AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0082250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0082250 MtrunA17_Chr1g0195611 79.926 543 71 8 2 535 1 514 0.0 860
Msa0082250 MtrunA17_Chr5g0428831 80.331 544 68 9 2 535 1 515 0.0 853
Msa0082250 MtrunA17_Chr1g0195641 81.750 400 46 5 2 401 1 373 0.0 635
Msa0082250 MtrunA17_Chr7g0242691 50.763 524 224 8 20 534 21 519 1.05e-180 518
Msa0082250 MtrunA17_Chr4g0006971 52.652 509 209 8 28 529 27 510 5.90e-179 514
Msa0082250 MtrunA17_Chr7g0242681 51.456 515 213 9 29 534 39 525 3.82e-175 504
Msa0082250 MtrunA17_Chr4g0043091 41.187 539 240 16 1 512 17 505 2.80e-131 391
Msa0082250 MtrunA17_Chr4g0033311 40.891 516 243 14 22 509 33 514 2.70e-120 364
Msa0082250 MtrunA17_Chr4g0010501 41.571 522 247 13 8 509 10 493 6.26e-117 354
Msa0082250 MtrunA17_Chr2g0329201 40.076 524 263 15 10 509 10 506 1.19e-116 354
Msa0082250 MtrunA17_Chr6g0482131 40.388 515 257 13 19 509 23 511 3.39e-116 353
Msa0082250 MtrunA17_Chr4g0033331 40.594 505 244 13 29 508 40 513 6.95e-116 352
Msa0082250 MtrunA17_Chr6g0482081 40.421 522 248 16 19 509 23 512 8.50e-115 350
Msa0082250 MtrunA17_Chr4g0033321 40.396 505 245 13 29 508 34 507 1.42e-114 349
Msa0082250 MtrunA17_Chr2g0329191 40.347 518 242 15 22 509 28 508 1.67e-114 348
Msa0082250 MtrunA17_Chr3g0088441 38.835 515 255 14 22 509 32 513 4.42e-114 348
Msa0082250 MtrunA17_Chr4g0033341 39.764 508 256 11 23 509 64 542 5.93e-114 348
Msa0082250 MtrunA17_Chr2g0317841 38.390 534 266 14 5 511 9 506 1.18e-113 347
Msa0082250 MtrunA17_Chr4g0033271 40.112 536 254 15 10 511 10 512 1.58e-113 346
Msa0082250 MtrunA17_Chr4g0033191 39.842 507 255 11 27 511 42 520 1.59e-113 347
Msa0082250 MtrunA17_Chr4g0033401 40.198 505 246 13 29 508 35 508 5.39e-113 345
Msa0082250 MtrunA17_Chr2g0317821 38.068 528 276 13 5 511 9 506 4.32e-112 343
Msa0082250 MtrunA17_Chr4g0033201 38.868 530 267 13 11 509 8 511 3.61e-111 340
Msa0082250 MtrunA17_Chr3g0087261 38.323 501 259 12 28 508 37 507 6.13e-111 339
Msa0082250 MtrunA17_Chr6g0482951 37.970 532 276 13 3 508 7 510 6.28e-109 334
Msa0082250 MtrunA17_Chr6g0482941 38.346 532 274 12 3 508 7 510 9.86e-109 334
Msa0082250 MtrunA17_Chr6g0482071 38.603 544 265 16 10 514 4 517 3.46e-108 333
Msa0082250 MtrunA17_Chr3g0090131 38.703 509 243 17 26 509 19 483 1.48e-106 327
Msa0082250 MtrunA17_Chr4g0042171 37.037 540 281 16 9 523 8 513 6.65e-105 324
Msa0082250 MtrunA17_Chr3g0087271 37.675 499 265 12 28 508 38 508 9.23e-105 323
Msa0082250 MtrunA17_Chr2g0329321 36.595 511 246 9 22 509 32 487 1.95e-104 322
Msa0082250 MtrunA17_Chr4g0074551 34.783 529 294 13 10 516 31 530 4.38e-101 315
Msa0082250 MtrunA17_Chr3g0090111 37.624 505 247 16 29 509 20 480 6.64e-101 313
Msa0082250 MtrunA17_Chr4g0074561 35.211 497 275 11 33 508 40 510 8.58e-101 314
Msa0082250 MtrunA17_Chr2g0288021 36.398 522 284 11 7 508 14 507 1.13e-100 313
Msa0082250 MtrunA17_Chr2g0288071 34.594 529 295 12 10 515 47 547 1.37e-98 309
Msa0082250 MtrunA17_Chr5g0430451 37.066 518 251 13 18 509 29 497 3.68e-98 306
Msa0082250 MtrunA17_Chr4g0033261 37.747 506 235 14 29 509 42 492 6.33e-98 305
Msa0082250 MtrunA17_Chr4g0033231 36.111 504 244 14 30 509 43 492 1.10e-97 305
Msa0082250 MtrunA17_Chr5g0418871 46.784 342 154 9 47 385 2 318 3.14e-95 293
Msa0082250 MtrunA17_Chr4g0006131 34.570 512 256 10 29 512 43 503 7.66e-92 290
Msa0082250 MtrunA17_Chr4g0006111 34.030 526 260 17 19 509 51 524 1.62e-88 282
Msa0082250 MtrunA17_Chr7g0234131 33.198 494 279 15 29 508 76 532 6.94e-75 246
Msa0082250 MtrunA17_Chr7g0234111 32.271 502 286 14 22 508 69 531 4.00e-72 239
Msa0082250 MtrunA17_Chr7g0234091 31.928 498 279 15 29 508 76 531 3.13e-71 237
Msa0082250 MtrunA17_Chr2g0301231 33.638 437 212 13 99 509 7 391 8.74e-62 208
Msa0082250 MtrunA17_Chr3g0087201 34.911 338 193 9 186 508 17 342 3.16e-56 192
Msa0082250 MtrunA17_Chr7g0230651 34.576 295 160 9 68 360 14 277 9.73e-53 184
Msa0082250 MtrunA17_Chr1g0195651 98.701 77 1 0 459 535 1 77 6.29e-47 158
Msa0082250 MtrunA17_Chr3g0087191 48.913 184 67 5 10 185 1 165 1.23e-45 158
Msa0082250 MtrunA17_Chr7g0236731 36.073 219 117 6 165 372 63 269 5.60e-38 141
Msa0082250 MtrunA17_Chr7g0227561 31.208 298 142 9 30 322 48 287 7.04e-38 141
Msa0082250 MtrunA17_Chr8g0352881 45.161 93 50 1 286 377 68 160 1.10e-19 86.3
Msa0082250 MtrunA17_Chr8g0352881 72.222 54 13 1 36 87 6 59 1.78e-18 82.8
Msa0082250 MtrunA17_Chr5g0418861 47.436 78 39 2 432 508 14 90 1.10e-17 78.2
Msa0082250 MtrunA17_Chr2g0288031 46.774 62 31 1 194 255 4 63 6.47e-13 63.9
Msa0082250 MtrunA17_Chr7g0227591 51.852 54 25 1 455 508 13 65 2.45e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0082250 AT1G02850.2 55.870 494 187 8 23 511 21 488 0.0 546
Msa0082250 AT1G02850.5 53.516 512 194 6 23 511 21 511 0.0 543
Msa0082250 AT1G02850.4 53.411 513 194 7 23 511 21 512 0.0 539
Msa0082250 AT1G02850.1 53.846 494 170 6 23 511 21 461 0.0 524
Msa0082250 AT1G45191.6 47.646 531 232 12 1 515 1 501 1.84e-162 472
Msa0082250 AT1G45191.4 48.375 523 229 12 1 515 1 490 4.64e-162 471
Msa0082250 AT1G45191.2 48.387 527 229 12 1 515 1 496 1.87e-161 469
Msa0082250 AT4G27830.1 47.692 520 229 12 2 511 1 487 9.24e-161 467
Msa0082250 AT1G45191.1 46.765 541 234 12 1 515 1 513 1.18e-160 468
Msa0082250 AT1G60090.1 46.947 524 225 10 11 515 7 496 1.34e-158 462
Msa0082250 AT1G60090.2 47.013 519 225 9 11 515 7 489 5.51e-156 455
Msa0082250 AT4G22100.1 47.249 527 219 13 7 515 4 489 1.86e-155 454
Msa0082250 AT1G02850.3 53.659 410 151 5 23 414 21 409 1.34e-153 446
Msa0082250 AT4G27820.1 46.400 500 221 11 25 511 20 485 1.85e-146 431
Msa0082250 AT3G62750.1 45.753 518 218 11 12 511 4 476 4.28e-141 417
Msa0082250 AT3G62750.2 45.753 518 218 11 12 511 30 502 8.67e-141 417
Msa0082250 AT3G62740.1 44.094 508 243 13 12 511 7 481 4.30e-136 404
Msa0082250 AT1G45191.5 53.261 368 143 7 1 367 1 340 2.22e-129 384
Msa0082250 AT1G45191.3 53.261 368 143 7 1 367 1 340 2.40e-129 384
Msa0082250 AT4G27830.2 46.387 429 190 9 93 511 1 399 1.90e-124 371
