AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0675250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0675250 MtrunA17_Chr4g0018641 95.870 678 28 0 1 678 1 678 0.0 1327
Msa0675250 MtrunA17_Chr8g0372991 33.103 290 177 8 404 680 84 369 5.73e-39 148
Msa0675250 MtrunA17_Chr5g0423381 29.641 334 205 10 362 675 16 339 5.39e-33 130
Msa0675250 MtrunA17_Chr1g0188361 30.820 305 177 10 398 673 88 387 1.65e-24 106
Msa0675250 MtrunA17_Chr1g0195451 30.928 194 120 4 38 218 119 311 1.10e-17 86.3
Msa0675250 MtrunA17_Chr3g0138841 25.634 355 164 11 38 358 97 385 2.03e-16 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0675250 AT4G25290.1 53.676 680 304 5 3 679 2 673 0.0 758
Msa0675250 AT4G36530.1 32.753 287 168 8 404 673 27 305 2.00e-35 137
Msa0675250 AT4G36530.2 32.753 287 168 8 404 673 84 362 7.06e-35 137
Msa0675250 AT5G19850.1 32.414 290 175 8 401 675 75 358 4.06e-32 128
Msa0675250 AT5G38520.1 28.664 307 185 11 399 678 62 361 1.16e-22 100
Msa0675250 AT5G38520.2 27.900 319 184 11 399 678 62 373 1.92e-21 97.4
Msa0675250 AT5G13800.3 26.994 326 180 11 411 686 127 444 4.13e-20 94.7
Msa0675250 AT5G13800.2 26.911 327 179 12 411 686 104 421 4.18e-20 94.7
Msa0675250 AT5G13800.1 26.911 327 179 12 411 686 104 421 4.18e-20 94.7
Msa0675250 AT5G24850.1 25.568 352 169 11 29 358 79 359 4.64e-16 82.4
Msa0675250 AT5G13800.4 26.733 303 167 10 411 663 104 401 6.01e-16 80.9
Msa0675250 AT2G47590.1 28.866 194 116 5 42 218 120 308 1.07e-15 80.5

Find 194 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATCATTTATTGCACTATT+TGG 0.145894 4_4:+23785922 Msa0675250:CDS
TGATGATATGATGGGATTTA+TGG 0.148142 4_4:+23785167 Msa0675250:CDS
CTTTACAGTTTGTTGATAAA+TGG 0.192600 4_4:+23788508 Msa0675250:three_prime_UTR
GGCTGCATATTTGAGGTATT+TGG 0.200869 4_4:+23785404 Msa0675250:CDS
AGCTCAGTATATACAATATT+TGG 0.206734 4_4:-23786751 None:intergenic
ATTTGGTCCTGCGCTGTCTT+TGG 0.222263 4_4:+23785939 Msa0675250:CDS
GTTTGGGCTATTACATTGTT+AGG 0.229050 4_4:+23786709 Msa0675250:CDS
CGGTGATCGAATACATAAAT+TGG 0.258554 4_4:-23783464 None:intergenic
GTTCTTCTTGTACATGGTTT+TGG 0.264043 4_4:+23786628 Msa0675250:CDS
TGGAACTAGGGATTGAAAAT+TGG 0.264946 4_4:-23783444 None:intergenic
TGGCTAGTGGTACTGGCTTT+TGG 0.265022 4_4:+23786247 Msa0675250:intron
TTGTGATGGTGTTATAATTA+AGG 0.274721 4_4:+23788177 Msa0675250:CDS
TCTGTGTTTGTTACACAAAA+AGG 0.298646 4_4:+23785339 Msa0675250:CDS
GCGGGAAAGTGAGGGAAAAT+TGG 0.306215 4_4:-23783300 None:intergenic
CTAGAGCTGGAAATCGAGTT+TGG 0.313646 4_4:+23786692 Msa0675250:CDS
AAGATATGGGTACAAATGTT+TGG 0.319140 4_4:-23783219 None:intergenic
TCTAATCTCATGATTAAGTT+TGG 0.324364 4_4:+23783643 Msa0675250:CDS
GTGGCATTGGAGTCAGAAAT+TGG 0.327611 4_4:-23788133 None:intergenic
AGGATAGTATTCACTGATTC+TGG 0.333253 4_4:-23788338 None:intergenic
GGTGGAAAGAAGCGGTTGTT+AGG 0.339576 4_4:-23783326 None:intergenic
CCTGCTGTTCTTCTTGTACA+TGG 0.339681 4_4:+23786622 Msa0675250:CDS
GAGGGAGTAACACGAAGATA+TGG 0.340476 4_4:-23783233 None:intergenic
TTTGGTCCTGCGCTGTCTTT+GGG 0.340755 4_4:+23785940 Msa0675250:CDS
TAAAGCTAAAGATGCTTTCC+AGG 0.341211 4_4:-23787918 None:intergenic
CACCTTGTTGGCAACTCAAT+TGG 0.341981 4_4:+23786829 Msa0675250:CDS
CACACAGGTGCTGCAAAATC+TGG 0.345524 4_4:+23784904 Msa0675250:intron
TTCAGAAATGGAACTAGATT+GGG 0.354787 4_4:+23785000 Msa0675250:CDS
TCCTGGTGTGCCTGTGGTCC+TGG 0.356320 4_4:+23787900 Msa0675250:CDS
AACATTACCTGGTTCAGAAA+TGG 0.360175 4_4:+23784988 Msa0675250:CDS
GCTATTACATTGTTAGGGTT+TGG 0.368642 4_4:+23786715 Msa0675250:CDS
TGCTGAAATCTAGTGAGAAC+AGG 0.371964 4_4:+23785268 Msa0675250:CDS
AGATATGGGTACAAATGTTT+GGG 0.376748 4_4:-23783218 None:intergenic
ATATATCTGTATTCATTCAT+AGG 0.378283 4_4:+23789392 Msa0675250:three_prime_UTR
TGAAAACAGGACATGGTACC+TGG 0.383931 4_4:+23788556 Msa0675250:three_prime_UTR
TTGCTATTGTTGCTCGAGTT+TGG 0.384643 4_4:+23787019 Msa0675250:CDS
GCAGGGTTCTTATCTCCCTT+TGG 0.386221 4_4:+23786021 Msa0675250:CDS
GACAAACGTCAGTGACTTCA+TGG 0.391121 4_4:+23787564 Msa0675250:CDS
TTCTGATGAAATGCTGGAAC+TGG 0.395021 4_4:+23783573 Msa0675250:CDS
TGAATACTATCCTTTGTGAT+TGG 0.400538 4_4:+23788348 Msa0675250:CDS
CAAATGTTTGGGTTTGGTAA+AGG 0.401865 4_4:-23783207 None:intergenic
GTTCAGAAATGGAACTAGAT+TGG 0.402765 4_4:+23784999 Msa0675250:CDS
CTGATTCTGGCACTTCATCA+TGG 0.403175 4_4:-23788325 None:intergenic
TGGGTACAAATGTTTGGGTT+TGG 0.404817 4_4:-23783213 None:intergenic
GACTTTATTGTTGATGTTGT+GGG 0.414569 4_4:+23786796 Msa0675250:CDS
CCCATCATATCATCATAAAC+AGG 0.415380 4_4:-23785159 None:intergenic
GCACTCCAAGGATTGAAGTA+TGG 0.416766 4_4:+23784473 Msa0675250:CDS
AAATGTTTGGGTTTGGTAAA+GGG 0.420333 4_4:-23783206 None:intergenic
TGATAATGGTAGAGATTTGA+TGG 0.424174 4_4:+23789293 Msa0675250:intron
TAATCATTATGTACAGTTGC+CGG 0.425230 4_4:-23788428 None:intergenic
CGAATACATAAATTGGAACT+AGG 0.426978 4_4:-23783457 None:intergenic
TCCTGTTTATGATGATATGA+TGG 0.429749 4_4:+23785158 Msa0675250:CDS
TGGAGTGCCTTGTGTAGCCT+TGG 0.436757 4_4:-23784458 None:intergenic
TGTTCGCTGTTCAAGATTTG+AGG 0.440399 4_4:+23783599 Msa0675250:CDS
TTCTTTCCACCTCGCCGTCT+CGG 0.440640 4_4:+23783338 Msa0675250:CDS
CATATCAAGTCTTATGATCC+TGG 0.441605 4_4:+23787883 Msa0675250:intron
GGAAAAGATTCTAATTATAC+AGG 0.443244 4_4:+23787981 Msa0675250:CDS
GGGGAACCGGTCCACCTTGT+TGG 0.443402 4_4:+23786817 Msa0675250:CDS
GTAACAAACACAGATTCATT+TGG 0.444156 4_4:-23785330 None:intergenic
ATGCATTGGCTGCATATTTG+AGG 0.450155 4_4:+23785397 Msa0675250:CDS
TCCTCAATTAAACTGAAAAC+AGG 0.451706 4_4:+23788543 Msa0675250:three_prime_UTR
CAACTGACACCGCCATTGTA+TGG 0.452717 4_4:+23783369 Msa0675250:CDS
CTTCAGCTTTCAACATTACC+TGG 0.455179 4_4:+23784977 Msa0675250:CDS
AGGGAACGGCTCGTGATGAT+TGG 0.459477 4_4:+23785427 Msa0675250:CDS
AAGCATAGCCACTGTGGCAT+TGG 0.460190 4_4:-23788146 None:intergenic
CTCAACTGCTGCTGCAATGG+TGG 0.464086 4_4:-23786055 None:intergenic
TATATATATTCATTTGGTAA+AGG 0.464346 4_4:-23789600 None:intergenic
AGACTTTATTGTTGATGTTG+TGG 0.466885 4_4:+23786795 Msa0675250:CDS
GAAGCTGCAGTGAGGAGTCC+AGG 0.469715 4_4:-23783422 None:intergenic
TAGAGCTGGAAATCGAGTTT+GGG 0.469953 4_4:+23786693 Msa0675250:CDS
TATACAATTGCCGGTGAAGA+TGG 0.471229 4_4:+23786598 Msa0675250:CDS
AAATATACCTAAAATGATAG+TGG 0.471514 4_4:-23789350 None:intergenic
GTTAGGGAAGCGGGAAAGTG+AGG 0.474853 4_4:-23783309 None:intergenic
CGTGCTTCAGAAAGTCGAAA+TGG 0.475834 4_4:+23785898 Msa0675250:CDS
CCGTGACAACATACACGGTT+TGG 0.476794 4_4:+23786669 Msa0675250:CDS
TACATAATGATTATAACAGC+AGG 0.478235 4_4:+23788438 Msa0675250:three_prime_UTR
AGATCGAAAGGGCAGATGAT+TGG 0.478592 4_4:+23787744 Msa0675250:CDS
AAGAAGATAGTTAAGAGGTA+TGG 0.479952 4_4:-23787947 None:intergenic
TTTGGGCTATTACATTGTTA+GGG 0.480583 4_4:+23786710 Msa0675250:CDS
TTGTATATACTGAGCTCTTG+TGG 0.481245 4_4:+23786758 Msa0675250:CDS
TGTATATACTGAGCTCTTGT+GGG 0.481366 4_4:+23786759 Msa0675250:CDS
