTTTGTTGTTGTTT+GGG | + | chr1_2:18419395-18419414 | Msa0060630:intron | 25.0% |
| ! | TATGCATAAATTTATGGGTA+TGG | + | chr1_2:18419487-18419506 | Msa0060630:intron | 25.0% |
| !!! | TATTTCTCTTTCTAGAATGT+TGG | + | chr1_2:18419766-18419785 | Msa0060630:three_prime_UTR | 25.0% |
| ! | TTTCTTTTCTCTTCATTTCG+TGG | + | chr1_2:18411275-18411294 | Msa0060630:five_prime_UTR | 30.0% |
| ! | TTCTTTTCTCTTCATTTCGT+GGG | + | chr1_2:18411276-18411295 | Msa0060630:five_prime_UTR | 30.0% |
| CAAAATGAGAATGTGAAGTT+AGG | - | chr1_2:18411549-18411568 | None:intergenic | 30.0% | |
| CCTAGATCACAAAATAAACT+TGG | - | chr1_2:18411624-18411643 | None:intergenic | 30.0% | |
| !!! | CCAAGTTTATTTTGTGATCT+AGG | + | chr1_2:18411621-18411640 | Msa0060630:intron | 30.0% |
| ! | TTTTTGATCTAGGTCCATTT+TGG | + | chr1_2:18411667-18411686 | Msa0060630:intron | 30.0% |
| ! | AAAACAGCTTATAGCTTGTA+TGG | - | chr1_2:18412027-18412046 | None:intergenic | 30.0% |
| !! | GAGATTTTTCAGAAGAACTT+AGG | - | chr1_2:18412117-18412136 | None:intergenic | 30.0% |
| GTTATTAGGGATGAATAAGA+TGG | + | chr1_2:18412231-18412250 | Msa0060630:intron | 30.0% | |
| TCATTTCGATTGATCCAAAA+TGG | + | chr1_2:18412521-18412540 | Msa0060630:intron | 30.0% | |
| TTTCTACTGTTCTCAACTAA+AGG | + | chr1_2:18412624-18412643 | Msa0060630:intron | 30.0% | |
| AAGATAGGATGACTGAAATA+TGG | + | chr1_2:18412865-18412884 | Msa0060630:intron | 30.0% | |
| ! | TCAGAATATTTTCTGTTGGA+TGG | + | chr1_2:18413064-18413083 | Msa0060630:intron | 30.0% |
| !! | TATTTTCTGTTGGATGGATT+TGG | + | chr1_2:18413070-18413089 | Msa0060630:intron | 30.0% |
| !! | ATTTTCTGTTGGATGGATTT+GGG | + | chr1_2:18413071-18413090 | Msa0060630:intron | 30.0% |
| GCCTTATAAAATTAAACGAG+GGG | + | chr1_2:18413150-18413169 | Msa0060630:intron | 30.0% | |
| !! | ACCCCTCGTTTAATTTTATA+AGG | - | chr1_2:18413154-18413173 | None:intergenic | 30.0% |
| GTTCAAATTTCAAAGTTGGA+AGG | - | chr1_2:18413210-18413229 | None:intergenic | 30.0% | |
| ! | CAAAGAGGTCTAAAATAAGA+AGG | + | chr1_2:18413229-18413248 | Msa0060630:intron | 30.0% |
| CTTTATCCTATTTCAGACTA+TGG | + | chr1_2:18413360-18413379 | Msa0060630:intron | 30.0% | |
| AAACCCTGTAAACTTTAATG+TGG | + | chr1_2:18413639-18413658 | Msa0060630:CDS | 30.0% | |
| TGTCCACATTAAAGTTTACA+GGG | - | chr1_2:18413645-18413664 | None:intergenic | 30.0% | |
| TTGTCCACATTAAAGTTTAC+AGG | - | chr1_2:18413646-18413665 | None:intergenic | 30.0% | |
| TAGCATAAAGAGAATGGAAA+AGG | + | chr1_2:18413750-18413769 | Msa0060630:CDS | 30.0% | |
| GACAATTACAAGATGTATGA+AGG | + | chr1_2:18413884-18413903 | Msa0060630:intron | 30.0% | |
| AACTGAATGAATAGGTGATT+AGG | + | chr1_2:18414080-18414099 | Msa0060630:intron | 30.0% | |
| ACAAATGCTGACAAAAATTC+AGG | - | chr1_2:18414256-18414275 | None:intergenic | 30.0% | |
| ! | GTCAGCATTTGTCTTTTAAA+TGG | + | chr1_2:18414264-18414283 | Msa0060630:intron | 30.0% |
| TTCTTGGTACATTATTTCCA+TGG | + | chr1_2:18414404-18414423 | Msa0060630:intron | 30.0% | |
| TCTTGGTACATTATTTCCAT+GGG | + | chr1_2:18414405-18414424 | Msa0060630:intron | 30.0% | |
| ! | GGTACATACCATTTGTTAAA+AGG | + | chr1_2:18414427-18414446 | Msa0060630:intron | 30.0% |
| ! | GTTATATGTTCTCTCGTTTT+TGG | + | chr1_2:18414593-18414612 | Msa0060630:intron | 30.0% |
| CGAATTCTATATACTTTCCT+TGG | + | chr1_2:18414618-18414637 | Msa0060630:intron | 30.0% | |
| GTGTTAAGCAAATATTTCCA+AGG | - | chr1_2:18414638-18414657 | None:intergenic | 30.0% | |
| ! | TCTTTTGTCAATGCTCTTTT+AGG | + | chr1_2:18414763-18414782 | Msa0060630:intron | 30.0% |
| ! | TTTTCAACTTCCCTTTTATG+GGG | - | chr1_2:18414995-18415014 | None:intergenic | 30.0% |
| ! | CTTTTCAACTTCCCTTTTAT+GGG | - | chr1_2:18414996-18415015 | None:intergenic | 30.0% |
| ! | ACTTTTCAACTTCCCTTTTA+TGG | - | chr1_2:18414997-18415016 | None:intergenic | 30.0% |
| ! | AGAAAACTGATGATGAAATC+TGG | + | chr1_2:18415076-18415095 | Msa0060630:intron | 30.0% |
| ! | GAAAACTGATGATGAAATCT+GGG | + | chr1_2:18415077-18415096 | Msa0060630:intron | 30.0% |
| ! | AAAACTGATGATGAAATCTG+GGG | + | chr1_2:18415078-18415097 | Msa0060630:intron | 30.0% |
| AAATAGAAAGAGAAGGTTTC+TGG | - | chr1_2:18415141-18415160 | None:intergenic | 30.0% | |
| TAGTAGGAAATAGAAAGAGA+AGG | - | chr1_2:18415148-18415167 | None:intergenic | 30.0% | |
| !!! | GATTTTCCTTTTGTTGTTCA+TGG | + | chr1_2:18415836-18415855 | Msa0060630:intron | 30.0% |
| TTTGATTAAGAAGACCACAT+AGG | - | chr1_2:18416198-18416217 | None:intergenic | 30.0% | |
| GGAAAATACTAATGGAGTAA+AGG | - | chr1_2:18416521-18416540 | None:intergenic | 30.0% | |
| GCATCATTAAACAAGATAAG+AGG | - | chr1_2:18416570-18416589 | None:intergenic | 30.0% | |
| ! | CTTATCTTGTTTAATGATGC+AGG | + | chr1_2:18416570-18416589 | Msa0060630:intron | 30.0% |
| ATTAAGCAATCATTTCCTAG+GGG | - | chr1_2:18416770-18416789 | None:intergenic | 30.0% | |
| TATTTATCAGACTATGTGCA+GGG | + | chr1_2:18416903-18416922 | Msa0060630:intron | 30.0% | |
| GGGACTCTCAATAAAATTAA+AGG | - | chr1_2:18417025-18417044 | None:intergenic | 30.0% | |
| ATGTGGTCTGAATATTGTTT+AGG | + | chr1_2:18417058-18417077 | Msa0060630:intron | 30.0% | |
| TGTGGTCTGAATATTGTTTA+GGG | + | chr1_2:18417059-18417078 | Msa0060630:intron | 30.0% | |
| ! | ACACTACAAACCAACTTTTA+AGG | - | chr1_2:18417096-18417115 | None:intergenic | 30.0% |
| ! | TATATGTGTCCCTTATTTGT+TGG | + | chr1_2:18417154-18417173 | Msa0060630:intron | 30.0% |
| ! | ATATGTGTCCCTTATTTGTT+GGG | + | chr1_2:18417155-18417174 | Msa0060630:intron | 30.0% |
| CCTCAATAGTGTTTATAAGT+GGG | + | chr1_2:18417399-18417418 | Msa0060630:intron | 30.0% | |
| CATTAGAGATAAGGTCTAAA+TGG | + | chr1_2:18417593-18417612 | Msa0060630:intron | 30.0% | |
| AAAACTTGATTGCAAGTTAG+AGG | + | chr1_2:18417643-18417662 | Msa0060630:intron | 30.0% | |
| AAGTAATTTACTTAGCCATG+TGG | - | chr1_2:18417973-18417992 | None:intergenic | 30.0% | |