Msa0082250 AT1G26560.1 39.921 506 256 13 27 511 31 509 4.36e-122 369
Msa0082250 AT1G60270.1 52.941 357 137 8 14 368 10 337 2.30e-121 362
Msa0082250 AT2G44480.1 40.909 506 248 14 30 513 37 513 1.44e-119 362
Msa0082250 AT2G44480.3 40.909 506 248 14 30 513 68 544 3.33e-119 362
Msa0082250 AT3G18080.1 38.889 504 262 9 23 509 34 508 1.74e-116 354
Msa0082250 AT3G62750.4 44.276 463 195 11 12 456 30 447 3.85e-114 346
Msa0082250 AT4G27820.2 43.981 432 197 10 93 511 1 400 1.35e-113 343
Msa0082250 AT4G27820.3 43.981 432 197 10 93 511 1 400 1.35e-113 343
Msa0082250 AT3G62750.7 50.418 359 139 7 12 367 4 326 2.48e-112 338
Msa0082250 AT3G62750.8 50.418 359 139 7 12 367 4 326 2.48e-112 338
Msa0082250 AT3G62750.3 47.704 392 160 9 12 397 30 382 5.79e-112 340
Msa0082250 AT5G44640.1 40.077 519 265 14 10 508 9 501 2.07e-111 341
Msa0082250 AT3G62740.2 42.667 450 217 13 12 453 7 423 4.15e-110 335
Msa0082250 AT2G44450.1 40.119 506 262 12 18 508 21 500 1.11e-109 336
Msa0082250 AT2G25630.1 39.731 521 258 15 10 514 9 489 2.20e-109 335
Msa0082250 AT5G42260.1 40.000 515 263 14 10 504 9 497 2.89e-109 335
Msa0082250 AT3G18070.3 37.747 506 257 11 23 509 25 491 1.03e-106 328
Msa0082250 AT1G61820.1 37.170 530 269 14 11 509 9 505 2.23e-106 328
Msa0082250 AT3G18070.1 37.747 506 263 11 23 509 25 497 9.40e-106 326
Msa0082250 AT5G54570.1 37.500 512 263 15 23 508 25 505 5.77e-105 325
Msa0082250 AT3G60130.1 39.563 503 252 15 30 511 32 503 2.82e-103 320
Msa0082250 AT3G62750.6 42.396 434 192 9 93 511 1 391 3.38e-103 317
Msa0082250 AT3G62750.5 42.396 434 192 9 93 511 1 391 3.38e-103 317
Msa0082250 AT3G60140.1 34.502 542 292 15 10 524 8 513 9.12e-99 310
Msa0082250 AT5G24550.1 37.476 515 263 16 23 509 27 510 2.26e-98 308
Msa0082250 AT1G61810.1 36.673 499 266 14 33 509 38 508 1.35e-96 303
Msa0082250 AT3G60120.1 35.503 507 276 13 26 509 12 490 1.12e-95 301
Msa0082250 AT5G36890.1 36.553 528 258 18 15 514 7 485 1.45e-95 299
Msa0082250 AT5G36890.2 36.553 528 258 18 15 514 7 485 1.50e-95 299
Msa0082250 AT2G44470.3 36.653 502 268 15 30 508 31 505 3.73e-95 301
Msa0082250 AT1G52400.3 36.127 537 283 17 5 509 8 516 5.62e-95 299
Msa0082250 AT1G52400.1 36.127 537 283 17 5 509 8 516 5.62e-95 299
Msa0082250 AT2G44480.2 38.864 440 221 13 93 513 1 411 3.21e-94 293
Msa0082250 AT3G03640.1 33.871 558 304 14 7 527 2 531 1.32e-93 295
Msa0082250 AT4G21760.1 36.032 494 267 13 33 513 59 516 1.73e-92 293
Msa0082250 AT4G21760.2 35.050 505 267 13 33 513 59 526 4.62e-92 292
Msa0082250 AT2G44480.4 45.820 323 144 8 29 346 67 363 6.49e-92 287
Msa0082250 AT2G44490.1 35.630 508 269 18 30 509 16 493 7.66e-92 292
Msa0082250 AT1G61810.3 36.688 477 254 13 33 487 38 488 1.97e-91 290
Msa0082250 AT1G51470.1 35.897 507 265 16 24 508 41 509 2.43e-91 289
Msa0082250 AT1G66270.2 35.755 523 279 14 24 521 32 522 3.61e-91 289
Msa0082250 AT5G54570.3 42.276 369 178 8 23 384 25 365 4.07e-91 286
Msa0082250 AT1G47600.1 36.095 507 264 17 24 508 41 509 2.76e-90 286
Msa0082250 AT3G21370.1 35.714 518 267 17 24 509 29 512 2.82e-90 287
Msa0082250 AT1G66270.1 35.564 523 282 14 24 521 32 524 7.54e-90 286
Msa0082250 AT1G47600.2 35.968 506 265 17 24 508 41 508 1.33e-89 285
Msa0082250 AT5G24540.1 37.549 514 264 16 23 509 27 510 2.24e-89 285
Msa0082250 AT2G32860.1 34.722 504 275 14 30 508 96 570 2.26e-89 287
Msa0082250 AT1G75940.1 35.135 518 271 14 24 508 32 517 9.77e-89 283
Msa0082250 AT1G66280.1 35.115 524 283 14 24 521 32 524 1.23e-88 282
Msa0082250 AT5G25980.2 34.351 524 278 14 17 511 39 525 1.27e-88 283
Msa0082250 AT3G09260.1 35.125 521 286 15 25 521 32 524 1.47e-88 282
Msa0082250 AT2G44460.1 35.338 532 291 13 2 508 1 504 3.81e-88 283
Msa0082250 AT1G60270.2 51.439 278 105 7 93 368 1 250 8.33e-88 273
Msa0082250 AT2G32860.2 34.387 506 275 15 30 508 96 571 3.02e-87 281
Msa0082250 AT3G60140.2 38.781 361 183 7 10 361 8 339 1.05e-86 275
Msa0082250 AT5G28510.1 33.902 528 288 16 25 521 36 533 1.59e-86 277
Msa0082250 AT3G18070.4 40.833 360 181 7 23 380 25 354 1.03e-85 270
Msa0082250 AT5G26000.1 32.258 527 308 11 6 511 16 514 3.87e-84 271
Msa0082250 AT2G44470.2 42.433 337 164 7 30 361 31 342 5.55e-84 266
Msa0082250 AT5G54570.2 36.486 444 218 14 93 508 1 408 6.47e-84 268
Msa0082250 AT2G44470.1 42.433 337 164 7 30 361 31 342 2.17e-83 266
Msa0082250 AT5G25980.3 39.773 352 173 10 17 360 39 359 5.91e-78 253
Msa0082250 AT5G25980.1 39.773 352 173 10 17 360 39 359 5.91e-78 253
Msa0082250 AT3G60130.3 36.818 440 224 14 87 511 40 440 1.02e-77 252
Msa0082250 AT3G60130.2 36.569 443 232 14 87 511 40 451 1.69e-77 251
Msa0082250 AT5G24540.2 43.516 347 160 9 23 361 27 345 2.24e-77 251
Msa0082250 AT1G52400.2 38.874 373 188 10 5 363 8 354 8.91e-77 249
Msa0082250 AT1G61810.5 35.648 432 231 13 97 509 5 408 2.91e-76 247
Msa0082250 AT5G26000.2 36.772 378 203 8 6 376 16 364 1.29e-75 246
Msa0082250 AT1G61810.4 39.706 340 174 9 33 367 38 351 2.32e-74 242
Msa0082250 AT1G61820.3 35.501 369 201 9 164 509 12 366 1.14e-68 226
Msa0082250 AT5G48375.1 31.613 465 217 12 24 473 34 412 4.48e-66 221
Msa0082250 AT2G44450.2 35.876 354 210 7 165 508 3 349 1.11e-64 214
Msa0082250 AT1G61810.2 39.721 287 143 8 33 315 38 298 2.06e-61 204
Msa0082250 AT3G18070.2 35.736 333 185 7 194 509 100 420 3.11e-60 205
Msa0082250 AT3G18070.2 46.269 67 34 1 23 87 25 91 1.64e-11 66.6
Msa0082250 AT5G16580.1 39.297 313 137 10 180 464 12 299 5.25e-56 190
Msa0082250 AT1G51490.1 39.403 335 152 15 36 360 28 321 1.20e-55 192
Msa0082250 AT3G18070.7 34.483 319 180 7 208 509 2 308 3.75e-54 186
Msa0082250 AT2G44480.5 35.331 317 178 10 214 513 1 307 5.20e-52 180
Msa0082250 AT2G44460.2 33.058 363 215 8 165 508 5 358 1.39e-48 174
Msa0082250 AT3G18070.5 38.164 207 114 4 174 380 85 277 2.74e-40 149
Msa0082250 AT3G18070.5 46.269 67 34 1 23 87 25 91 1.01e-11 67.0
Msa0082250 AT3G18070.6 38.150 173 98 3 208 380 2 165 2.71e-34 129

Find 146 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCACACTCTTCTTAAAA+TGG 0.165015 1_2:-61041253 Msa0082250:five_prime_UTR