TGATTCTGGCACTTCATCAT+GGG 0.483873 4_4:-23788324 None:intergenic
ATAATTAAGGAATTAGATGC+TGG 0.485194 4_4:+23788190 Msa0675250:CDS
CAAAGCTACTTGTGTATTTG+CGG 0.486980 4_4:+23784372 Msa0675250:CDS
GTCCAGGGTGATCGTCTGTT+CGG 0.487765 4_4:-23783406 None:intergenic
AACGTCAGTGACTTCATGGT+TGG 0.493568 4_4:+23787568 Msa0675250:CDS
GAAGCGGTTGTTAGGGAAGC+GGG 0.495250 4_4:-23783318 None:intergenic
AAAGGAAATGTTGTTGGAGG+TGG 0.498142 4_4:+23785357 Msa0675250:CDS
AGGAAGTCGTTGAAAGGTCG+TGG 0.502944 4_4:+23783619 Msa0675250:CDS
CACCATTGCAGCAGCAGTTG+AGG 0.503650 4_4:+23786056 Msa0675250:CDS
CAGCATTTCTCTGCCTAACA+AGG 0.504064 4_4:-23785250 None:intergenic
TATGAGAAAGAACGAAATGC+AGG 0.505695 4_4:+23786003 Msa0675250:CDS
AGAAATCAGATAAATAATGA+TGG 0.509438 4_4:+23786275 Msa0675250:CDS
ATTTAATGTACTAAATGCAT+TGG 0.509911 4_4:+23785383 Msa0675250:CDS
AGTCATCTCTTGATTTATGT+CGG 0.511289 4_4:-23785197 None:intergenic
AGCCTCAACTGCTGCTGCAA+TGG 0.511346 4_4:-23786058 None:intergenic
GAAAACAGTCAACACGGGTA+TGG 0.511478 4_4:+23786297 Msa0675250:CDS
GTATGAGCTCTGCTTTATCA+TGG 0.513231 4_4:+23784408 Msa0675250:CDS
AGTCAACACGGGTATGGAGC+TGG 0.515119 4_4:+23786303 Msa0675250:CDS
ATTGTCTTGATAAACAGTGC+TGG 0.518060 4_4:+23787060 Msa0675250:CDS
TTATCAACAAACTGTAAAGA+AGG 0.518475 4_4:-23788504 None:intergenic
CTTGTTGGCAACTCAATTGG+TGG 0.520296 4_4:+23786832 Msa0675250:CDS
TCCTTTGTGATTGGATACAA+AGG 0.520584 4_4:+23788357 Msa0675250:CDS
CTTACACTTGGCTTAGACAA+TGG 0.522594 4_4:-23787111 None:intergenic
GTGGAAAGAAGCGGTTGTTA+GGG 0.526265 4_4:-23783325 None:intergenic
TCTTCAAGAAGATAGTTAAG+AGG 0.526413 4_4:-23787952 None:intergenic
CTATCTTCTTGAAGATGTCA+AGG 0.530261 4_4:+23787960 Msa0675250:CDS
TGCATATTTGAGGTATTTGG+AGG 0.532972 4_4:+23785407 Msa0675250:CDS
AAGGAAAATGCGGGAAAGTG+AGG 0.535206 4_4:-23783277 None:intergenic
ACGTCAGTGACTTCATGGTT+GGG 0.536315 4_4:+23787569 Msa0675250:CDS
GATACACCAGCTTGCTACTC+AGG 0.536461 4_4:+23783681 Msa0675250:CDS
CCTTTGTGATTGGATACAAA+GGG 0.536638 4_4:+23788358 Msa0675250:CDS
CCTGTTTATGATGATATGAT+GGG 0.544219 4_4:+23785159 Msa0675250:CDS
ATTTGATGGAGAGTTCAAGT+GGG 0.551359 4_4:+23789307 Msa0675250:three_prime_UTR
AGGGAGTAACACGAAGATAT+GGG 0.551517 4_4:-23783232 None:intergenic
GAATACATAAATTGGAACTA+GGG 0.551772 4_4:-23783456 None:intergenic
GATTTGATGGAGAGTTCAAG+TGG 0.551900 4_4:+23789306 Msa0675250:three_prime_UTR
TTGTCTTGATAAACAGTGCT+GGG 0.551930 4_4:+23787061 Msa0675250:CDS
TTTGAGGTATTTGGAGGGAA+CGG 0.551995 4_4:+23785413 Msa0675250:CDS
GACATAAATCAAGAGATGAC+TGG 0.552493 4_4:+23785199 Msa0675250:CDS
TACAATGGCGGTGTCAGTTG+CGG 0.552980 4_4:-23783366 None:intergenic
ACATCAGCTGAAACCTTGTT+AGG 0.553481 4_4:+23785237 Msa0675250:CDS
TCTAGTTCCATTTCTGAACC+AGG 0.554130 4_4:-23784995 None:intergenic
TGTATTTGCGGAACAAGAGG+TGG 0.556168 4_4:+23784384 Msa0675250:CDS
ACACGGGTATGGAGCTGGAA+TGG 0.558876 4_4:+23786308 Msa0675250:CDS
AGATGACTGGAATTTGATCA+AGG 0.559141 4_4:+23785212 Msa0675250:CDS
ATGATGACTTTGAGAAACTA+CGG 0.560590 4_4:+23784936 Msa0675250:CDS
AGCACAATATGCACAAGCCC+AGG 0.562581 4_4:-23788574 None:intergenic
GATTTGAGGAAGTCGTTGAA+AGG 0.562668 4_4:+23783613 Msa0675250:CDS
GTCGTCATGGATAGCGGTGA+GGG 0.562699 4_4:-23783251 None:intergenic
TCCAGGACCACAGGCACACC+AGG 0.564941 4_4:-23787901 None:intergenic
GAAAATTGGAAGGAAAATGC+GGG 0.569149 4_4:-23783286 None:intergenic
GGAAAATTGGAAGGAAAATG+CGG 0.570033 4_4:-23783287 None:intergenic
GAGTTGCCAACAAGGTGGAC+CGG 0.571836 4_4:-23786823 None:intergenic
CCATGTACAAGAAGAACAGC+AGG 0.572158 4_4:-23786622 None:intergenic
TGCTTTGCAGAAGATCGAAA+GGG 0.572339 4_4:+23787733 Msa0675250:intron
CACCAATTGAGTTGCCAACA+AGG 0.572948 4_4:-23786831 None:intergenic
AACAGCAGGACCATCTTCAC+CGG 0.573387 4_4:-23786608 None:intergenic
GCACTTCATCATGGGGACAG+TGG 0.574452 4_4:-23788316 None:intergenic
TTGTGTATTTGCGGAACAAG+AGG 0.575726 4_4:+23784381 Msa0675250:CDS
GTGCTTTGCAGAAGATCGAA+AGG 0.578448 4_4:+23787732 Msa0675250:intron
TTAGGGAAGCGGGAAAGTGA+GGG 0.580284 4_4:-23783308 None:intergenic
AAGATGCTTTCCAGGACCAC+AGG 0.585145 4_4:-23787910 None:intergenic
CTCCGAACAGACGATCACCC+TGG 0.585613 4_4:+23783404 Msa0675250:CDS
ATACACGGTTTGGCTAGAGC+TGG 0.586316 4_4:+23786679 Msa0675250:CDS
GAAAGTGAGGAGAGTCGTCA+TGG 0.588023 4_4:-23783264 None:intergenic
CCAAACCGTGTATGTTGTCA+CGG 0.588302 4_4:-23786669 None:intergenic
TTATGATCCTGGTGTGCCTG+TGG 0.590576 4_4:+23787894 Msa0675250:CDS
CTTTATTGTTGATGTTGTGG+GGG 0.593635 4_4:+23786798 Msa0675250:CDS
AGTTGAGGCTGTGTGTTCGA+AGG 0.597781 4_4:+23786071 Msa0675250:CDS
TTTGATGGAGAGTTCAAGTG+GGG 0.599384 4_4:+23789308 Msa0675250:three_prime_UTR
CCTTGGTTGATTTCAAACGA+TGG 0.599684 4_4:-23784441 None:intergenic
AGCACTGTTTATCAAGACAA+TGG 0.601181 4_4:-23787058 None:intergenic
TCAAGTGGGGATGTTAAGCA+TGG 0.604498 4_4:+23789321 Msa0675250:three_prime_UTR
AGAAGCGGTTGTTAGGGAAG+CGG 0.608799 4_4:-23783319 None:intergenic
CTCTTTAAGCATAGCCACTG+TGG 0.610327 4_4:-23788152 None:intergenic
GCTGAAGTGGTGTAGTCACA+TGG 0.611717 4_4:-23784961 None:intergenic
TCAGAAATGGAACTAGATTG+GGG 0.613351 4_4:+23785001 Msa0675250:CDS
AAGCTGCAGTGAGGAGTCCA+GGG 0.615731 4_4:-23783421 None:intergenic
GAAAGTGAGGGAAAATTGGA+AGG 0.616704 4_4:-23783296 None:intergenic
CAAGTACCTGAGTAGCAAGC+TGG 0.617702 4_4:-23783687 None:intergenic
GAAAACAGGACATGGTACCT+GGG 0.619075 4_4:+23788557 Msa0675250:three_prime_UTR
CATTACCGTGACAACATACA+CGG 0.621080 4_4:+23786664 Msa0675250:CDS
GCATATTTGAGGTATTTGGA+GGG 0.621876 4_4:+23785408 Msa0675250:CDS
AGGCTACACAAGGCACTCCA+AGG 0.624878 4_4:+23784461 Msa0675250:CDS
ACTTTATTGTTGATGTTGTG+GGG 0.627427 4_4:+23786797 Msa0675250:CDS
ATAATTCCCAAAGACAGCGC+AGG 0.628587 4_4:-23785946 None:intergenic
GTGGCAGCTGAATATCCAAA+GGG 0.629662 4_4:-23786036 None:intergenic
TGAGGCTGTGTGTTCGAAGG+AGG 0.632016 4_4:+23786074 Msa0675250:CDS
GGTGGCAGCTGAATATCCAA+AGG 0.632948 4_4:-23786037 None:intergenic
GCTGAAATCTAGTGAGAACA+GGG 0.634491 4_4:+23785269 Msa0675250:CDS
GATACTTACTCGAAAGAATG+CGG 0.635162 4_4:-23783484 None:intergenic
ATGAGAAAGAACGAAATGCA+GGG 0.638724 4_4:+23786004 Msa0675250:CDS
CAGTTGCGGTTGAACCGAGA+CGG 0.640580 4_4:-23783352 None:intergenic
AGGAGAGTCGTCATGGATAG+CGG 0.644683 4_4:-23783257 None:intergenic
AAATCAACCAAGGCTACACA+AGG 0.646853 4_4:+23784451 Msa0675250:CDS
GGTAATGTTGAAAGCTGAAG+TGG 0.646946 4_4:-23784974 None:intergenic
CTGTAAAGAAGGCATAGCAG+TGG 0.652498 4_4:-23788493 None:intergenic
GACGGCGAGGTGGAAAGAAG+CGG 0.656048 4_4:-23783334 None:intergenic
GATTCTGGCACTTCATCATG+GGG 0.656651 4_4:-23788323 None:intergenic
ATGATGGAAAACAGTCAACA+CGG 0.661126 4_4:+23786291 Msa0675250:CDS
GCGGTTGAACCGAGACGGCG+AGG 0.666010 4_4:-23783347 None:intergenic
AGTCGTCATGGATAGCGGTG+AGG 0.669595 4_4:-23783252 None:intergenic
GTTGAACCGAGACGGCGAGG+TGG 0.670252 4_4:-23783344 None:intergenic
TTCTGACTCCAATGCCACAG+TGG 0.674350 4_4:+23788138 Msa0675250:CDS
