Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084250 | XP_024640795.1 | 97.959 | 294 | 6 | 0 | 1 | 294 | 1 | 294 | 0.0 | 596 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084250 | sp|Q9LRN8|RK3B_ARATH | 66.975 | 324 | 77 | 4 | 1 | 294 | 1 | 324 | 2.26e-146 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084250 | A0A396JZB7 | 97.959 | 294 | 6 | 0 | 1 | 294 | 1 | 294 | 0.0 | 596 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036330 | Msa0084250 | 0.812444 | 4.226329e-51 | -8.615850e-47 |
| Msa0040220 | Msa0084250 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
| Msa0084250 | Msa0130420 | 0.917187 | 7.204807e-86 | -8.615850e-47 |
| Msa0084250 | Msa0176390 | 0.800144 | 1.653864e-48 | -8.615850e-47 |
| Msa0084250 | Msa0475810 | 0.814182 | 1.754728e-51 | -8.615850e-47 |
| Msa0084250 | Msa1078870 | 0.801426 | 9.053095e-49 | -8.615850e-47 |
| Msa0084250 | Msa1426120 | 0.810236 | 1.274107e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084250 | MtrunA17_Chr1g0198561 | 97.959 | 294 | 6 | 0 | 1 | 294 | 1 | 294 | 0.0 | 596 |
| Msa0084250 | MtrunA17_Chr6g0450631 | 92.517 | 294 | 22 | 0 | 1 | 294 | 1 | 294 | 0.0 | 570 |
| Msa0084250 | MtrunA17_Chr2g0324401 | 94.340 | 106 | 6 | 0 | 189 | 294 | 1 | 106 | 1.82e-70 | 213 |
| Msa0084250 | MtrunA17_Chr3g0145851 | 41.063 | 207 | 116 | 6 | 49 | 251 | 58 | 262 | 6.02e-43 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084250 | AT3G17465.1 | 66.975 | 324 | 77 | 4 | 1 | 294 | 1 | 324 | 2.30e-147 | 416 |
| Msa0084250 | AT2G43030.1 | 38.835 | 206 | 122 | 4 | 49 | 251 | 57 | 261 | 4.58e-39 | 138 |
Find 106 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGGATGTGGATCCATTTA+TGG | 0.158517 | 1_2:-63590406 | Msa0084250:CDS |
| ACACCAGTTCTTTGTGAATT+TGG | 0.165812 | 1_2:+63593135 | None:intergenic |
| TGACTGCTCATTGGGATAAA+TGG | 0.166624 | 1_2:-63593092 | Msa0084250:CDS |
| CTCACTGTTCAGGTCTTTAA+AGG | 0.228704 | 1_2:-63591205 | Msa0084250:intron |
| CTTTAATCAGTAACCATAAA+TGG | 0.233502 | 1_2:+63590393 | None:intergenic |
| GAATTCCAATTTCTATCCTT+TGG | 0.239774 | 1_2:-63593062 | Msa0084250:CDS |
| AAACCTTTGGTTGCTGATCT+TGG | 0.318983 | 1_2:-63590426 | Msa0084250:CDS |
| AAGGTCAGTGCCAAATAATT+TGG | 0.321682 | 1_2:+63590121 | None:intergenic |
| TCTACCCAAAGGATAGAAAT+TGG | 0.334271 | 1_2:+63593057 | None:intergenic |
| AACCTTTGGTTGCTGATCTT+GGG | 0.341776 | 1_2:-63590425 | Msa0084250:CDS |
| ACCCACATCAAATTTCTTGC+TGG | 0.343726 | 1_2:+63591112 | None:intergenic |
