AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0082400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0082400 MtrunA17_Chr1g0195611 92.982 513 36 0 17 529 1 513 0.0 1015
Msa0082400 MtrunA17_Chr5g0428831 93.191 514 34 1 17 529 1 514 0.0 1007
Msa0082400 MtrunA17_Chr1g0195641 91.768 413 33 1 17 429 1 412 0.0 783
Msa0082400 MtrunA17_Chr4g0006971 59.465 486 191 4 43 524 27 510 0.0 607
Msa0082400 MtrunA17_Chr7g0242691 57.200 500 208 4 35 529 21 519 0.0 598
Msa0082400 MtrunA17_Chr7g0242681 58.691 489 197 4 44 529 39 525 0.0 597
Msa0082400 MtrunA17_Chr4g0043091 44.618 511 244 8 15 507 16 505 4.31e-156 454
Msa0082400 MtrunA17_Chr4g0033311 46.012 489 236 11 37 504 33 514 5.49e-142 419
Msa0082400 MtrunA17_Chr6g0482131 44.024 502 237 10 34 504 23 511 6.26e-139 411
Msa0082400 MtrunA17_Chr2g0329201 43.400 500 260 9 25 504 10 506 1.67e-138 410
Msa0082400 MtrunA17_Chr2g0317821 41.992 512 275 9 10 506 2 506 5.24e-138 409
Msa0082400 MtrunA17_Chr2g0317841 41.359 515 274 8 10 506 2 506 1.47e-136 405
Msa0082400 MtrunA17_Chr2g0329191 43.802 484 253 8 37 504 28 508 2.23e-136 404
Msa0082400 MtrunA17_Chr6g0482081 42.248 516 264 9 15 504 5 512 8.38e-136 403
Msa0082400 MtrunA17_Chr3g0087261 43.096 478 248 7 43 503 37 507 1.23e-135 402
Msa0082400 MtrunA17_Chr4g0033271 43.984 507 255 10 25 506 10 512 3.00e-135 402
Msa0082400 MtrunA17_Chr4g0033191 43.532 487 245 9 42 506 42 520 3.12e-135 402
Msa0082400 MtrunA17_Chr4g0033341 44.856 486 242 9 38 504 64 542 3.17e-135 403
Msa0082400 MtrunA17_Chr4g0033331 44.421 484 247 8 38 503 34 513 6.33e-135 401
Msa0082400 MtrunA17_Chr4g0033321 44.699 481 238 8 44 503 34 507 8.34e-135 401
Msa0082400 MtrunA17_Chr3g0088441 43.149 489 250 10 37 504 32 513 7.58e-134 399
Msa0082400 MtrunA17_Chr4g0010501 43.849 504 241 10 23 504 10 493 1.56e-133 397
Msa0082400 MtrunA17_Chr4g0033401 44.491 481 239 8 44 503 35 508 3.41e-133 397
Msa0082400 MtrunA17_Chr6g0482951 41.961 510 266 9 18 503 7 510 4.40e-133 396
Msa0082400 MtrunA17_Chr6g0482941 42.248 516 265 10 15 503 1 510 1.26e-132 395
Msa0082400 MtrunA17_Chr4g0033201 41.929 508 262 8 26 504 8 511 3.37e-132 394
Msa0082400 MtrunA17_Chr4g0042171 40.039 512 284 9 24 518 8 513 1.21e-130 390
Msa0082400 MtrunA17_Chr3g0090131 42.589 479 246 8 41 504 19 483 3.48e-130 388
Msa0082400 MtrunA17_Chr6g0482071 41.811 519 263 10 25 509 4 517 1.57e-129 387
Msa0082400 MtrunA17_Chr3g0087271 42.227 476 255 7 43 503 38 508 3.65e-128 384
Msa0082400 MtrunA17_Chr3g0090111 42.227 476 245 10 44 504 20 480 4.35e-127 380
Msa0082400 MtrunA17_Chr4g0074561 39.873 474 264 7 48 503 40 510 3.11e-123 371
Msa0082400 MtrunA17_Chr2g0329321 40.994 483 243 8 37 504 32 487 1.34e-122 369
Msa0082400 MtrunA17_Chr4g0074551 38.491 517 293 9 12 511 22 530 6.63e-122 369
Msa0082400 MtrunA17_Chr2g0288071 38.735 506 285 8 25 510 47 547 3.66e-121 367
Msa0082400 MtrunA17_Chr2g0288021 38.780 508 287 8 14 503 6 507 4.20e-120 363
Msa0082400 MtrunA17_Chr4g0033231 40.956 481 232 10 45 504 43 492 6.49e-120 362
Msa0082400 MtrunA17_Chr4g0033261 40.373 483 234 8 44 504 42 492 1.06e-119 361
Msa0082400 MtrunA17_Chr5g0430451 38.911 496 252 8 33 504 29 497 1.83e-109 335
Msa0082400 MtrunA17_Chr5g0418871 49.848 329 159 5 64 387 4 331 1.44e-108 327
Msa0082400 MtrunA17_Chr4g0006131 37.090 488 256 7 44 507 43 503 6.73e-108 331
Msa0082400 MtrunA17_Chr4g0006111 38.095 504 249 15 34 504 51 524 2.33e-106 328
Msa0082400 MtrunA17_Chr7g0234131 38.936 470 264 12 44 503 76 532 9.69e-94 296
Msa0082400 MtrunA17_Chr7g0234111 38.248 468 269 10 44 503 76 531 4.25e-93 294
Msa0082400 MtrunA17_Chr7g0234091 37.632 473 265 10 44 503 76 531 1.30e-92 293
Msa0082400 MtrunA17_Chr2g0301231 36.627 415 209 9 114 504 7 391 8.55e-81 257
Msa0082400 MtrunA17_Chr7g0230651 34.959 369 222 9 83 444 14 371 2.57e-73 238
Msa0082400 MtrunA17_Chr3g0087201 37.425 334 189 7 182 503 17 342 8.17e-68 222
Msa0082400 MtrunA17_Chr3g0087191 56.364 165 64 3 25 181 1 165 1.21e-55 184
Msa0082400 MtrunA17_Chr7g0227561 34.307 274 141 6 45 313 48 287 3.96e-49 171
Msa0082400 MtrunA17_Chr7g0236731 39.431 246 130 5 130 363 31 269 6.19e-48 167
Msa0082400 MtrunA17_Chr1g0195651 98.684 76 1 0 454 529 1 76 5.14e-46 155
Msa0082400 MtrunA17_Chr8g0352881 44.660 103 57 0 266 368 58 160 3.28e-25 102
Msa0082400 MtrunA17_Chr8g0352881 72.222 54 13 1 51 102 6 59 2.42e-18 82.4
Msa0082400 MtrunA17_Chr4g0068871 25.061 407 241 11 104 503 183 532 8.50e-20 93.2
Msa0082400 MtrunA17_Chr5g0418861 47.436 78 39 2 427 503 14 90 1.18e-17 78.2
Msa0082400 MtrunA17_Chr2g0288031 46.774 62 31 1 190 251 4 63 5.02e-13 63.9
Msa0082400 MtrunA17_Chr7g0227591 51.852 54 25 1 450 503 13 65 3.73e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0082400 AT1G02850.2 64.179 469 167 1 38 506 21 488 0.0 651
Msa0082400 AT1G02850.5 61.179 492 167 2 38 506 21 511 0.0 638
Msa0082400 AT1G02850.4 61.055 493 167 3 38 506 21 512 0.0 634
Msa0082400 AT1G02850.1 60.981 469 155 2 38 506 21 461 0.0 604
Msa0082400 AT4G27830.1 53.614 498 212 7 17 506 1 487 0.0 554
Msa0082400 AT1G45191.4 54.183 502 211 8 16 510 1 490 0.0 550
Msa0082400 AT1G60090.2 53.768 491 213 6 26 510 7 489 0.0 543
Msa0082400 AT4G22100.1 54.545 495 210 7 22 510 4 489 0.0 542
Msa0082400 AT1G45191.2 53.693 501 221 7 16 510 1 496 0.0 542
Msa0082400 AT1G45191.6 53.162 506 221 7 16 510 1 501 0.0 541
Msa0082400 AT1G60090.1 52.767 506 202 6 26 510 7 496 0.0 540
Msa0082400 AT1G45191.1 52.132 516 223 7 16 510 1 513 0.0 538
Msa0082400 AT1G02850.3 60.988 405 134 2 38 419 21 424 0.0 531
Msa0082400 AT4G27820.1 53.291 471 211 4 40 506 20 485 0.0 522
Msa0082400 AT3G62750.1 51.639 488 213 6 27 506 4 476 1.66e-175 504
Msa0082400 AT3G62750.2 51.639 488 213 6 27 506 30 502 3.97e-175 504
Msa0082400 AT3G62740.1 49.793 484 230 7 27 506 7 481 5.27e-170 490
Msa0082400 AT4G27830.2 53.827 405 175 4 108 506 1 399 8.95e-159 459
Msa0082400 AT4G27820.2 51.861 403 187 3 108 506 1 400 1.04e-149 436
Msa0082400 AT4G27820.3 51.861 403 187 3 108 506 1 400 1.04e-149 436