TGATGGAAAACAGTCAACAC+GGG 0.674513 4_4:+23786292 Msa0675250:CDS
ACATAATGATTATAACAGCA+GGG 0.675845 4_4:+23788439 Msa0675250:three_prime_UTR
CCCTTTGTATCCAATCACAA+AGG 0.677588 4_4:-23788358 None:intergenic
ATTAAACTGAAAACAGGACA+TGG 0.681300 4_4:+23788549 Msa0675250:three_prime_UTR
ATGCTTAAAGAGCATTGTGA+TGG 0.681695 4_4:+23788163 Msa0675250:CDS
ATCGTGTTTGAACCATACAA+TGG 0.682012 4_4:-23783381 None:intergenic
CCATCGTTTGAAATCAACCA+AGG 0.682883 4_4:+23784441 Msa0675250:CDS
CAATTGAGTTGCCAACAAGG+TGG 0.702074 4_4:-23786828 None:intergenic
GAAAATTGGAAGCTGCAGTG+AGG 0.709487 4_4:-23783430 None:intergenic
GTGTTTGAACCATACAATGG+CGG 0.734624 4_4:-23783378 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATTTATAAACATATATT+TGG + chr4_4:23786856-23786875 Msa0675250:intron 10.0%
!!! TTTTTTATTTCATTTTGTTA+GGG + chr4_4:23788100-23788119 Msa0675250:intron 10.0%
!!! TAGAATATTTTTTAAAGTAT+TGG - chr4_4:23788622-23788641 None:intergenic 10.0%
!!! TACTTTAAAAAATATTCTAT+TGG + chr4_4:23788623-23788642 Msa0675250:intron 10.0%
!! GATATTATTGACAAAAAAAA+CGG - chr4_4:23784038-23784057 None:intergenic 15.0%
!!! GTTTTAAGATAAAAGTAAAA+AGG - chr4_4:23784318-23784337 None:intergenic 15.0%
!! TTAAAACAAATTCAATTCAT+CGG + chr4_4:23784331-23784350 Msa0675250:intron 15.0%
!! TACAATTTCAGATATTAAAT+TGG - chr4_4:23784585-23784604 None:intergenic 15.0%
!!! AATTTAATATCTGAAATTGT+AGG + chr4_4:23784584-23784603 Msa0675250:intron 15.0%
!!! TTCAATCAAATTAATCTTTT+TGG + chr4_4:23784668-23784687 Msa0675250:intron 15.0%
!! TCAATGTAATAAAGAAAAAT+TGG - chr4_4:23785605-23785624 None:intergenic 15.0%
!!! AAGGAGTTAATTTAATTTTT+TGG + chr4_4:23786223-23786242 Msa0675250:intron 15.0%
!!! AGTTAATTTAATTTTTTGGT+TGG + chr4_4:23786227-23786246 Msa0675250:intron 15.0%
!!! TTTCAATTCAAAAAAGTATA+CGG - chr4_4:23787346-23787365 None:intergenic 15.0%
!!! GTTTTTTATTTCATTTTGTT+AGG + chr4_4:23788099-23788118 Msa0675250:intron 15.0%
!!! AAAAGATCAATTTAAAACAA+AGG - chr4_4:23788275-23788294 None:intergenic 15.0%
!!! ATATTTTTTAAAGTATTGGA+AGG - chr4_4:23788618-23788637 None:intergenic 15.0%
!!! TTTATATTCTCCTTTTTTAT+TGG - chr4_4:23789571-23789590 None:intergenic 15.0%
!! TCCATAACAAAATAGATTAA+CGG + chr4_4:23783767-23783786 Msa0675250:intron 20.0%
!! TTAAAAATTCAAAGTGACAT+TGG + chr4_4:23784012-23784031 Msa0675250:intron 20.0%
!! AATCAGAGAAATATGTAAAA+TGG + chr4_4:23784074-23784093 Msa0675250:intron 20.0%
!! ATCAGAGAAATATGTAAAAT+GGG + chr4_4:23784075-23784094 Msa0675250:intron 20.0%
!!! AATATAATTAAGAGTGTCAT+AGG + chr4_4:23784101-23784120 Msa0675250:intron 20.0%
!!! ATATAATTAAGAGTGTCATA+GGG + chr4_4:23784102-23784121 Msa0675250:intron 20.0%
!!! ACTGATTCTAACATTTTTAT+TGG + chr4_4:23784550-23784569 Msa0675250:intron 20.0%
!! AATTTCAGATATTAAATTGG+TGG - chr4_4:23784582-23784601 None:intergenic 20.0%
!!! TTGGAGTTTCATTAATTTTA+AGG - chr4_4:23784626-23784645 None:intergenic 20.0%
!!! ATCAAATTAATCTTTTTGGT+TGG + chr4_4:23784672-23784691 Msa0675250:intron 20.0%
!!! TCAAATTAATCTTTTTGGTT+GGG + chr4_4:23784673-23784692 Msa0675250:intron 20.0%
!! GATTATTATAATTATCACAC+AGG + chr4_4:23784889-23784908 Msa0675250:intron 20.0%
!! ATTTAATGTACTAAATGCAT+TGG + chr4_4:23785383-23785402 Msa0675250:CDS 20.0%
!! ACAAATTGATATTGTCTTAT+TGG + chr4_4:23786130-23786149 Msa0675250:intron 20.0%
!!! TTTGTTCTCTTTTTTATCAA+AGG + chr4_4:23786204-23786223 Msa0675250:intron 20.0%
!! AGAAATCAGATAAATAATGA+TGG + chr4_4:23786275-23786294 Msa0675250:CDS 20.0%
!! GTTCTTAACTTATTTCAAAT+GGG - chr4_4:23786516-23786535 None:intergenic 20.0%
!! AGTTCTTAACTTATTTCAAA+TGG - chr4_4:23786517-23786536 None:intergenic 20.0%
!!! AAACAAAAGTGCTAATTTAT+TGG + chr4_4:23786557-23786576 Msa0675250:intron 20.0%
!!! AAGAGATTTATTTTGTAGAA+AGG - chr4_4:23786886-23786905 None:intergenic 20.0%
!!! CTATTGAAGATTTTACAAAA+TGG - chr4_4:23787270-23787289 None:intergenic 20.0%
!! TGTTAAATGAATCTTAAAGT+TGG + chr4_4:23787395-23787414 Msa0675250:intron 20.0%
!! ATATTGTCTAATTAAATGTC+AGG - chr4_4:23787437-23787456 None:intergenic 20.0%
!! ATCAATTAATTCTATCTTTC+TGG - chr4_4:23788041-23788060 None:intergenic 20.0%
!! ATGTAAAACATGAAGAAAAT+TGG - chr4_4:23788658-23788677 None:intergenic 20.0%
!!! AATGACATTTTAGTTAGATA+TGG - chr4_4:23788994-23789013 None:intergenic 20.0%
!! TATCGAAAATTCGTTTATTT+AGG - chr4_4:23789056-23789075 None:intergenic 20.0%
!! TTATATTGAGAGATATGAAT+GGG + chr4_4:23789083-23789102 Msa0675250:intron 20.0%
!! AAATATACCTAAAATGATAG+TGG - chr4_4:23789353-23789372 None:intergenic 20.0%
!! ATATATCTGTATTCATTCAT+AGG + chr4_4:23789392-23789411 Msa0675250:three_prime_UTR 20.0%
! GAATACATAAATTGGAACTA+GGG - chr4_4:23783459-23783478 None:intergenic 25.0%
! TCTAATCTCATGATTAAGTT+TGG + chr4_4:23783643-23783662 Msa0675250:CDS 25.0%
!! ACCGTTAATCTATTTTGTTA+TGG - chr4_4:23783771-23783790 None:intergenic 25.0%
!!! GCTGTTTTTATAAGCTATTA+TGG + chr4_4:23783808-23783827 Msa0675250:intron 25.0%
! AATAGATTGAAAACAGCTTA+TGG + chr4_4:23783843-23783862 Msa0675250:intron 25.0%
!! CCTACATTTTCATCATATAA+TGG - chr4_4:23784505-23784524 None:intergenic 25.0%
! CCATTATATGATGAAAATGT+AGG + chr4_4:23784502-23784521 Msa0675250:intron 25.0%
! TTTAGTCCTTGAAATTATAC+AGG - chr4_4:23784766-23784785 None:intergenic 25.0%
! TTATCTCTCTACAAGATTAT+TGG + chr4_4:23785068-23785087 Msa0675250:intron 25.0%
!! AACAATTATCACATGACTTT+TGG - chr4_4:23785120-23785139 None:intergenic 25.0%
! TGATAATTGTTCACTGAATT+AGG + chr4_4:23785129-23785148 Msa0675250:intron 25.0%
!!! CTAAGATTCTGTTTCTTTTT+TGG + chr4_4:23785477-23785496 Msa0675250:intron 25.0%
!!! TTTCTTTTTTGGCAATTTTC+AGG + chr4_4:23785488-23785507 Msa0675250:intron 25.0%
!! TTGATATTGTCTTATTGGTT+TGG + chr4_4:23786135-23786154 Msa0675250:intron 25.0%
! TTTGTCTTATCTGTTATACA+TGG + chr4_4:23786159-23786178 Msa0675250:intron 25.0%
! TTGTCTTATCTGTTATACAT+GGG + chr4_4:23786160-23786179 Msa0675250:intron 25.0%
! AGAACAAAAAACAAAGATCA+AGG - chr4_4:23786192-23786211 None:intergenic 25.0%
! AGCTCAGTATATACAATATT+TGG - chr4_4:23786754-23786773 None:intergenic 25.0%
!! TGAAGATTTTACAAAATGGA+GGG - chr4_4:23787266-23787285 None:intergenic 25.0%
!! TTGAAGATTTTACAAAATGG+AGG - chr4_4:23787267-23787286 None:intergenic 25.0%
! GTAAAATCTTCAATAGAAGT+TGG + chr4_4:23787274-23787293 Msa0675250:intron 25.0%
! TACACTTAAGGCAAATATTA+AGG - chr4_4:23787317-23787336 None:intergenic 25.0%
! GCATATTATTATGCACATTT+GGG - chr4_4:23787375-23787394 None:intergenic 25.0%
! AGCATATTATTATGCACATT+TGG - chr4_4:23787376-23787395 None:intergenic 25.0%
!! CTATTTACTTGTTAACTTTC+AGG + chr4_4:23787538-23787557 Msa0675250:intron 25.0%
!!! GAATTCTTTTGTTTTACTTG+AGG + chr4_4:23787597-23787616 Msa0675250:CDS 25.0%
! ACAAAAATTACACTTACTGT+TGG - chr4_4:23787656-23787675 None:intergenic 25.0%
! AGATTATAGAAGTAAACTAG+AGG - chr4_4:23787798-23787817 None:intergenic 25.0%