| GTTCAGATGTGGAGACTATA+AGG | 0.352256 | 1_2:-63593188 | Msa0084250:CDS |
| CATACTGCCCGGGAACAAAA+TGG | 0.352881 | 1_2:+63592253 | None:intergenic |
| CAGGGTGTAATGAAGAAGTA+TGG | 0.352968 | 1_2:-63591433 | Msa0084250:CDS |
| ATTGCTCTCGATACCCATTT+CGG | 0.378222 | 1_2:+63594404 | None:intergenic |
| GCCCTAAAATGACCCACTTC+AGG | 0.379527 | 1_2:+63592363 | None:intergenic |
| GATGGACAAAAGGGTATAGT+AGG | 0.388477 | 1_2:+63594353 | None:intergenic |
| TCATCTGAATCTTCATCTTC+CGG | 0.389387 | 1_2:+63590453 | None:intergenic |
| AGCACTATTTCCCACCGAAA+TGG | 0.389573 | 1_2:-63594418 | None:intergenic |
| AATGAACCCAAAACCCTAGA+TGG | 0.393729 | 1_2:+63594335 | None:intergenic |
| TTCAGATGATATGAAACCTT+TGG | 0.395479 | 1_2:-63590439 | Msa0084250:CDS |
| AATTCCAATTTCTATCCTTT+GGG | 0.400773 | 1_2:-63593061 | Msa0084250:CDS |
| ATGAAGAAGTATGGATTTCA+TGG | 0.403214 | 1_2:-63591424 | Msa0084250:CDS |
| GACTGCTCATTGGGATAAAT+GGG | 0.404613 | 1_2:-63593091 | Msa0084250:CDS |
| GGTTGCTGATCTTGGGGATG+TGG | 0.407346 | 1_2:-63590418 | Msa0084250:CDS |
| GAACAATAGCCTTCCTTCTC+AGG | 0.410835 | 1_2:+63593006 | None:intergenic |
| TAAAGAGATAGTTCCACAAA+TGG | 0.411274 | 1_2:-63590375 | Msa0084250:three_prime_UTR |
| TAGAAAGATGCCAGGGAGAA+TGG | 0.416986 | 1_2:-63591182 | Msa0084250:CDS |
| TGCTTCCCACCCATTCTCCC+TGG | 0.421120 | 1_2:+63591172 | None:intergenic |
| ACAAAGTTCCCTGTAGCTCC+TGG | 0.431609 | 1_2:+63590543 | None:intergenic |
| AGGAATACTTGGTCCTTGTA+AGG | 0.431878 | 1_2:-63591350 | Msa0084250:intron |
| GCACTATTTCCCACCGAAAT+GGG | 0.441587 | 1_2:-63594417 | None:intergenic |
| GATTGGTTGTGGACAGAAGA+AGG | 0.441589 | 1_2:-63592403 | Msa0084250:CDS |
| ACACAGGTCCCAGGAGCTAC+AGG | 0.448282 | 1_2:-63590552 | Msa0084250:intron |
| CCTGCAAATAAGTGTAGACT+TGG | 0.448720 | 1_2:-63590189 | Msa0084250:intron |
| ACCTTTGGTTGCTGATCTTG+GGG | 0.448994 | 1_2:-63590424 | Msa0084250:CDS |
| CAAAACCCTAGATGGACAAA+AGG | 0.452437 | 1_2:+63594343 | None:intergenic |
| ATGTGGAATGACTGCTCATT+GGG | 0.453159 | 1_2:-63593100 | Msa0084250:CDS |
| TCTTCCGGCACAAAGTAAGT+TGG | 0.469195 | 1_2:+63590468 | None:intergenic |
| AGATGACAACATTGTCTCTC+AGG | 0.475183 | 1_2:-63593037 | Msa0084250:CDS |
| ACACCAAATTCACAAAGAAC+TGG | 0.478282 | 1_2:-63593138 | Msa0084250:CDS |
| CTTCCGGCACAAAGTAAGTT+GGG | 0.483444 | 1_2:+63590469 | None:intergenic |
| AGAAAGATGCCAGGGAGAAT+GGG | 0.487342 | 1_2:-63591181 | Msa0084250:CDS |
| AGAAATTTGATGTGGGTGAA+AGG | 0.489286 | 1_2:-63591106 | Msa0084250:CDS |
| GGACTCCATCCAACCTTACA+AGG | 0.491579 | 1_2:+63591337 | None:intergenic |