| !!! | CATGCGTCTTTTTTTTATAG+TGG | + | chr1_2:18418013-18418032 | Msa0060630:intron | 30.0% |
| GAAAGAGCTACAATTCAAAT+AGG | - | chr1_2:18418077-18418096 | None:intergenic | 30.0% | |
| ! | ATTATTGTTTTCATCTGCTC+AGG | + | chr1_2:18418216-18418235 | Msa0060630:intron | 30.0% |
| TTAAAAAACAGCTGATTACC+TGG | - | chr1_2:18418295-18418314 | None:intergenic | 30.0% | |
| ! | AAGTCTGAACCAGTTTTTAT+GGG | - | chr1_2:18418584-18418603 | None:intergenic | 30.0% |
| ! | AAAGTCTGAACCAGTTTTTA+TGG | - | chr1_2:18418585-18418604 | None:intergenic | 30.0% |
| ! | TAAAAACTGGTTCAGACTTT+AGG | + | chr1_2:18418585-18418604 | Msa0060630:intron | 30.0% |
| ! | AAAAACTGGTTCAGACTTTA+GGG | + | chr1_2:18418586-18418605 | Msa0060630:intron | 30.0% |
| TTTCTGATTCTCTGTGTATT+GGG | - | chr1_2:18418679-18418698 | None:intergenic | 30.0% | |
| ! | TTTTCTGATTCTCTGTGTAT+TGG | - | chr1_2:18418680-18418699 | None:intergenic | 30.0% |
| ! | TTTTCTGATTCTCTGTCTAT+TGG | - | chr1_2:18418706-18418725 | None:intergenic | 30.0% |
| TAACATGTACTTTCCCAATT+GGG | + | chr1_2:18418730-18418749 | Msa0060630:intron | 30.0% | |
| AATATTCGTCGATACTAGTA+AGG | + | chr1_2:18418776-18418795 | Msa0060630:intron | 30.0% | |
| CTATGATAAACCTTCCATAT+AGG | - | chr1_2:18418811-18418830 | None:intergenic | 30.0% | |
| CTATATGGAAGGTTTATCAT+AGG | + | chr1_2:18418809-18418828 | Msa0060630:intron | 30.0% | |
| GAAATGAGGTAAGAAAAATG+AGG | + | chr1_2:18418838-18418857 | Msa0060630:intron | 30.0% | |
| ! | ATGTGTAATGGGAAGTTATA+AGG | + | chr1_2:18418894-18418913 | Msa0060630:intron | 30.0% |
| TTATAAGGAATAATGAGCGT+GGG | + | chr1_2:18418909-18418928 | Msa0060630:intron | 30.0% | |
| ATTCTTGAATTCAATACGAG+AGG | + | chr1_2:18418942-18418961 | Msa0060630:intron | 30.0% | |
| AATTTCTCGCAAATTGAACA+GGG | - | chr1_2:18419107-18419126 | None:intergenic | 30.0% | |
| GTTACTAAATCCAATTGACT+TGG | + | chr1_2:18419269-18419288 | Msa0060630:intron | 30.0% | |
| GAGGAATGAACACTAATATA+AGG | + | chr1_2:18419291-18419310 | Msa0060630:intron | 30.0% | |
| !! | GATAAGACTTTGTTGTTGTT+TGG | + | chr1_2:18419394-18419413 | Msa0060630:intron | 30.0% |
| ! | TTTGATTTCCATGGAATATC+AGG | + | chr1_2:18419720-18419739 | Msa0060630:three_prime_UTR | 30.0% |
| TTGATTTCCATGGAATATCA+GGG | + | chr1_2:18419721-18419740 | Msa0060630:three_prime_UTR | 30.0% | |
| ! | TTTTGCAGCTTCAAGCTTTA+CGG | - | chr1_2:18411374-18411393 | None:intergenic | 35.0% |
| AAAGCTTGAAGCTGCAAAAA+TGG | + | chr1_2:18411375-18411394 | Msa0060630:exon | 35.0% | |
| !! | AAAATGGTGGGTTTACCTTA+TGG | + | chr1_2:18411391-18411410 | Msa0060630:exon | 35.0% |
| AGCATAGATTGGATTCCATA+AGG | - | chr1_2:18411409-18411428 | None:intergenic | 35.0% | |
| ATCCAATCTATGCTCAAAGA+AGG | + | chr1_2:18411415-18411434 | Msa0060630:CDS | 35.0% | |
| !!! | AGCATCGATGTTTTTGAGAA+CGG | - | chr1_2:18411470-18411489 | None:intergenic | 35.0% |
| !! | TACACTTTGTGAGAGTGTTT+GGG | - | chr1_2:18411780-18411799 | None:intergenic | 35.0% |
| !! | ATACACTTTGTGAGAGTGTT+TGG | - | chr1_2:18411781-18411800 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr1_2:18412039-18412058 | Msa0060630:intron | 35.0% |
| TTAAGTTAGCCAATCCTAAC+AGG | + | chr1_2:18412164-18412183 | Msa0060630:intron | 35.0% | |
| AAAACCAAAATCTTAGCAGC+AGG | - | chr1_2:18412331-18412350 | None:intergenic | 35.0% | |
| !!! | TGCTGCTAAGATTTTGGTTT+TGG | + | chr1_2:18412330-18412349 | Msa0060630:CDS | 35.0% |
| !!! | CTAAGATTTTGGTTTTGGCT+GGG | + | chr1_2:18412335-18412354 | Msa0060630:CDS | 35.0% |
| AAAGCTCAACAAGAGGAAAT+TGG | + | chr1_2:18412358-18412377 | Msa0060630:CDS | 35.0% | |
| TATCCACTGATAATCTCACT+AGG | - | chr1_2:18412463-18412482 | None:intergenic | 35.0% | |
| ATATACCAAAGCCATTGCTA+AGG | + | chr1_2:18412480-18412499 | Msa0060630:CDS | 35.0% | |
| AACCTAACAAACCTTAGCAA+TGG | - | chr1_2:18412494-18412513 | None:intergenic | 35.0% | |
| TTCGATTGATCCAAAATGGA+TGG | + | chr1_2:18412525-18412544 | Msa0060630:intron | 35.0% | |
| AAAAAAGCTGTCTTTGTGAG+AGG | + | chr1_2:18412698-18412717 | Msa0060630:intron | 35.0% | |
| ! | TAGATATCTGCTGTTTGACA+AGG | + | chr1_2:18412804-18412823 | Msa0060630:intron | 35.0% |
| !! | TTTTCTGTTGGATGGATTTG+GGG | + | chr1_2:18413072-18413091 | Msa0060630:intron | 35.0% |
| ! | CGCTAAACTATATTGGTTAG+AGG | - | chr1_2:18413296-18413315 | None:intergenic | 35.0% |
| GAGAGAGAGAGAAAAAAGTA+TGG | - | chr1_2:18413334-18413353 | None:intergenic | 35.0% | |
| !! | AATATTGGACGAACTTGTTG+AGG | + | chr1_2:18413384-18413403 | Msa0060630:CDS | 35.0% |
| !! | AAATAACTTGCTCCTTGTCA+CGG | - | chr1_2:18413432-18413451 | None:intergenic | 35.0% |
| ! | TACATTTTCCAAACAAAGGG+CGG | - | chr1_2:18413595-18413614 | None:intergenic | 35.0% |
| ! | GCCTACATTTTCCAAACAAA+GGG | - | chr1_2:18413598-18413617 | None:intergenic | 35.0% |
| ! | TGCCTACATTTTCCAAACAA+AGG | - | chr1_2:18413599-18413618 | None:intergenic | 35.0% |
| TGCGTAATAGTACAGTTGTT+CGG | + | chr1_2:18413698-18413717 | Msa0060630:CDS | 35.0% | |
| !! | TGTTGGTAGCATAAAGAGAA+TGG | + | chr1_2:18413744-18413763 | Msa0060630:CDS | 35.0% |
| AAAGAGAATGGAAAAGGCAA+AGG | + | chr1_2:18413756-18413775 | Msa0060630:CDS | 35.0% | |
| ! | AATATAGTAAGTCGACTCTC+CGG | - | chr1_2:18413818-18413837 | None:intergenic | 35.0% |
| ATGTATGAAGGCTATACTCT+TGG | + | chr1_2:18413896-18413915 | Msa0060630:intron | 35.0% | |
| TAATATCAAGGCTGTACTCT+TGG | + | chr1_2:18413944-18413963 | Msa0060630:intron | 35.0% | |
| TAAACGATAAATGAAGGGCA+TGG | + | chr1_2:18414025-18414044 | Msa0060630:intron | 35.0% | |
| GATGGAACAACTGAATGAAT+AGG | + | chr1_2:18414072-18414091 | Msa0060630:intron | 35.0% | |
| TGAATAGGTGATTAGGAGTT+AGG | + | chr1_2:18414087-18414106 | Msa0060630:intron | 35.0% | |
| !!! | GGAGTGTCATTTTTTAGTTG+CGG | + | chr1_2:18414108-18414127 | Msa0060630:intron | 35.0% |