! TAAATTATTTGTATTGCACC+AGG + chr4_4:23787817-23787836 Msa0675250:intron 25.0%
! AAATTATTTGTATTGCACCA+GGG + chr4_4:23787818-23787837 Msa0675250:intron 25.0%
! TCATAAGACTTGATATGTAA+AGG - chr4_4:23787880-23787899 None:intergenic 25.0%
! GGAAAAGATTCTAATTATAC+AGG + chr4_4:23787981-23788000 Msa0675250:CDS 25.0%
!! ATTATACAGGTATTGTAACA+TGG + chr4_4:23787994-23788013 Msa0675250:intron 25.0%
!!! TTGTGATGGTGTTATAATTA+AGG + chr4_4:23788177-23788196 Msa0675250:CDS 25.0%
! ATAATTAAGGAATTAGATGC+TGG + chr4_4:23788190-23788209 Msa0675250:CDS 25.0%
!! TCAATTTAAAACAAAGGCTA+AGG - chr4_4:23788269-23788288 None:intergenic 25.0%
!! TTTCTTTTGCTTAACATTAC+AGG + chr4_4:23788293-23788312 Msa0675250:intron 25.0%
!!! TTGAAAGTAACATTTTAGCA+GGG + chr4_4:23788381-23788400 Msa0675250:CDS 25.0%
! TACATAATGATTATAACAGC+AGG + chr4_4:23788438-23788457 Msa0675250:three_prime_UTR 25.0%
! ACATAATGATTATAACAGCA+GGG + chr4_4:23788439-23788458 Msa0675250:three_prime_UTR 25.0%
! TTATCAACAAACTGTAAAGA+AGG - chr4_4:23788507-23788526 None:intergenic 25.0%
!!! CTTTACAGTTTGTTGATAAA+TGG + chr4_4:23788508-23788527 Msa0675250:three_prime_UTR 25.0%
! TAAAACATGAAGAAAATTGG+AGG - chr4_4:23788655-23788674 None:intergenic 25.0%
! TGATAGATGCTTAAATTACA+AGG + chr4_4:23788795-23788814 Msa0675250:intron 25.0%
! ACACTTATAGATATAAAGTC+AGG - chr4_4:23788828-23788847 None:intergenic 25.0%
! AGGTTCATAATATTGCTTTA+AGG - chr4_4:23788944-23788963 None:intergenic 25.0%
! TTCTAGATATCAGATTATGA+TGG + chr4_4:23789013-23789032 Msa0675250:intron 25.0%
! CTTATATTGAGAGATATGAA+TGG + chr4_4:23789082-23789101 Msa0675250:intron 25.0%
! TGTTCATATACTTGTGATAA+TGG + chr4_4:23789279-23789298 Msa0675250:intron 25.0%
!! TTGTTGTTGTATTCATTCAT+AGG + chr4_4:23789448-23789467 Msa0675250:intron 25.0%
! GTGTTGTATAATGTATTCAT+TGG + chr4_4:23789521-23789540 Msa0675250:intron 25.0%
! TTGTATAATGTATTCATTGG+TGG + chr4_4:23789524-23789543 Msa0675250:intron 25.0%
! AAATGTTTGGGTTTGGTAAA+GGG - chr4_4:23783209-23783228 None:intergenic 30.0%
AGATATGGGTACAAATGTTT+GGG - chr4_4:23783221-23783240 None:intergenic 30.0%
AAGATATGGGTACAAATGTT+TGG - chr4_4:23783222-23783241 None:intergenic 30.0%
CGAATACATAAATTGGAACT+AGG - chr4_4:23783460-23783479 None:intergenic 30.0%
!!! TTGGTTTTTTTGGCAATGTT+TGG + chr4_4:23783707-23783726 Msa0675250:intron 30.0%
! ACGAATTTTCACTTAACTAC+TGG - chr4_4:23783929-23783948 None:intergenic 30.0%
GCTGAAAGAACTAATACTTA+GGG - chr4_4:23783965-23783984 None:intergenic 30.0%
TGCTGAAAGAACTAATACTT+AGG - chr4_4:23783966-23783985 None:intergenic 30.0%
! GACTCTCATTTTCATTTGTT+TGG + chr4_4:23784791-23784810 Msa0675250:intron 30.0%
!! TTTGTTTGGTTGAGTTGATT+AGG + chr4_4:23784805-23784824 Msa0675250:intron 30.0%
! ATGATGACTTTGAGAAACTA+CGG + chr4_4:23784936-23784955 Msa0675250:CDS 30.0%
TTCAGAAATGGAACTAGATT+GGG + chr4_4:23785000-23785019 Msa0675250:CDS 30.0%
TCCTGTTTATGATGATATGA+TGG + chr4_4:23785158-23785177 Msa0675250:CDS 30.0%
CCTGTTTATGATGATATGAT+GGG + chr4_4:23785159-23785178 Msa0675250:CDS 30.0%
! TGATGATATGATGGGATTTA+TGG + chr4_4:23785167-23785186 Msa0675250:CDS 30.0%
AGTCATCTCTTGATTTATGT+CGG - chr4_4:23785200-23785219 None:intergenic 30.0%
GTAACAAACACAGATTCATT+TGG - chr4_4:23785333-23785352 None:intergenic 30.0%
! TCTGTGTTTGTTACACAAAA+AGG + chr4_4:23785339-23785358 Msa0675250:CDS 30.0%
ACACAAAAAGGAAATGTTGT+TGG + chr4_4:23785351-23785370 Msa0675250:CDS 30.0%
GAAACAGAATCTTAGAAAGA+GGG - chr4_4:23785472-23785491 None:intergenic 30.0%
AGAAACAGAATCTTAGAAAG+AGG - chr4_4:23785473-23785492 None:intergenic 30.0%
CAAAAAGCAGAAAACAAAGA+AGG - chr4_4:23785566-23785585 None:intergenic 30.0%
!!! TTAGTTTTGTTTACCTCGAA+CGG + chr4_4:23785690-23785709 Msa0675250:intron 30.0%
TTCAACACATGTTTCATTTG+CGG + chr4_4:23785773-23785792 Msa0675250:intron 30.0%
GCATCATTTATTGCACTATT+TGG + chr4_4:23785922-23785941 Msa0675250:CDS 30.0%
!!! TTAATTTTTTGGTTGGCTAG+TGG + chr4_4:23786234-23786253 Msa0675250:intron 30.0%
!! TGTTCAGGTATTGAATTGAT+TGG + chr4_4:23786337-23786356 Msa0675250:intron 30.0%
TTTGTCCCAACAAATTTATG+TGG + chr4_4:23786457-23786476 Msa0675250:intron 30.0%
TTGTCCCAACAAATTTATGT+GGG + chr4_4:23786458-23786477 Msa0675250:intron 30.0%
ATCATGTTGGTCATACATTT+GGG - chr4_4:23786485-23786504 None:intergenic 30.0%
AATCATGTTGGTCATACATT+TGG - chr4_4:23786486-23786505 None:intergenic 30.0%
! TTTTCTCAGTATACAATTGC+CGG + chr4_4:23786589-23786608 Msa0675250:intron 30.0%
TTTGGGCTATTACATTGTTA+GGG + chr4_4:23786710-23786729 Msa0675250:CDS 30.0%
AGACTTTATTGTTGATGTTG+TGG + chr4_4:23786795-23786814 Msa0675250:CDS 30.0%
GACTTTATTGTTGATGTTGT+GGG + chr4_4:23786796-23786815 Msa0675250:CDS 30.0%
ACTTTATTGTTGATGTTGTG+GGG + chr4_4:23786797-23786816 Msa0675250:CDS 30.0%
! AAGATTTTACAAAATGGAGG+GGG - chr4_4:23787264-23787283 None:intergenic 30.0%
! GAAGATTTTACAAAATGGAG+GGG - chr4_4:23787265-23787284 None:intergenic 30.0%
TATTATTATGCACATTTGGG+TGG - chr4_4:23787372-23787391 None:intergenic 30.0%
ATATATTAGAATGTGAACCC+TGG - chr4_4:23787838-23787857 None:intergenic 30.0%
AAGAAGATAGTTAAGAGGTA+TGG - chr4_4:23787950-23787969 None:intergenic 30.0%
TCTTCAAGAAGATAGTTAAG+AGG - chr4_4:23787955-23787974 None:intergenic 30.0%
! AACATGGATTTGAAATGTTG+TGG + chr4_4:23788010-23788029 Msa0675250:intron 30.0%
! ACATGGATTTGAAATGTTGT+GGG + chr4_4:23788011-23788030 Msa0675250:intron 30.0%
GATACTGAATGATAATTCTC+TGG + chr4_4:23788058-23788077 Msa0675250:intron 30.0%
TGAATACTATCCTTTGTGAT+TGG + chr4_4:23788348-23788367 Msa0675250:CDS 30.0%
!! GTTGAAAGTAACATTTTAGC+AGG + chr4_4:23788380-23788399 Msa0675250:CDS 30.0%
GACGTCAAAAAGATTATACT+TGG - chr4_4:23788409-23788428 None:intergenic 30.0%
! AGTATAATCTTTTTGACGTC+CGG + chr4_4:23788409-23788428 Msa0675250:exon 30.0%
TAATCATTATGTACAGTTGC+CGG - chr4_4:23788431-23788450 None:intergenic 30.0%
ACTAGTATATTAATGGAGTC+TGG - chr4_4:23788473-23788492 None:intergenic 30.0%
TCCTCAATTAAACTGAAAAC+AGG + chr4_4:23788543-23788562 Msa0675250:three_prime_UTR 30.0%
! TCCTGTTTTCAGTTTAATTG+AGG - chr4_4:23788547-23788566 None:intergenic 30.0%
ATTAAACTGAAAACAGGACA+TGG + chr4_4:23788549-23788568 Msa0675250:three_prime_UTR 30.0%
!! CATAATATTGCTTTAAGGCT+AGG - chr4_4:23788939-23788958 None:intergenic 30.0%
GATAATTTATCTGACGTTGA+AGG - chr4_4:23788964-23788983 None:intergenic 30.0%
! TTCGTTTATTTAGGATCACA+AGG - chr4_4:23789047-23789066 None:intergenic 30.0%
!! TGATAATGGTAGAGATTTGA+TGG + chr4_4:23789293-23789312 Msa0675250:intron 30.0%
! CAAATGTTTGGGTTTGGTAA+AGG - chr4_4:23783210-23783229 None:intergenic 35.0%
GAAAATTGGAAGGAAAATGC+GGG - chr4_4:23783289-23783308 None:intergenic 35.0%
GGAAAATTGGAAGGAAAATG+CGG - chr4_4:23783290-23783309 None:intergenic 35.0%
ATCGTGTTTGAACCATACAA+TGG - chr4_4:23783384-23783403 None:intergenic 35.0%
TGGAACTAGGGATTGAAAAT+TGG - chr4_4:23783447-23783466 None:intergenic 35.0%