| AAAGAGATAGTTCCACAAAT+GGG | 0.492226 | 1_2:-63590374 | Msa0084250:three_prime_UTR |
| CATAGAACCATGGGATCTAC+AGG | 0.492630 | 1_2:-63591370 | Msa0084250:CDS |
| ACAGGAATCACCAAAGGAAA+AGG | 0.499760 | 1_2:-63592222 | Msa0084250:CDS |
| AATGTGGAATGACTGCTCAT+TGG | 0.503569 | 1_2:-63593101 | Msa0084250:CDS |
| ACATTAAGTGATGTACCAAC+AGG | 0.507292 | 1_2:+63592279 | None:intergenic |
| TATGTGCTTTCGAATTCCCA+TGG | 0.513084 | 1_2:+63591389 | None:intergenic |
| AGATGAAGATGAAGATAGTG+AGG | 0.515760 | 1_2:+63594303 | None:intergenic |
| TCTTGAAGCTTCCTCTTCAT+CGG | 0.518555 | 1_2:+63592330 | None:intergenic |
| AAAAGGGTATAGTAGGGTGT+TGG | 0.525900 | 1_2:+63594360 | None:intergenic |
| GAATTTGGTGTCATCACACT+AGG | 0.526237 | 1_2:+63593150 | None:intergenic |
| CTCAAGGAGTTCCGATGAAG+AGG | 0.527266 | 1_2:-63592341 | Msa0084250:CDS |
| TTTGATGTGGGTGAAAGGCC+AGG | 0.528326 | 1_2:-63591101 | Msa0084250:intron |
| AAAGGAAGTATAGATGTGTC+AGG | 0.528945 | 1_2:+63590492 | None:intergenic |
| GGAAGGCTATTGTTCTCTCC+AGG | 0.530451 | 1_2:-63592998 | Msa0084250:intron |
| AATCGCGGCAGTGGTACCAC+GGG | 0.531508 | 1_2:+63593216 | None:intergenic |
| ATGGGATCTACAGGAATACT+TGG | 0.533632 | 1_2:-63591361 | Msa0084250:CDS |
| TGTGATGTCAACATACTGCC+CGG | 0.537181 | 1_2:+63592242 | None:intergenic |
| TCATCTTCGCATCTCAACTC+AGG | 0.540254 | 1_2:-63594280 | Msa0084250:intron |
| GAGGATGCACTTCTTCCTGT+TGG | 0.552055 | 1_2:-63592294 | Msa0084250:CDS |
| TTTCCCAACTTACTTTGTGC+CGG | 0.552953 | 1_2:-63590472 | Msa0084250:CDS |
| CAAAGTTCCCTGTAGCTCCT+GGG | 0.553971 | 1_2:+63590544 | None:intergenic |
| CATGGAGGTTCAGCATCCCA+TGG | 0.557351 | 1_2:-63591406 | Msa0084250:CDS |
| ACACTTGACAAAGCCTGAAG+TGG | 0.560843 | 1_2:-63592376 | Msa0084250:CDS |
| TTTAAAGGTAGAAAGATGCC+AGG | 0.564006 | 1_2:-63591190 | Msa0084250:CDS |
| AAAACCCTAGATGGACAAAA+GGG | 0.565069 | 1_2:+63594344 | None:intergenic |
| TCAGGTCAAAACTCCTGAGA+AGG | 0.567631 | 1_2:-63593019 | Msa0084250:CDS |
| CTCTCGATACCCATTTCGGT+GGG | 0.570281 | 1_2:+63594408 | None:intergenic |
| ATGTGCTTTCGAATTCCCAT+GGG | 0.571228 | 1_2:+63591390 | None:intergenic |
| AAGTATTCCTGTAGATCCCA+TGG | 0.577273 | 1_2:+63591363 | None:intergenic |
| AACTAGAACTTATCGAGTGA+AGG | 0.580719 | 1_2:+63590258 | None:intergenic |
| TCAAGAGTTTCGAGTGACAG+AGG | 0.581725 | 1_2:-63592313 | Msa0084250:CDS |
| GTGTGCACAACACAGGTCCC+AGG | 0.582644 | 1_2:-63590561 | Msa0084250:intron |
| TCGAAAGCACATAGAACCAT+GGG | 0.582779 | 1_2:-63591379 | Msa0084250:CDS |