| GGATGTTATTCTTCAGACTA+TGG | + | chr1_2:18414192-18414211 | Msa0060630:intron | 35.0% | |
| TTTGCTTCCAATACTACAGA+TGG | + | chr1_2:18414221-18414240 | Msa0060630:intron | 35.0% | |
| TTGCTTCCAATACTACAGAT+GGG | + | chr1_2:18414222-18414241 | Msa0060630:intron | 35.0% | |
| AAGTCTTCAATAAGCCAAGT+GGG | - | chr1_2:18414368-18414387 | None:intergenic | 35.0% | |
| CTTGGTACATTATTTCCATG+GGG | + | chr1_2:18414406-18414425 | Msa0060630:intron | 35.0% | |
| GGGAATATGTAACAGAAGTA+AGG | + | chr1_2:18414448-18414467 | Msa0060630:intron | 35.0% | |
| TAACAGAAGTAAGGAATGCT+TGG | + | chr1_2:18414457-18414476 | Msa0060630:intron | 35.0% | |
| AGATCTGCAATAGCATATCA+TGG | - | chr1_2:18414720-18414739 | None:intergenic | 35.0% | |
| ACATCTGCAACTGAAACTAA+AGG | + | chr1_2:18414812-18414831 | Msa0060630:CDS | 35.0% | |
| TTTGTGTCTAAACAAGCTAG+AGG | + | chr1_2:18414956-18414975 | Msa0060630:intron | 35.0% | |
| TTGAAAAGTGATTTCGTAGC+AGG | + | chr1_2:18415008-18415027 | Msa0060630:intron | 35.0% | |
| TGGCAGTGTATTTCAATCAA+TGG | + | chr1_2:18415264-18415283 | Msa0060630:intron | 35.0% | |
| GGCAGTGTATTTCAATCAAT+GGG | + | chr1_2:18415265-18415284 | Msa0060630:intron | 35.0% | |
| ATCTGTAGATTCCAACAGAA+AGG | + | chr1_2:18415351-18415370 | Msa0060630:intron | 35.0% | |
| ! | AACTTAAGACAGGTTTGGTA+GGG | - | chr1_2:18415390-18415409 | None:intergenic | 35.0% |
| CTAAAGTTGGAACTTAAGAC+AGG | - | chr1_2:18415400-18415419 | None:intergenic | 35.0% | |
| AGGGAAAACCATGAAAACAA+AGG | + | chr1_2:18415621-18415640 | Msa0060630:intron | 35.0% | |
| !!! | AAGTAGTGCCTTTGTTTTCA+TGG | - | chr1_2:18415632-18415651 | None:intergenic | 35.0% |
| GAACAACAAAAGGAAAATCC+CGG | - | chr1_2:18415835-18415854 | None:intergenic | 35.0% | |
| TAAAGTAGAAGAGCTCATCA+AGG | + | chr1_2:18415971-18415990 | Msa0060630:CDS | 35.0% | |
| ATTTGATGTGTGATAGCATG+AGG | - | chr1_2:18416116-18416135 | None:intergenic | 35.0% | |
| ATGCTATGAATCTACCTATG+TGG | + | chr1_2:18416181-18416200 | Msa0060630:intron | 35.0% | |
| AATTCATGCTTGTAGGCTTA+TGG | + | chr1_2:18416217-18416236 | Msa0060630:intron | 35.0% | |
| CAACATATCCAAGATCATCT+GGG | - | chr1_2:18416409-18416428 | None:intergenic | 35.0% | |
| TCAACATATCCAAGATCATC+TGG | - | chr1_2:18416410-18416429 | None:intergenic | 35.0% | |
| !! | TGTTGATTCTGTTTCAGTTG+AGG | + | chr1_2:18416424-18416443 | Msa0060630:CDS | 35.0% |
| TCTGTTTCAGTTGAGGAAAT+TGG | + | chr1_2:18416431-18416450 | Msa0060630:CDS | 35.0% | |
| !! | ATTGAAAGAGCAGTTGATGA+TGG | + | chr1_2:18416676-18416695 | Msa0060630:CDS | 35.0% |
| CTATTTATCAGACTATGTGC+AGG | + | chr1_2:18416902-18416921 | Msa0060630:intron | 35.0% | |
| TGAAATTGAGTTAGCCAAGA+GGG | + | chr1_2:18416957-18416976 | Msa0060630:intron | 35.0% | |
| ! | TTTTATTGAGAGTCCCACAT+TGG | + | chr1_2:18417029-18417048 | Msa0060630:intron | 35.0% |
| ACCACATCATTAACCAATGT+GGG | - | chr1_2:18417045-18417064 | None:intergenic | 35.0% | |
| GTGGTCTGAATATTGTTTAG+GGG | + | chr1_2:18417060-18417079 | Msa0060630:intron | 35.0% | |
| TGGTCTGAATATTGTTTAGG+GGG | + | chr1_2:18417061-18417080 | Msa0060630:intron | 35.0% | |
| !!! | CAAACCAACTTTTAAGGTGA+GGG | - | chr1_2:18417090-18417109 | None:intergenic | 35.0% |
| !!! | ACAAACCAACTTTTAAGGTG+AGG | - | chr1_2:18417091-18417110 | None:intergenic | 35.0% |
| ! | GGTGGTCTTTTATAGATTCT+GGG | - | chr1_2:18417128-18417147 | None:intergenic | 35.0% |
| ! | TGGTGGTCTTTTATAGATTC+TGG | - | chr1_2:18417129-18417148 | None:intergenic | 35.0% |
| TAAGGGACACATATAAACTC+TGG | - | chr1_2:18417149-18417168 | None:intergenic | 35.0% | |
| TCAGATGTATGTTCAGTCTT+CGG | + | chr1_2:18417209-18417228 | Msa0060630:intron | 35.0% | |
| ! | CTTTAGCGGTTATAAGTTGA+GGG | + | chr1_2:18417276-18417295 | Msa0060630:intron | 35.0% |
| GCCTCAATAGTGTTTATAAG+TGG | + | chr1_2:18417398-18417417 | Msa0060630:intron | 35.0% | |
| CCCACTTATAAACACTATTG+AGG | - | chr1_2:18417402-18417421 | None:intergenic | 35.0% | |
| AAAATCCTCACCGAACAAAT+AGG | + | chr1_2:18417424-18417443 | Msa0060630:intron | 35.0% | |
| !! | ACCGAACAAATAGGTTTTGT+GGG | + | chr1_2:18417433-18417452 | Msa0060630:intron | 35.0% |
| GAATTGTCCCAAAACTAAGA+TGG | + | chr1_2:18417459-18417478 | Msa0060630:intron | 35.0% | |
| TGAGATGATTCCTAGAACAT+TGG | + | chr1_2:18417811-18417830 | Msa0060630:CDS | 35.0% | |
| CATCATTTGCCTTAAGTAAG+GGG | - | chr1_2:18418042-18418061 | None:intergenic | 35.0% | |
| CCATCATTTGCCTTAAGTAA+GGG | - | chr1_2:18418043-18418062 | None:intergenic | 35.0% | |
| TCCATCATTTGCCTTAAGTA+AGG | - | chr1_2:18418044-18418063 | None:intergenic | 35.0% | |
| ! | ATGTGTTCAATCTTTAGGGA+GGG | - | chr1_2:18418375-18418394 | None:intergenic | 35.0% |
| ! | CACATGATTTTGTCTTCCTA+AGG | + | chr1_2:18418390-18418409 | Msa0060630:intron | 35.0% |
| TTTATCCAGTTGTGATCCTT+AGG | - | chr1_2:18418409-18418428 | None:intergenic | 35.0% | |
| TTCTCTTATAGCTCAAAGCA+AGG | - | chr1_2:18418656-18418675 | None:intergenic | 35.0% | |
| CTAACATGTACTTTCCCAAT+TGG | + | chr1_2:18418729-18418748 | Msa0060630:intron | 35.0% | |
| AGAGAGGGATAATGTGTAAT+GGG | + | chr1_2:18418883-18418902 | Msa0060630:intron | 35.0% | |
| GTTATAAGGAATAATGAGCG+TGG | + | chr1_2:18418908-18418927 | Msa0060630:intron | 35.0% | |
| TATAAGGAATAATGAGCGTG+GGG | + | chr1_2:18418910-18418929 | Msa0060630:intron | 35.0% | |
| ATCACCAAAAGTCCATTGAT+TGG | + | chr1_2:18418965-18418984 | Msa0060630:intron | 35.0% | |
| ! | AAAAGTCCATTGATTGGTGA+GGG | + | chr1_2:18418971-18418990 | Msa0060630:intron | 35.0% |
| GAATTTCTCGCAAATTGAAC+AGG | - | chr1_2:18419108-18419127 | None:intergenic | 35.0% | |
| TCAATTTGCGAGAAATTCTC+AGG | + | chr1_2:18419110-18419129 | Msa0060630:intron | 35.0% | |
| CAATTTGCGAGAAATTCTCA+GGG | + | chr1_2:18419111-18419130 | Msa0060630:intron | 35.0% | |