CGGTGATCGAATACATAAAT+TGG - chr4_4:23783467-23783486 None:intergenic 35.0%
GATACTTACTCGAAAGAATG+CGG - chr4_4:23783487-23783506 None:intergenic 35.0%
ATCAAACTTCATCGAAGTGT+TGG + chr4_4:23783504-23783523 Msa0675250:intron 35.0%
! AAACTGACTCACTCTATTGA+TGG + chr4_4:23783527-23783546 Msa0675250:intron 35.0%
!!! ACTCAGGTACTTGGTTTTTT+TGG + chr4_4:23783697-23783716 Msa0675250:intron 35.0%
TCAACACATTGCAATCCATT+GGG + chr4_4:23784248-23784267 Msa0675250:intron 35.0%
AAATTCAATTCATCGGTCTC+AGG + chr4_4:23784338-23784357 Msa0675250:intron 35.0%
CAAAGCTACTTGTGTATTTG+CGG + chr4_4:23784372-23784391 Msa0675250:CDS 35.0%
! GTTTTCCATACTTCAATCCT+TGG - chr4_4:23784481-23784500 None:intergenic 35.0%
GTCCTTGAAATTATACAGGT+GGG - chr4_4:23784762-23784781 None:intergenic 35.0%
AGTCCTTGAAATTATACAGG+TGG - chr4_4:23784763-23784782 None:intergenic 35.0%
AGAATGTCAAACTTGTGTCA+TGG + chr4_4:23784830-23784849 Msa0675250:intron 35.0%
AACATTACCTGGTTCAGAAA+TGG + chr4_4:23784988-23785007 Msa0675250:CDS 35.0%
GTTCAGAAATGGAACTAGAT+TGG + chr4_4:23784999-23785018 Msa0675250:CDS 35.0%
TCAGAAATGGAACTAGATTG+GGG + chr4_4:23785001-23785020 Msa0675250:CDS 35.0%
!! TGTGGATGGATTTTCTTATC+AGG + chr4_4:23785030-23785049 Msa0675250:intron 35.0%
GGATATGTTGATGCACTTTA+CGG + chr4_4:23785089-23785108 Msa0675250:intron 35.0%
CCCATCATATCATCATAAAC+AGG - chr4_4:23785162-23785181 None:intergenic 35.0%
GACATAAATCAAGAGATGAC+TGG + chr4_4:23785199-23785218 Msa0675250:CDS 35.0%
AGATGACTGGAATTTGATCA+AGG + chr4_4:23785212-23785231 Msa0675250:CDS 35.0%
CAAAAAGGAAATGTTGTTGG+AGG + chr4_4:23785354-23785373 Msa0675250:CDS 35.0%
! TGCATATTTGAGGTATTTGG+AGG + chr4_4:23785407-23785426 Msa0675250:CDS 35.0%
! GCATATTTGAGGTATTTGGA+GGG + chr4_4:23785408-23785427 Msa0675250:CDS 35.0%
TGTTTCTCCGTATCATTAGA+AGG + chr4_4:23785632-23785651 Msa0675250:intron 35.0%
GTTTCTCCGTATCATTAGAA+GGG + chr4_4:23785633-23785652 Msa0675250:intron 35.0%
TGTATGCCCTTCTAATGATA+CGG - chr4_4:23785642-23785661 None:intergenic 35.0%
!!! TAGTTTTGTTTACCTCGAAC+GGG + chr4_4:23785691-23785710 Msa0675250:intron 35.0%
CTTTGCCTTAAATTTGTGCA+GGG + chr4_4:23785861-23785880 Msa0675250:intron 35.0%
TATGAGAAAGAACGAAATGC+AGG + chr4_4:23786003-23786022 Msa0675250:CDS 35.0%
ATGAGAAAGAACGAAATGCA+GGG + chr4_4:23786004-23786023 Msa0675250:CDS 35.0%
! ATGATGGAAAACAGTCAACA+CGG + chr4_4:23786291-23786310 Msa0675250:CDS 35.0%
TTACTATCACGAGAAATGCT+AGG + chr4_4:23786380-23786399 Msa0675250:intron 35.0%
TACTATCACGAGAAATGCTA+GGG + chr4_4:23786381-23786400 Msa0675250:intron 35.0%
GTATGACCAACATGATTTAG+TGG + chr4_4:23786489-23786508 Msa0675250:intron 35.0%
! GTTCTTCTTGTACATGGTTT+TGG + chr4_4:23786628-23786647 Msa0675250:CDS 35.0%
!!! TACATGGTTTTGGTGCATTT+GGG + chr4_4:23786638-23786657 Msa0675250:CDS 35.0%
GTTTGGGCTATTACATTGTT+AGG + chr4_4:23786709-23786728 Msa0675250:CDS 35.0%
GCTATTACATTGTTAGGGTT+TGG + chr4_4:23786715-23786734 Msa0675250:CDS 35.0%
TTGTATATACTGAGCTCTTG+TGG + chr4_4:23786758-23786777 Msa0675250:CDS 35.0%
TGTATATACTGAGCTCTTGT+GGG + chr4_4:23786759-23786778 Msa0675250:CDS 35.0%
CTTTATTGTTGATGTTGTGG+GGG + chr4_4:23786798-23786817 Msa0675250:CDS 35.0%
TCAAAAACATCAACAGAAGC+AGG - chr4_4:23786963-23786982 None:intergenic 35.0%
! TACATATTTTTCGCTACTCC+AGG + chr4_4:23786988-23787007 Msa0675250:intron 35.0%
ACAATAGCAACAATGTAACC+TGG - chr4_4:23787009-23787028 None:intergenic 35.0%
AGCACTGTTTATCAAGACAA+TGG - chr4_4:23787061-23787080 None:intergenic 35.0%
ATTGTCTTGATAAACAGTGC+TGG + chr4_4:23787060-23787079 Msa0675250:CDS 35.0%
TTGTCTTGATAAACAGTGCT+GGG + chr4_4:23787061-23787080 Msa0675250:CDS 35.0%
CATACTACACTAGTAAGACA+TGG + chr4_4:23787148-23787167 Msa0675250:intron 35.0%
!! TGGAGGGGGAAATTTTAAAA+TGG - chr4_4:23787250-23787269 None:intergenic 35.0%
ATACGGTCATGATACACTTA+AGG - chr4_4:23787329-23787348 None:intergenic 35.0%
! CATATCAAGTCTTATGATCC+TGG + chr4_4:23787883-23787902 Msa0675250:intron 35.0%
TAAAGCTAAAGATGCTTTCC+AGG - chr4_4:23787921-23787940 None:intergenic 35.0%
CTATCTTCTTGAAGATGTCA+AGG + chr4_4:23787960-23787979 Msa0675250:CDS 35.0%
!! ATGCTTAAAGAGCATTGTGA+TGG + chr4_4:23788163-23788182 Msa0675250:CDS 35.0%
!! AGGATAGTATTCACTGATTC+TGG - chr4_4:23788341-23788360 None:intergenic 35.0%
TCCTTTGTGATTGGATACAA+AGG + chr4_4:23788357-23788376 Msa0675250:CDS 35.0%
CCTTTGTGATTGGATACAAA+GGG + chr4_4:23788358-23788377 Msa0675250:CDS 35.0%
!! GCAGTGGACTAGTATATTAA+TGG - chr4_4:23788480-23788499 None:intergenic 35.0%
TTGAGAGATATGAATGGGAT+TGG + chr4_4:23789088-23789107 Msa0675250:intron 35.0%
TGAGAGATATGAATGGGATT+GGG + chr4_4:23789089-23789108 Msa0675250:intron 35.0%
ATGGCTTGAGACATAAGTTT+GGG + chr4_4:23789183-23789202 Msa0675250:intron 35.0%
! GGTTTGTAGATTTTACACTG+AGG + chr4_4:23789205-23789224 Msa0675250:intron 35.0%
ATTTGATGGAGAGTTCAAGT+GGG + chr4_4:23789307-23789326 Msa0675250:three_prime_UTR 35.0%
! GACTTAGCCACTATCATTTT+AGG + chr4_4:23789343-23789362 Msa0675250:three_prime_UTR 35.0%
!! TAATGTATTCATTGGTGGTG+TGG + chr4_4:23789529-23789548 Msa0675250:intron 35.0%
! TGGGTACAAATGTTTGGGTT+TGG - chr4_4:23783216-23783235 None:intergenic 40.0%
AGGGAGTAACACGAAGATAT+GGG - chr4_4:23783235-23783254 None:intergenic 40.0%
GAAAGTGAGGGAAAATTGGA+AGG - chr4_4:23783299-23783318 None:intergenic 40.0%
GTGTTTGAACCATACAATGG+CGG - chr4_4:23783381-23783400 None:intergenic 40.0%
! AGGGTTTTCTGATGAAATGC+TGG + chr4_4:23783567-23783586 Msa0675250:intron 40.0%
TTCTGATGAAATGCTGGAAC+TGG + chr4_4:23783573-23783592 Msa0675250:CDS 40.0%
TGTTCGCTGTTCAAGATTTG+AGG + chr4_4:23783599-23783618 Msa0675250:CDS 40.0%
GATTTGAGGAAGTCGTTGAA+AGG + chr4_4:23783613-23783632 Msa0675250:CDS 40.0%
! AAGCTATTATGGAGAGCATG+TGG + chr4_4:23783819-23783838 Msa0675250:intron 40.0%
TTCTCAGATAGTCTCACAAG+TGG + chr4_4:23783898-23783917 Msa0675250:intron 40.0%
AGATAGTCTCACAAGTGGTT+AGG + chr4_4:23783903-23783922 Msa0675250:intron 40.0%
CTCAACACATTGCAATCCAT+TGG + chr4_4:23784247-23784266 Msa0675250:intron 40.0%
CAACACATTGCAATCCATTG+GGG + chr4_4:23784249-23784268 Msa0675250:intron 40.0%
TTGTGTATTTGCGGAACAAG+AGG + chr4_4:23784381-23784400 Msa0675250:CDS 40.0%
GTATGAGCTCTGCTTTATCA+TGG + chr4_4:23784408-23784427 Msa0675250:CDS 40.0%
! CCTTGGTTGATTTCAAACGA+TGG - chr4_4:23784444-23784463 None:intergenic 40.0%
! CCATCGTTTGAAATCAACCA+AGG + chr4_4:23784441-23784460 Msa0675250:CDS 40.0%
AAATCAACCAAGGCTACACA+AGG + chr4_4:23784451-23784470 Msa0675250:CDS 40.0%
GACCCACCTGTATAATTTCA+AGG + chr4_4:23784757-23784776 Msa0675250:intron 40.0%
ATGTCAAACTTGTGTCATGG+TGG + chr4_4:23784833-23784852 Msa0675250:intron 40.0%
GGTAATGTTGAAAGCTGAAG+TGG - chr4_4:23784977-23784996 None:intergenic 40.0%
CTTCAGCTTTCAACATTACC+TGG + chr4_4:23784977-23784996 Msa0675250:CDS 40.0%
! TCTAGTTCCATTTCTGAACC+AGG - chr4_4:23784998-23785017 None:intergenic 40.0%