Msa0082400 AT3G62750.4 50.808 433 190 6 27 451 30 447 1.46e-148 434
Msa0082400 AT1G45191.5 59.012 344 136 3 16 358 1 340 1.19e-147 430
Msa0082400 AT1G45191.3 59.012 344 136 3 16 358 1 340 1.23e-147 430
Msa0082400 AT1G26560.1 44.075 481 251 8 42 506 31 509 7.01e-145 427
Msa0082400 AT3G62740.2 49.061 426 204 7 27 448 7 423 5.68e-144 421
Msa0082400 AT1G60270.1 54.762 378 158 6 29 401 10 379 1.48e-143 418
Msa0082400 AT3G18080.1 43.451 481 252 7 38 504 34 508 2.39e-139 412
Msa0082400 AT3G62750.6 49.257 404 187 4 108 506 1 391 1.92e-137 404
Msa0082400 AT3G62750.5 49.257 404 187 4 108 506 1 391 1.92e-137 404
Msa0082400 AT2G44480.1 43.958 480 250 7 45 508 37 513 2.23e-137 407
Msa0082400 AT2G44480.3 43.958 480 250 7 45 508 68 544 6.46e-137 407
Msa0082400 AT5G54570.1 42.181 486 256 8 38 503 25 505 1.09e-135 404
Msa0082400 AT3G62750.7 56.119 335 132 3 27 358 4 326 2.21e-133 392
Msa0082400 AT3G62750.8 56.119 335 132 3 27 358 4 326 2.21e-133 392
Msa0082400 AT3G62750.3 55.952 336 133 3 27 359 30 353 1.79e-132 392
Msa0082400 AT5G44640.1 43.260 497 260 9 25 503 9 501 8.22e-131 390
Msa0082400 AT3G18070.3 41.942 484 247 8 38 504 25 491 3.02e-129 386
Msa0082400 AT1G61820.1 41.304 506 261 10 26 504 9 505 3.79e-129 387
Msa0082400 AT5G42260.1 43.205 493 258 9 25 499 9 497 1.53e-128 385
Msa0082400 AT3G18070.1 41.942 484 253 8 38 504 25 497 2.39e-128 384
Msa0082400 AT2G25630.1 42.485 499 255 10 25 509 9 489 1.70e-127 381
Msa0082400 AT2G44450.1 43.361 482 260 7 33 503 21 500 4.14e-127 381
Msa0082400 AT3G60130.1 43.064 483 243 9 45 506 32 503 3.48e-125 376
Msa0082400 AT5G36890.2 41.667 492 254 10 30 505 7 481 5.84e-124 372
Msa0082400 AT5G36890.1 41.667 492 254 10 30 505 7 481 8.05e-124 372
Msa0082400 AT5G24550.1 40.486 494 257 10 38 504 27 510 1.57e-120 365
Msa0082400 AT5G54570.3 42.227 431 226 6 38 449 25 451 1.59e-120 362
Msa0082400 AT1G61810.1 40.632 475 260 8 48 504 38 508 2.32e-120 364
Msa0082400 AT3G60140.1 38.327 514 290 13 25 519 8 513 2.02e-118 361
Msa0082400 AT2G44470.3 40.377 478 263 9 45 503 31 505 1.79e-115 354
Msa0082400 AT1G61810.3 40.839 453 248 7 48 482 38 488 3.27e-115 352
Msa0082400 AT5G54570.2 42.373 413 216 7 108 503 1 408 5.37e-115 347
Msa0082400 AT4G21760.2 39.195 472 272 7 48 508 59 526 6.00e-114 348
Msa0082400 AT2G44490.1 39.501 481 267 11 45 504 16 493 2.42e-113 347
Msa0082400 AT3G60120.1 39.506 486 265 12 41 504 12 490 4.91e-113 346
Msa0082400 AT4G21760.1 38.495 465 275 6 48 508 59 516 8.44e-113 345
Msa0082400 AT2G44480.2 42.271 414 223 6 108 508 1 411 2.41e-112 340
Msa0082400 AT5G24540.1 40.486 494 257 10 38 504 27 510 7.59e-112 343
Msa0082400 AT1G51470.1 38.797 482 265 10 39 503 41 509 1.08e-110 339
Msa0082400 AT1G47600.1 38.912 478 270 9 39 503 41 509 4.06e-110 337
Msa0082400 AT1G47600.2 39.004 482 263 11 39 503 41 508 1.50e-109 336
Msa0082400 AT1G60270.2 53.846 299 126 5 108 401 1 292 2.24e-109 328
Msa0082400 AT5G25980.2 38.431 497 274 10 32 506 39 525 6.28e-109 335
Msa0082400 AT5G26000.1 36.471 510 301 8 15 506 10 514 1.02e-107 332
Msa0082400 AT2G44460.1 38.900 509 284 12 17 503 1 504 1.81e-106 330
Msa0082400 AT3G03640.1 37.058 537 295 13 22 522 2 531 4.54e-106 328
Msa0082400 AT1G52400.3 38.058 515 283 12 20 504 8 516 1.24e-105 327
Msa0082400 AT1G52400.1 38.058 515 283 12 20 504 8 516 1.24e-105 327
Msa0082400 AT2G32860.2 37.967 482 270 10 45 503 96 571 1.90e-105 328
Msa0082400 AT2G44480.4 50.671 298 140 3 45 337 68 363 2.17e-104 319
Msa0082400 AT2G32860.1 37.423 489 262 11 45 503 96 570 3.88e-104 325
Msa0082400 AT1G75940.1 38.755 498 260 13 39 503 32 517 6.50e-104 322
Msa0082400 AT3G60140.2 39.609 409 233 8 25 421 8 414 8.45e-103 317
Msa0082400 AT1G66280.1 36.347 531 302 12 15 516 1 524 2.95e-102 318
Msa0082400 AT3G09260.1 38.477 499 279 14 40 516 32 524 1.07e-101 316
Msa0082400 AT1G66270.1 38.277 499 281 11 39 516 32 524 1.57e-101 316
Msa0082400 AT3G60130.3 41.404 413 222 8 102 506 40 440 4.83e-101 312
Msa0082400 AT3G21370.1 36.585 492 276 11 40 504 30 512 8.90e-101 314
Msa0082400 AT5G28510.1 38.048 502 282 16 40 516 36 533 4.02e-100 312
Msa0082400 AT1G61810.5 40.196 408 225 7 112 504 5 408 4.54e-100 308
Msa0082400 AT3G18070.4 45.238 336 176 4 38 371 25 354 3.87e-99 305
Msa0082400 AT3G60130.2 40.426 423 223 8 102 506 40 451 5.32e-99 307
Msa0082400 AT2G44470.1 40.191 418 230 7 45 444 31 446 3.01e-98 305
Msa0082400 AT1G66270.2 37.876 499 281 12 39 516 32 522 3.24e-98 307
Msa0082400 AT2G44470.2 47.284 313 159 4 45 352 31 342 3.11e-97 300
Msa0082400 AT1G61810.4 40.933 386 214 6 48 421 38 421 4.01e-96 298
Msa0082400 AT5G24540.2 40.941 425 216 8 38 436 27 442 1.34e-95 298
Msa0082400 AT5G26000.2 36.937 444 258 7 15 441 10 448 5.92e-95 296
Msa0082400 AT5G25980.3 37.813 439 242 9 32 449 39 467 1.20e-93 293
Msa0082400 AT5G25980.1 37.813 439 242 9 32 449 39 467 1.20e-93 293
Msa0082400 AT5G48375.1 36.054 441 209 8 39 468 34 412 5.50e-87 275
Msa0082400 AT1G61820.3 39.247 372 198 7 152 504 4 366 7.96e-86 270
Msa0082400 AT1G52400.2 36.463 458 257 10 20 448 8 460 4.95e-85 271
Msa0082400 AT5G16580.1 46.284 296 139 7 176 459 12 299 3.23e-78 248
Msa0082400 AT1G61810.2 44.867 263 139 3 48 306 38 298 8.76e-78 247
Msa0082400 AT2G44450.2 38.177 351 209 5 159 503 1 349 2.76e-74 239
Msa0082400 AT3G18070.2 38.690 336 182 6 184 504 94 420 1.55e-73 240
Msa0082400 AT3G18070.2 46.269 67 34 1 38 102 25 91 2.08e-11 66.6
Msa0082400 AT1G51490.1 43.042 309 153 10 51 351 28 321 1.44e-67 224
Msa0082400 AT3G18070.7 37.975 316 172 6 204 504 2 308 1.68e-67 220
Msa0082400 AT2G44480.5 35.806 310 185 5 210 508 1 307 2.06e-60 202
Msa0082400 AT2G44460.2 35.813 363 212 9 157 503 1 358 9.79e-59 201
Msa0082400 AT3G18070.5 37.247 247 137 4 184 419 94 333 6.00e-48 170
Msa0082400 AT3G18070.5 46.269 67 34 1 38 102 25 91 1.26e-11 66.6
Msa0082400 AT3G18070.6 36.123 227 127 4 204 419 2 221 6.07e-42 150
Msa0082400 AT3G06510.2 24.590 427 266 17 103 509 159 549 6.65e-17 84.3
Msa0082400 AT3G06510.1 24.337 415 248 15 103 509 159 515 1.39e-16 83.2