| !! | ACTAAATCCAATTGACTTGG+AGG | + | chr1_2:18419272-18419291 | Msa0060630:intron | 35.0% |
| ! | AAAGTCTTATCCCACTAAGT+GGG | - | chr1_2:18419385-18419404 | None:intergenic | 35.0% |
| TCAGATTATTATGGCGAAAC+CGG | + | chr1_2:18419523-18419542 | Msa0060630:intron | 35.0% | |
| ACATTATGTCCTACTACACT+TGG | + | chr1_2:18419639-18419658 | Msa0060630:three_prime_UTR | 35.0% | |
| ATTACATCCCTGATATTCCA+TGG | - | chr1_2:18419731-18419750 | None:intergenic | 35.0% | |
| GCTTTCTCCATATCATTGTA+AGG | + | chr1_2:18419913-18419932 | Msa0060630:three_prime_UTR | 35.0% | |
| TGACAGTCCTTACAATGATA+TGG | - | chr1_2:18419923-18419942 | None:intergenic | 35.0% | |
| TCTCTTCATTTCGTGGGTTT+AGG | + | chr1_2:18411282-18411301 | Msa0060630:five_prime_UTR | 40.0% | |
| CTTGAAGCTGCAAAAATGGT+GGG | + | chr1_2:18411379-18411398 | Msa0060630:exon | 40.0% | |
| GACCTTCTTTGAGCATAGAT+TGG | - | chr1_2:18411420-18411439 | None:intergenic | 40.0% | |
| GAGAATGTGAAGTTAGGGTA+GGG | - | chr1_2:18411543-18411562 | None:intergenic | 40.0% | |
| TGAGAATGTGAAGTTAGGGT+AGG | - | chr1_2:18411544-18411563 | None:intergenic | 40.0% | |
| AAACAAACTAGGGACCTGTT+AGG | - | chr1_2:18412181-18412200 | None:intergenic | 40.0% | |
| ! | ACATCCTGCTGCTAAGATTT+TGG | + | chr1_2:18412324-18412343 | Msa0060630:CDS | 40.0% |
| !!! | GCTAAGATTTTGGTTTTGGC+TGG | + | chr1_2:18412334-18412353 | Msa0060630:CDS | 40.0% |
| CAACAAGAGGAAATTGGTGA+TGG | + | chr1_2:18412364-18412383 | Msa0060630:CDS | 40.0% | |
| ! | ATGGTGCTGAAGAGCTTATT+AGG | + | chr1_2:18412425-18412444 | Msa0060630:CDS | 40.0% |
| TGCTGAAGAGCTTATTAGGA+TGG | + | chr1_2:18412429-18412448 | Msa0060630:CDS | 40.0% | |
| GCTGAAGAGCTTATTAGGAT+GGG | + | chr1_2:18412430-18412449 | Msa0060630:CDS | 40.0% | |
| CATCCTAGTGAGATTATCAG+TGG | + | chr1_2:18412457-18412476 | Msa0060630:CDS | 40.0% | |
| ACAAACCTTAGCAATGGCTT+TGG | - | chr1_2:18412488-18412507 | None:intergenic | 40.0% | |
| ! | AGCCATTGCTAAGGTTTGTT+AGG | + | chr1_2:18412489-18412508 | Msa0060630:intron | 40.0% |
| !! | AGCGTAGCAGAGTTTTAACA+AGG | - | chr1_2:18412766-18412785 | None:intergenic | 40.0% |
| GTCAAACAGCAGATATCTAG+CGG | - | chr1_2:18412803-18412822 | None:intergenic | 40.0% | |
| TTGGTTAGAGGAGTTTGCAA+GGG | - | chr1_2:18413284-18413303 | None:intergenic | 40.0% | |
| ATTGGTTAGAGGAGTTTGCA+AGG | - | chr1_2:18413285-18413304 | None:intergenic | 40.0% | |
| GTGAGTTTATCCTCATTACC+CGG | + | chr1_2:18413523-18413542 | Msa0060630:intron | 40.0% | |
| CATAGTAAAACCGGGTAATG+AGG | - | chr1_2:18413536-18413555 | None:intergenic | 40.0% | |
| ! | GCCCTTTGTTTGGAAAATGT+AGG | + | chr1_2:18413594-18413613 | Msa0060630:intron | 40.0% |
| GCGTAATAGTACAGTTGTTC+GGG | + | chr1_2:18413699-18413718 | Msa0060630:CDS | 40.0% | |
| CGTAATAGTACAGTTGTTCG+GGG | + | chr1_2:18413700-18413719 | Msa0060630:CDS | 40.0% | |
| !! | GTTCTGAGAAATGATGCTGT+TGG | + | chr1_2:18413727-18413746 | Msa0060630:CDS | 40.0% |
| !!! | TGAGACTTTTAGGGTTTCAC+CGG | + | chr1_2:18413796-18413815 | Msa0060630:intron | 40.0% |
| AGATAGCCCATCTGTAGTAT+TGG | - | chr1_2:18414231-18414250 | None:intergenic | 40.0% | |
| AGTCTTCAATAAGCCAAGTG+GGG | - | chr1_2:18414367-18414386 | None:intergenic | 40.0% | |
| GAAGTCTTCAATAAGCCAAG+TGG | - | chr1_2:18414369-18414388 | None:intergenic | 40.0% | |
| AACAAATGGTATGTACCCCA+TGG | - | chr1_2:18414424-18414443 | None:intergenic | 40.0% | |
| GGAAGACAAGACAACTAGTA+TGG | - | chr1_2:18414522-18414541 | None:intergenic | 40.0% | |
| TGCAATAGCATATCATGGTG+AGG | - | chr1_2:18414715-18414734 | None:intergenic | 40.0% | |
| TCATACTGTGTCTTGTACTG+AGG | + | chr1_2:18414740-18414759 | Msa0060630:intron | 40.0% | |
| !!! | TTTTAGGTTGCTGTGTTTGC+TGG | + | chr1_2:18414779-18414798 | Msa0060630:intron | 40.0% |
| TCTCATACATTCTGCTGAAC+AGG | + | chr1_2:18414841-18414860 | Msa0060630:CDS | 40.0% | |
| AACTACAAGCACACCAAAGA+AGG | + | chr1_2:18415301-18415320 | Msa0060630:intron | 40.0% | |
| ATTGATGTTCCAGCCTTCTT+TGG | - | chr1_2:18415317-18415336 | None:intergenic | 40.0% | |
| ! | GAACTTAAGACAGGTTTGGT+AGG | - | chr1_2:18415391-18415410 | None:intergenic | 40.0% |
| GTTGGAACTTAAGACAGGTT+TGG | - | chr1_2:18415395-18415414 | None:intergenic | 40.0% | |
| TCGGTCATCATTGATATCAC+AGG | - | chr1_2:18415447-18415466 | None:intergenic | 40.0% | |
| ACAGAACATTGCACGTGTTT+CGG | - | chr1_2:18415466-18415485 | None:intergenic | 40.0% | |
| ACACGTGCAATGTTCTGTTT+AGG | + | chr1_2:18415468-18415487 | Msa0060630:intron | 40.0% | |
| !! | GAAAAGTGTTTAGAAGGGCA+GGG | + | chr1_2:18415499-18415518 | Msa0060630:intron | 40.0% |
| !! | AAAAGTGTTTAGAAGGGCAG+GGG | + | chr1_2:18415500-18415519 | Msa0060630:intron | 40.0% |
| AGGGGAATCAAAGGTAGTAT+TGG | + | chr1_2:18415581-18415600 | Msa0060630:intron | 40.0% | |
| ! | GGAATCAAAGGTAGTATTGG+TGG | + | chr1_2:18415584-18415603 | Msa0060630:intron | 40.0% |
| ! | TCATGGTCAGAGCTTTTGTT+TGG | + | chr1_2:18415683-18415702 | Msa0060630:intron | 40.0% |
| ! | ATCAAGGCTGTAGTTGATTC+TGG | + | chr1_2:18415987-18416006 | Msa0060630:CDS | 40.0% |
| TAGCTACAGAACCAGTTGTA+CGG | - | chr1_2:18416283-18416302 | None:intergenic | 40.0% | |
| !! | TACAACTGGTTCTGTAGCTA+TGG | + | chr1_2:18416283-18416302 | Msa0060630:CDS | 40.0% |
| TATCCAAGATCATCTGGGTT+TGG | - | chr1_2:18416404-18416423 | None:intergenic | 40.0% | |
| GTTTCAGTTGAGGAAATTGG+TGG | + | chr1_2:18416434-18416453 | Msa0060630:CDS | 40.0% | |
| GTAGCAACTGTTGTCTTAAG+AGG | + | chr1_2:18416628-18416647 | Msa0060630:CDS | 40.0% | |
| TGATGGAGTGAACACTTACA+AGG | + | chr1_2:18416693-18416712 | Msa0060630:CDS | 40.0% | |
| CTGAAATTGAGTTAGCCAAG+AGG | + | chr1_2:18416956-18416975 | Msa0060630:intron | 40.0% | |
| ! | GGTGAAAGAGTTTTCCTTCA+AGG | + | chr1_2:18416978-18416997 | Msa0060630:intron | 40.0% |