| AAATCGCGGCAGTGGTACCA+CGG | 0.587214 | 1_2:+63593215 | None:intergenic |
| ATGGAGGTTCAGCATCCCAT+GGG | 0.591854 | 1_2:-63591405 | Msa0084250:CDS |
| GGGCAGTATGTTGACATCAC+AGG | 0.594209 | 1_2:-63592240 | Msa0084250:CDS |
| AAGATGCCAGGGAGAATGGG+TGG | 0.599236 | 1_2:-63591178 | Msa0084250:CDS |
| GCTCTCGATACCCATTTCGG+TGG | 0.599736 | 1_2:+63594407 | None:intergenic |
| ATGGACAAAAGGGTATAGTA+GGG | 0.604099 | 1_2:+63594354 | None:intergenic |
| GGCACAAAGTAAGTTGGGAA+AGG | 0.607369 | 1_2:+63590474 | None:intergenic |
| AAAATTCAAATAACAGAACA+TGG | 0.608055 | 1_2:+63590324 | None:intergenic |
| ACCTCTTGAAAACGCCAGCA+TGG | 0.609546 | 1_2:+63593263 | None:intergenic |
| CACTTGACAAAGCCTGAAGT+GGG | 0.609676 | 1_2:-63592375 | Msa0084250:CDS |
| TTCGAAAGCACATAGAACCA+TGG | 0.614239 | 1_2:-63591380 | Msa0084250:CDS |
| GTCAAAACTCCTGAGAAGGA+AGG | 0.621009 | 1_2:-63593015 | Msa0084250:CDS |
| ATCCAGCAAGAAATTTGATG+TGG | 0.622717 | 1_2:-63591114 | Msa0084250:CDS |
| CACAGGTCCCAGGAGCTACA+GGG | 0.625211 | 1_2:-63590551 | Msa0084250:intron |
| GATGAAGATGAAGATAGTGA+GGG | 0.625952 | 1_2:+63594304 | None:intergenic |
| GTGATGTCAACATACTGCCC+GGG | 0.631463 | 1_2:+63592243 | None:intergenic |
| AGATGCCAGGGAGAATGGGT+GGG | 0.644345 | 1_2:-63591177 | Msa0084250:CDS |
| GGTGTTATAGCTGTAAAATG+TGG | 0.647527 | 1_2:-63593117 | Msa0084250:CDS |
| TCCCCAAGATCAGCAACCAA+AGG | 0.647605 | 1_2:+63590423 | None:intergenic |
| GACATCACAGGAATCACCAA+AGG | 0.651363 | 1_2:-63592228 | Msa0084250:CDS |
| CAATGTTGTCATCTACCCAA+AGG | 0.657641 | 1_2:+63593046 | None:intergenic |
| TTAAAGGTAGAAAGATGCCA+GGG | 0.664670 | 1_2:-63591189 | Msa0084250:CDS |
| GAAGATGAAGATAGTGAGGG+CGG | 0.674571 | 1_2:+63594307 | None:intergenic |
| TCCAGCAAGAAATTTGATGT+GGG | 0.677547 | 1_2:-63591113 | Msa0084250:CDS |
| AAGAAGTATGGATTTCATGG+AGG | 0.684184 | 1_2:-63591421 | Msa0084250:CDS |
| TCGTCTTCGACAATTCCCCG+TGG | 0.748259 | 1_2:-63593232 | Msa0084250:CDS |
| ACTGCTCATTGGGATAAATG+GGG | 0.750912 | 1_2:-63593090 | Msa0084250:CDS |
| ATCGCGGCAGTGGTACCACG+GGG | 0.756582 | 1_2:+63593217 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATATAAATTGGTAATT+TGG | - | chr1_2:63590372-63590391 | Msa0084250:three_prime_UTR | 10.0% |
| !! | TTTATTAAATTTGTATTTGT+AGG | - | chr1_2:63592541-63592560 | Msa0084250:intron | 10.0% |
| !! | TTCAAATATTCATAATCTTA+AGG | - | chr1_2:63590592-63590611 | Msa0084250:intron | 15.0% |
| !! | TCTTAATTCATATGAAAATT+AGG | - | chr1_2:63590668-63590687 | Msa0084250:intron | 15.0% |