Find 151 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACACATTCAAGACCCTTTA+TGG 0.110511 1_2:+61280533 Msa0082400:CDS
GCAAGTCATCTTTGGTTTCT+AGG 0.204267 1_2:+61281787 Msa0082400:three_prime_UTR
AAGGGTTCCTATGACTTTAT+TGG 0.240240 1_2:+61280021 Msa0082400:CDS
CCTATATTCATTCATGAAAA+TGG 0.260858 1_2:+61280563 Msa0082400:CDS
TGCGCCCGCATTAGCCTTCA+TGG 0.268430 1_2:-61279959 None:intergenic
CCATTCACACCATGGGCTTT+AGG 0.274157 1_2:+61280500 Msa0082400:CDS
TGGTATCTACTTCTTCGATT+TGG 0.291417 1_2:+61281633 Msa0082400:three_prime_UTR
TGCTTCTAAACTTGGCTGTT+GGG 0.299049 1_2:+61277934 Msa0082400:CDS
GGTATCTACTTCTTCGATTT+GGG 0.300895 1_2:+61281634 Msa0082400:three_prime_UTR
TCTTTCTCTGTATTTGTTTG+AGG 0.304065 1_2:-61279787 None:intergenic
GATGGATATAAATCGATCTA+TGG 0.305296 1_2:+61281244 Msa0082400:CDS
CATTGATGCATTTGAGTTGT+TGG 0.312270 1_2:+61281222 Msa0082400:CDS
GGTATCTCAATATATACATT+TGG 0.325471 1_2:+61279757 Msa0082400:CDS
TTCCAGATGCAAGTCATCTT+TGG 0.343118 1_2:+61281779 Msa0082400:three_prime_UTR
ATGGAAGAACTCCCAGCATT+TGG 0.343859 1_2:+61278140 Msa0082400:CDS
ACTACCTACAGCGAAGATAT+TGG 0.346387 1_2:-61279467 None:intergenic
GTCAGGCACCTCTGCATATC+AGG 0.349767 1_2:+61278013 Msa0082400:CDS
CATTAAAGTGTTATTACATA+TGG 0.351795 1_2:+61281451 Msa0082400:three_prime_UTR
GTGCTCTCTATAATGCAAAA+TGG 0.355210 1_2:-61279529 None:intergenic
TCTTATGTTGTTTCAAAGGT+TGG 0.359688 1_2:+61281912 Msa0082400:three_prime_UTR
TTGCTTCTAAACTTGGCTGT+TGG 0.364143 1_2:+61277933 Msa0082400:CDS
CTTATGTTGTTTCAAAGGTT+GGG 0.365772 1_2:+61281913 Msa0082400:three_prime_UTR
TCGTGAATCCGAACAAGTTA+AGG 0.366298 1_2:+61280002 Msa0082400:CDS
CTCAACATTTGAACCGTACT+TGG 0.368575 1_2:+61279561 Msa0082400:CDS
TTGTAGTACTGCAATCCCTT+CGG 0.373899 1_2:-61278807 None:intergenic
TGTAGTACTGCAATCCCTTC+GGG 0.378058 1_2:-61278806 None:intergenic
TGGACATTTACTTCTGTAGT+AGG 0.379162 1_2:+61281411 Msa0082400:exon
TGGTGCTATTGAGCTCAATA+AGG 0.381821 1_2:+61281369 Msa0082400:CDS
AAGACAGAACTGAGAGATTT+CGG 0.382106 1_2:+61280093 Msa0082400:CDS
GTGCCGTGCTTGATTCCTTA+AGG 0.388056 1_2:+61280966 Msa0082400:CDS
ATCAATGAACTCATTAGAAA+TGG 0.390504 1_2:+61278837 Msa0082400:CDS
TGGAAAATCTATAGGCTTCA+AGG 0.392213 1_2:-61278617 None:intergenic
GGGTTTGCCCGTGGAGGAAA+TGG 0.393149 1_2:+61278455 Msa0082400:intron
ACCCAAAGCTATCCGCAAAA+TGG 0.396995 1_2:+61281308 Msa0082400:CDS
CTACCTACAGCGAAGATATT+GGG 0.398761 1_2:-61279466 None:intergenic
CGCATTAGCCTTCATGGAAT+CGG 0.401593 1_2:-61279953 None:intergenic
CCAAGAAATGGAAAATCTAT+AGG 0.402931 1_2:-61278625 None:intergenic
TCTTGTTTACCTTGTATTTG+TGG 0.405045 1_2:-61278499 None:intergenic
TCGCATAGTTCACGCATAGA+TGG 0.406665 1_2:-61281843 None:intergenic
GTATCTCAATATATACATTT+GGG 0.412188 1_2:+61279758 Msa0082400:CDS
GTGCAGCTCATGCTTGAAAC+AGG 0.412834 1_2:+61278594 Msa0082400:CDS
ATAGGAACCCTTAACTTGTT+CGG 0.417408 1_2:-61280010 None:intergenic
ATATAGGTGGATTTCCATAA+AGG 0.421861 1_2:-61280547 None:intergenic
TGGAAGAACTCCCAGCATTT+GGG 0.421902 1_2:+61278141 Msa0082400:CDS
AATTATGCCAATAAAGTCAT+AGG 0.425994 1_2:-61280028 None:intergenic
TCAAGTGAAGTACTCAACTA+TGG 0.426534 1_2:-61281997 None:intergenic
TATCAATCTTGACCAAGAAA+TGG 0.432438 1_2:-61278637 None:intergenic
CTGCAATCCCTTCGGGTTGA+CGG 0.436534 1_2:-61278799 None:intergenic
GAAAGTGATACTATAGTTCA+TGG 0.445064 1_2:+61281935 Msa0082400:three_prime_UTR
GTATTTGTGGTACGTGTCGC+AGG 0.445916 1_2:-61278486 None:intergenic
GTAGTCATGACTAACTCTAA+TGG 0.448022 1_2:+61281699 Msa0082400:three_prime_UTR
TGCAATCCCTTCGGGTTGAC+GGG 0.451654 1_2:-61278798 None:intergenic
AACCAAAGATGACTTGCATC+TGG 0.453002 1_2:-61281781 None:intergenic
TATAGGTGGATTTCCATAAA+GGG 0.454419 1_2:-61280546 None:intergenic
CGTGAATCCGAACAAGTTAA+GGG 0.454889 1_2:+61280003 Msa0082400:CDS
TGCAAAGGTATCCCAAATGC+TGG 0.456359 1_2:-61278152 None:intergenic
GACGCGGCTGCAAAGGCACT+TGG 0.461462 1_2:+61280120 Msa0082400:CDS
AGTAAAAGACAACACCGAAT+TGG 0.467533 1_2:-61277797 None:intergenic
CATCACTTCATGATGAATCA+AGG 0.468195 1_2:+61280918 Msa0082400:CDS
AAATTCTTATGTTGTTTCAA+AGG 0.476031 1_2:+61281908 Msa0082400:three_prime_UTR
TGGGATACCTTTGCACATGC+TGG 0.477610 1_2:+61278160 Msa0082400:CDS
CAGAAATGGATCAAATATGA+AGG 0.478384 1_2:+61281180 Msa0082400:intron
CCTAAAGCCCATGGTGTGAA+TGG 0.479060 1_2:-61280500 None:intergenic
CGGTGCAGACGCGGCTGCAA+AGG 0.480897 1_2:+61280113 Msa0082400:CDS
AAACAAATACAGAGAAAGAC+AGG 0.482898 1_2:+61279791 Msa0082400:CDS
GAGGAACAAAATGGATATGT+TGG 0.486410 1_2:+61279736 Msa0082400:CDS
GCTTCTAAACTTGGCTGTTG+GGG 0.486481 1_2:+61277935 Msa0082400:CDS
ATGGAACACATCTATGTTTG+AGG 0.488280 1_2:+61277836 Msa0082400:exon
TTTGGGTATCTTCTCAACTC+TGG 0.491607 1_2:-61281292 None:intergenic
AGAATTTGTTAAGATGTCTC+AGG 0.491942 1_2:-61281892 None:intergenic
GCAGGTGTAGAGGAAATACT+TGG 0.494686 1_2:+61280368 Msa0082400:intron
TTGCATACACAGATGAATAG+TGG 0.495280 1_2:-61281578 None:intergenic
TATTTCTTCCCAGATGGTAG+AGG 0.495507 1_2:+61278774 Msa0082400:intron
ACATTGCAGGAGGAACAAAA+TGG 0.499330 1_2:+61279727 Msa0082400:intron
GCATTAGCCTTCATGGAATC+GGG 0.502125 1_2:-61279952 None:intergenic
ATAAGTCAGAACCACCAATT+CGG 0.504232 1_2:+61277783 Msa0082400:five_prime_UTR
GCAATAAAGAAAAGACAGGT+TGG 0.507374 1_2:-61281733 None:intergenic
GATTCATCACTTGTTTCAGT+TGG 0.507538 1_2:+61281391 Msa0082400:CDS
TTCAAATGTTGAGTTACCCT+TGG 0.507777 1_2:-61279551 None:intergenic
TGTGTAGTGTGACATGTGGT+TGG 0.507789 1_2:-61278986 None:intergenic
GGAAATACTTGGAGAGAATG+AGG 0.507889 1_2:+61280379 Msa0082400:CDS
GTTCTTAGATCAAATGATCC+AGG 0.508146 1_2:+61282057 Msa0082400:three_prime_UTR
TTTGTCGGTTAGCTGGTTCG+TGG 0.531949 1_2:+61281499 Msa0082400:three_prime_UTR
TGAGCTCAATAGCACCAACT+AGG 0.536868 1_2:-61281363 None:intergenic
TACATCTCCATTTCCTCCAC+GGG 0.537555 1_2:-61278462 None:intergenic
GAAGGAGCTGCTGATGAAGA+TGG 0.538137 1_2:+61278121 Msa0082400:CDS
TCTATGTTTGAGGAATATAC+AGG 0.540497 1_2:+61277846 Msa0082400:exon
AGGATGTGTTAAAATTTACA+AGG 0.540713 1_2:+61281807 Msa0082400:three_prime_UTR
GAGCTCAATAGCACCAACTA+GGG 0.543925 1_2:-61281362 None:intergenic
GATTGTATAGAAGAACGTAC+AGG 0.547614 1_2:+61279623 Msa0082400:CDS