| ! | AGTTTTCCTTCAAGGAGACA+GGG | + | chr1_2:18416986-18417005 | Msa0060630:intron | 40.0% |
| ! | TCCCACATTGGTTAATGATG+TGG | + | chr1_2:18417041-18417060 | Msa0060630:intron | 40.0% |
| GACCACATCATTAACCAATG+TGG | - | chr1_2:18417046-18417065 | None:intergenic | 40.0% | |
| !! | GTTGGTTTGTAGTGTTGAGT+TGG | + | chr1_2:18417101-18417120 | Msa0060630:intron | 40.0% |
| GAACAATGTGGCCTGATAAT+GGG | - | chr1_2:18417184-18417203 | None:intergenic | 40.0% | |
| TGAACAATGTGGCCTGATAA+TGG | - | chr1_2:18417185-18417204 | None:intergenic | 40.0% | |
| TCCCACATTGAATAGTGACA+TGG | + | chr1_2:18417252-18417271 | Msa0060630:intron | 40.0% | |
| GCCATGTCACTATTCAATGT+GGG | - | chr1_2:18417256-18417275 | None:intergenic | 40.0% | |
| AATAGTGACATGGCCTTTAG+CGG | + | chr1_2:18417262-18417281 | Msa0060630:intron | 40.0% | |
| CCTCAACTTATAACCGCTAA+AGG | - | chr1_2:18417278-18417297 | None:intergenic | 40.0% | |
| CCTTTAGCGGTTATAAGTTG+AGG | + | chr1_2:18417275-18417294 | Msa0060630:intron | 40.0% | |
| AATGTCTAGTCATGAGTGTG+AGG | + | chr1_2:18417338-18417357 | Msa0060630:intron | 40.0% | |
| ATGTCTAGTCATGAGTGTGA+GGG | + | chr1_2:18417339-18417358 | Msa0060630:intron | 40.0% | |
| TATGTTGAGAGACCGACATT+TGG | + | chr1_2:18417365-18417384 | Msa0060630:intron | 40.0% | |
| ACCGACATTTGGCTGTAATA+AGG | + | chr1_2:18417376-18417395 | Msa0060630:intron | 40.0% | |
| ! | GCCTTATTACAGCCAAATGT+CGG | - | chr1_2:18417380-18417399 | None:intergenic | 40.0% |
| ! | CAAAACCTATTTGTTCGGTG+AGG | - | chr1_2:18417432-18417451 | None:intergenic | 40.0% |
| ! | CACCGAACAAATAGGTTTTG+TGG | + | chr1_2:18417432-18417451 | Msa0060630:intron | 40.0% |
| CCCCACAAAACCTATTTGTT+CGG | - | chr1_2:18417437-18417456 | None:intergenic | 40.0% | |
| !! | CCGAACAAATAGGTTTTGTG+GGG | + | chr1_2:18417434-18417453 | Msa0060630:intron | 40.0% |
| TGGTGCACGTATAATATGGT+GGG | - | chr1_2:18417516-18417535 | None:intergenic | 40.0% | |
| TTGGTGCACGTATAATATGG+TGG | - | chr1_2:18417517-18417536 | None:intergenic | 40.0% | |
| !! | GACTTGGTGCACGTATAATA+TGG | - | chr1_2:18417520-18417539 | None:intergenic | 40.0% |
| AAGTCCAAGAATACCGAGAA+CGG | + | chr1_2:18417535-18417554 | Msa0060630:intron | 40.0% | |
| CAAGTCTCGCATTAGAGATA+AGG | + | chr1_2:18417584-18417603 | Msa0060630:intron | 40.0% | |
| GATGATTCCTAGAACATTGG+CGG | + | chr1_2:18417814-18417833 | Msa0060630:CDS | 40.0% | |
| ATGTCACAACCACACATGTT+TGG | + | chr1_2:18417942-18417961 | Msa0060630:CDS | 40.0% | |
| TGTCACAACCACACATGTTT+GGG | + | chr1_2:18417943-18417962 | Msa0060630:CDS | 40.0% | |
| TAGTGGAAACCCCTTACTTA+AGG | + | chr1_2:18418030-18418049 | Msa0060630:intron | 40.0% | |
| CCCTTACTTAAGGCAAATGA+TGG | + | chr1_2:18418040-18418059 | Msa0060630:intron | 40.0% | |
| ACTTGTCATTGAATGGTACG+AGG | - | chr1_2:18418193-18418212 | None:intergenic | 40.0% | |
| ! | CATGTGTTCAATCTTTAGGG+AGG | - | chr1_2:18418376-18418395 | None:intergenic | 40.0% |
| TCAAGCCTTCCCATAAAAAC+TGG | + | chr1_2:18418572-18418591 | Msa0060630:intron | 40.0% | |
| ! | CTGAACCAGTTTTTATGGGA+AGG | - | chr1_2:18418580-18418599 | None:intergenic | 40.0% |
| AGGGAGTAGCAATTAACAGA+AGG | + | chr1_2:18418605-18418624 | Msa0060630:intron | 40.0% | |
| TCGATACTAGTAAGGAGAGT+AGG | + | chr1_2:18418784-18418803 | Msa0060630:intron | 40.0% | |
| GAAAAATGAGGAAGCTGAGT+TGG | + | chr1_2:18418850-18418869 | Msa0060630:intron | 40.0% | |
| GAGAGAGGGATAATGTGTAA+TGG | + | chr1_2:18418882-18418901 | Msa0060630:intron | 40.0% | |
| !! | CTCACCAATCAATGGACTTT+TGG | - | chr1_2:18418972-18418991 | None:intergenic | 40.0% |
| ! | CAAAAGTCCATTGATTGGTG+AGG | + | chr1_2:18418970-18418989 | Msa0060630:intron | 40.0% |
| ! | AAAGTCCATTGATTGGTGAG+GGG | + | chr1_2:18418972-18418991 | Msa0060630:intron | 40.0% |
| ATCAGCTCACCAAAAGTCTA+AGG | - | chr1_2:18418999-18419018 | None:intergenic | 40.0% | |
| GTTCATTCCTCCAAGTCAAT+TGG | - | chr1_2:18419282-18419301 | None:intergenic | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | chr1_2:18419384-18419403 | None:intergenic | 40.0% |
| ! | CAAAGTCTTATCCCACTAAG+TGG | - | chr1_2:18419386-18419405 | None:intergenic | 40.0% |
| !! | GTGAGAACTGACTCTTGTTT+TGG | + | chr1_2:18419600-18419619 | Msa0060630:three_prime_UTR | 40.0% |
| ! | CTGTCATTTATCAAGCACAG+TGG | + | chr1_2:18419937-18419956 | Msa0060630:three_prime_UTR | 40.0% |
| CACAACATAACTGCAGCAGA+GGG | + | chr1_2:18411314-18411333 | Msa0060630:five_prime_UTR | 45.0% | |
| GCTTGAAGCTGCAAAAATGG+TGG | + | chr1_2:18411378-18411397 | Msa0060630:exon | 45.0% | |
| GAAGGTCACAAACATCTCTC+TGG | + | chr1_2:18411433-18411452 | Msa0060630:CDS | 45.0% | |
| ACTATCACTCGCACTTCTCT+CGG | + | chr1_2:18411505-18411524 | Msa0060630:CDS | 45.0% | |
| GTTAGGGTAGGGTTACCATT+GGG | - | chr1_2:18411532-18411551 | None:intergenic | 45.0% | |
| AGTTAGGGTAGGGTTACCAT+TGG | - | chr1_2:18411533-18411552 | None:intergenic | 45.0% | |
| AACTAGGGACCTGTTAGGAT+TGG | - | chr1_2:18412176-18412195 | None:intergenic | 45.0% | |
| CAGAGAGTCAGAGCAAATTG+AGG | - | chr1_2:18412928-18412947 | None:intergenic | 45.0% | |
| ! | CAATTTGCTCTGACTCTCTG+AGG | + | chr1_2:18412928-18412947 | Msa0060630:intron | 45.0% |
| ! | CTCTGACTCTCTGAGGATAT+TGG | + | chr1_2:18412935-18412954 | Msa0060630:intron | 45.0% |
| ! | GACTCTCTGAGGATATTGGA+TGG | + | chr1_2:18412939-18412958 | Msa0060630:intron | 45.0% |
| TGGATTTGGGGAGAAAGAGA+AGG | + | chr1_2:18413084-18413103 | Msa0060630:intron | 45.0% | |
| GGATTTGGGGAGAAAGAGAA+GGG | + | chr1_2:18413085-18413104 | Msa0060630:intron | 45.0% | |
| !! | TTGGACGAACTTGTTGAGGA+AGG | + | chr1_2:18413388-18413407 | Msa0060630:CDS | 45.0% |
| TGAGGAAGGTTCCGACAATA+TGG | + | chr1_2:18413402-18413421 | Msa0060630:CDS | 45.0% | |
| GTCACGGACATCCATATTGT+CGG | - | chr1_2:18413416-18413435 | None:intergenic | 45.0% | |