| !! | ATAATAAGTAGATAAACTTA+AGG | + | chr1_2:63590819-63590838 | None:intergenic | 15.0% |
| !! | ACTTTATGAATATTTCAAAA+AGG | + | chr1_2:63590905-63590924 | None:intergenic | 15.0% |
| !!! | TTTGAAATATTCATAAAGTT+AGG | - | chr1_2:63590906-63590925 | Msa0084250:intron | 15.0% |
| !! | TTGAAATATTCATAAAGTTA+GGG | - | chr1_2:63590907-63590926 | Msa0084250:intron | 15.0% |
| !!! | TTTGAAATATTCATAATCTT+AGG | - | chr1_2:63591105-63591124 | Msa0084250:CDS | 15.0% |
| !! | TTGAAATATTCATAATCTTA+GGG | - | chr1_2:63591106-63591125 | Msa0084250:CDS | 15.0% |
| !! | AATGTTTATAATGAATAATG+CGG | + | chr1_2:63591682-63591701 | None:intergenic | 15.0% |
| !! | GTTTATAATGAGTTATTAAA+TGG | - | chr1_2:63591989-63592008 | Msa0084250:intron | 15.0% |
| !! | GACAGAAATTATTATTTATA+TGG | + | chr1_2:63592383-63592402 | None:intergenic | 15.0% |
| !! | TTGATTACATTAGTTATATT+AGG | - | chr1_2:63592610-63592629 | Msa0084250:intron | 15.0% |
| !! | TTGAACAAAACAATAAATAA+TGG | + | chr1_2:63592731-63592750 | None:intergenic | 15.0% |
| !! | CTACTAAATTAAATACAAAA+TGG | + | chr1_2:63593873-63593892 | None:intergenic | 15.0% |
| !! | TCTGCACAAATTATATAAAT+TGG | - | chr1_2:63590364-63590383 | Msa0084250:three_prime_UTR | 20.0% |
| !!! | TATAAATTGGTAATTTGGTT+AGG | - | chr1_2:63590377-63590396 | Msa0084250:exon | 20.0% |
| !!! | AAAAAATCTAATGTTGCTTA+TGG | + | chr1_2:63590538-63590557 | None:intergenic | 20.0% |
| !! | ATAGTAGGTAGTTAAATATA+GGG | + | chr1_2:63590754-63590773 | None:intergenic | 20.0% |
| !! | ACAGTAAGTTGTTAAAATAA+GGG | + | chr1_2:63590787-63590806 | None:intergenic | 20.0% |
| !! | GAATATTTCAAAAAGATCAT+TGG | + | chr1_2:63591097-63591116 | None:intergenic | 20.0% |
| !! | ATATGAAAATGAAAGCAATT+TGG | - | chr1_2:63591191-63591210 | Msa0084250:CDS | 20.0% |
| !!! | TCTTTTAATTCCACATATAT+AGG | - | chr1_2:63591237-63591256 | Msa0084250:intron | 20.0% |
| !! | TATATATAGAAGACATATCT+AGG | + | chr1_2:63592046-63592065 | None:intergenic | 20.0% |
| !! | ACAAAAAAACAATCATCTTA+GGG | + | chr1_2:63592581-63592600 | None:intergenic | 20.0% |
| !! | TACAAAAAAACAATCATCTT+AGG | + | chr1_2:63592582-63592601 | None:intergenic | 20.0% |
| !!! | AAGATGATTGTTTTTTTGTA+AGG | - | chr1_2:63592582-63592601 | Msa0084250:intron | 20.0% |
| !!! | AGATGATTGTTTTTTTGTAA+GGG | - | chr1_2:63592583-63592602 | Msa0084250:intron | 20.0% |
| !! | TTATTATATCATTAGGATTC+AGG | + | chr1_2:63592680-63592699 | None:intergenic | 20.0% |
| !! | TGTCAACTTATTATATCATT+AGG | + | chr1_2:63592687-63592706 | None:intergenic | 20.0% |