GAGGAGAACATCGCCTAGGT+GGG 0.550679 1_2:-61279507 None:intergenic
ATGGGCTTTAGGACAAGTGC+TGG 0.550900 1_2:+61280511 Msa0082400:CDS
TGATCTCCCACAGGCACTTG+AGG 0.551911 1_2:+61279013 Msa0082400:CDS
ATGGATATAAATCGATCTAT+GGG 0.553604 1_2:+61281245 Msa0082400:CDS
GATGCATTTGAGTTGTTGGA+TGG 0.557277 1_2:+61281226 Msa0082400:CDS
TCGGGGATAGAGTCAAGTAT+TGG 0.557281 1_2:+61279428 Msa0082400:CDS
GGTACAAGATCCTCCCTAGT+TGG 0.557600 1_2:+61281349 Msa0082400:CDS
ATATGATGAACTACCAAGTA+CGG 0.560828 1_2:-61279574 None:intergenic
TTCGGATTCACGACTTGAGA+AGG 0.567810 1_2:-61279992 None:intergenic
ATGCGTTGCTTAGTGTCCGT+TGG 0.568364 1_2:-61280898 None:intergenic
GCTGTAGGTAGTTATGATCA+AGG 0.568860 1_2:+61279478 Msa0082400:CDS
CTAAAGCCCATGGTGTGAAT+GGG 0.574280 1_2:-61280499 None:intergenic
AAAAGACAACACCGAATTGG+TGG 0.575887 1_2:-61277794 None:intergenic
CTCAGTACCCATTCACACCA+TGG 0.576987 1_2:+61280492 Msa0082400:intron
GGGATAGTCTCCGTGCAACA+AGG 0.581800 1_2:-61279932 None:intergenic
TATTCATCCTCAAGTGCCTG+TGG 0.584747 1_2:-61279020 None:intergenic
GCACTTGAGGATGAATATGA+AGG 0.584798 1_2:+61279026 Msa0082400:CDS
GATTCCATGAAGGCTAATGC+GGG 0.585935 1_2:+61279955 Msa0082400:CDS
AAATACTTGCATGGATACAT+TGG 0.589515 1_2:+61280944 Msa0082400:CDS
CGATTCCATGAAGGCTAATG+CGG 0.589908 1_2:+61279954 Msa0082400:CDS
TGTTTGAATTGTTAGGCCAA+CGG 0.590244 1_2:+61280882 Msa0082400:intron
CTACATCTCCATTTCCTCCA+CGG 0.591371 1_2:-61278463 None:intergenic
TGCATTATAGAGAGCACCAA+GGG 0.592510 1_2:+61279535 Msa0082400:CDS
AGAAATGGATCAAATATGAA+GGG 0.593438 1_2:+61281181 Msa0082400:intron
ACAAGACTCAAACATGTATG+TGG 0.594850 1_2:-61277903 None:intergenic
CGACACGTACCACAAATACA+AGG 0.595864 1_2:+61278490 Msa0082400:CDS
ATTATGGAACCCTTGTTGCA+CGG 0.595957 1_2:+61279922 Msa0082400:CDS
ATCACTTCATGATGAATCAA+GGG 0.602506 1_2:+61280919 Msa0082400:CDS
GGAGGAGAACATCGCCTAGG+TGG 0.604005 1_2:-61279508 None:intergenic
AGCACTTGTCCTAAAGCCCA+TGG 0.604713 1_2:-61280509 None:intergenic
TCAGTACCCATTCACACCAT+GGG 0.607004 1_2:+61280493 Msa0082400:intron
TCAAGGGTGAAATACTTGCA+TGG 0.610483 1_2:+61280935 Msa0082400:CDS
ATGGGCTGTACTATGTCGAT+AGG 0.611327 1_2:+61281263 Msa0082400:CDS
GAGCCCAATATCTTCGCTGT+AGG 0.611798 1_2:+61279463 Msa0082400:CDS
AGACTATCCCGATTCCATGA+AGG 0.614373 1_2:+61279945 Msa0082400:CDS
CTCAATAGCACCAACTAGGG+AGG 0.624860 1_2:-61281359 None:intergenic
GCAAAGGTATCCCAAATGCT+GGG 0.627434 1_2:-61278151 None:intergenic
TAGAGGACCCGTCAACCCGA+AGG 0.628663 1_2:+61278791 Msa0082400:CDS
GATTCACGACTTGAGAAGGT+AGG 0.628977 1_2:-61279988 None:intergenic
ATTCATCCTCAAGTGCCTGT+GGG 0.630670 1_2:-61279019 None:intergenic
TTGAGGATGAATATGAAGGA+TGG 0.630697 1_2:+61279030 Msa0082400:CDS
TGAAGGATGGCTTAGTCGTG+AGG 0.633525 1_2:+61279043 Msa0082400:CDS
TCACTAACCAGCATGTGCAA+AGG 0.635746 1_2:-61278167 None:intergenic
AGAGGACCCGTCAACCCGAA+GGG 0.637162 1_2:+61278792 Msa0082400:CDS
ATTGTATAGAAGAACGTACA+GGG 0.641550 1_2:+61279624 Msa0082400:CDS
GAAGTTCTTTGAGAAATCTG+AGG 0.642090 1_2:+61281677 Msa0082400:three_prime_UTR
GAGAGATTTCGGTGCAGACG+CGG 0.645523 1_2:+61280104 Msa0082400:CDS
AAAGAGAACCTGATATGCAG+AGG 0.645981 1_2:-61278021 None:intergenic
CTCTCTATAATGCAAAATGG+AGG 0.649451 1_2:-61279526 None:intergenic
ATCAAGGAATCTCCCCACCT+AGG 0.654783 1_2:+61279494 Msa0082400:CDS
AATGGAGGAGAACATCGCCT+AGG 0.656199 1_2:-61279511 None:intergenic
ATATGAAGGGATATTTCATG+TGG 0.659330 1_2:+61281194 Msa0082400:CDS
GAGTGATCTCACATTAACAA+TGG 0.666472 1_2:+61281613 Msa0082400:three_prime_UTR
GGATAGTCTCCGTGCAACAA+GGG 0.671633 1_2:-61279931 None:intergenic
GATTATGATGAATAGGTGGA+AGG 0.677975 1_2:+61278103 Msa0082400:intron
TTACCTTAAGGAATCAAGCA+CGG 0.680664 1_2:-61280969 None:intergenic
AGGAGAACATCGCCTAGGTG+GGG 0.681198 1_2:-61279506 None:intergenic
ACACAATTATGATCTCCCAC+AGG 0.684337 1_2:+61279004 Msa0082400:CDS
AACAAATACAGAGAAAGACA+GGG 0.684960 1_2:+61279792 Msa0082400:CDS
TTGCATTATAGAGAGCACCA+AGG 0.710901 1_2:+61279534 Msa0082400:CDS
TAATTGTGTAGTGTGACATG+TGG 0.726672 1_2:-61278990 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTGATAATAAACTTTT+GGG - chr1_2:61278283-61278302 None:intergenic 10.0%
!!! AATAATTGATAATAAACTTT+TGG - chr1_2:61278284-61278303 None:intergenic 10.0%
!!! TTTTTCAAAAGATAATAAAA+TGG - chr1_2:61281007-61281026 None:intergenic 10.0%
!! ACAAAAAAAAAAATTGATGA+TGG + chr1_2:61277878-61277897 Msa0082400:CDS 15.0%
!!! AATCATTTTTCTGAATTATT+TGG + chr1_2:61278245-61278264 Msa0082400:intron 15.0%
!!! TGTTTTTGAAATCTTAATTA+AGG - chr1_2:61278903-61278922 None:intergenic 15.0%
!! AAAAACTTATAATAGAAAAG+TGG + chr1_2:61281756-61281775 Msa0082400:three_prime_UTR 15.0%
!! TAAAATACAATGAAATTGCA+TGG - chr1_2:61278070-61278089 None:intergenic 20.0%
!!! ACTAGCATTTTTATACAAAA+AGG + chr1_2:61278434-61278453 Msa0082400:intron 20.0%
!!! CTAGCATTTTTATACAAAAA+GGG + chr1_2:61278435-61278454 Msa0082400:intron 20.0%
!!! GAAATAAAAGCATTTTCAAA+GGG - chr1_2:61278760-61278779 None:intergenic 20.0%
!!! AGAAATAAAAGCATTTTCAA+AGG - chr1_2:61278761-61278780 None:intergenic 20.0%
!! TGTCAAAAAAATGCAATATA+AGG - chr1_2:61279334-61279353 None:intergenic 20.0%
!! ACACAGTATGAAAAAAAAAT+AGG - chr1_2:61279657-61279676 None:intergenic 20.0%
!! GTATCTCAATATATACATTT+GGG + chr1_2:61279758-61279777 Msa0082400:CDS 20.0%
!!! ATTATAACCATTTTTAGAGT+CGG - chr1_2:61279863-61279882 None:intergenic 20.0%
!!! TTTTTTTTATCCTTCAGAAA+TGG + chr1_2:61281166-61281185 Msa0082400:intron 20.0%
!!! CATTAAAGTGTTATTACATA+TGG + chr1_2:61281451-61281470 Msa0082400:three_prime_UTR 20.0%
!!! AAATTCTTATGTTGTTTCAA+AGG + chr1_2:61281908-61281927 Msa0082400:three_prime_UTR 20.0%
!! TTTCTTTTTGCTTCTAAACT+TGG + chr1_2:61277926-61277945 Msa0082400:CDS 25.0%
! TACTTGTGATTATGATGAAT+AGG + chr1_2:61278096-61278115 Msa0082400:intron 25.0%
!! CATTTTTCTGAATTATTTGG+AGG + chr1_2:61278248-61278267 Msa0082400:intron 25.0%
!! TCTATCTTTCTAATTTTGTC+TGG + chr1_2:61278531-61278550 Msa0082400:intron 25.0%
!! TATGATTCATCTTTTAATGC+AGG + chr1_2:61278566-61278585 Msa0082400:intron 25.0%
!! TTTAAGTTCAGTAGAATACT+TGG - chr1_2:61278663-61278682 None:intergenic 25.0%