GCAAGTCATCTTTGGTTTCT+AGG 0.204267 1_2:-61037290 Msa0082250:three_prime_UTR
AAGGGTTCCTATGACTTTAT+TGG 0.240240 1_2:-61039051 Msa0082250:CDS
TGCGCCCGCATTAGCCTTCA+TGG 0.268430 1_2:+61039113 None:intergenic
TGGTATCTACTTCTTCGATT+TGG 0.291417 1_2:-61037444 Msa0082250:three_prime_UTR
TGCTTCTAAACTTGGCTGTT+GGG 0.299049 1_2:-61041134 Msa0082250:CDS
GGTATCTACTTCTTCGATTT+GGG 0.300895 1_2:-61037443 Msa0082250:three_prime_UTR
TCTTTCTCTGTATTTGTTTG+AGG 0.304065 1_2:+61039283 None:intergenic
GATGGATATAAATCGATCTA+TGG 0.305296 1_2:-61037834 Msa0082250:CDS
GGTATCTCAATCTATACATT+TGG 0.307789 1_2:-61039312 Msa0082250:CDS
CATTGATGCATTTGAGTTGT+TGG 0.312270 1_2:-61037856 Msa0082250:CDS
CTAGAGACTTGTTACATTGC+AGG 0.330971 1_2:-61039355 Msa0082250:intron
TTCCAGATGCAAGTCATCTT+TGG 0.343118 1_2:-61037298 Msa0082250:three_prime_UTR
ATGGAAGAACTCCCAGCATT+TGG 0.343859 1_2:-61040928 Msa0082250:CDS
ACTACCTACAGCGAAGATAT+TGG 0.346387 1_2:+61039604 None:intergenic
GTCAGGCACCTCTGCATATC+AGG 0.349767 1_2:-61041055 Msa0082250:intron
CATTAAAGTGTTATTACATA+TGG 0.351795 1_2:-61037627 Msa0082250:three_prime_UTR
GTGCTCTCTATAATGCAAAA+TGG 0.355210 1_2:+61039542 None:intergenic
GTGCCATGCTTGATTCCTTA+AGG 0.355644 1_2:-61038112 Msa0082250:intron
GAATTTGTTAAGATGTCTTC+AGG 0.358288 1_2:+61037185 None:intergenic
TCTTATGTTGTTTCAAAGGT+TGG 0.359688 1_2:-61037164 Msa0082250:three_prime_UTR
TTGCTTCTAAACTTGGCTGT+TGG 0.364143 1_2:-61041135 Msa0082250:CDS
CTTATGTTGTTTCAAAGGTT+GGG 0.365772 1_2:-61037163 Msa0082250:three_prime_UTR
TCGTGAATCCGAACAAGTTA+AGG 0.366298 1_2:-61039070 Msa0082250:CDS
CTCAACATTTGAACCGTACT+TGG 0.368575 1_2:-61039510 Msa0082250:CDS
TTGTAGTACTGCAATCCCTT+CGG 0.373899 1_2:+61040263 None:intergenic
TGTAGTACTGCAATCCCTTC+GGG 0.378058 1_2:+61040264 None:intergenic
TGGTGCTATTGAGCTCAATA+AGG 0.381821 1_2:-61037709 Msa0082250:CDS
AAGACAGAACTGAGAGATTT+CGG 0.382106 1_2:-61038979 Msa0082250:CDS
TGGACATTTACTTCAGTAGT+AGG 0.389081 1_2:-61037667 Msa0082250:exon
ATCAATGAACTCATTAGAAA+TGG 0.390504 1_2:-61040233 Msa0082250:intron
TGGAAAATCTATAGGCTTCA+AGG 0.392213 1_2:+61040453 None:intergenic
GGGTTTGCCCGTGGAGGAAA+TGG 0.393149 1_2:-61040615 Msa0082250:CDS
ACCCAAAGCTATCCGCAAAA+TGG 0.396995 1_2:-61037770 Msa0082250:CDS
CTACCTACAGCGAAGATATT+GGG 0.398761 1_2:+61039605 None:intergenic
GTATCTCAATCTATACATTT+GGG 0.398921 1_2:-61039311 Msa0082250:CDS
CGCATTAGCCTTCATGGAAT+CGG 0.401593 1_2:+61039119 None:intergenic
CCAAGAAATGGAAAATCTAT+AGG 0.402931 1_2:+61040445 None:intergenic
TCTTGTTTACCTTGTATTTG+TGG 0.405045 1_2:+61040571 None:intergenic
TCGCATAGTTCACGCATAGA+TGG 0.406665 1_2:+61037234 None:intergenic
GTGCAGCTCATGCTTGAAAC+AGG 0.412834 1_2:-61040476 Msa0082250:CDS
ATAGGAACCCTTAACTTGTT+CGG 0.417408 1_2:+61039062 None:intergenic
TGGAAGAACTCCCAGCATTT+GGG 0.421902 1_2:-61040927 Msa0082250:CDS
AATTATGCCAATAAAGTCAT+AGG 0.425994 1_2:+61039044 None:intergenic
TCAAGTGAAGTACTCAACTA+TGG 0.426534 1_2:+61037079 None:intergenic
GAAGATATTGGGCTCGTTCA+CGG 0.427993 1_2:+61039616 None:intergenic
TATCAATCTTGACCAAGAAA+TGG 0.432438 1_2:+61040433 None:intergenic
CTGCAATCCCTTCGGGTTGA+CGG 0.436534 1_2:+61040271 None:intergenic
GAAAGTGATACTATAGTTCA+TGG 0.445064 1_2:-61037141 Msa0082250:three_prime_UTR
GTATTTGTGGTACGTGTCGC+AGG 0.445916 1_2:+61040584 None:intergenic
GTAGTCATGACTAACTCTAA+TGG 0.448022 1_2:-61037378 Msa0082250:three_prime_UTR
TGCAATCCCTTCGGGTTGAC+GGG 0.451654 1_2:+61040272 None:intergenic
AACCAAAGATGACTTGCATC+TGG 0.453002 1_2:+61037296 None:intergenic
CGTGAATCCGAACAAGTTAA+GGG 0.454889 1_2:-61039069 Msa0082250:CDS
TGCAAAGGTATCCCAAATGC+TGG 0.456359 1_2:+61040916 None:intergenic
GACGCGGCTGCAAAGGCACT+TGG 0.461462 1_2:-61038952 Msa0082250:CDS
AGTAAAAGACAACACCGAAT+TGG 0.467533 1_2:+61041272 None:intergenic
CATCACTTCATGATGAATCA+AGG 0.468195 1_2:-61038160 Msa0082250:CDS
TGCATACACAGATGAAATAG+TGG 0.472768 1_2:+61037500 None:intergenic
AAATTCTTATGTTGTTTCAA+AGG 0.476031 1_2:-61037168 Msa0082250:three_prime_UTR
TGGGATACCTTTGCACATGC+TGG 0.477610 1_2:-61040908 Msa0082250:intron
CAGAAATGGATCAAATATGA+AGG 0.478384 1_2:-61037898 Msa0082250:CDS
CGGTGCAGACGCGGCTGCAA+AGG 0.480897 1_2:-61038959 Msa0082250:CDS
AAACAAATACAGAGAAAGAC+AGG 0.482898 1_2:-61039279 Msa0082250:CDS
TGTGGTTGGATTCCTACAAA+TGG 0.486025 1_2:+61040098 None:intergenic
GAGGAACAAAATGGATATGT+TGG 0.486410 1_2:-61039333 Msa0082250:CDS
GCTTCTAAACTTGGCTGTTG+GGG 0.486481 1_2:-61041133 Msa0082250:CDS
ATGGAACACATCTATGTTTG+AGG 0.488280 1_2:-61041234 Msa0082250:five_prime_UTR
TTTGGGTATCTTCTCAACTC+TGG 0.491607 1_2:+61037786 None:intergenic
GCAGGTGTAGAGGAAATACT+TGG 0.494686 1_2:-61038707 Msa0082250:intron
TATTTCTTCCCAGATGGTAG+AGG 0.495507 1_2:-61040296 Msa0082250:intron
ACATTGCAGGAGGAACAAAA+TGG 0.499330 1_2:-61039342 Msa0082250:CDS
GCATTAGCCTTCATGGAATC+GGG 0.502125 1_2:+61039120 None:intergenic
ATAAGTCAGAACCACCAATT+CGG 0.504232 1_2:-61041286 Msa0082250:five_prime_UTR
GCAATAAAGAAAAGACAGGT+TGG 0.507374 1_2:+61037344 None:intergenic
GATTCATCACTTGTTTCAGT+TGG 0.507538 1_2:-61037687 Msa0082250:CDS
TTCAAATGTTGAGTTACCCT+TGG 0.507777 1_2:+61039520 None:intergenic
TGTGTAGTGTGACATGTGGT+TGG 0.507789 1_2:+61040084 None:intergenic
GGAAATACTTGGAGAGAATG+AGG 0.507889 1_2:-61038696 Msa0082250:CDS
GTTCTTAGATCAAATGATCC+AGG 0.508146 1_2:-61037019 None:intergenic
TTTGTCGGTTAGCTGGTTCG+TGG 0.531949 1_2:-61037579 Msa0082250:three_prime_UTR
TGAGCTCAATAGCACCAACT+AGG 0.536868 1_2:+61037715 None:intergenic
TACATCTCCATTTCCTCCAC+GGG 0.537555 1_2:+61040608 None:intergenic
GAAGGAGCTGCTGATGAAGA+TGG 0.538137 1_2:-61040947 Msa0082250:CDS
TCTATGTTTGAGGAATATAC+AGG 0.540497 1_2:-61041224 Msa0082250:five_prime_UTR
GAGCTCAATAGCACCAACTA+GGG 0.543925 1_2:+61037716 None:intergenic
GATTGTATAGAAGAACGTAC+AGG 0.547614 1_2:-61039448 Msa0082250:CDS
GAGGAGAACATCGCCTAGGT+GGG 0.550679 1_2:+61039564 None:intergenic
TGATCTCCCACAGGCACTTG+AGG 0.551911 1_2:-61040058 Msa0082250:CDS
AGGATGTGTTAAAATTTGCA+AGG 0.553250 1_2:-61037270 Msa0082250:three_prime_UTR