!! ACTAGATTGGGGTTAGTTTG+TGG + chr4_4:23785012-23785031 Msa0675250:intron 40.0%
ACATCAGCTGAAACCTTGTT+AGG + chr4_4:23785237-23785256 Msa0675250:CDS 40.0%
TGCTGAAATCTAGTGAGAAC+AGG + chr4_4:23785268-23785287 Msa0675250:CDS 40.0%
GCTGAAATCTAGTGAGAACA+GGG + chr4_4:23785269-23785288 Msa0675250:CDS 40.0%
AAAGGAAATGTTGTTGGAGG+TGG + chr4_4:23785357-23785376 Msa0675250:CDS 40.0%
!! ATGCATTGGCTGCATATTTG+AGG + chr4_4:23785397-23785416 Msa0675250:CDS 40.0%
! GGCTGCATATTTGAGGTATT+TGG + chr4_4:23785404-23785423 Msa0675250:CDS 40.0%
! TTTGAGGTATTTGGAGGGAA+CGG + chr4_4:23785413-23785432 Msa0675250:CDS 40.0%
!!! AGTTTTGTTTACCTCGAACG+GGG + chr4_4:23785692-23785711 Msa0675250:intron 40.0%
GCTTTGCCTTAAATTTGTGC+AGG + chr4_4:23785860-23785879 Msa0675250:intron 40.0%
GTGTACCCTGCACAAATTTA+AGG - chr4_4:23785869-23785888 None:intergenic 40.0%
TGATGGAAAACAGTCAACAC+GGG + chr4_4:23786292-23786311 Msa0675250:CDS 40.0%
! CTGGAATGGTTTTCTTGTTC+AGG + chr4_4:23786322-23786341 Msa0675250:CDS 40.0%
! GGGTCCCACATAAATTTGTT+GGG - chr4_4:23786465-23786484 None:intergenic 40.0%
TGGGTCCCACATAAATTTGT+TGG - chr4_4:23786466-23786485 None:intergenic 40.0%
ATGGGTCCACTAAATCATGT+TGG - chr4_4:23786498-23786517 None:intergenic 40.0%
TATACAATTGCCGGTGAAGA+TGG + chr4_4:23786598-23786617 Msa0675250:CDS 40.0%
!!! GTACATGGTTTTGGTGCATT+TGG + chr4_4:23786637-23786656 Msa0675250:CDS 40.0%
!!! ACATGGTTTTGGTGCATTTG+GGG + chr4_4:23786639-23786658 Msa0675250:CDS 40.0%
CATTACCGTGACAACATACA+CGG + chr4_4:23786664-23786683 Msa0675250:CDS 40.0%
TAGAGCTGGAAATCGAGTTT+GGG + chr4_4:23786693-23786712 Msa0675250:CDS 40.0%
TCACAAACATGCAGTGACTT+TGG + chr4_4:23786908-23786927 Msa0675250:intron 40.0%
! TTGCTATTGTTGCTCGAGTT+TGG + chr4_4:23787019-23787038 Msa0675250:CDS 40.0%
CTTACACTTGGCTTAGACAA+TGG - chr4_4:23787114-23787133 None:intergenic 40.0%
! ATCGACAGTGCTTGATTTTG+TGG + chr4_4:23787705-23787724 Msa0675250:intron 40.0%
TGCTTTGCAGAAGATCGAAA+GGG + chr4_4:23787733-23787752 Msa0675250:intron 40.0%
TGATTCTGGCACTTCATCAT+GGG - chr4_4:23788327-23788346 None:intergenic 40.0%
CCCTTTGTATCCAATCACAA+AGG - chr4_4:23788361-23788380 None:intergenic 40.0%
TCTGTCTTTCCGTTAAAGTG+AGG - chr4_4:23788704-23788723 None:intergenic 40.0%
!! TATGAATGGGATTGGGTTGA+TGG + chr4_4:23789096-23789115 Msa0675250:intron 40.0%
!! TTGGGTTGATGGTACATATG+AGG + chr4_4:23789107-23789126 Msa0675250:intron 40.0%
!! TGGGTTGATGGTACATATGA+GGG + chr4_4:23789108-23789127 Msa0675250:intron 40.0%
AAGTAGACTCAAGGTCAGTA+TGG + chr4_4:23789158-23789177 Msa0675250:intron 40.0%
GATGGCTTGAGACATAAGTT+TGG + chr4_4:23789182-23789201 Msa0675250:intron 40.0%
TGGCTTGAGACATAAGTTTG+GGG + chr4_4:23789184-23789203 Msa0675250:intron 40.0%
TACACTGAGGATGTTTATGC+TGG + chr4_4:23789218-23789237 Msa0675250:intron 40.0%
AGGATGTTTATGCTGGTGAA+TGG + chr4_4:23789225-23789244 Msa0675250:intron 40.0%
GATTTGATGGAGAGTTCAAG+TGG + chr4_4:23789306-23789325 Msa0675250:three_prime_UTR 40.0%
TTTGATGGAGAGTTCAAGTG+GGG + chr4_4:23789308-23789327 Msa0675250:three_prime_UTR 40.0%
GGAAGAGGGACCAATAAAAA+AGG + chr4_4:23789558-23789577 Msa0675250:intron 40.0%
GAGGGAGTAACACGAAGATA+TGG - chr4_4:23783236-23783255 None:intergenic 45.0%
AAGGAAAATGCGGGAAAGTG+AGG - chr4_4:23783280-23783299 None:intergenic 45.0%
GTGGAAAGAAGCGGTTGTTA+GGG - chr4_4:23783328-23783347 None:intergenic 45.0%
GAAAATTGGAAGCTGCAGTG+AGG - chr4_4:23783433-23783452 None:intergenic 45.0%
GAAAGGCGGTAGTAGTTTCT+TGG + chr4_4:23784205-23784224 Msa0675250:intron 45.0%
TCAATTCATCGGTCTCAGGA+TGG + chr4_4:23784342-23784361 Msa0675250:intron 45.0%
TGTATTTGCGGAACAAGAGG+TGG + chr4_4:23784384-23784403 Msa0675250:CDS 45.0%
GCACTCCAAGGATTGAAGTA+TGG + chr4_4:23784473-23784492 Msa0675250:CDS 45.0%
TCAAACTTGTGTCATGGTGG+TGG + chr4_4:23784836-23784855 Msa0675250:intron 45.0%
!! GATTGGGGTTAGTTTGTGGA+TGG + chr4_4:23785016-23785035 Msa0675250:intron 45.0%
CAGCATTTCTCTGCCTAACA+AGG - chr4_4:23785253-23785272 None:intergenic 45.0%
CGTGCTTCAGAAAGTCGAAA+TGG + chr4_4:23785898-23785917 Msa0675250:CDS 45.0%
ATAATTCCCAAAGACAGCGC+AGG - chr4_4:23785949-23785968 None:intergenic 45.0%
GTGGCAGCTGAATATCCAAA+GGG - chr4_4:23786039-23786058 None:intergenic 45.0%
!! TTTTGGTTGGCTAGTGGTAC+TGG + chr4_4:23786240-23786259 Msa0675250:intron 45.0%
GAAAACAGTCAACACGGGTA+TGG + chr4_4:23786297-23786316 Msa0675250:CDS 45.0%
CCATGTACAAGAAGAACAGC+AGG - chr4_4:23786625-23786644 None:intergenic 45.0%
CCTGCTGTTCTTCTTGTACA+TGG + chr4_4:23786622-23786641 Msa0675250:CDS 45.0%
CCAAACCGTGTATGTTGTCA+CGG - chr4_4:23786672-23786691 None:intergenic 45.0%
CTAGAGCTGGAAATCGAGTT+TGG + chr4_4:23786692-23786711 Msa0675250:CDS 45.0%
! CAATTGAGTTGCCAACAAGG+TGG - chr4_4:23786831-23786850 None:intergenic 45.0%
CACCTTGTTGGCAACTCAAT+TGG + chr4_4:23786829-23786848 Msa0675250:CDS 45.0%
! CACCAATTGAGTTGCCAACA+AGG - chr4_4:23786834-23786853 None:intergenic 45.0%
CTTGTTGGCAACTCAATTGG+TGG + chr4_4:23786832-23786851 Msa0675250:CDS 45.0%
AGCTGGTGAGAAAATTGTGC+TGG - chr4_4:23786936-23786955 None:intergenic 45.0%
! CGTCAGTTGTCACTTACACT+TGG - chr4_4:23787126-23787145 None:intergenic 45.0%
GACAAACGTCAGTGACTTCA+TGG + chr4_4:23787564-23787583 Msa0675250:CDS 45.0%
AACGTCAGTGACTTCATGGT+TGG + chr4_4:23787568-23787587 Msa0675250:CDS 45.0%
ACGTCAGTGACTTCATGGTT+GGG + chr4_4:23787569-23787588 Msa0675250:CDS 45.0%
GTGCTTTGCAGAAGATCGAA+AGG + chr4_4:23787732-23787751 Msa0675250:intron 45.0%
AGATCGAAAGGGCAGATGAT+TGG + chr4_4:23787744-23787763 Msa0675250:CDS 45.0%
! GTGGCATTGGAGTCAGAAAT+TGG - chr4_4:23788136-23788155 None:intergenic 45.0%
CTCTTTAAGCATAGCCACTG+TGG - chr4_4:23788155-23788174 None:intergenic 45.0%
GATTCTGGCACTTCATCATG+GGG - chr4_4:23788326-23788345 None:intergenic 45.0%
CTGATTCTGGCACTTCATCA+TGG - chr4_4:23788328-23788347 None:intergenic 45.0%
! CTGTAAAGAAGGCATAGCAG+TGG - chr4_4:23788496-23788515 None:intergenic 45.0%
TGAAAACAGGACATGGTACC+TGG + chr4_4:23788556-23788575 Msa0675250:three_prime_UTR 45.0%
GAAAACAGGACATGGTACCT+GGG + chr4_4:23788557-23788576 Msa0675250:three_prime_UTR 45.0%
!! GTTAAAGTGAGGTTCTGAGG+GGG - chr4_4:23788693-23788712 None:intergenic 45.0%
!! CGTTAAAGTGAGGTTCTGAG+GGG - chr4_4:23788694-23788713 None:intergenic 45.0%
! CCGTTAAAGTGAGGTTCTGA+GGG - chr4_4:23788695-23788714 None:intergenic 45.0%
CCCTCAGAACCTCACTTTAA+CGG + chr4_4:23788692-23788711 Msa0675250:intron 45.0%
TCCGTTAAAGTGAGGTTCTG+AGG - chr4_4:23788696-23788715 None:intergenic 45.0%
!! GGGTTGATGGTACATATGAG+GGG + chr4_4:23789109-23789128 Msa0675250:intron 45.0%
ACTCAAGGTCAGTATGGAGA+TGG + chr4_4:23789164-23789183 Msa0675250:intron 45.0%
ACAGAGTCGTAGTTCACTTC+TGG + chr4_4:23789256-23789275 Msa0675250:intron 45.0%
TCAAGTGGGGATGTTAAGCA+TGG + chr4_4:23789321-23789340 Msa0675250:three_prime_UTR 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG - chr4_4:23789426-23789445 None:intergenic 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG - chr4_4:23789427-23789446 None:intergenic 45.0%