! ATCAATGAACTCATTAGAAA+TGG + chr1_2:61278837-61278856 Msa0082400:CDS 25.0%
! AATTCTTAGTGCATGAAATA+AGG + chr1_2:61279118-61279137 Msa0082400:intron 25.0%
!!! AAAAAGTACTTTTTGTGCTT+AGG + chr1_2:61279299-61279318 Msa0082400:intron 25.0%
!!! TGTACTTTTCTGTGTTTTTT+TGG + chr1_2:61279674-61279693 Msa0082400:intron 25.0%
! GGTATCTCAATATATACATT+TGG + chr1_2:61279757-61279776 Msa0082400:CDS 25.0%
!! ACGAATTAGCGATTTTTATT+TGG + chr1_2:61279825-61279844 Msa0082400:CDS 25.0%
!!! CGAATTAGCGATTTTTATTT+GGG + chr1_2:61279826-61279845 Msa0082400:CDS 25.0%
! AATTATGCCAATAAAGTCAT+AGG - chr1_2:61280031-61280050 None:intergenic 25.0%
! TGTATCACATGTTGAATAAT+TGG + chr1_2:61280306-61280325 Msa0082400:intron 25.0%
!!! AATCATTTCTTTGTTTTCTG+TGG + chr1_2:61280341-61280360 Msa0082400:intron 25.0%
!! TTTTCATGAATGAATATAGG+TGG - chr1_2:61280563-61280582 None:intergenic 25.0%
!! CCATTTTCATGAATGAATAT+AGG - chr1_2:61280566-61280585 None:intergenic 25.0%
! CCTATATTCATTCATGAAAA+TGG + chr1_2:61280563-61280582 Msa0082400:CDS 25.0%
! TCAATGTAATATTGAACAAG+AGG - chr1_2:61280597-61280616 None:intergenic 25.0%
!! GATTGCAATTAATCTCTTTT+AGG + chr1_2:61280615-61280634 Msa0082400:intron 25.0%
! AACCTAGTCAAAATGTTATT+TGG - chr1_2:61280711-61280730 None:intergenic 25.0%
! ATTATCTATCCTCAATTGTA+TGG + chr1_2:61280754-61280773 Msa0082400:intron 25.0%
! TTTACAATTCCATACAATTG+AGG - chr1_2:61280766-61280785 None:intergenic 25.0%
! TTCCAATTGTTTGAATTGTT+AGG + chr1_2:61280875-61280894 Msa0082400:intron 25.0%
!!! TATACAAGTTTTGTGTGTTT+AGG - chr1_2:61281084-61281103 None:intergenic 25.0%
! GGATAAAAAAAAACATGAGA+AGG - chr1_2:61281158-61281177 None:intergenic 25.0%
! AGAAATGGATCAAATATGAA+GGG + chr1_2:61281181-61281200 Msa0082400:intron 25.0%
! ATGGATATAAATCGATCTAT+GGG + chr1_2:61281245-61281264 Msa0082400:CDS 25.0%
!! TAACTCTAATGGTTTTTCTT+TGG + chr1_2:61281710-61281729 Msa0082400:three_prime_UTR 25.0%
!! TTTTGCAATAAAGAAAAGAC+AGG - chr1_2:61281740-61281759 None:intergenic 25.0%
! AGGATGTGTTAAAATTTACA+AGG + chr1_2:61281807-61281826 Msa0082400:three_prime_UTR 25.0%
ACTCACACTCTTCTTAAAAA+TGG + chr1_2:61277817-61277836 Msa0082400:five_prime_UTR 30.0%
TCTATGTTTGAGGAATATAC+AGG + chr1_2:61277846-61277865 Msa0082400:exon 30.0%
TTGTGATTATGATGAATAGG+TGG + chr1_2:61278099-61278118 Msa0082400:intron 30.0%
TCAACTCTCAAATGATAAGA+TGG - chr1_2:61278207-61278226 None:intergenic 30.0%
! TTTTCGCTTCAGAAAAAAGT+TGG - chr1_2:61278318-61278337 None:intergenic 30.0%
AAAATGCTAGTCATGAGAAT+TGG - chr1_2:61278425-61278444 None:intergenic 30.0%
! TCTTGTTTACCTTGTATTTG+TGG - chr1_2:61278502-61278521 None:intergenic 30.0%
CCAAGAAATGGAAAATCTAT+AGG - chr1_2:61278628-61278647 None:intergenic 30.0%
! CCTATAGATTTTCCATTTCT+TGG + chr1_2:61278625-61278644 Msa0082400:CDS 30.0%
TATCAATCTTGACCAAGAAA+TGG - chr1_2:61278640-61278659 None:intergenic 30.0%
! TACAAGTCTTTTCCATTTGT+AGG + chr1_2:61278960-61278979 Msa0082400:intron 30.0%
TTTAAGAACTAACAGCAAAC+TGG - chr1_2:61279099-61279118 None:intergenic 30.0%
TTTCTCTCTCTCTAGATTTA+TGG - chr1_2:61279153-61279172 None:intergenic 30.0%
ATAAATCTAGAGAGAGAGAA+AGG + chr1_2:61279152-61279171 Msa0082400:intron 30.0%
TATTTCACGCATCAATTACT+TGG - chr1_2:61279188-61279207 None:intergenic 30.0%
ATATGATGAACTACCAAGTA+CGG - chr1_2:61279577-61279596 None:intergenic 30.0%
ATTGTATAGAAGAACGTACA+GGG + chr1_2:61279624-61279643 Msa0082400:CDS 30.0%
TCTTTCTCTGTATTTGTTTG+AGG - chr1_2:61279790-61279809 None:intergenic 30.0%
AAACAAATACAGAGAAAGAC+AGG + chr1_2:61279791-61279810 Msa0082400:CDS 30.0%
AACAAATACAGAGAAAGACA+GGG + chr1_2:61279792-61279811 Msa0082400:CDS 30.0%
CCATAATCCTGCAATAAAAT+AGG - chr1_2:61279909-61279928 None:intergenic 30.0%
! CCTATTTTATTGCAGGATTA+TGG + chr1_2:61279906-61279925 Msa0082400:intron 30.0%
!! CTAAGCTTTAAAATCCACTA+TGG - chr1_2:61280166-61280185 None:intergenic 30.0%
TATTCAACATGTGATACACA+TGG - chr1_2:61280304-61280323 None:intergenic 30.0%
ATCACATGTTGAATAATTGG+TGG + chr1_2:61280309-61280328 Msa0082400:intron 30.0%
TACTTCACAGTAAAACTATC+TGG + chr1_2:61280459-61280478 Msa0082400:intron 30.0%
! TAAAACTATCTGGTTTGACT+TGG + chr1_2:61280469-61280488 Msa0082400:intron 30.0%
! TATAGGTGGATTTCCATAAA+GGG - chr1_2:61280549-61280568 None:intergenic 30.0%
! ATATAGGTGGATTTCCATAA+AGG - chr1_2:61280550-61280569 None:intergenic 30.0%
!!! AGCCAAATAACATTTTGACT+AGG + chr1_2:61280706-61280725 Msa0082400:intron 30.0%
GACTAGGTTATTGCATATTA+TGG + chr1_2:61280722-61280741 Msa0082400:intron 30.0%
CAAGAGATTTGACAATGATA+TGG + chr1_2:61280795-61280814 Msa0082400:intron 30.0%
ATAACTACAAGCGTTATGAA+TGG - chr1_2:61280825-61280844 None:intergenic 30.0%
ATCACTTCATGATGAATCAA+GGG + chr1_2:61280919-61280938 Msa0082400:CDS 30.0%
AAATACTTGCATGGATACAT+TGG + chr1_2:61280944-61280963 Msa0082400:CDS 30.0%
TTAGGACTGTATTCATTTAC+TGG - chr1_2:61281066-61281085 None:intergenic 30.0%
TAAACACCTATGCTTTGATA+TGG + chr1_2:61281121-61281140 Msa0082400:intron 30.0%
CATATTTGATCCATTTCTGA+AGG - chr1_2:61281179-61281198 None:intergenic 30.0%
CAGAAATGGATCAAATATGA+AGG + chr1_2:61281180-61281199 Msa0082400:intron 30.0%
ATATGAAGGGATATTTCATG+TGG + chr1_2:61281194-61281213 Msa0082400:CDS 30.0%
GATGGATATAAATCGATCTA+TGG + chr1_2:61281244-61281263 Msa0082400:CDS 30.0%
ATCTTGTACCCTTCAAAAAT+TGG - chr1_2:61281339-61281358 None:intergenic 30.0%
!! ATTTTAGAAGATAGCTGCAA+AGG + chr1_2:61281866-61281885 Msa0082400:three_prime_UTR 30.0%
!! AGAATTTGTTAAGATGTCTC+AGG - chr1_2:61281895-61281914 None:intergenic 30.0%
!! TCTTATGTTGTTTCAAAGGT+TGG + chr1_2:61281912-61281931 Msa0082400:three_prime_UTR 30.0%
!! CTTATGTTGTTTCAAAGGTT+GGG + chr1_2:61281913-61281932 Msa0082400:three_prime_UTR 30.0%
GAAAGTGATACTATAGTTCA+TGG + chr1_2:61281935-61281954 Msa0082400:three_prime_UTR 30.0%
ATAAGTCAGAACCACCAATT+CGG + chr1_2:61277783-61277802 Msa0082400:five_prime_UTR 35.0%
AGTAAAAGACAACACCGAAT+TGG - chr1_2:61277800-61277819 None:intergenic 35.0%
ATGGAACACATCTATGTTTG+AGG + chr1_2:61277836-61277855 Msa0082400:exon 35.0%