ATGGATATAAATCGATCTAT+GGG 0.553604 1_2:-61037833 Msa0082250:CDS
GATGCATTTGAGTTGTTGGA+TGG 0.557277 1_2:-61037852 Msa0082250:CDS
TCGGGGATAGAGTCAAGTAT+TGG 0.557281 1_2:-61039643 Msa0082250:CDS
GGTACAAGATCCTCCCTAGT+TGG 0.557600 1_2:-61037729 Msa0082250:CDS
TTCGGATTCACGACTTGAGA+AGG 0.558340 1_2:+61039080 None:intergenic
ATATGATGAACTACCAAGTA+CGG 0.560828 1_2:+61039497 None:intergenic
ATGCGTTGCTTAGTGTCCGT+TGG 0.568364 1_2:+61038180 None:intergenic
GCTGTAGGTAGTTATGATCA+AGG 0.568860 1_2:-61039593 Msa0082250:CDS
AAAAGACAACACCGAATTGG+TGG 0.575887 1_2:+61041275 None:intergenic
GATTCACGACTTGAGAAGGC+AGG 0.580009 1_2:+61039084 None:intergenic
GGGATAGTCTCCGTGCAACA+AGG 0.581800 1_2:+61039140 None:intergenic
TATTCATCCTCAAGTGCCTG+TGG 0.584747 1_2:+61040051 None:intergenic
GCACTTGAGGATGAATATGA+AGG 0.584798 1_2:-61040045 Msa0082250:CDS
GATTCCATGAAGGCTAATGC+GGG 0.585935 1_2:-61039117 Msa0082250:CDS
AAATACTTGCATGGATACAT+TGG 0.589515 1_2:-61038134 Msa0082250:CDS
CGATTCCATGAAGGCTAATG+CGG 0.589908 1_2:-61039118 Msa0082250:CDS
TGTTTGAATTGTTAGGCCAA+CGG 0.590244 1_2:-61038196 Msa0082250:intron
CTACATCTCCATTTCCTCCA+CGG 0.591371 1_2:+61040607 None:intergenic
TGCATTATAGAGAGCACCAA+GGG 0.592510 1_2:-61039536 Msa0082250:CDS
AGAAATGGATCAAATATGAA+GGG 0.593438 1_2:-61037897 Msa0082250:CDS
ACAAGACTCAAACATGTATG+TGG 0.594850 1_2:+61041165 None:intergenic
CGACACGTACCACAAATACA+AGG 0.595864 1_2:-61040580 Msa0082250:intron
ATTATGGAACCCTTGTTGCA+CGG 0.595957 1_2:-61039150 Msa0082250:CDS
ATCACTTCATGATGAATCAA+GGG 0.602506 1_2:-61038159 Msa0082250:CDS
GGAGGAGAACATCGCCTAGG+TGG 0.604005 1_2:+61039563 None:intergenic
TCAAGGGTGAAATACTTGCA+TGG 0.610483 1_2:-61038143 Msa0082250:CDS
ATGGGCTGTACTATGTCGAT+AGG 0.611327 1_2:-61037815 Msa0082250:CDS
GAGCCCAATATCTTCGCTGT+AGG 0.611798 1_2:-61039608 Msa0082250:CDS
AGACTATCCCGATTCCATGA+AGG 0.614373 1_2:-61039127 Msa0082250:CDS
ACTTGGAGAGAATGAGGTAA+CGG 0.621244 1_2:-61038690 Msa0082250:CDS
CTCAATAGCACCAACTAGGG+AGG 0.624860 1_2:+61037719 None:intergenic
GCAAAGGTATCCCAAATGCT+GGG 0.627434 1_2:+61040917 None:intergenic
TAGAGGACCCGTCAACCCGA+AGG 0.628663 1_2:-61040279 Msa0082250:CDS
ATTCATCCTCAAGTGCCTGT+GGG 0.630670 1_2:+61040052 None:intergenic
TTGAGGATGAATATGAAGGA+TGG 0.630697 1_2:-61040041 Msa0082250:CDS
TGAAGGATGGCTTAGTCGTG+AGG 0.633525 1_2:-61040028 Msa0082250:CDS
AGAGGACCCGTCAACCCGAA+GGG 0.637162 1_2:-61040278 Msa0082250:CDS
ATTGTATAGAAGAACGTACA+GGG 0.641550 1_2:-61039447 Msa0082250:intron
GAAGTTCTTTGAGAAATCTG+AGG 0.642090 1_2:-61037400 Msa0082250:three_prime_UTR
GAGACTTGTTACATTGCAGG+AGG 0.645492 1_2:-61039352 Msa0082250:CDS
GAGAGATTTCGGTGCAGACG+CGG 0.645523 1_2:-61038968 Msa0082250:CDS
AAAGAGAACCTGATATGCAG+AGG 0.645981 1_2:+61041047 None:intergenic
ATTCTAACCAGCATGTGCAA+AGG 0.648887 1_2:+61040901 None:intergenic
CTCTCTATAATGCAAAATGG+AGG 0.649451 1_2:+61039545 None:intergenic
ATCAAGGAATCTCCCCACCT+AGG 0.654783 1_2:-61039577 Msa0082250:CDS
AATGGAGGAGAACATCGCCT+AGG 0.656199 1_2:+61039560 None:intergenic
ATATGAAGGGATATTTCATG+TGG 0.659330 1_2:-61037884 Msa0082250:CDS
GAGTGATCTCACATTAACAA+TGG 0.666472 1_2:-61037464 Msa0082250:three_prime_UTR
TACACAATATGATCTCCCAC+AGG 0.670246 1_2:-61040067 Msa0082250:CDS
GGATAGTCTCCGTGCAACAA+GGG 0.671633 1_2:+61039141 None:intergenic
GATTATGATGAATAGGTGGA+AGG 0.677975 1_2:-61040965 Msa0082250:intron
ATACCTTAAGGAATCAAGCA+TGG 0.679375 1_2:+61038109 None:intergenic
AGGAGAACATCGCCTAGGTG+GGG 0.681198 1_2:+61039565 None:intergenic
AACAAATACAGAGAAAGACA+GGG 0.684960 1_2:-61039278 Msa0082250:CDS
ATATTGTGTAGTGTGACATG+TGG 0.703719 1_2:+61040080 None:intergenic
TTGCATTATAGAGAGCACCA+AGG 0.710901 1_2:-61039537 Msa0082250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATTGATGA+TGG - chr1_2:61037136-61037155 Msa0082250:three_prime_UTR 10.0%
!!! ATAATTGATAATAAACTTTT+GGG + chr1_2:61037539-61037558 None:intergenic 10.0%
!!! AATAATTGATAATAAACTTT+TGG + chr1_2:61037540-61037559 None:intergenic 10.0%
!!! ATTTTCAAAAGATAATAAAA+TGG + chr1_2:61040255-61040274 None:intergenic 10.0%
!!! AATCATTTTTCTGAATTATT+TGG - chr1_2:61037501-61037520 Msa0082250:three_prime_UTR 15.0%
!!! TGTTTTTGAAATCTTAATTA+AGG + chr1_2:61038159-61038178 None:intergenic 15.0%
!! AAAAACTTATAATAGAAAAG+TGG - chr1_2:61041005-61041024 Msa0082250:intron 15.0%
!! TAAAATACAATGAAATTGCA+TGG + chr1_2:61037328-61037347 None:intergenic 20.0%
!!! ACTAGCATTTTTATACAAAA+AGG - chr1_2:61037690-61037709 Msa0082250:CDS 20.0%
!!! CTAGCATTTTTATACAAAAA+GGG - chr1_2:61037691-61037710 Msa0082250:CDS 20.0%
!!! GAAATAAAAGCATTTTCAAA+GGG + chr1_2:61038016-61038035 None:intergenic 20.0%
!!! AGAAATAAAAGCATTTTCAA+AGG + chr1_2:61038017-61038036 None:intergenic 20.0%
!! TGTCAAAAAAATGCAATATA+AGG + chr1_2:61038589-61038608 None:intergenic 20.0%
!! CACAGTATGAAAAAAAAAAT+AGG + chr1_2:61038912-61038931 None:intergenic 20.0%
!!! ATTATAACCATTTTTAGAGT+CGG + chr1_2:61039119-61039138 None:intergenic 20.0%
!! AACCTAGTCAAAATATTATT+TGG + chr1_2:61039959-61039978 None:intergenic 20.0%
!!! TTTTTTTTATCCTTCAGAAA+TGG - chr1_2:61040414-61040433 Msa0082250:intron 20.0%
!!! CATTAAAGTGTTATTACATA+TGG - chr1_2:61040699-61040718 Msa0082250:intron 20.0%
!!! AAATTCTTATGTTGTTTCAA+AGG - chr1_2:61041158-61041177 Msa0082250:CDS 20.0%
!! TTTCTTTTTGCTTCTAAACT+TGG - chr1_2:61037184-61037203 Msa0082250:three_prime_UTR 25.0%
! TACTTGTGATTATGATGAAT+AGG - chr1_2:61037354-61037373 Msa0082250:three_prime_UTR 25.0%
!! CATTTTTCTGAATTATTTGG+AGG - chr1_2:61037504-61037523 Msa0082250:three_prime_UTR 25.0%
!! TCTATCTTTCTAATTTTGTC+TGG - chr1_2:61037787-61037806 Msa0082250:CDS 25.0%
!! TATGATTCATCTTTTAATGC+AGG - chr1_2:61037822-61037841 Msa0082250:CDS 25.0%
!! TTTAAGTTCAGTAGAATACT+TGG + chr1_2:61037919-61037938 None:intergenic 25.0%
! ATCAATGAACTCATTAGAAA+TGG - chr1_2:61038093-61038112 Msa0082250:intron 25.0%
! AATTCTTAGTGCATGAAATA+AGG - chr1_2:61038373-61038392 Msa0082250:intron 25.0%
!!! AAAAAGTACTTTTTGTGCTT+AGG - chr1_2:61038554-61038573 Msa0082250:intron 25.0%