!! TCATTGGTGGTGTGGTGTTT+AGG + chr4_4:23789537-23789556 Msa0675250:intron 45.0%
TGGTGTGGTGTTTAGGAAGA+GGG + chr4_4:23789544-23789563 Msa0675250:intron 45.0%
!!! TTTTTTATTTAATGAATTAT+TGG - chr4_4:23784645-23784664 None:intergenic 5.0%
!! TAAAATAAAAAATAATAGAA+CGG - chr4_4:23788235-23788254 None:intergenic 5.0%
AGGAGAGTCGTCATGGATAG+CGG - chr4_4:23783260-23783279 None:intergenic 50.0%
GAAAGTGAGGAGAGTCGTCA+TGG - chr4_4:23783267-23783286 None:intergenic 50.0%
GCGGGAAAGTGAGGGAAAAT+TGG - chr4_4:23783303-23783322 None:intergenic 50.0%
TTAGGGAAGCGGGAAAGTGA+GGG - chr4_4:23783311-23783330 None:intergenic 50.0%
AGAAGCGGTTGTTAGGGAAG+CGG - chr4_4:23783322-23783341 None:intergenic 50.0%
GGTGGAAAGAAGCGGTTGTT+AGG - chr4_4:23783329-23783348 None:intergenic 50.0%
! TACAATGGCGGTGTCAGTTG+CGG - chr4_4:23783369-23783388 None:intergenic 50.0%
CAACTGACACCGCCATTGTA+TGG + chr4_4:23783369-23783388 Msa0675250:CDS 50.0%
! TGGTGTTTTGCTTGCTCTGC+AGG + chr4_4:23783547-23783566 Msa0675250:intron 50.0%
! GGTGTTTTGCTTGCTCTGCA+GGG + chr4_4:23783548-23783567 Msa0675250:intron 50.0%
AGGAAGTCGTTGAAAGGTCG+TGG + chr4_4:23783619-23783638 Msa0675250:CDS 50.0%
!! GATACACCAGCTTGCTACTC+AGG + chr4_4:23783681-23783700 Msa0675250:CDS 50.0%
CAAGTACCTGAGTAGCAAGC+TGG - chr4_4:23783690-23783709 None:intergenic 50.0%
!! CAGCTTGCTACTCAGGTACT+TGG + chr4_4:23783688-23783707 Msa0675250:intron 50.0%
ACCTTAGACCGTCGTTGAGA+AGG + chr4_4:23784183-23784202 Msa0675250:intron 50.0%
TCCTTCTCAACGACGGTCTA+AGG - chr4_4:23784187-23784206 None:intergenic 50.0%
AGACCGTCGTTGAGAAGGAA+AGG + chr4_4:23784188-23784207 Msa0675250:intron 50.0%
! CACACAGGTGCTGCAAAATC+TGG + chr4_4:23784904-23784923 Msa0675250:intron 50.0%
GCTGAAGTGGTGTAGTCACA+TGG - chr4_4:23784964-23784983 None:intergenic 50.0%
TACAAACATAGCCCCGTTCG+AGG - chr4_4:23785706-23785725 None:intergenic 50.0%
ATTTGGTCCTGCGCTGTCTT+TGG + chr4_4:23785939-23785958 Msa0675250:CDS 50.0%
TTTGGTCCTGCGCTGTCTTT+GGG + chr4_4:23785940-23785959 Msa0675250:CDS 50.0%
GCAGGGTTCTTATCTCCCTT+TGG + chr4_4:23786021-23786040 Msa0675250:CDS 50.0%
GGTGGCAGCTGAATATCCAA+AGG - chr4_4:23786040-23786059 None:intergenic 50.0%
AGTTGAGGCTGTGTGTTCGA+AGG + chr4_4:23786071-23786090 Msa0675250:CDS 50.0%
!!! TGGCTAGTGGTACTGGCTTT+TGG + chr4_4:23786247-23786266 Msa0675250:intron 50.0%
AACAGCAGGACCATCTTCAC+CGG - chr4_4:23786611-23786630 None:intergenic 50.0%
CCGTGACAACATACACGGTT+TGG + chr4_4:23786669-23786688 Msa0675250:CDS 50.0%
! ATACACGGTTTGGCTAGAGC+TGG + chr4_4:23786679-23786698 Msa0675250:CDS 50.0%
TGTTGATGTTGTGGGGGAAC+CGG + chr4_4:23786804-23786823 Msa0675250:CDS 50.0%
CAACAGAAGCAGGAACAAGC+TGG - chr4_4:23786953-23786972 None:intergenic 50.0%
CAGACAGGCAGCAAAAGAAG+AGG - chr4_4:23787185-23787204 None:intergenic 50.0%
TTATGATCCTGGTGTGCCTG+TGG + chr4_4:23787894-23787913 Msa0675250:CDS 50.0%
AAGATGCTTTCCAGGACCAC+AGG - chr4_4:23787913-23787932 None:intergenic 50.0%
TTCTGACTCCAATGCCACAG+TGG + chr4_4:23788138-23788157 Msa0675250:CDS 50.0%
AAGCATAGCCACTGTGGCAT+TGG - chr4_4:23788149-23788168 None:intergenic 50.0%
AGCACAATATGCACAAGCCC+AGG - chr4_4:23788577-23788596 None:intergenic 50.0%
AGGGGTTTCGTGTTGAGACT+TGG + chr4_4:23789127-23789146 Msa0675250:intron 50.0%
! TCGTGTTGAGACTTGGTCCA+AGG + chr4_4:23789134-23789153 Msa0675250:intron 50.0%
! CGTGTTGAGACTTGGTCCAA+GGG + chr4_4:23789135-23789154 Msa0675250:intron 50.0%
GTCCAAGGGAAGTAGACTCA+AGG + chr4_4:23789149-23789168 Msa0675250:intron 50.0%
GACCTTGAGTCTACTTCCCT+TGG - chr4_4:23789154-23789173 None:intergenic 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG - chr4_4:23789422-23789441 None:intergenic 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG - chr4_4:23789428-23789447 None:intergenic 50.0%
CCACTTAGTGGGAAAAGGCT+TGG + chr4_4:23789425-23789444 Msa0675250:intron 50.0%
GTGGTGTGGTGTTTAGGAAG+AGG + chr4_4:23789543-23789562 Msa0675250:intron 50.0%
! GTCGTCATGGATAGCGGTGA+GGG - chr4_4:23783254-23783273 None:intergenic 55.0%
! AGTCGTCATGGATAGCGGTG+AGG - chr4_4:23783255-23783274 None:intergenic 55.0%
GTTAGGGAAGCGGGAAAGTG+AGG - chr4_4:23783312-23783331 None:intergenic 55.0%
GAAGCGGTTGTTAGGGAAGC+GGG - chr4_4:23783321-23783340 None:intergenic 55.0%
TTCTTTCCACCTCGCCGTCT+CGG + chr4_4:23783338-23783357 Msa0675250:CDS 55.0%
CAGTTGCGGTTGAACCGAGA+CGG - chr4_4:23783355-23783374 None:intergenic 55.0%
GTCCAGGGTGATCGTCTGTT+CGG - chr4_4:23783409-23783428 None:intergenic 55.0%
AAGCTGCAGTGAGGAGTCCA+GGG - chr4_4:23783424-23783443 None:intergenic 55.0%
CCGCCTTTCCTTCTCAACGA+CGG - chr4_4:23784194-23784213 None:intergenic 55.0%
CCGTCGTTGAGAAGGAAAGG+CGG + chr4_4:23784191-23784210 Msa0675250:intron 55.0%
TTGCAATCCATTGGGGCGTG+AGG + chr4_4:23784256-23784275 Msa0675250:intron 55.0%
TGCAATCCATTGGGGCGTGA+GGG + chr4_4:23784257-23784276 Msa0675250:intron 55.0%
CATCGGTCTCAGGATGGAAC+AGG + chr4_4:23784348-23784367 Msa0675250:intron 55.0%
! TGGAGTGCCTTGTGTAGCCT+TGG - chr4_4:23784461-23784480 None:intergenic 55.0%
! AGGCTACACAAGGCACTCCA+AGG + chr4_4:23784461-23784480 Msa0675250:CDS 55.0%
AGGGAACGGCTCGTGATGAT+TGG + chr4_4:23785427-23785446 Msa0675250:CDS 55.0%
CTCAACTGCTGCTGCAATGG+TGG - chr4_4:23786058-23786077 None:intergenic 55.0%
CACCATTGCAGCAGCAGTTG+AGG + chr4_4:23786056-23786075 Msa0675250:CDS 55.0%
AGCCTCAACTGCTGCTGCAA+TGG - chr4_4:23786061-23786080 None:intergenic 55.0%
TGAGGCTGTGTGTTCGAAGG+AGG + chr4_4:23786074-23786093 Msa0675250:CDS 55.0%
AGTCAACACGGGTATGGAGC+TGG + chr4_4:23786303-23786322 Msa0675250:CDS 55.0%
ACACGGGTATGGAGCTGGAA+TGG + chr4_4:23786308-23786327 Msa0675250:CDS 55.0%
GAGTTGCCAACAAGGTGGAC+CGG - chr4_4:23786826-23786845 None:intergenic 55.0%
GCACTTCATCATGGGGACAG+TGG - chr4_4:23788319-23788338 None:intergenic 55.0%
CGACCCCACTTAGTGGGAAA+AGG + chr4_4:23789420-23789439 Msa0675250:intron 55.0%
GACGGCGAGGTGGAAAGAAG+CGG - chr4_4:23783337-23783356 None:intergenic 60.0%
CTCCGAACAGACGATCACCC+TGG + chr4_4:23783404-23783423 Msa0675250:CDS 60.0%
GAAGCTGCAGTGAGGAGTCC+AGG - chr4_4:23783425-23783444 None:intergenic 60.0%
GACTGCCGACCCCACTTAGT+GGG + chr4_4:23789414-23789433 Msa0675250:intron 60.0%
GTTGAACCGAGACGGCGAGG+TGG - chr4_4:23783347-23783366 None:intergenic 65.0%
CTCTCACCCTCACGCCCCAA+TGG - chr4_4:23784266-23784285 None:intergenic 65.0%
CATTGGGGCGTGAGGGTGAG+AGG + chr4_4:23784264-23784283 Msa0675250:intron 65.0%
GGGGAACCGGTCCACCTTGT+TGG + chr4_4:23786817-23786836 Msa0675250:CDS 65.0%
TCCTGGTGTGCCTGTGGTCC+TGG + chr4_4:23787900-23787919 Msa0675250:CDS 65.0%
TCCAGGACCACAGGCACACC+AGG - chr4_4:23787904-23787923 None:intergenic 65.0%
GGACTGCCGACCCCACTTAG+TGG + chr4_4:23789413-23789432 Msa0675250:intron 65.0%