| CAATATGGATGTCCGTGACA+AGG | + | chr1_2:18413417-18413436 | Msa0060630:CDS | 45.0% | |
| GCTGTTGCTAGCAAGCAATT+CGG | + | chr1_2:18413466-18413485 | Msa0060630:CDS | 45.0% | |
| TTGACATTCCGCCCTTTGTT+TGG | + | chr1_2:18413584-18413603 | Msa0060630:intron | 45.0% | |
| !!! | CAGGGTTTTTTGGACACACT+TGG | - | chr1_2:18413627-18413646 | None:intergenic | 45.0% |
| TAGTACAGTTGTTCGGGGAA+TGG | + | chr1_2:18413705-18413724 | Msa0060630:CDS | 45.0% | |
| !! | CTTGTGCACAACACTGATTC+TGG | - | chr1_2:18414147-18414166 | None:intergenic | 45.0% |
| ATTCCCCACTCCCCATAAAA+GGG | + | chr1_2:18414982-18415001 | Msa0060630:intron | 45.0% | |
| ! | ACTTCCCTTTTATGGGGAGT+GGG | - | chr1_2:18414989-18415008 | None:intergenic | 45.0% |
| ! | AACTTCCCTTTTATGGGGAG+TGG | - | chr1_2:18414990-18415009 | None:intergenic | 45.0% |
| GCTACTGGATAAGATTCCAG+AGG | - | chr1_2:18415115-18415134 | None:intergenic | 45.0% | |
| !! | GAAGGTTTCTGGTTAGCTAC+TGG | - | chr1_2:18415130-18415149 | None:intergenic | 45.0% |
| !! | AAGTTCTGGGTCCTTTCTGT+TGG | - | chr1_2:18415365-18415384 | None:intergenic | 45.0% |
| GTTTGGTAGGGTGAAGTTCT+GGG | - | chr1_2:18415378-18415397 | None:intergenic | 45.0% | |
| !! | GGAAAAGTGTTTAGAAGGGC+AGG | + | chr1_2:18415498-18415517 | Msa0060630:intron | 45.0% |
| !! | AGTATTGGTGGAAGATAGCG+TGG | + | chr1_2:18415596-18415615 | Msa0060630:intron | 45.0% |
| ACTGCTGTACAAAGCTGTCA+TGG | + | chr1_2:18415666-18415685 | Msa0060630:intron | 45.0% | |
| GCTGTTATGATCTGATGTGC+CGG | + | chr1_2:18415813-18415832 | Msa0060630:intron | 45.0% | |
| CTGTTATGATCTGATGTGCC+GGG | + | chr1_2:18415814-18415833 | Msa0060630:intron | 45.0% | |
| TCCTCCGCTTACAATCACTT+GGG | - | chr1_2:18416015-18416034 | None:intergenic | 45.0% | |
| !! | TTGAGGAAATTGGTGGTGCA+AGG | + | chr1_2:18416441-18416460 | Msa0060630:CDS | 45.0% |
| !! | TGAGGAAATTGGTGGTGCAA+GGG | + | chr1_2:18416442-18416461 | Msa0060630:CDS | 45.0% |
| GTATGGCCTCTGCAAACATA+CGG | + | chr1_2:18416797-18416816 | Msa0060630:intron | 45.0% | |
| TATGGCCTCTGCAAACATAC+GGG | + | chr1_2:18416798-18416817 | Msa0060630:intron | 45.0% | |
| GGAAAACTCTTTCACCCTCT+TGG | - | chr1_2:18416974-18416993 | None:intergenic | 45.0% | |
| ! | GAGTTTTCCTTCAAGGAGAC+AGG | + | chr1_2:18416985-18417004 | Msa0060630:intron | 45.0% |
| GCAACCCTCACCTTAAAAGT+TGG | + | chr1_2:18417083-18417102 | Msa0060630:intron | 45.0% | |
| GGGACACATATAAACTCTGG+TGG | - | chr1_2:18417146-18417165 | None:intergenic | 45.0% | |
| ATGGGTGGCCCAACAAATAA+GGG | - | chr1_2:18417166-18417185 | None:intergenic | 45.0% | |
| AATGGGTGGCCCAACAAATA+AGG | - | chr1_2:18417167-18417186 | None:intergenic | 45.0% | |
| ! | CATCTGAAGCGTGAACAATG+TGG | - | chr1_2:18417196-18417215 | None:intergenic | 45.0% |
| TATGTTCAGTCTTCGGCATG+TGG | + | chr1_2:18417216-18417235 | Msa0060630:intron | 45.0% | |
| GGCCATGTCACTATTCAATG+TGG | - | chr1_2:18417257-18417276 | None:intergenic | 45.0% | |
| !! | TAATATGGTGGGTGGTCTGA+TGG | - | chr1_2:18417505-18417524 | None:intergenic | 45.0% |
| ! | TGCACGTATAATATGGTGGG+TGG | - | chr1_2:18417513-18417532 | None:intergenic | 45.0% |
| GTTCTCGGTATTCTTGGACT+TGG | - | chr1_2:18417536-18417555 | None:intergenic | 45.0% | |
| AGTCCAAGAATACCGAGAAC+GGG | + | chr1_2:18417536-18417555 | Msa0060630:intron | 45.0% | |
| AAACCCGTTCTCGGTATTCT+TGG | - | chr1_2:18417542-18417561 | None:intergenic | 45.0% | |
| ! | AACGGGTTTGAGAGGTGTAA+TGG | + | chr1_2:18417553-18417572 | Msa0060630:intron | 45.0% |
| ! | TTTGCAATGGCTCTGCAGAT+TGG | + | chr1_2:18417754-18417773 | Msa0060630:intron | 45.0% |
| GAATGCTGGGCTAAATGCAA+TGG | + | chr1_2:18417838-18417857 | Msa0060630:CDS | 45.0% | |
| !! | CGCGAAAGTTGGCATTGATT+TGG | + | chr1_2:18417901-18417920 | Msa0060630:CDS | 45.0% |
| !! | AGTTGGCATTGATTTGGACG+AGG | + | chr1_2:18417907-18417926 | Msa0060630:CDS | 45.0% |
| !! | GTTGGCATTGATTTGGACGA+GGG | + | chr1_2:18417908-18417927 | Msa0060630:CDS | 45.0% |
| !! | TTTGGACGAGGGTGTTTGTA+AGG | + | chr1_2:18417919-18417938 | Msa0060630:CDS | 45.0% |
| ! | ACATGTTTGGGATCTCCACA+TGG | + | chr1_2:18417955-18417974 | Msa0060630:CDS | 45.0% |
| ACCAGCACTTGTGACAAATG+TGG | + | chr1_2:18418127-18418146 | Msa0060630:intron | 45.0% | |
| TCCACATTTGTCACAAGTGC+TGG | - | chr1_2:18418131-18418150 | None:intergenic | 45.0% | |
| GTCTTCCTAAGGATCACAAC+TGG | + | chr1_2:18418401-18418420 | Msa0060630:intron | 45.0% | |
| GTTATCGGCAAGACCCAATT+GGG | - | chr1_2:18418746-18418765 | None:intergenic | 45.0% | |
| TGTTATCGGCAAGACCCAAT+TGG | - | chr1_2:18418747-18418766 | None:intergenic | 45.0% | |
| TAAGGAGAGTAGGCCCTATA+TGG | + | chr1_2:18418794-18418813 | Msa0060630:intron | 45.0% | |
| ! | AAATGAGGAAGCTGAGTTGG+CGG | + | chr1_2:18418853-18418872 | Msa0060630:intron | 45.0% |
| ! | AAGTCCATTGATTGGTGAGG+GGG | + | chr1_2:18418973-18418992 | Msa0060630:intron | 45.0% |
| ACTAAGTGGGGTAAGCTACA+TGG | - | chr1_2:18419372-18419391 | None:intergenic | 45.0% | |
| ATGTAGCTTACCCCACTTAG+TGG | + | chr1_2:18419371-18419390 | Msa0060630:intron | 45.0% | |
| TGTAGCTTACCCCACTTAGT+GGG | + | chr1_2:18419372-18419391 | Msa0060630:intron | 45.0% | |
| ATTATTATGGCGAAACCGGC+TGG | + | chr1_2:18419527-18419546 | Msa0060630:CDS | 45.0% | |
| TTATTATGGCGAAACCGGCT+GGG | + | chr1_2:18419528-18419547 | Msa0060630:CDS | 45.0% | |
| TCCTACTACACTTGGCAACT+TGG | + | chr1_2:18419647-18419666 | Msa0060630:three_prime_UTR | 45.0% | |
| TACACTTGGCAACTTGGCTT+GGG | + | chr1_2:18419653-18419672 | Msa0060630:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTACTT+TGG | + | chr1_2:18419328-18419347 | Msa0060630:intron | 5.0% |
| !!! | ATTTTTTTTTTTTTTATTTG+GGG | + | chr1_2:18419819-18419838 | Msa0060630:three_prime_UTR | 5.0% |
| GCACAACATAACTGCAGCAG+AGG | + | chr1_2:18411313-18411332 | Msa0060630:five_prime_UTR | 50.0% | |