! GTATCTCAATCTATACATTT+GGG - chr1_2:61039015-61039034 Msa0082250:CDS 25.0%
!! ACGAATTAGCGATTTTTATT+TGG - chr1_2:61039081-61039100 Msa0082250:CDS 25.0%
!!! CGAATTAGCGATTTTTATTT+GGG - chr1_2:61039082-61039101 Msa0082250:CDS 25.0%
! AATTATGCCAATAAAGTCAT+AGG + chr1_2:61039285-61039304 None:intergenic 25.0%
!! TGTATCACTTGTTGAATAAT+TGG - chr1_2:61039557-61039576 Msa0082250:CDS 25.0%
!!! AATCATTTCTTTGTTTTCTG+TGG - chr1_2:61039592-61039611 Msa0082250:CDS 25.0%
!! TTTTCATGAATGAATATAGG+TGG + chr1_2:61039812-61039831 None:intergenic 25.0%
!! CCATTTTCATGAATGAATAT+AGG + chr1_2:61039815-61039834 None:intergenic 25.0%
! CCTATATTCATTCATGAAAA+TGG - chr1_2:61039812-61039831 Msa0082250:intron 25.0%
!!! AGCCAAATAATATTTTGACT+AGG - chr1_2:61039954-61039973 Msa0082250:intron 25.0%
! ATTATCTATCCTCAATTGTA+TGG - chr1_2:61040002-61040021 Msa0082250:intron 25.0%
! TTTACAATTCCATACAATTG+AGG + chr1_2:61040014-61040033 None:intergenic 25.0%
! TTCCAATTGTTTGAATTGTT+AGG - chr1_2:61040123-61040142 Msa0082250:CDS 25.0%
!!! TATACAAGTTTTGTGTGTTT+AGG + chr1_2:61040332-61040351 None:intergenic 25.0%
! GGATAAAAAAAAACATGAGA+AGG + chr1_2:61040406-61040425 None:intergenic 25.0%
! AGAAATGGATCAAATATGAA+GGG - chr1_2:61040429-61040448 Msa0082250:CDS 25.0%
! ATGGATATAAATCGATCTAT+GGG - chr1_2:61040493-61040512 Msa0082250:intron 25.0%
!! TAACTCTAATGGTTTTTCTT+TGG - chr1_2:61040959-61040978 Msa0082250:intron 25.0%
!! TTTTGCAATAAAGAAAAGAC+AGG + chr1_2:61040989-61041008 None:intergenic 25.0%
TACTCACACTCTTCTTAAAA+TGG - chr1_2:61037073-61037092 Msa0082250:three_prime_UTR 30.0%
TCTATGTTTGAGGAATATAC+AGG - chr1_2:61037102-61037121 Msa0082250:three_prime_UTR 30.0%
TTGTGATTATGATGAATAGG+TGG - chr1_2:61037357-61037376 Msa0082250:three_prime_UTR 30.0%
TCAACTCTCAAATGATAAGA+TGG + chr1_2:61037463-61037482 None:intergenic 30.0%
! TTTTCGCTTCAGAAAAAAGT+TGG + chr1_2:61037574-61037593 None:intergenic 30.0%
AAAATGCTAGTCATGAGAAT+TGG + chr1_2:61037681-61037700 None:intergenic 30.0%
! TCTTGTTTACCTTGTATTTG+TGG + chr1_2:61037758-61037777 None:intergenic 30.0%
CCAAGAAATGGAAAATCTAT+AGG + chr1_2:61037884-61037903 None:intergenic 30.0%
! CCTATAGATTTTCCATTTCT+TGG - chr1_2:61037881-61037900 Msa0082250:CDS 30.0%
TATCAATCTTGACCAAGAAA+TGG + chr1_2:61037896-61037915 None:intergenic 30.0%
! TACAAGTCTTTTCCATTTGT+AGG - chr1_2:61038216-61038235 Msa0082250:intron 30.0%
TTTAAGAACTAACAGCAAAC+TGG + chr1_2:61038354-61038373 None:intergenic 30.0%
TTTCTCTCTCTCTAGATTTA+TGG + chr1_2:61038408-61038427 None:intergenic 30.0%
ATAAATCTAGAGAGAGAGAA+AGG - chr1_2:61038407-61038426 Msa0082250:intron 30.0%
TATTTCACGCATCAATTACT+TGG + chr1_2:61038443-61038462 None:intergenic 30.0%
ATATGATGAACTACCAAGTA+CGG + chr1_2:61038832-61038851 None:intergenic 30.0%
ATTGTATAGAAGAACGTACA+GGG - chr1_2:61038879-61038898 Msa0082250:intron 30.0%
! GTACTTTTCTGTGTTTTCTT+TGG - chr1_2:61038931-61038950 Msa0082250:intron 30.0%
GGTATCTCAATCTATACATT+TGG - chr1_2:61039014-61039033 Msa0082250:CDS 30.0%
TCTTTCTCTGTATTTGTTTG+AGG + chr1_2:61039046-61039065 None:intergenic 30.0%
AAACAAATACAGAGAAAGAC+AGG - chr1_2:61039047-61039066 Msa0082250:CDS 30.0%
AACAAATACAGAGAAAGACA+GGG - chr1_2:61039048-61039067 Msa0082250:CDS 30.0%
CCATAATCCTGCAATAAAAT+AGG + chr1_2:61039163-61039182 None:intergenic 30.0%
! CCTATTTTATTGCAGGATTA+TGG - chr1_2:61039160-61039179 Msa0082250:intron 30.0%
!! CTAAGCTTTAAAATCCACTA+TGG + chr1_2:61039420-61039439 None:intergenic 30.0%
TATTCAACAAGTGATACACA+TGG + chr1_2:61039555-61039574 None:intergenic 30.0%
! ATCACTTGTTGAATAATTGG+TGG - chr1_2:61039560-61039579 Msa0082250:CDS 30.0%
TACTTCACAGTAAAACTATC+TGG - chr1_2:61039710-61039729 Msa0082250:intron 30.0%
! TAAAACTATCTGGTTTGACT+TGG - chr1_2:61039720-61039739 Msa0082250:intron 30.0%
! ATATAGGTGGATTCCATAAA+GGG + chr1_2:61039799-61039818 None:intergenic 30.0%
! AATATAGGTGGATTCCATAA+AGG + chr1_2:61039800-61039819 None:intergenic 30.0%
TGATTGCAATGAATCTCTTT+AGG - chr1_2:61039863-61039882 Msa0082250:intron 30.0%
GACTAGGTTATTGCATATTA+TGG - chr1_2:61039970-61039989 Msa0082250:intron 30.0%
CAAGAGATTTGACAATGATA+TGG - chr1_2:61040043-61040062 Msa0082250:CDS 30.0%
ATAACTACAAGCGTTATGAA+TGG + chr1_2:61040073-61040092 None:intergenic 30.0%
ATCACTTCATGATGAATCAA+GGG - chr1_2:61040167-61040186 Msa0082250:intron 30.0%
AAATACTTGCATGGATACAT+TGG - chr1_2:61040192-61040211 Msa0082250:intron 30.0%
TTAGGACTGTATTCATTTAC+TGG + chr1_2:61040314-61040333 None:intergenic 30.0%
TAAACACCTATGCTTTGATA+TGG - chr1_2:61040369-61040388 Msa0082250:intron 30.0%
CATATTTGATCCATTTCTGA+AGG + chr1_2:61040427-61040446 None:intergenic 30.0%
CAGAAATGGATCAAATATGA+AGG - chr1_2:61040428-61040447 Msa0082250:intron 30.0%
ATATGAAGGGATATTTCATG+TGG - chr1_2:61040442-61040461 Msa0082250:CDS 30.0%
GATGGATATAAATCGATCTA+TGG - chr1_2:61040492-61040511 Msa0082250:intron 30.0%
ATCTTGTACCCTTCAAAAAT+TGG + chr1_2:61040587-61040606 None:intergenic 30.0%
AGGATGTGTTAAAATTTGCA+AGG - chr1_2:61041056-61041075 Msa0082250:CDS 30.0%
!! ATTTTAGAAGATAGCTGCAA+AGG - chr1_2:61041115-61041134 Msa0082250:CDS 30.0%
!! GAATTTGTTAAGATGTCTTC+AGG + chr1_2:61041144-61041163 None:intergenic 30.0%
!! TCTTATGTTGTTTCAAAGGT+TGG - chr1_2:61041162-61041181 Msa0082250:CDS 30.0%
!! CTTATGTTGTTTCAAAGGTT+GGG - chr1_2:61041163-61041182 Msa0082250:CDS 30.0%
GAAAGTGATACTATAGTTCA+TGG - chr1_2:61041185-61041204 Msa0082250:exon 30.0%
ATAAGTCAGAACCACCAATT+CGG - chr1_2:61037040-61037059 Msa0082250:three_prime_UTR 35.0%
AGTAAAAGACAACACCGAAT+TGG + chr1_2:61037057-61037076 None:intergenic 35.0%
ATGGAACACATCTATGTTTG+AGG - chr1_2:61037092-61037111 Msa0082250:three_prime_UTR 35.0%
ACAAGACTCAAACATGTATG+TGG + chr1_2:61037164-61037183 None:intergenic 35.0%
!!! TTCCCTGTTGACTTTGTTTT+TGG - chr1_2:61037248-61037267 Msa0082250:three_prime_UTR 35.0%
!!! TCCCTGTTGACTTTGTTTTT+GGG - chr1_2:61037249-61037268 Msa0082250:three_prime_UTR 35.0%
ACCCAAAAACAAAGTCAACA+GGG + chr1_2:61037253-61037272 None:intergenic 35.0%
TTGCATGGTTACTTCTCTTT+GGG + chr1_2:61037313-61037332 None:intergenic 35.0%