ACAAGACTCAAACATGTATG+TGG - chr1_2:61277906-61277925 None:intergenic 35.0%
!!! TTCCCTGTTGACTTTGTTTT+TGG + chr1_2:61277990-61278009 Msa0082400:CDS 35.0%
!!! TCCCTGTTGACTTTGTTTTT+GGG + chr1_2:61277991-61278010 Msa0082400:CDS 35.0%
ACCCAAAAACAAAGTCAACA+GGG - chr1_2:61277995-61278014 None:intergenic 35.0%
TTGCATGGTTACTTCTCTTT+GGG - chr1_2:61278055-61278074 None:intergenic 35.0%
ATTGCATGGTTACTTCTCTT+TGG - chr1_2:61278056-61278075 None:intergenic 35.0%
GATTATGATGAATAGGTGGA+AGG + chr1_2:61278103-61278122 Msa0082400:intron 35.0%
TCATTTGAGAGTTGAGACTA+TGG + chr1_2:61278212-61278231 Msa0082400:intron 35.0%
AGCGAAAAACAATGAGAAAC+TGG + chr1_2:61278330-61278349 Msa0082400:intron 35.0%
GCGAAAAACAATGAGAAACT+GGG + chr1_2:61278331-61278350 Msa0082400:intron 35.0%
TACAAGGTAAACAAGACACA+AGG + chr1_2:61278506-61278525 Msa0082400:intron 35.0%
TGGAAAATCTATAGGCTTCA+AGG - chr1_2:61278620-61278639 None:intergenic 35.0%
!! TGCTTTTATTTCTTCCCAGA+TGG + chr1_2:61278768-61278787 Msa0082400:intron 35.0%
TAATTGTGTAGTGTGACATG+TGG - chr1_2:61278993-61279012 None:intergenic 35.0%
TTGAGGATGAATATGAAGGA+TGG + chr1_2:61279030-61279049 Msa0082400:CDS 35.0%
!! CATCAATTACTTGGTGTCTA+TGG - chr1_2:61279179-61279198 None:intergenic 35.0%
ATTGATCATATGAGCATGTG+AGG - chr1_2:61279238-61279257 None:intergenic 35.0%
TCACATGCTCATATGATCAA+TGG + chr1_2:61279237-61279256 Msa0082400:intron 35.0%
!!! GATGTGTGTTTTAGAGAGTT+CGG + chr1_2:61279409-61279428 Msa0082400:CDS 35.0%
!!! ATGTGTGTTTTAGAGAGTTC+GGG + chr1_2:61279410-61279429 Msa0082400:CDS 35.0%
CTCTCTATAATGCAAAATGG+AGG - chr1_2:61279529-61279548 None:intergenic 35.0%
GTGCTCTCTATAATGCAAAA+TGG - chr1_2:61279532-61279551 None:intergenic 35.0%
TTCAAATGTTGAGTTACCCT+TGG - chr1_2:61279554-61279573 None:intergenic 35.0%
GATTGTATAGAAGAACGTAC+AGG + chr1_2:61279623-61279642 Msa0082400:CDS 35.0%
GAGGAACAAAATGGATATGT+TGG + chr1_2:61279736-61279755 Msa0082400:CDS 35.0%
!! TTAGCGATTTTTATTTGGGC+TGG + chr1_2:61279830-61279849 Msa0082400:CDS 35.0%
!! TGAGTTACCGACTCTAAAAA+TGG + chr1_2:61279853-61279872 Msa0082400:intron 35.0%
! CTTACTGCCTATTTTATTGC+AGG + chr1_2:61279899-61279918 Msa0082400:intron 35.0%
!! ATAGGAACCCTTAACTTGTT+CGG - chr1_2:61280013-61280032 None:intergenic 35.0%
AAGGGTTCCTATGACTTTAT+TGG + chr1_2:61280021-61280040 Msa0082400:CDS 35.0%
AAGACAGAACTGAGAGATTT+CGG + chr1_2:61280093-61280112 Msa0082400:CDS 35.0%
TGTGTTGTGTTTAACCATAG+TGG + chr1_2:61280149-61280168 Msa0082400:intron 35.0%
! TATCTGATTCCCCTTTTCAT+CGG + chr1_2:61280269-61280288 Msa0082400:intron 35.0%
TTGTTTACACCGATGAAAAG+GGG - chr1_2:61280281-61280300 None:intergenic 35.0%
GTTGTTTACACCGATGAAAA+GGG - chr1_2:61280282-61280301 None:intergenic 35.0%
!! TTTGTTTTCTGTGGTTTTGC+AGG + chr1_2:61280350-61280369 Msa0082400:intron 35.0%
!! CTCTTTTAGGAAATCGTCAT+TGG + chr1_2:61280628-61280647 Msa0082400:intron 35.0%
GAGATTTGACAATGATATGG+TGG + chr1_2:61280798-61280817 Msa0082400:intron 35.0%
GGCCTAACAATTCAAACAAT+TGG - chr1_2:61280880-61280899 None:intergenic 35.0%
TGTTTGAATTGTTAGGCCAA+CGG + chr1_2:61280882-61280901 Msa0082400:intron 35.0%
CATCACTTCATGATGAATCA+AGG + chr1_2:61280918-61280937 Msa0082400:CDS 35.0%
TTACCTTAAGGAATCAAGCA+CGG - chr1_2:61280972-61280991 None:intergenic 35.0%
AGTAGCAATCACTTACCTTA+AGG - chr1_2:61280984-61281003 None:intergenic 35.0%
CACATACCATATCAAAGCAT+AGG - chr1_2:61281130-61281149 None:intergenic 35.0%
!! CATTGATGCATTTGAGTTGT+TGG + chr1_2:61281222-61281241 Msa0082400:CDS 35.0%
! AAATTGGCTGTACCATTTTG+CGG - chr1_2:61281323-61281342 None:intergenic 35.0%
! ATGGTACAGCCAATTTTTGA+AGG + chr1_2:61281327-61281346 Msa0082400:CDS 35.0%
! TGGTACAGCCAATTTTTGAA+GGG + chr1_2:61281328-61281347 Msa0082400:CDS 35.0%
GATTCATCACTTGTTTCAGT+TGG + chr1_2:61281391-61281410 Msa0082400:CDS 35.0%
TGGACATTTACTTCTGTAGT+AGG + chr1_2:61281411-61281430 Msa0082400:exon 35.0%
!! GAGAGTCTTTTCAGTTTTGT+CGG + chr1_2:61281484-61281503 Msa0082400:three_prime_UTR 35.0%
TTGCATACACAGATGAATAG+TGG - chr1_2:61281581-61281600 None:intergenic 35.0%
GAGTGATCTCACATTAACAA+TGG + chr1_2:61281613-61281632 Msa0082400:three_prime_UTR 35.0%
TGGTATCTACTTCTTCGATT+TGG + chr1_2:61281633-61281652 Msa0082400:three_prime_UTR 35.0%
GGTATCTACTTCTTCGATTT+GGG + chr1_2:61281634-61281653 Msa0082400:three_prime_UTR 35.0%
! GAAGTTCTTTGAGAAATCTG+AGG + chr1_2:61281677-61281696 Msa0082400:three_prime_UTR 35.0%
GTAGTCATGACTAACTCTAA+TGG + chr1_2:61281699-61281718 Msa0082400:three_prime_UTR 35.0%
GCAATAAAGAAAAGACAGGT+TGG - chr1_2:61281736-61281755 None:intergenic 35.0%
! TCAAGTGAAGTACTCAACTA+TGG - chr1_2:61282000-61282019 None:intergenic 35.0%
AAAAGACAACACCGAATTGG+TGG - chr1_2:61277797-61277816 None:intergenic 40.0%
TTGCTTCTAAACTTGGCTGT+TGG + chr1_2:61277933-61277952 Msa0082400:CDS 40.0%
TGCTTCTAAACTTGGCTGTT+GGG + chr1_2:61277934-61277953 Msa0082400:CDS 40.0%
GACCCAAAAACAAAGTCAAC+AGG - chr1_2:61277996-61278015 None:intergenic 40.0%
!!! GTTGACTTTGTTTTTGGGTC+AGG + chr1_2:61277996-61278015 Msa0082400:CDS 40.0%
AAAGAGAACCTGATATGCAG+AGG - chr1_2:61278024-61278043 None:intergenic 40.0%
TGCATGGTTACTTCTCTTTG+GGG - chr1_2:61278054-61278073 None:intergenic 40.0%
TATTTCTTCCCAGATGGTAG+AGG + chr1_2:61278774-61278793 Msa0082400:intron 40.0%
TTGTAGTACTGCAATCCCTT+CGG - chr1_2:61278810-61278829 None:intergenic 40.0%
TGTGGTTGGATTCCTACAAA+TGG - chr1_2:61278975-61278994 None:intergenic 40.0%
ACACAATTATGATCTCCCAC+AGG + chr1_2:61279004-61279023 Msa0082400:CDS 40.0%
GCACTTGAGGATGAATATGA+AGG + chr1_2:61279026-61279045 Msa0082400:CDS 40.0%
!!! TGTGTGTTTTAGAGAGTTCG+GGG + chr1_2:61279411-61279430 Msa0082400:CDS 40.0%
CTACCTACAGCGAAGATATT+GGG - chr1_2:61279469-61279488 None:intergenic 40.0%
ACTACCTACAGCGAAGATAT+TGG - chr1_2:61279470-61279489 None:intergenic 40.0%
GCTGTAGGTAGTTATGATCA+AGG + chr1_2:61279478-61279497 Msa0082400:CDS 40.0%
!! TTGCATTATAGAGAGCACCA+AGG + chr1_2:61279534-61279553 Msa0082400:CDS 40.0%
!! TGCATTATAGAGAGCACCAA+GGG + chr1_2:61279535-61279554 Msa0082400:CDS 40.0%
CTCAACATTTGAACCGTACT+TGG + chr1_2:61279561-61279580 Msa0082400:CDS 40.0%