| TGCAGCTTCAAGCTTTACGG+TGG | - | chr1_2:18411371-18411390 | None:intergenic | 50.0% | |
| !! | TGCGAGTGATAGTGGAGAGT+TGG | - | chr1_2:18411498-18411517 | None:intergenic | 50.0% |
| ! | GAGAGAAGTGCGAGTGATAG+TGG | - | chr1_2:18411506-18411525 | None:intergenic | 50.0% |
| TTTGCCGGCGAGTTACTTCA+TGG | + | chr1_2:18412406-18412425 | Msa0060630:CDS | 50.0% | |
| AGCACCATGAAGTAACTCGC+CGG | - | chr1_2:18412413-18412432 | None:intergenic | 50.0% | |
| GTTCGTGTCGCAAAGCTCTT+AGG | + | chr1_2:18413667-18413686 | Msa0060630:CDS | 50.0% | |
| TAAGTATCATGCGCCCCACT+TGG | + | chr1_2:18414351-18414370 | Msa0060630:intron | 50.0% | |
| ! | TAGGTTGCTGTGTTTGCTGG+TGG | + | chr1_2:18414782-18414801 | Msa0060630:intron | 50.0% |
| CATTCCCCACTCCCCATAAA+AGG | + | chr1_2:18414981-18415000 | Msa0060630:intron | 50.0% | |
| ! | CTTCCCTTTTATGGGGAGTG+GGG | - | chr1_2:18414988-18415007 | None:intergenic | 50.0% |
| TAGCTGCTAAACATGCTCGC+TGG | + | chr1_2:18415244-18415263 | Msa0060630:intron | 50.0% | |
| ACAAGCACACCAAAGAAGGC+TGG | + | chr1_2:18415305-18415324 | Msa0060630:intron | 50.0% | |
| ! | GGTTTGGTAGGGTGAAGTTC+TGG | - | chr1_2:18415379-18415398 | None:intergenic | 50.0% |
| TGTTTAGAAGGGCAGGGGAA+GGG | + | chr1_2:18415505-18415524 | Msa0060630:intron | 50.0% | |
| AGAAGGAGAGAGTGACAGAG+TGG | + | chr1_2:18415529-18415548 | Msa0060630:intron | 50.0% | |
| GAGAGAGTGACAGAGTGGAA+GGG | + | chr1_2:18415534-18415553 | Msa0060630:intron | 50.0% | |
| TGGTGGAAGATAGCGTGGAA+AGG | + | chr1_2:18415601-18415620 | Msa0060630:intron | 50.0% | |
| GGTGGAAGATAGCGTGGAAA+GGG | + | chr1_2:18415602-18415621 | Msa0060630:intron | 50.0% | |
| GGTGCCCAAGTGATTGTAAG+CGG | + | chr1_2:18416008-18416027 | Msa0060630:CDS | 50.0% | |
| CTCCTCCGCTTACAATCACT+TGG | - | chr1_2:18416016-18416035 | None:intergenic | 50.0% | |
| ATTGTAAGCGGAGGAGCAGT+AGG | + | chr1_2:18416020-18416039 | Msa0060630:CDS | 50.0% | |
| !!! | CGTCGATTTTGCCGTACAAC+TGG | + | chr1_2:18416269-18416288 | Msa0060630:CDS | 50.0% |
| CGACCAAACCCAGATGATCT+TGG | + | chr1_2:18416398-18416417 | Msa0060630:CDS | 50.0% | |
| ATGGCCTCTGCAAACATACG+GGG | + | chr1_2:18416799-18416818 | Msa0060630:intron | 50.0% | |
| ATTTCAGTTGCTGCAGCTCC+AGG | - | chr1_2:18416943-18416962 | None:intergenic | 50.0% | |
| AGCATACCCTGTCTCCTTGA+AGG | - | chr1_2:18416995-18417014 | None:intergenic | 50.0% | |
| TTGTTGGGCCACCCATTATC+AGG | + | chr1_2:18417170-18417189 | Msa0060630:intron | 50.0% | |
| !! | CAATGTGGCCTGATAATGGG+TGG | - | chr1_2:18417181-18417200 | None:intergenic | 50.0% |
| TCGTGGCCTGATAAAGGTGA+GGG | - | chr1_2:18417305-18417324 | None:intergenic | 50.0% | |
| TCACCTTTATCAGGCCACGA+GGG | + | chr1_2:18417305-18417324 | Msa0060630:intron | 50.0% | |
| ! | CATTTAAAGCGTGACCCTCG+TGG | - | chr1_2:18417322-18417341 | None:intergenic | 50.0% |
| ! | ATACCGAGAACGGGTTTGAG+AGG | + | chr1_2:18417545-18417564 | Msa0060630:intron | 50.0% |
| ACACCTCTCAAACCCGTTCT+CGG | - | chr1_2:18417551-18417570 | None:intergenic | 50.0% | |
| GCATTCTCCGCCAATGTTCT+AGG | - | chr1_2:18417824-18417843 | None:intergenic | 50.0% | |
| AGAACATTGGCGGAGAATGC+TGG | + | chr1_2:18417824-18417843 | Msa0060630:CDS | 50.0% | |
| GAACATTGGCGGAGAATGCT+GGG | + | chr1_2:18417825-18417844 | Msa0060630:CDS | 50.0% | |
| CTCTACGCAGAACATGCATC+AGG | + | chr1_2:18417875-18417894 | Msa0060630:CDS | 50.0% | |
| GCATCAGGAAACGCGAAAGT+TGG | + | chr1_2:18417890-18417909 | Msa0060630:CDS | 50.0% | |
| GTGGAGATCCCAAACATGTG+TGG | - | chr1_2:18417954-18417973 | None:intergenic | 50.0% | |
| ATGCTGCATGCACTGTGCTA+CGG | + | chr1_2:18418264-18418283 | Msa0060630:CDS | 50.0% | |
| TGGGAAGGCTTGAGTACTCA+TGG | - | chr1_2:18418565-18418584 | None:intergenic | 50.0% | |
| TGGGTCTTGCCGATAACAGT+AGG | + | chr1_2:18418749-18418768 | Msa0060630:intron | 50.0% | |
| GAGAGTAGGCCCTATATGGA+AGG | + | chr1_2:18418798-18418817 | Msa0060630:intron | 50.0% | |
| AAGTGGGGTAAGCTACATGG+AGG | - | chr1_2:18419369-18419388 | None:intergenic | 50.0% | |
| TATTATGGCGAAACCGGCTG+GGG | + | chr1_2:18419529-18419548 | Msa0060630:CDS | 50.0% | |
| GCCAAGTTGCCAAGTGTAGT+AGG | - | chr1_2:18419651-18419670 | None:intergenic | 50.0% | |
| CTACACTTGGCAACTTGGCT+TGG | + | chr1_2:18419652-18419671 | Msa0060630:three_prime_UTR | 50.0% | |
| GGCTGGGAAAGCTCAACAAG+AGG | + | chr1_2:18412351-18412370 | Msa0060630:CDS | 55.0% | |
| CGTGTCGCAAAGCTCTTAGG+AGG | + | chr1_2:18413670-18413689 | Msa0060630:CDS | 55.0% | |
| GTCGCAAAGCTCTTAGGAGG+AGG | + | chr1_2:18413673-18413692 | Msa0060630:CDS | 55.0% | |
| GTGTTTAGAAGGGCAGGGGA+AGG | + | chr1_2:18415504-18415523 | Msa0060630:intron | 55.0% | |
| GTTTAGAAGGGCAGGGGAAG+GGG | + | chr1_2:18415506-18415525 | Msa0060630:intron | 55.0% | |
| GGAGAGAGTGACAGAGTGGA+AGG | + | chr1_2:18415533-18415552 | Msa0060630:intron | 55.0% | |
| ! | AAGGGAGCAGTGCTTGGTGA+TGG | + | chr1_2:18415552-18415571 | Msa0060630:intron | 55.0% |
| !! | TGCTTGGTGATGGAGGAGGA+GGG | + | chr1_2:18415562-18415581 | Msa0060630:intron | 55.0% |
| TGGAGGAGGAGGGGAATCAA+AGG | + | chr1_2:18415572-18415591 | Msa0060630:intron | 55.0% | |
| GCCCAAGTGATTGTAAGCGG+AGG | + | chr1_2:18416011-18416030 | Msa0060630:CDS | 55.0% | |
| ACGACCCCGTATGTTTGCAG+AGG | - | chr1_2:18416806-18416825 | None:intergenic | 55.0% | |
| AGGGATAGCCGTATTGTGCC+TGG | + | chr1_2:18416922-18416941 | Msa0060630:CDS | 55.0% | |
| CTGCAGCTCCAGGCACAATA+CGG | - | chr1_2:18416933-18416952 | None:intergenic | 55.0% | |
| GGGAAGCCCTCACCTTTATC+AGG | + | chr1_2:18417296-18417315 | Msa0060630:intron | 55.0% | |
| CTCGTGGCCTGATAAAGGTG+AGG | - | chr1_2:18417306-18417325 | None:intergenic | 55.0% | |
| CTCACCTTTATCAGGCCACG+AGG | + | chr1_2:18417304-18417323 | Msa0060630:intron | 55.0% | |