ATTGCATGGTTACTTCTCTT+TGG + chr1_2:61037314-61037333 None:intergenic 35.0%
GATTATGATGAATAGGTGGA+AGG - chr1_2:61037361-61037380 Msa0082250:three_prime_UTR 35.0%
TCATTTGAGAGTTGAGACTA+TGG - chr1_2:61037468-61037487 Msa0082250:three_prime_UTR 35.0%
AGCGAAAAACAATGAGAAAC+TGG - chr1_2:61037586-61037605 Msa0082250:three_prime_UTR 35.0%
GCGAAAAACAATGAGAAACT+GGG - chr1_2:61037587-61037606 Msa0082250:three_prime_UTR 35.0%
TACAAGGTAAACAAGACACA+AGG - chr1_2:61037762-61037781 Msa0082250:CDS 35.0%
TGGAAAATCTATAGGCTTCA+AGG + chr1_2:61037876-61037895 None:intergenic 35.0%
!! TGCTTTTATTTCTTCCCAGA+TGG - chr1_2:61038024-61038043 Msa0082250:intron 35.0%
ATATTGTGTAGTGTGACATG+TGG + chr1_2:61038249-61038268 None:intergenic 35.0%
TTGAGGATGAATATGAAGGA+TGG - chr1_2:61038285-61038304 Msa0082250:intron 35.0%
!! CATCAATTACTTGGTGTCTA+TGG + chr1_2:61038434-61038453 None:intergenic 35.0%
ATTGATCATATGAGCATGTG+AGG + chr1_2:61038493-61038512 None:intergenic 35.0%
TCACATGCTCATATGATCAA+TGG - chr1_2:61038492-61038511 Msa0082250:intron 35.0%
!!! GATGTGTGTTTTAGAGAGTT+CGG - chr1_2:61038664-61038683 Msa0082250:CDS 35.0%
!!! ATGTGTGTTTTAGAGAGTTC+GGG - chr1_2:61038665-61038684 Msa0082250:CDS 35.0%
CTCTCTATAATGCAAAATGG+AGG + chr1_2:61038784-61038803 None:intergenic 35.0%
GTGCTCTCTATAATGCAAAA+TGG + chr1_2:61038787-61038806 None:intergenic 35.0%
TTCAAATGTTGAGTTACCCT+TGG + chr1_2:61038809-61038828 None:intergenic 35.0%
GATTGTATAGAAGAACGTAC+AGG - chr1_2:61038878-61038897 Msa0082250:intron 35.0%
GAGGAACAAAATGGATATGT+TGG - chr1_2:61038993-61039012 Msa0082250:CDS 35.0%
!! TTAGCGATTTTTATTTGGGC+TGG - chr1_2:61039086-61039105 Msa0082250:CDS 35.0%
!! TGAGTTACCGACTCTAAAAA+TGG - chr1_2:61039109-61039128 Msa0082250:CDS 35.0%
! CTTACTGCCTATTTTATTGC+AGG - chr1_2:61039153-61039172 Msa0082250:CDS 35.0%
!! ATAGGAACCCTTAACTTGTT+CGG + chr1_2:61039267-61039286 None:intergenic 35.0%
AAGGGTTCCTATGACTTTAT+TGG - chr1_2:61039275-61039294 Msa0082250:CDS 35.0%
AAGACAGAACTGAGAGATTT+CGG - chr1_2:61039347-61039366 Msa0082250:CDS 35.0%
!!! GTGTTGTGTTTTAACCATAG+TGG - chr1_2:61039403-61039422 Msa0082250:intron 35.0%
! TATCTGATTCCCCTTTTCAT+CGG - chr1_2:61039521-61039540 Msa0082250:CDS 35.0%
!! TTTGTTTTCTGTGGTTTTGC+AGG - chr1_2:61039601-61039620 Msa0082250:CDS 35.0%
TCAACGTAATCTTGAACTAG+AGG + chr1_2:61039846-61039865 None:intergenic 35.0%
! TCTCTTTAGGAAATCGTCAT+TGG - chr1_2:61039876-61039895 Msa0082250:intron 35.0%
TGAGGTTGAATAATGAGTTG+CGG - chr1_2:61039907-61039926 Msa0082250:intron 35.0%
GAGATTTGACAATGATATGG+TGG - chr1_2:61040046-61040065 Msa0082250:CDS 35.0%
GGCCTAACAATTCAAACAAT+TGG + chr1_2:61040128-61040147 None:intergenic 35.0%
TGTTTGAATTGTTAGGCCAA+CGG - chr1_2:61040130-61040149 Msa0082250:CDS 35.0%
CATCACTTCATGATGAATCA+AGG - chr1_2:61040166-61040185 Msa0082250:intron 35.0%
ATACCTTAAGGAATCAAGCA+TGG + chr1_2:61040220-61040239 None:intergenic 35.0%
AGTAGCAATCACATACCTTA+AGG + chr1_2:61040232-61040251 None:intergenic 35.0%
CACATACCATATCAAAGCAT+AGG + chr1_2:61040378-61040397 None:intergenic 35.0%
!! CATTGATGCATTTGAGTTGT+TGG - chr1_2:61040470-61040489 Msa0082250:CDS 35.0%
! AAATTGGCTGTACCATTTTG+CGG + chr1_2:61040571-61040590 None:intergenic 35.0%
! ATGGTACAGCCAATTTTTGA+AGG - chr1_2:61040575-61040594 Msa0082250:intron 35.0%
! TGGTACAGCCAATTTTTGAA+GGG - chr1_2:61040576-61040595 Msa0082250:intron 35.0%
GATTCATCACTTGTTTCAGT+TGG - chr1_2:61040639-61040658 Msa0082250:intron 35.0%
TGGACATTTACTTCAGTAGT+AGG - chr1_2:61040659-61040678 Msa0082250:intron 35.0%
!! GAGAGTCTTTTCAGTTTTGT+CGG - chr1_2:61040732-61040751 Msa0082250:intron 35.0%
TGCATACACAGATGAAATAG+TGG + chr1_2:61040829-61040848 None:intergenic 35.0%
GAGTGATCTCACATTAACAA+TGG - chr1_2:61040862-61040881 Msa0082250:intron 35.0%
TGGTATCTACTTCTTCGATT+TGG - chr1_2:61040882-61040901 Msa0082250:intron 35.0%
GGTATCTACTTCTTCGATTT+GGG - chr1_2:61040883-61040902 Msa0082250:intron 35.0%
! GAAGTTCTTTGAGAAATCTG+AGG - chr1_2:61040926-61040945 Msa0082250:CDS 35.0%
GTAGTCATGACTAACTCTAA+TGG - chr1_2:61040948-61040967 Msa0082250:CDS 35.0%
GCAATAAAGAAAAGACAGGT+TGG + chr1_2:61040985-61041004 None:intergenic 35.0%
! TCAAGTGAAGTACTCAACTA+TGG + chr1_2:61041250-61041269 None:intergenic 35.0%
AAAAGACAACACCGAATTGG+TGG + chr1_2:61037054-61037073 None:intergenic 40.0%
TTGCTTCTAAACTTGGCTGT+TGG - chr1_2:61037191-61037210 Msa0082250:three_prime_UTR 40.0%
TGCTTCTAAACTTGGCTGTT+GGG - chr1_2:61037192-61037211 Msa0082250:three_prime_UTR 40.0%
GACCCAAAAACAAAGTCAAC+AGG + chr1_2:61037254-61037273 None:intergenic 40.0%
!!! GTTGACTTTGTTTTTGGGTC+AGG - chr1_2:61037254-61037273 Msa0082250:three_prime_UTR 40.0%
AAAGAGAACCTGATATGCAG+AGG + chr1_2:61037282-61037301 None:intergenic 40.0%
TGCATGGTTACTTCTCTTTG+GGG + chr1_2:61037312-61037331 None:intergenic 40.0%
ATTCTAACCAGCATGTGCAA+AGG + chr1_2:61037428-61037447 None:intergenic 40.0%
TATTTCTTCCCAGATGGTAG+AGG - chr1_2:61038030-61038049 Msa0082250:intron 40.0%
TTGTAGTACTGCAATCCCTT+CGG + chr1_2:61038066-61038085 None:intergenic 40.0%
TGTGGTTGGATTCCTACAAA+TGG + chr1_2:61038231-61038250 None:intergenic 40.0%
TACACAATATGATCTCCCAC+AGG - chr1_2:61038259-61038278 Msa0082250:intron 40.0%
GCACTTGAGGATGAATATGA+AGG - chr1_2:61038281-61038300 Msa0082250:intron 40.0%
!!! TGTGTGTTTTAGAGAGTTCG+GGG - chr1_2:61038666-61038685 Msa0082250:CDS 40.0%
CTACCTACAGCGAAGATATT+GGG + chr1_2:61038724-61038743 None:intergenic 40.0%
ACTACCTACAGCGAAGATAT+TGG + chr1_2:61038725-61038744 None:intergenic 40.0%
GCTGTAGGTAGTTATGATCA+AGG - chr1_2:61038733-61038752 Msa0082250:intron 40.0%
!! TTGCATTATAGAGAGCACCA+AGG - chr1_2:61038789-61038808 Msa0082250:intron 40.0%
!! TGCATTATAGAGAGCACCAA+GGG - chr1_2:61038790-61038809 Msa0082250:intron 40.0%
CTCAACATTTGAACCGTACT+TGG - chr1_2:61038816-61038835 Msa0082250:intron 40.0%
!! CTAGAGACTTGTTACATTGC+AGG - chr1_2:61038971-61038990 Msa0082250:CDS 40.0%
ACATTGCAGGAGGAACAAAA+TGG - chr1_2:61038984-61039003 Msa0082250:CDS 40.0%