!! CTAGAGACTTGTTACATTGC+AGG + chr1_2:61279714-61279733 Msa0082400:intron 40.0%
ACATTGCAGGAGGAACAAAA+TGG + chr1_2:61279727-61279746 Msa0082400:intron 40.0%
ATTATGGAACCCTTGTTGCA+CGG + chr1_2:61279922-61279941 Msa0082400:CDS 40.0%
TCGTGAATCCGAACAAGTTA+AGG + chr1_2:61280002-61280021 Msa0082400:CDS 40.0%
CGTGAATCCGAACAAGTTAA+GGG + chr1_2:61280003-61280022 Msa0082400:CDS 40.0%
GGTTGTTTACACCGATGAAA+AGG - chr1_2:61280283-61280302 None:intergenic 40.0%
GGAAATACTTGGAGAGAATG+AGG + chr1_2:61280379-61280398 Msa0082400:CDS 40.0%
ACTTGGAGAGAATGAGGTAA+CGG + chr1_2:61280385-61280404 Msa0082400:intron 40.0%
GACACATTCAAGACCCTTTA+TGG + chr1_2:61280533-61280552 Msa0082400:CDS 40.0%
TGACGTTGAATAGTGAGTTG+CGG + chr1_2:61280659-61280678 Msa0082400:intron 40.0%
TCAAGGGTGAAATACTTGCA+TGG + chr1_2:61280935-61280954 Msa0082400:CDS 40.0%
!! GATGCATTTGAGTTGTTGGA+TGG + chr1_2:61281226-61281245 Msa0082400:CDS 40.0%
TTTGGGTATCTTCTCAACTC+TGG - chr1_2:61281295-61281314 None:intergenic 40.0%
! ACCATTTTGCGGATAGCTTT+GGG - chr1_2:61281312-61281331 None:intergenic 40.0%
! TACCATTTTGCGGATAGCTT+TGG - chr1_2:61281313-61281332 None:intergenic 40.0%
!! TGGTGCTATTGAGCTCAATA+AGG + chr1_2:61281369-61281388 Msa0082400:CDS 40.0%
!! TTTCAGTTTTGTCGGTTAGC+TGG + chr1_2:61281492-61281511 Msa0082400:three_prime_UTR 40.0%
TTCCAGATGCAAGTCATCTT+TGG + chr1_2:61281779-61281798 Msa0082400:three_prime_UTR 40.0%
! AACCAAAGATGACTTGCATC+TGG - chr1_2:61281784-61281803 None:intergenic 40.0%
! GCAAGTCATCTTTGGTTTCT+AGG + chr1_2:61281787-61281806 Msa0082400:three_prime_UTR 40.0%
GCTTCTAAACTTGGCTGTTG+GGG + chr1_2:61277935-61277954 Msa0082400:CDS 45.0%
ATGGAAGAACTCCCAGCATT+TGG + chr1_2:61278140-61278159 Msa0082400:CDS 45.0%
TGGAAGAACTCCCAGCATTT+GGG + chr1_2:61278141-61278160 Msa0082400:CDS 45.0%
!! GCAAAGGTATCCCAAATGCT+GGG - chr1_2:61278154-61278173 None:intergenic 45.0%
!! TGCAAAGGTATCCCAAATGC+TGG - chr1_2:61278155-61278174 None:intergenic 45.0%
TCACTAACCAGCATGTGCAA+AGG - chr1_2:61278170-61278189 None:intergenic 45.0%
ATACAAAAAGGGTTTGCCCG+TGG + chr1_2:61278446-61278465 Msa0082400:intron 45.0%
TACATCTCCATTTCCTCCAC+GGG - chr1_2:61278465-61278484 None:intergenic 45.0%
CTACATCTCCATTTCCTCCA+CGG - chr1_2:61278466-61278485 None:intergenic 45.0%
CGACACGTACCACAAATACA+AGG + chr1_2:61278490-61278509 Msa0082400:CDS 45.0%
TGTAGTACTGCAATCCCTTC+GGG - chr1_2:61278809-61278828 None:intergenic 45.0%
TGTGTAGTGTGACATGTGGT+TGG - chr1_2:61278989-61279008 None:intergenic 45.0%
ATTCATCCTCAAGTGCCTGT+GGG - chr1_2:61279022-61279041 None:intergenic 45.0%
TATTCATCCTCAAGTGCCTG+TGG - chr1_2:61279023-61279042 None:intergenic 45.0%
TCGGGGATAGAGTCAAGTAT+TGG + chr1_2:61279428-61279447 Msa0082400:CDS 45.0%
!! GAGACTTGTTACATTGCAGG+AGG + chr1_2:61279717-61279736 Msa0082400:intron 45.0%
AGACTATCCCGATTCCATGA+AGG + chr1_2:61279945-61279964 Msa0082400:CDS 45.0%
!! GCATTAGCCTTCATGGAATC+GGG - chr1_2:61279955-61279974 None:intergenic 45.0%
!! CGCATTAGCCTTCATGGAAT+CGG - chr1_2:61279956-61279975 None:intergenic 45.0%
CGATTCCATGAAGGCTAATG+CGG + chr1_2:61279954-61279973 Msa0082400:CDS 45.0%
GATTCCATGAAGGCTAATGC+GGG + chr1_2:61279955-61279974 Msa0082400:CDS 45.0%
GATTCACGACTTGAGAAGGT+AGG - chr1_2:61279991-61280010 None:intergenic 45.0%
TTCGGATTCACGACTTGAGA+AGG - chr1_2:61279995-61280014 None:intergenic 45.0%
GCAGGTGTAGAGGAAATACT+TGG + chr1_2:61280368-61280387 Msa0082400:intron 45.0%
TCAGTACCCATTCACACCAT+GGG + chr1_2:61280493-61280512 Msa0082400:intron 45.0%
CTAAAGCCCATGGTGTGAAT+GGG - chr1_2:61280502-61280521 None:intergenic 45.0%
! ATGGGCTGTACTATGTCGAT+AGG + chr1_2:61281263-61281282 Msa0082400:CDS 45.0%
ACCCAAAGCTATCCGCAAAA+TGG + chr1_2:61281308-61281327 Msa0082400:CDS 45.0%
GAGCTCAATAGCACCAACTA+GGG - chr1_2:61281365-61281384 None:intergenic 45.0%
TGAGCTCAATAGCACCAACT+AGG - chr1_2:61281366-61281385 None:intergenic 45.0%
TCGCATAGTTCACGCATAGA+TGG - chr1_2:61281846-61281865 None:intergenic 45.0%
GAAGGAGCTGCTGATGAAGA+TGG + chr1_2:61278121-61278140 Msa0082400:CDS 50.0%
TGGGATACCTTTGCACATGC+TGG + chr1_2:61278160-61278179 Msa0082400:CDS 50.0%
GTATTTGTGGTACGTGTCGC+AGG - chr1_2:61278489-61278508 None:intergenic 50.0%
GTGCAGCTCATGCTTGAAAC+AGG + chr1_2:61278594-61278613 Msa0082400:CDS 50.0%
TGAAGGATGGCTTAGTCGTG+AGG + chr1_2:61279043-61279062 Msa0082400:CDS 50.0%
CAGCAAACTGGTGCAGCTAT+AGG - chr1_2:61279087-61279106 None:intergenic 50.0%
GAGCCCAATATCTTCGCTGT+AGG + chr1_2:61279463-61279482 Msa0082400:CDS 50.0%
ATCAAGGAATCTCCCCACCT+AGG + chr1_2:61279494-61279513 Msa0082400:CDS 50.0%
AATGGAGGAGAACATCGCCT+AGG - chr1_2:61279514-61279533 None:intergenic 50.0%
GGATAGTCTCCGTGCAACAA+GGG - chr1_2:61279934-61279953 None:intergenic 50.0%
!! CTGTGGTTTTGCAGGTGTAG+AGG + chr1_2:61280358-61280377 Msa0082400:intron 50.0%
CTCAGTACCCATTCACACCA+TGG + chr1_2:61280492-61280511 Msa0082400:intron 50.0%
CCTAAAGCCCATGGTGTGAA+TGG - chr1_2:61280503-61280522 None:intergenic 50.0%
CCATTCACACCATGGGCTTT+AGG + chr1_2:61280500-61280519 Msa0082400:CDS 50.0%
AGCACTTGTCCTAAAGCCCA+TGG - chr1_2:61280512-61280531 None:intergenic 50.0%
!! ATGGGCTTTAGGACAAGTGC+TGG + chr1_2:61280511-61280530 Msa0082400:CDS 50.0%
AATAGTGAGTTGCGGCGCTA+AGG + chr1_2:61280667-61280686 Msa0082400:intron 50.0%
ATGCGTTGCTTAGTGTCCGT+TGG - chr1_2:61280901-61280920 None:intergenic 50.0%
GTGCCGTGCTTGATTCCTTA+AGG + chr1_2:61280966-61280985 Msa0082400:CDS 50.0%
GGTACAAGATCCTCCCTAGT+TGG + chr1_2:61281349-61281368 Msa0082400:CDS 50.0%
CTCAATAGCACCAACTAGGG+AGG - chr1_2:61281362-61281381 None:intergenic 50.0%
!! TTTGTCGGTTAGCTGGTTCG+TGG + chr1_2:61281499-61281518 Msa0082400:three_prime_UTR 50.0%
GTCAGGCACCTCTGCATATC+AGG + chr1_2:61278013-61278032 Msa0082400:CDS 55.0%
CAAAAAGGGTTTGCCCGTGG+AGG + chr1_2:61278449-61278468 Msa0082400:intron 55.0%
! TGACGGGTCCTCTACCATCT+GGG - chr1_2:61278785-61278804 None:intergenic 55.0%
! TTGACGGGTCCTCTACCATC+TGG - chr1_2:61278786-61278805 None:intergenic 55.0%
!! TGCAATCCCTTCGGGTTGAC+GGG - chr1_2:61278801-61278820 None:intergenic 55.0%
!! CTGCAATCCCTTCGGGTTGA+CGG - chr1_2:61278802-61278821 None:intergenic 55.0%