| !! | CAAATTCAATCATGTATTAT+AGG | - | chr1_2:63592705-63592724 | Msa0084250:intron | 20.0% |
| !! | GCAGAAAAATAAACAATAAA+TGG | + | chr1_2:63592945-63592964 | None:intergenic | 20.0% |
| !!! | AAATTATATTTTCTGTTTCC+AGG | - | chr1_2:63593076-63593095 | Msa0084250:CDS | 20.0% |
| !!! | AATTATATTTTCTGTTTCCA+GGG | - | chr1_2:63593077-63593096 | Msa0084250:CDS | 20.0% |
| !! | AAAGAACAGTAAAAAATGTA+TGG | - | chr1_2:63593378-63593397 | Msa0084250:intron | 20.0% |
| !! | AAGAACAGTAAAAAATGTAT+GGG | - | chr1_2:63593379-63593398 | Msa0084250:intron | 20.0% |
| !!! | TTTTGATGTACAAAATTTCT+TGG | + | chr1_2:63593808-63593827 | None:intergenic | 20.0% |
| !! | AAAATTCAAATAACAGAACA+TGG | + | chr1_2:63594207-63594226 | None:intergenic | 20.0% |
| !!! | GTTATTTGAATTTTGAACAT+AGG | - | chr1_2:63594213-63594232 | Msa0084250:intron | 20.0% |
| !!! | CAAATAATTTGGCTTAAAAA+AGG | + | chr1_2:63594399-63594418 | None:intergenic | 20.0% |
| !!! | CTTTTTTAAGCCAAATTATT+TGG | - | chr1_2:63594397-63594416 | Msa0084250:five_prime_UTR | 20.0% |
| !! | TTTTTGCTTCTTCATGATTT+TGG | - | chr1_2:63590332-63590351 | Msa0084250:three_prime_UTR | 25.0% |
| ! | AGTAAAATGTGATTGAATCA+AGG | - | chr1_2:63590564-63590583 | Msa0084250:intron | 25.0% |
| ! | GATAGTAGGTAGTTAAATAT+AGG | + | chr1_2:63590755-63590774 | None:intergenic | 25.0% |
| ! | CAGTAAGTTGTTAAAATAAG+GGG | + | chr1_2:63590786-63590805 | None:intergenic | 25.0% |
| ! | GACAGTAAGTTGTTAAAATA+AGG | + | chr1_2:63590788-63590807 | None:intergenic | 25.0% |
| !!! | TTAACAACTTACTGTCATTT+TGG | - | chr1_2:63590792-63590811 | Msa0084250:intron | 25.0% |
| ! | TGACTACAATTTAAAAGAGA+CGG | - | chr1_2:63590876-63590895 | Msa0084250:intron | 25.0% |
| ! | GGACTAAATTGTTAAAAAAG+TGG | + | chr1_2:63591029-63591048 | None:intergenic | 25.0% |
| ! | AATTCCAATTTCTATCCTTT+GGG | - | chr1_2:63591467-63591486 | Msa0084250:intron | 25.0% |
| ! | ATTATCGTCATACTATGTTA+AGG | + | chr1_2:63591889-63591908 | None:intergenic | 25.0% |
| ! | ACAGTAAAAAAAGCAGAATA+TGG | - | chr1_2:63591933-63591952 | Msa0084250:intron | 25.0% |
| ! | TTGAATTTCACCAATCTAAT+CGG | + | chr1_2:63591968-63591987 | None:intergenic | 25.0% |
| !!! | ATGCTTTGTTTTAGTTAGAT+TGG | - | chr1_2:63592108-63592127 | Msa0084250:intron | 25.0% |
| !! | TATGAAAGTATGTAATACGA+GGG | + | chr1_2:63592353-63592372 | None:intergenic | 25.0% |
| !! | ATATGAAAGTATGTAATACG+AGG | + | chr1_2:63592354-63592373 | None:intergenic | 25.0% |
| ! | ATTTACTTCTAGACAATCAT+TGG | - | chr1_2:63592772-63592791 | Msa0084250:intron | 25.0% |