ATTATGGAACCCTTGTTGCA+CGG - chr1_2:61039176-61039195 Msa0082250:intron 40.0%
TCGTGAATCCGAACAAGTTA+AGG - chr1_2:61039256-61039275 Msa0082250:CDS 40.0%
CGTGAATCCGAACAAGTTAA+GGG - chr1_2:61039257-61039276 Msa0082250:CDS 40.0%
GTGTTTACACCGATGAAAAG+GGG + chr1_2:61039533-61039552 None:intergenic 40.0%
GGTGTTTACACCGATGAAAA+GGG + chr1_2:61039534-61039553 None:intergenic 40.0%
TGGTGTTTACACCGATGAAA+AGG + chr1_2:61039535-61039554 None:intergenic 40.0%
GGAAATACTTGGAGAGAATG+AGG - chr1_2:61039630-61039649 Msa0082250:CDS 40.0%
ACTTGGAGAGAATGAGGTAA+CGG - chr1_2:61039636-61039655 Msa0082250:CDS 40.0%
GGAACATTCAAGACCCTTTA+TGG - chr1_2:61039783-61039802 Msa0082250:intron 40.0%
TCAAGGGTGAAATACTTGCA+TGG - chr1_2:61040183-61040202 Msa0082250:intron 40.0%
!! GATGCATTTGAGTTGTTGGA+TGG - chr1_2:61040474-61040493 Msa0082250:CDS 40.0%
TTTGGGTATCTTCTCAACTC+TGG + chr1_2:61040543-61040562 None:intergenic 40.0%
! ACCATTTTGCGGATAGCTTT+GGG + chr1_2:61040560-61040579 None:intergenic 40.0%
! TACCATTTTGCGGATAGCTT+TGG + chr1_2:61040561-61040580 None:intergenic 40.0%
!! TGGTGCTATTGAGCTCAATA+AGG - chr1_2:61040617-61040636 Msa0082250:CDS 40.0%
!! TTTCAGTTTTGTCGGTTAGC+TGG - chr1_2:61040740-61040759 Msa0082250:intron 40.0%
TTCCAGATGCAAGTCATCTT+TGG - chr1_2:61041028-61041047 Msa0082250:intron 40.0%
! AACCAAAGATGACTTGCATC+TGG + chr1_2:61041033-61041052 None:intergenic 40.0%
! GCAAGTCATCTTTGGTTTCT+AGG - chr1_2:61041036-61041055 Msa0082250:intron 40.0%
GCTTCTAAACTTGGCTGTTG+GGG - chr1_2:61037193-61037212 Msa0082250:three_prime_UTR 45.0%
ATGGAAGAACTCCCAGCATT+TGG - chr1_2:61037398-61037417 Msa0082250:three_prime_UTR 45.0%
TGGAAGAACTCCCAGCATTT+GGG - chr1_2:61037399-61037418 Msa0082250:three_prime_UTR 45.0%
!! GCAAAGGTATCCCAAATGCT+GGG + chr1_2:61037412-61037431 None:intergenic 45.0%
!! TGCAAAGGTATCCCAAATGC+TGG + chr1_2:61037413-61037432 None:intergenic 45.0%
ATACAAAAAGGGTTTGCCCG+TGG - chr1_2:61037702-61037721 Msa0082250:CDS 45.0%
TACATCTCCATTTCCTCCAC+GGG + chr1_2:61037721-61037740 None:intergenic 45.0%
CTACATCTCCATTTCCTCCA+CGG + chr1_2:61037722-61037741 None:intergenic 45.0%
CGACACGTACCACAAATACA+AGG - chr1_2:61037746-61037765 Msa0082250:CDS 45.0%
TGTAGTACTGCAATCCCTTC+GGG + chr1_2:61038065-61038084 None:intergenic 45.0%
TGTGTAGTGTGACATGTGGT+TGG + chr1_2:61038245-61038264 None:intergenic 45.0%
ATTCATCCTCAAGTGCCTGT+GGG + chr1_2:61038277-61038296 None:intergenic 45.0%
TATTCATCCTCAAGTGCCTG+TGG + chr1_2:61038278-61038297 None:intergenic 45.0%
TCGGGGATAGAGTCAAGTAT+TGG - chr1_2:61038683-61038702 Msa0082250:CDS 45.0%
GAAGATATTGGGCTCGTTCA+CGG + chr1_2:61038713-61038732 None:intergenic 45.0%
!! GAGACTTGTTACATTGCAGG+AGG - chr1_2:61038974-61038993 Msa0082250:CDS 45.0%
AGACTATCCCGATTCCATGA+AGG - chr1_2:61039199-61039218 Msa0082250:intron 45.0%
!! GCATTAGCCTTCATGGAATC+GGG + chr1_2:61039209-61039228 None:intergenic 45.0%
!! CGCATTAGCCTTCATGGAAT+CGG + chr1_2:61039210-61039229 None:intergenic 45.0%
CGATTCCATGAAGGCTAATG+CGG - chr1_2:61039208-61039227 Msa0082250:intron 45.0%
GATTCCATGAAGGCTAATGC+GGG - chr1_2:61039209-61039228 Msa0082250:intron 45.0%
TTCGGATTCACGACTTGAGA+AGG + chr1_2:61039249-61039268 None:intergenic 45.0%
GCAGGTGTAGAGGAAATACT+TGG - chr1_2:61039619-61039638 Msa0082250:CDS 45.0%
TCAGTACCCATTCACACCAT+GGG - chr1_2:61039744-61039763 Msa0082250:intron 45.0%
CTAAAGCCCATGGTGTGAAT+GGG + chr1_2:61039753-61039772 None:intergenic 45.0%
! TCGTCATTGGATGCTGATTG+AGG - chr1_2:61039889-61039908 Msa0082250:intron 45.0%
AATAATGAGTTGCGGCGCTA+AGG - chr1_2:61039915-61039934 Msa0082250:intron 45.0%
GTGCCATGCTTGATTCCTTA+AGG - chr1_2:61040214-61040233 Msa0082250:intron 45.0%
! ATGGGCTGTACTATGTCGAT+AGG - chr1_2:61040511-61040530 Msa0082250:intron 45.0%
ACCCAAAGCTATCCGCAAAA+TGG - chr1_2:61040556-61040575 Msa0082250:intron 45.0%
GAGCTCAATAGCACCAACTA+GGG + chr1_2:61040613-61040632 None:intergenic 45.0%
TGAGCTCAATAGCACCAACT+AGG + chr1_2:61040614-61040633 None:intergenic 45.0%
TCGCATAGTTCACGCATAGA+TGG + chr1_2:61041095-61041114 None:intergenic 45.0%
GAAGGAGCTGCTGATGAAGA+TGG - chr1_2:61037379-61037398 Msa0082250:three_prime_UTR 50.0%
TGGGATACCTTTGCACATGC+TGG - chr1_2:61037418-61037437 Msa0082250:three_prime_UTR 50.0%
GTATTTGTGGTACGTGTCGC+AGG + chr1_2:61037745-61037764 None:intergenic 50.0%
GTGCAGCTCATGCTTGAAAC+AGG - chr1_2:61037850-61037869 Msa0082250:CDS 50.0%
TGAAGGATGGCTTAGTCGTG+AGG - chr1_2:61038298-61038317 Msa0082250:intron 50.0%
CAGCAAACTGGTGCAGCTAT+AGG + chr1_2:61038342-61038361 None:intergenic 50.0%
GAGCCCAATATCTTCGCTGT+AGG - chr1_2:61038718-61038737 Msa0082250:intron 50.0%
ATCAAGGAATCTCCCCACCT+AGG - chr1_2:61038749-61038768 Msa0082250:intron 50.0%
AATGGAGGAGAACATCGCCT+AGG + chr1_2:61038769-61038788 None:intergenic 50.0%
GGATAGTCTCCGTGCAACAA+GGG + chr1_2:61039188-61039207 None:intergenic 50.0%
GATTCACGACTTGAGAAGGC+AGG + chr1_2:61039245-61039264 None:intergenic 50.0%
!! CTGTGGTTTTGCAGGTGTAG+AGG - chr1_2:61039609-61039628 Msa0082250:CDS 50.0%
CTCAGTACCCATTCACACCA+TGG - chr1_2:61039743-61039762 Msa0082250:intron 50.0%
CCTAAAGCCCATGGTGTGAA+TGG + chr1_2:61039754-61039773 None:intergenic 50.0%
CCATTCACACCATGGGCTTT+AGG - chr1_2:61039751-61039770 Msa0082250:intron 50.0%
AGCACTTGTCCTAAAGCCCA+TGG + chr1_2:61039763-61039782 None:intergenic 50.0%
!! ATGGGCTTTAGGACAAGTGC+TGG - chr1_2:61039762-61039781 Msa0082250:intron 50.0%
ATGCGTTGCTTAGTGTCCGT+TGG + chr1_2:61040149-61040168 None:intergenic 50.0%
GGTACAAGATCCTCCCTAGT+TGG - chr1_2:61040597-61040616 Msa0082250:CDS 50.0%
CTCAATAGCACCAACTAGGG+AGG + chr1_2:61040610-61040629 None:intergenic 50.0%
!! TTTGTCGGTTAGCTGGTTCG+TGG - chr1_2:61040747-61040766 Msa0082250:intron 50.0%
GTCAGGCACCTCTGCATATC+AGG - chr1_2:61037271-61037290 Msa0082250:three_prime_UTR 55.0%
CAAAAAGGGTTTGCCCGTGG+AGG - chr1_2:61037705-61037724 Msa0082250:CDS 55.0%
! TGACGGGTCCTCTACCATCT+GGG + chr1_2:61038041-61038060 None:intergenic 55.0%
! TTGACGGGTCCTCTACCATC+TGG + chr1_2:61038042-61038061 None:intergenic 55.0%
!! TGCAATCCCTTCGGGTTGAC+GGG + chr1_2:61038057-61038076 None:intergenic 55.0%