TGATCTCCCACAGGCACTTG+AGG + chr1_2:61279013-61279032 Msa0082400:CDS 55.0%
AGGAGAACATCGCCTAGGTG+GGG - chr1_2:61279509-61279528 None:intergenic 55.0%
GAGGAGAACATCGCCTAGGT+GGG - chr1_2:61279510-61279529 None:intergenic 55.0%
GGGATAGTCTCCGTGCAACA+AGG - chr1_2:61279935-61279954 None:intergenic 55.0%
! GAGAGATTTCGGTGCAGACG+CGG + chr1_2:61280104-61280123 Msa0082400:CDS 55.0%
GGGTTTGCCCGTGGAGGAAA+TGG + chr1_2:61278455-61278474 Msa0082400:intron 60.0%
TAGAGGACCCGTCAACCCGA+AGG + chr1_2:61278791-61278810 Msa0082400:CDS 60.0%
AGAGGACCCGTCAACCCGAA+GGG + chr1_2:61278792-61278811 Msa0082400:CDS 60.0%
GGAGGAGAACATCGCCTAGG+TGG - chr1_2:61279511-61279530 None:intergenic 60.0%
!! TGCGCCCGCATTAGCCTTCA+TGG - chr1_2:61279962-61279981 None:intergenic 60.0%
!! GACGCGGCTGCAAAGGCACT+TGG + chr1_2:61280120-61280139 Msa0082400:CDS 65.0%
CGGTGCAGACGCGGCTGCAA+AGG + chr1_2:61280113-61280132 Msa0082400:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 61277765 61282076 61277765 ID=Msa0082400;Name=Msa0082400
chr1_2 mRNA 61277765 61282076 61277765 ID=Msa0082400-mRNA-1;Parent=Msa0082400;Name=Msa0082400-mRNA-1;_AED=0.15;_eAED=0.15;_QI=84|1|1|1|1|1|13|647|530
chr1_2 exon 61277765 61278034 61277765 ID=Msa0082400-mRNA-1:exon:20135;Parent=Msa0082400-mRNA-1
chr1_2 exon 61278118 61278181 61278118 ID=Msa0082400-mRNA-1:exon:20136;Parent=Msa0082400-mRNA-1
chr1_2 exon 61278456 61278511 61278456 ID=Msa0082400-mRNA-1:exon:20137;Parent=Msa0082400-mRNA-1
chr1_2 exon 61278588 61278663 61278588 ID=Msa0082400-mRNA-1:exon:20138;Parent=Msa0082400-mRNA-1
chr1_2 exon 61278787 61278858 61278787 ID=Msa0082400-mRNA-1:exon:20139;Parent=Msa0082400-mRNA-1
chr1_2 exon 61278982 61279069 61278982 ID=Msa0082400-mRNA-1:exon:20140;Parent=Msa0082400-mRNA-1
chr1_2 exon 61279387 61279645 61279387 ID=Msa0082400-mRNA-1:exon:20141;Parent=Msa0082400-mRNA-1
chr1_2 exon 61279736 61279851 61279736 ID=Msa0082400-mRNA-1:exon:20142;Parent=Msa0082400-mRNA-1
chr1_2 exon 61279921 61280141 61279921 ID=Msa0082400-mRNA-1:exon:20143;Parent=Msa0082400-mRNA-1
chr1_2 exon 61280372 61280400 61280372 ID=Msa0082400-mRNA-1:exon:20144;Parent=Msa0082400-mRNA-1
chr1_2 exon 61280497 61280584 61280497 ID=Msa0082400-mRNA-1:exon:20145;Parent=Msa0082400-mRNA-1
chr1_2 exon 61280897 61280987 61280897 ID=Msa0082400-mRNA-1:exon:20146;Parent=Msa0082400-mRNA-1
chr1_2 exon 61281183 61282076 61281183 ID=Msa0082400-mRNA-1:exon:20147;Parent=Msa0082400-mRNA-1
chr1_2 five_prime_UTR 61277765 61277848 61277765 ID=Msa0082400-mRNA-1:five_prime_utr;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61277849 61278034 61277849 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61278118 61278181 61278118 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61278456 61278511 61278456 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61278588 61278663 61278588 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61278787 61278858 61278787 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61278982 61279069 61278982 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61279387 61279645 61279387 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61279736 61279851 61279736 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61279921 61280141 61279921 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61280372 61280400 61280372 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61280497 61280584 61280497 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61280897 61280987 61280897 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 CDS 61281183 61281429 61281183 ID=Msa0082400-mRNA-1:cds;Parent=Msa0082400-mRNA-1
chr1_2 three_prime_UTR 61281430 61282076 61281430 ID=Msa0082400-mRNA-1:three_prime_utr;Parent=Msa0082400-mRNA-1
Gene Sequence

>Msa0082400

ATGTTTGAGGAATATACAGGAAAAAAAAAACAAAAAAAAAAATTGATGATGGAACCACATACATGTTTGAGTCTTGTTTTCTTTTTGCTTCTAAACTTGGCTGTTGGGGTGTTAAGTACTGATGATTATAGCAGACATGATTTCCCTGTTGACTTTGTTTTTGGGTCAGGCACCTCTGCATATCAGGTGGAAGGAGCTGCTGATGAAGATGGAAGAACTCCCAGCATTTGGGATACCTTTGCACATGCTGGGTTTGCCCGTGGAGGAAATGGAGATGTAGCCTGCGACACGTACCACAAATACAAGGAAGATGTGCAGCTCATGCTTGAAACAGGCCTTGAAGCCTATAGATTTTCCATTTCTTGGTCAAGATTGATACCAAATGGTAGAGGACCCGTCAACCCGAAGGGATTGCAGTACTACAACAATCTTATCAATGAACTCATTAGAAATGGAATCCAACCACATGTCACACTACACAATTATGATCTCCCACAGGCACTTGAGGATGAATATGAAGGATGGCTTAGTCGTGAGGTCATAAAAGACTTCACAAACTATGCAGATGTGTGTTTTAGAGAGTTCGGGGATAGAGTCAAGTATTGGACTACTGTGAACGAGCCCAATATCTTCGCTGTAGGTAGTTATGATCAAGGAATCTCCCCACCTAGGCGATGTTCTCCTCCATTTTGCATTATAGAGAGCACCAAGGGTAACTCAACATTTGAACCGTACTTGGTAGTTCATCATATTTTGCTAGCGCATTCTTCAGCTGTGAGATTGTATAGAAGAACGTACAGGGAGGAACAAAATGGATATGTTGGTATCTCAATATATACATTTGGGTCAGTTCCTCAAACAAATACAGAGAAAGACAGGGCTGCATGTCAACGAATTAGCGATTTTTATTTGGGCTGGATTATGGAACCCTTGTTGCACGGAGACTATCCCGATTCCATGAAGGCTAATGCGGGCGCAAGAATTCCTACCTTCTCAAGTCGTGAATCCGAACAAGTTAAGGGTTCCTATGACTTTATTGGCATAATTCACTACAGCAAATTAAATATCACAGACAATTCTGATGTGCTGAAGACAGAACTGAGAGATTTCGGTGCAGACGCGGCTGCAAAGGCACTTGGTGTAGAGGAAATACTTGGAGAGAATGAGTACCCATTCACACCATGGGCTTTAGGACAAGTGCTGGACACATTCAAGACCCTTTATGGAAATCCACCTATATTCATTCATGAAAATGGCCAACGGACACTAAGCAACGCATCACTTCATGATGAATCAAGGGTGAAATACTTGCATGGATACATTGGTGCCGTGCTTGATTCCTTAAGAAATGGATCAAATATGAAGGGATATTTCATGTGGTCTTTCATTGATGCATTTGAGTTGTTGGATGGATATAAATCGATCTATGGGCTGTACTATGTCGATAGGAATGATCCAGAGTTGAGAAGATACCCAAAGCTATCCGCAAAATGGTACAGCCAATTTTTGAAGGGTACAAGATCCTCCCTAGTTGGTGCTATTGAGCTCAATAAGGATTCATCACTTGTTTCAGTTGGACATTTACTTCTGTAG
Protein sequence

>Msa0082400

MFEEYTGKKKQKKKLMMEPHTCLSLVFFLLLNLAVGVLSTDDYSRHDFPVDFVFGSGTSAYQVEGAADEDGRTPSIWDTFAHAGFARGGNGDVACDTYHKYKEDVQLMLETGLEAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELIRNGIQPHVTLHNYDLPQALEDEYEGWLSREVIKDFTNYADVCFREFGDRVKYWTTVNEPNIFAVGSYDQGISPPRRCSPPFCIIESTKGNSTFEPYLVVHHILLAHSSAVRLYRRTYREEQNGYVGISIYTFGSVPQTNTEKDRAACQRISDFYLGWIMEPLLHGDYPDSMKANAGARIPTFSSRESEQVKGSYDFIGIIHYSKLNITDNSDVLKTELRDFGADAAAKALGVEEILGENEYPFTPWALGQVLDTFKTLYGNPPIFIHENGQRTLSNASLHDESRVKYLHGYIGAVLDSLRNGSNMKGYFMWSFIDAFELLDGYKSIYGLYYVDRNDPELRRYPKLSAKWYSQFLKGTRSSLVGAIELNKDSSLVSVGHLLL*