GCGGTTGAACCGAGACGGCG+AGG - chr4_4:23783350-23783369 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 23783206 23789616 23783206 ID=Msa0675250;Name=Msa0675250
chr4_4 mRNA 23783206 23789616 23783206 ID=Msa0675250-mRNA-1;Parent=Msa0675250;Name=Msa0675250-mRNA-1;_AED=0.20;_eAED=0.20;_QI=60|1|1|1|0.76|0.72|18|376|686
chr4_4 exon 23783206 23783497 23783206 ID=Msa0675250-mRNA-1:exon:6637;Parent=Msa0675250-mRNA-1
chr4_4 exon 23783569 23783702 23783569 ID=Msa0675250-mRNA-1:exon:6638;Parent=Msa0675250-mRNA-1
chr4_4 exon 23784370 23784519 23784370 ID=Msa0675250-mRNA-1:exon:6639;Parent=Msa0675250-mRNA-1
chr4_4 exon 23784911 23785022 23784911 ID=Msa0675250-mRNA-1:exon:6640;Parent=Msa0675250-mRNA-1
chr4_4 exon 23785151 23785454 23785151 ID=Msa0675250-mRNA-1:exon:6641;Parent=Msa0675250-mRNA-1
chr4_4 exon 23785882 23786095 23785882 ID=Msa0675250-mRNA-1:exon:6642;Parent=Msa0675250-mRNA-1
chr4_4 exon 23786254 23786343 23786254 ID=Msa0675250-mRNA-1:exon:6643;Parent=Msa0675250-mRNA-1
chr4_4 exon 23786598 23786853 23786598 ID=Msa0675250-mRNA-1:exon:6644;Parent=Msa0675250-mRNA-1
chr4_4 exon 23787010 23787128 23787010 ID=Msa0675250-mRNA-1:exon:6645;Parent=Msa0675250-mRNA-1
chr4_4 exon 23787560 23787658 23787560 ID=Msa0675250-mRNA-1:exon:6646;Parent=Msa0675250-mRNA-1
chr4_4 exon 23787743 23787790 23787743 ID=Msa0675250-mRNA-1:exon:6647;Parent=Msa0675250-mRNA-1
chr4_4 exon 23787892 23788002 23787892 ID=Msa0675250-mRNA-1:exon:6648;Parent=Msa0675250-mRNA-1
chr4_4 exon 23788121 23788211 23788121 ID=Msa0675250-mRNA-1:exon:6649;Parent=Msa0675250-mRNA-1
chr4_4 exon 23788315 23788460 23788315 ID=Msa0675250-mRNA-1:exon:6650;Parent=Msa0675250-mRNA-1
chr4_4 exon 23788481 23788633 23788481 ID=Msa0675250-mRNA-1:exon:6651;Parent=Msa0675250-mRNA-1
chr4_4 exon 23789305 23789413 23789305 ID=Msa0675250-mRNA-1:exon:6652;Parent=Msa0675250-mRNA-1
chr4_4 exon 23789470 23789501 23789470 ID=Msa0675250-mRNA-1:exon:6653;Parent=Msa0675250-mRNA-1
chr4_4 exon 23789580 23789616 23789580 ID=Msa0675250-mRNA-1:exon:6654;Parent=Msa0675250-mRNA-1
chr4_4 five_prime_UTR 23783206 23783265 23783206 ID=Msa0675250-mRNA-1:five_prime_utr;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23783266 23783497 23783266 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23783569 23783702 23783569 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23784370 23784519 23784370 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23784911 23785022 23784911 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23785151 23785454 23785151 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23785882 23786095 23785882 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23786254 23786343 23786254 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23786598 23786853 23786598 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23787010 23787128 23787010 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23787560 23787658 23787560 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23787743 23787790 23787743 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23787892 23788002 23787892 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23788121 23788211 23788121 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 CDS 23788315 23788415 23788315 ID=Msa0675250-mRNA-1:cds;Parent=Msa0675250-mRNA-1
chr4_4 three_prime_UTR 23788416 23788460 23788416 ID=Msa0675250-mRNA-1:three_prime_utr;Parent=Msa0675250-mRNA-1
chr4_4 three_prime_UTR 23788481 23788633 23788481 ID=Msa0675250-mRNA-1:three_prime_utr;Parent=Msa0675250-mRNA-1
chr4_4 three_prime_UTR 23789305 23789413 23789305 ID=Msa0675250-mRNA-1:three_prime_utr;Parent=Msa0675250-mRNA-1
chr4_4 three_prime_UTR 23789470 23789501 23789470 ID=Msa0675250-mRNA-1:three_prime_utr;Parent=Msa0675250-mRNA-1
chr4_4 three_prime_UTR 23789580 23789616 23789580 ID=Msa0675250-mRNA-1:three_prime_utr;Parent=Msa0675250-mRNA-1
Gene Sequence

>Msa0675250

ATGACGACTCTCCTCACTTTCCCGCATTTTCCTTCCAATTTTCCCTCACTTTCCCGCTTCCCTAACAACCGCTTCTTTCCACCTCGCCGTCTCGGTTCAACCGCAACTGACACCGCCATTGTATGGTTCAAACACGATCTCCGAACAGACGATCACCCTGGACTCCTCACTGCAGCTTCCAATTTTCAATCCCTAGTTCCAATTTATGTATTCGATCACCGCATTCTTTCGAGGTTTTCTGATGAAATGCTGGAACTGGTTTTGTTCGCTGTTCAAGATTTGAGGAAGTCGTTGAAAGGTCGTGGTTCTAATCTCATGATTAAGTTTGGTAATGCTGAGAATGTGATACACCAGCTTGCTACTCAGGTCAAAGCTACTTGTGTATTTGCGGAACAAGAGGTGGAGTATGAGCTCTGCTTTATCATGGATGTTGTCAACCATCGTTTGAAATCAACCAAGGCTACACAAGGCACTCCAAGGATTGAAGTATGGAAAACTCCATTATATGATGAAAATGTGCTGCAAAATCTGGCTGCATCATATGATGACTTTGAGAAACTACGGCTCCATGTGACTACACCACTTCAGCTTTCAACATTACCTGGTTCAGAAATGGAACTAGATTGGGGTGATATTCCTGTTTATGATGATATGATGGGATTTATGGCTAAGAACCGACATAAATCAAGAGATGACTGGAATTTGATCAAGGAGACATCAGCTGAAACCTTGTTAGGCAGAGAAATGCTGAAATCTAGTGAGAACAGGGAGAGAAGTTATAGCTTTAGACAGATTCAGTCAAGTGAACCAAATGAATCTGTGTTTGTTACACAAAAAGGAAATGTTGTTGGAGGTGGAACATTTAATGTACTAAATGCATTGGCTGCATATTTGAGGTATTTGGAGGGAACGGCTCGTGATGATTGGCAAGAGGTACACGAAAAACTTCGTGCTTCAGAAAGTCGAAATGGAGCATCATTTATTGCACTATTTGGTCCTGCGCTGTCTTTGGGAATTATATCTAGAAGAAGAGTACACTATGAAGCTATCAAATATGAGAAAGAACGAAATGCAGGGTTCTTATCTCCCTTTGGATATTCAGCTGCCACCATTGCAGCAGCAGTTGAGGCTGTGTGTTCGAAGGAGTGGTACTGGCTTTTGGCTTTGAGAAATCAGATAAATAATGATGGAAAACAGTCAACACGGGTATGGAGCTGGAATGGTTTTCTTGTTCAGTATACAATTGCCGGTGAAGATGGTCCTGCTGTTCTTCTTGTACATGGTTTTGGTGCATTTGGGGAGCATTACCGTGACAACATACACGGTTTGGCTAGAGCTGGAAATCGAGTTTGGGCTATTACATTGTTAGGGTTTGGCAAATCAGAAAAGCCAAATATTGTATATACTGAGCTCTTGTGGGCTGAACTATTGAGAGACTTTATTGTTGATGTTGTGGGGGAACCGGTCCACCTTGTTGGCAACTCAATTGGTGGTTACATTGTTGCTATTGTTGCTCGAGTTTGGAGCGTTCTGATCAAATCCATTGTCTTGATAAACAGTGCTGGGAATGTTATCTCGAGAAATTCATCAACACCATTGTCTAAGCCAAGTGATAGACAAACGTCAGTGACTTCATGGTTGGGTTCTCGAATTCTTTTGTTTTACTTGAGGCTAAGAATTCAAGACATTGTTAAGAAATGTTATCCAACAAAGATCGAAAGGGCAGATGATTGGCTCATAAATGAAATGCTAAGAGCTTCTTATGATCCTGGTGTGCCTGTGGTCCTGGAAAGCATCTTTAGCTTTAATCTTTCCATACCTCTTAACTATCTTCTTGAAGATGTCAAGGAAAAGATTCTAATTATACAGGGAATGAAAGATCCAATTTCTGACTCCAATGCCACAGTGGCTATGCTTAAAGAGCATTGTGATGGTGTTATAATTAAGGAATTAGATGCTGGCCACTGTCCCCATGATGAAGTGCCAGAATCAGTGAATACTATCCTTTGTGATTGGATACAAAGGGTTGAAAGTAACATTTTAGCAGGGTTCCAAGTATAA
Protein sequence

>Msa0675250

MTTLLTFPHFPSNFPSLSRFPNNRFFPPRRLGSTATDTAIVWFKHDLRTDDHPGLLTAASNFQSLVPIYVFDHRILSRFSDEMLELVLFAVQDLRKSLKGRGSNLMIKFGNAENVIHQLATQVKATCVFAEQEVEYELCFIMDVVNHRLKSTKATQGTPRIEVWKTPLYDENVLQNLAASYDDFEKLRLHVTTPLQLSTLPGSEMELDWGDIPVYDDMMGFMAKNRHKSRDDWNLIKETSAETLLGREMLKSSENRERSYSFRQIQSSEPNESVFVTQKGNVVGGGTFNVLNALAAYLRYLEGTARDDWQEVHEKLRASESRNGASFIALFGPALSLGIISRRRVHYEAIKYEKERNAGFLSPFGYSAATIAAAVEAVCSKEWYWLLALRNQINNDGKQSTRVWSWNGFLVQYTIAGEDGPAVLLVHGFGAFGEHYRDNIHGLARAGNRVWAITLLGFGKSEKPNIVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYIVAIVARVWSVLIKSIVLINSAGNVISRNSSTPLSKPSDRQTSVTSWLGSRILLFYLRLRIQDIVKKCYPTKIERADDWLINEMLRASYDPGVPVVLESIFSFNLSIPLNYLLEDVKEKILIIQGMKDPISDSNATVAMLKEHCDGVIIKELDAGHCPHDEVPESVNTILCDWIQRVESNILAGFQV*