!! CTGCAATCCCTTCGGGTTGA+CGG + chr1_2:61038058-61038077 None:intergenic 55.0%
TGATCTCCCACAGGCACTTG+AGG - chr1_2:61038268-61038287 Msa0082250:intron 55.0%
AGGAGAACATCGCCTAGGTG+GGG + chr1_2:61038764-61038783 None:intergenic 55.0%
GAGGAGAACATCGCCTAGGT+GGG + chr1_2:61038765-61038784 None:intergenic 55.0%
GGGATAGTCTCCGTGCAACA+AGG + chr1_2:61039189-61039208 None:intergenic 55.0%
! GAGAGATTTCGGTGCAGACG+CGG - chr1_2:61039358-61039377 Msa0082250:intron 55.0%
GGGTTTGCCCGTGGAGGAAA+TGG - chr1_2:61037711-61037730 Msa0082250:CDS 60.0%
TAGAGGACCCGTCAACCCGA+AGG - chr1_2:61038047-61038066 Msa0082250:intron 60.0%
AGAGGACCCGTCAACCCGAA+GGG - chr1_2:61038048-61038067 Msa0082250:intron 60.0%
GGAGGAGAACATCGCCTAGG+TGG + chr1_2:61038766-61038785 None:intergenic 60.0%
!! TGCGCCCGCATTAGCCTTCA+TGG + chr1_2:61039216-61039235 None:intergenic 60.0%
!! GACGCGGCTGCAAAGGCACT+TGG - chr1_2:61039374-61039393 Msa0082250:intron 65.0%
CGGTGCAGACGCGGCTGCAA+AGG - chr1_2:61039367-61039386 Msa0082250:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 61037022 61041326 61037022 ID=Msa0082250;Name=Msa0082250
chr1_2 mRNA 61037022 61041326 61037022 ID=Msa0082250-mRNA-1;Parent=Msa0082250;Name=Msa0082250-mRNA-1;_AED=0.16;_eAED=0.17;_QI=130|0.63|0.66|1|0.63|0.58|12|649|535
chr1_2 exon 61037022 61037917 61037022 ID=Msa0082250-mRNA-1:exon:20061;Parent=Msa0082250-mRNA-1
chr1_2 exon 61038113 61038203 61038113 ID=Msa0082250-mRNA-1:exon:20060;Parent=Msa0082250-mRNA-1
chr1_2 exon 61038630 61038725 61038630 ID=Msa0082250-mRNA-1:exon:20059;Parent=Msa0082250-mRNA-1
chr1_2 exon 61038944 61039173 61038944 ID=Msa0082250-mRNA-1:exon:20058;Parent=Msa0082250-mRNA-1
chr1_2 exon 61039241 61039371 61039241 ID=Msa0082250-mRNA-1:exon:20057;Parent=Msa0082250-mRNA-1
chr1_2 exon 61039448 61039706 61039448 ID=Msa0082250-mRNA-1:exon:20056;Parent=Msa0082250-mRNA-1
chr1_2 exon 61040024 61040168 61040024 ID=Msa0082250-mRNA-1:exon:20055;Parent=Msa0082250-mRNA-1
chr1_2 exon 61040234 61040305 61040234 ID=Msa0082250-mRNA-1:exon:20054;Parent=Msa0082250-mRNA-1
chr1_2 exon 61040429 61040504 61040429 ID=Msa0082250-mRNA-1:exon:20053;Parent=Msa0082250-mRNA-1
chr1_2 exon 61040581 61040636 61040581 ID=Msa0082250-mRNA-1:exon:20052;Parent=Msa0082250-mRNA-1
chr1_2 exon 61040909 61040972 61040909 ID=Msa0082250-mRNA-1:exon:20051;Parent=Msa0082250-mRNA-1
chr1_2 exon 61041056 61041326 61041056 ID=Msa0082250-mRNA-1:exon:20050;Parent=Msa0082250-mRNA-1
chr1_2 five_prime_UTR 61041197 61041326 61041197 ID=Msa0082250-mRNA-1:five_prime_utr;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61041056 61041196 61041056 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61040909 61040972 61040909 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61040581 61040636 61040581 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61040429 61040504 61040429 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61040234 61040305 61040234 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61040024 61040168 61040024 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61039448 61039706 61039448 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61039241 61039371 61039241 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61038944 61039173 61038944 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61038630 61038725 61038630 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61038113 61038203 61038113 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 CDS 61037671 61037917 61037671 ID=Msa0082250-mRNA-1:cds;Parent=Msa0082250-mRNA-1
chr1_2 three_prime_UTR 61037022 61037670 61037022 ID=Msa0082250-mRNA-1:three_prime_utr;Parent=Msa0082250-mRNA-1
Gene Sequence

>Msa0082250

ATGATGGAACCACATACATGTTTGAGTCTTGTTTTCTTTTTGCTTCTAAACTTGGCTGTTGGGGTGTTAAGTACTGATGATTATAGCAGACATGATTTCCCTGTTGACTTTGTTTTTGGGTCAGGCACCTCTGCATATCAGGTGGAAGGAGCTGCTGATGAAGATGGAAGAACTCCCAGCATTTGGGATACCTTTGCACATGCTGGGTTTGCCCGTGGAGGAAATGGAGATGTAGCCTGCGACACGTACCACAAATACAAGGAAGATGTGCAGCTCATGCTTGAAACAGGCCTTGAAGCCTATAGATTTTCCATTTCTTGGTCAAGATTGATACCAAATGGTAGAGGACCCGTCAACCCGAAGGGATTGCAGTACTACAACAATCTTATCAATGAACTCATTAGAAATGTAAGTGAAATCAATTATGTCTCTTCAAGTGATATAATACAAGTCTTTTCCATTTGTAGGAATCCAACCACATGTCACACTACACAATATGATCTCCCACAGGCACTTGAGGATGAATATGAAGGATGGCTTAGTCGTGAGGTCATAAAAGACTTCACAAACTATGCAGATGTGTGTTTTAGAGAGTTCGGGGATAGAGTCAAGTATTGGACTACCGTGAACGAGCCCAATATCTTCGCTGTAGGTAGTTATGATCAAGGAATCTCCCCACCTAGGCGATGTTCTCCTCCATTTTGCATTATAGAGAGCACCAAGGGTAACTCAACATTTGAACCGTACTTGGTAGTTCATCATATTTTGCTAGCGCATTCTTCAGCTGTGAGATTGTATAGAAGAACGTACAGGACTTGTTACATTGCAGGAGGAACAAAATGGATATGTTGGTATCTCAATCTATACATTTGGGTAGTTCCTCAAACAAATACAGAGAAAGACAGGGCTGCATGTCAACGAATTAGCGATTTTTATTTGGGCTGGATTATGGAACCCTTGTTGCACGGAGACTATCCCGATTCCATGAAGGCTAATGCGGGCGCAAGAATTCCTGCCTTCTCAAGTCGTGAATCCGAACAAGTTAAGGGTTCCTATGACTTTATTGGCATAATTCACTACAGCAAATTAAATATCACAGACAATTCTGATGTGCTGAAGACAGAACTGAGAGATTTCGGTGCAGACGCGGCTGCAAAGGCACTTGGTATTGTGTGTGTAGAGGAAATACTTGGAGAGAATGAGGTAACGGTTAAAAAACTAATTAAAATTATCATCTTAATTGATTTGTTCAATCACAGATTACTTCACAGCCAACGGACACTAAGCAACGCATCACTTCATGATGAATCAAGGGTGAAATACTTGCATGGATACATTGGTGCCATGCTTGATTCCTTAAGAAATGGATCAAATATGAAGGGATATTTCATGTGGTCTTTCATTGATGCATTTGAGTTGTTGGATGGATATAAATCGATCTATGGGCTGTACTATGTCGATAGGAATGATCCAGAGTTGAGAAGATACCCAAAGCTATCCGCAAAATGGTACAGCCAATTTTTGAAGGGTACAAGATCCTCCCTAGTTGGTGCTATTGAGCTCAATAAGGATTCATCACTTGTTTCAGTTGGACATTTACTTCAGTAG
Protein sequence

>Msa0082250

MMEPHTCLSLVFFLLLNLAVGVLSTDDYSRHDFPVDFVFGSGTSAYQVEGAADEDGRTPSIWDTFAHAGFARGGNGDVACDTYHKYKEDVQLMLETGLEAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELIRNVSEINYVSSSDIIQVFSICRNPTTCHTTQYDLPQALEDEYEGWLSREVIKDFTNYADVCFREFGDRVKYWTTVNEPNIFAVGSYDQGISPPRRCSPPFCIIESTKGNSTFEPYLVVHHILLAHSSAVRLYRRTYRTCYIAGGTKWICWYLNLYIWVVPQTNTEKDRAACQRISDFYLGWIMEPLLHGDYPDSMKANAGARIPAFSSRESEQVKGSYDFIGIIHYSKLNITDNSDVLKTELRDFGADAAAKALGIVCVEEILGENEVTVKKLIKIIILIDLFNHRLLHSQRTLSNASLHDESRVKYLHGYIGAMLDSLRNGSNMKGYFMWSFIDAFELLDGYKSIYGLYYVDRNDPELRRYPKLSAKWYSQFLKGTRSSLVGAIELNKDSSLVSVGHLLQ*