| TGACCCTCGTGGCCTGATAA+AGG | - | chr1_2:18417311-18417330 | None:intergenic | 55.0% | |
| ! | GTGGGTGGTCTGATGGATCT+AGG | - | chr1_2:18417498-18417517 | None:intergenic | 55.0% |
| TGCTGCATGCACTGTGCTAC+GGG | + | chr1_2:18418265-18418284 | Msa0060630:CDS | 55.0% | |
| AAGGCCCCCTCACCAATCAA+TGG | - | chr1_2:18418980-18418999 | None:intergenic | 55.0% | |
| ! | GTGAGGGGGCCTTAGACTTT+TGG | + | chr1_2:18418987-18419006 | Msa0060630:intron | 55.0% |
| ATTATGGCGAAACCGGCTGG+GGG | + | chr1_2:18419530-18419549 | Msa0060630:CDS | 55.0% | |
| TAGTCTTCGTCCATGCCAGC+AGG | - | chr1_2:18419575-18419594 | None:intergenic | 55.0% | |
| CGCACTTCTCTCGGTCCCAA+TGG | + | chr1_2:18411514-18411533 | Msa0060630:CDS | 60.0% | |
| TGGGGCAGTGAGTAAGCCTC+TGG | + | chr1_2:18415096-18415115 | Msa0060630:intron | 60.0% | |
| GAGTGGAAGGGAGCAGTGCT+TGG | + | chr1_2:18415546-18415565 | Msa0060630:intron | 60.0% | |
| !! | GGAGCAGTGCTTGGTGATGG+AGG | + | chr1_2:18415555-18415574 | Msa0060630:intron | 60.0% |
| !! | GCAGTGCTTGGTGATGGAGG+AGG | + | chr1_2:18415558-18415577 | Msa0060630:intron | 60.0% |
| !! | GTGCTTGGTGATGGAGGAGG+AGG | + | chr1_2:18415561-18415580 | Msa0060630:intron | 60.0% |
| !! | GCTTGGTGATGGAGGAGGAG+GGG | + | chr1_2:18415563-18415582 | Msa0060630:intron | 60.0% |
| CGGAGGAGCAGTAGGAGAGA+TGG | + | chr1_2:18416028-18416047 | Msa0060630:CDS | 60.0% | |
| TGCATGCACTGTGCTACGGG+TGG | + | chr1_2:18418268-18418287 | Msa0060630:CDS | 60.0% | |
| ! | TGAGGAAGCTGAGTTGGCGG+AGG | + | chr1_2:18418856-18418875 | Msa0060630:intron | 60.0% |
| ! | GAGGAAGCTGAGTTGGCGGA+GGG | + | chr1_2:18418857-18418876 | Msa0060630:intron | 60.0% |
| ! | AGGAAGCTGAGTTGGCGGAG+GGG | + | chr1_2:18418858-18418877 | Msa0060630:intron | 60.0% |
| GCAGGTTGCTCTCTCTTGCC+AGG | - | chr1_2:18419557-18419576 | None:intergenic | 60.0% | |
| GGCAAGAGAGAGCAACCTGC+TGG | + | chr1_2:18419557-18419576 | Msa0060630:CDS | 60.0% | |
| GAGAGAGCAACCTGCTGGCA+TGG | + | chr1_2:18419562-18419581 | Msa0060630:CDS | 60.0% | |
| AAGGGCAGGGGAAGGGGAGA+AGG | + | chr1_2:18415512-18415531 | Msa0060630:intron | 65.0% | |
| CACTGTGCTACGGGTGGACC+AGG | + | chr1_2:18418274-18418293 | Msa0060630:CDS | 65.0% | |
| AGTTGGCGGAGGGGAGAGAG+AGG | + | chr1_2:18418867-18418886 | Msa0060630:intron | 65.0% | |
| GTTGGCGGAGGGGAGAGAGA+GGG | + | chr1_2:18418868-18418887 | Msa0060630:intron | 65.0% | |
| CTCTTGCCAGGTCCCCCAGC+CGG | - | chr1_2:18419545-18419564 | None:intergenic | 70.0% | |
| GCGAAACCGGCTGGGGGACC+TGG | + | chr1_2:18419536-18419555 | Msa0060630:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 18411258 | 18419993 | 18411258 | ID=Msa0060630;Name=Msa0060630 |
| chr1_2 | mRNA | 18411258 | 18419993 | 18411258 | ID=Msa0060630-mRNA-1;Parent=Msa0060630;Name=Msa0060630-mRNA-1;_AED=0.10;_eAED=0.10;_QI=136|0.83|0.84|1|1|1|13|398|502 |
| chr1_2 | exon | 18411258 | 18411535 | 18411258 | ID=Msa0060630-mRNA-1:exon:7153;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18412320 | 18412501 | 18412320 | ID=Msa0060630-mRNA-1:exon:7154;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18413376 | 18413522 | 18413376 | ID=Msa0060630-mRNA-1:exon:7155;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18413616 | 18413777 | 18413616 | ID=Msa0060630-mRNA-1:exon:7156;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18414785 | 18414862 | 18414785 | ID=Msa0060630-mRNA-1:exon:7157;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18415942 | 18416075 | 18415942 | ID=Msa0060630-mRNA-1:exon:7158;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18416232 | 18416304 | 18416232 | ID=Msa0060630-mRNA-1:exon:7159;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18416386 | 18416463 | 18416386 | ID=Msa0060630-mRNA-1:exon:7160;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18416592 | 18416714 | 18416592 | ID=Msa0060630-mRNA-1:exon:7161;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18416913 | 18416965 | 18416913 | ID=Msa0060630-mRNA-1:exon:7162;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18417772 | 18417981 | 18417772 | ID=Msa0060630-mRNA-1:exon:7163;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18418238 | 18418295 | 18418238 | ID=Msa0060630-mRNA-1:exon:7164;Parent=Msa0060630-mRNA-1 |
| chr1_2 | exon | 18419527 | 18419993 | 18419527 | ID=Msa0060630-mRNA-1:exon:7165;Parent=Msa0060630-mRNA-1 |
| chr1_2 | five_prime_UTR | 18411258 | 18411393 | 18411258 | ID=Msa0060630-mRNA-1:five_prime_utr;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18411394 | 18411535 | 18411394 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18412320 | 18412501 | 18412320 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18413376 | 18413522 | 18413376 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18413616 | 18413777 | 18413616 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18414785 | 18414862 | 18414785 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18415942 | 18416075 | 18415942 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18416232 | 18416304 | 18416232 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18416386 | 18416463 | 18416386 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18416592 | 18416714 | 18416592 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18416913 | 18416965 | 18416913 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18417772 | 18417981 | 18417772 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18418238 | 18418295 | 18418238 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | CDS | 18419527 | 18419595 | 18419527 | ID=Msa0060630-mRNA-1:cds;Parent=Msa0060630-mRNA-1 |
| chr1_2 | three_prime_UTR | 18419596 | 18419993 | 18419596 | ID=Msa0060630-mRNA-1:three_prime_utr;Parent=Msa0060630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