| !!! | GTTACACGTTTTTTTTTGAA+TGG | - | chr1_2:63593032-63593051 | Msa0084250:CDS | 25.0% |
| ! | AACTAAGAATACTAATCTGA+AGG | + | chr1_2:63593215-63593234 | None:intergenic | 25.0% |
| ! | AACATGTAAAAACAATTACC+TGG | + | chr1_2:63593448-63593467 | None:intergenic | 25.0% |
| ! | CACACATTAATTTATGAACT+TGG | - | chr1_2:63593471-63593490 | Msa0084250:intron | 25.0% |
| ! | TAGCTCAATTATTCATTAAC+TGG | - | chr1_2:63593890-63593909 | Msa0084250:intron | 25.0% |
| !! | GGCAAAAATATTTGAAATCT+CGG | - | chr1_2:63593911-63593930 | Msa0084250:intron | 25.0% |
| ! | CTTTAATCAGTAACCATAAA+TGG | + | chr1_2:63594138-63594157 | None:intergenic | 25.0% |
| !! | ATTTGAATTTTGAACATAGG+TGG | - | chr1_2:63594216-63594235 | Msa0084250:intron | 25.0% |
| ! | CATTTGGAGTAGTTTAGTTT+AGG | - | chr1_2:63590427-63590446 | Msa0084250:CDS | 30.0% |
| TTAGGCTTATCTAGTTAAAG+AGG | - | chr1_2:63590445-63590464 | Msa0084250:CDS | 30.0% | |
| ! | TATCTAGTTAAAGAGGCTTT+TGG | - | chr1_2:63590452-63590471 | Msa0084250:CDS | 30.0% |
| ACTATGTTAAACTCTCAGAT+TGG | - | chr1_2:63590727-63590746 | Msa0084250:intron | 30.0% | |
| ATCCTTCAAAGAATATGCTA+GGG | + | chr1_2:63590851-63590870 | None:intergenic | 30.0% | |
| AATCCTTCAAAGAATATGCT+AGG | + | chr1_2:63590852-63590871 | None:intergenic | 30.0% | |
| AAATTAGTCCCAAACTTTGT+AGG | + | chr1_2:63590949-63590968 | None:intergenic | 30.0% | |
| ! | TACAAAGTTTGGGACTAATT+TGG | - | chr1_2:63590948-63590967 | Msa0084250:intron | 30.0% |
| AGTGAGTGGTTGAAATATAA+TGG | + | chr1_2:63590983-63591002 | None:intergenic | 30.0% | |
| TAAAGTACAAAATTCATCGC+TGG | + | chr1_2:63591157-63591176 | None:intergenic | 30.0% | |
| ACATCTGAACTAAAAAATCG+CGG | + | chr1_2:63591330-63591349 | None:intergenic | 30.0% | |
| GAATTCCAATTTCTATCCTT+TGG | - | chr1_2:63591466-63591485 | Msa0084250:intron | 30.0% | |
| AATCCACATGAAACTCATTA+GGG | + | chr1_2:63591592-63591611 | None:intergenic | 30.0% | |
| TAATCCACATGAAACTCATT+AGG | + | chr1_2:63591593-63591612 | None:intergenic | 30.0% | |
| TTGTGTAGTTGATTGGATTT+CGG | + | chr1_2:63591711-63591730 | None:intergenic | 30.0% | |
| CGAAAATTTGTGTAGTTGAT+TGG | + | chr1_2:63591718-63591737 | None:intergenic | 30.0% | |
| GATTGCATAGATACAAATTC+TGG | - | chr1_2:63591836-63591855 | Msa0084250:intron | 30.0% | |
| CATAGTATGACGATAATATC+TGG | - | chr1_2:63591892-63591911 | Msa0084250:intron | 30.0% | |
| ACGATAATATCTGGTTAGAT+TGG | - | chr1_2:63591901-63591920 | Msa0084250:intron | 30.0% | |
| !!! | TGTTTTAGTTAGATTGGTTG+TGG | - | chr1_2:63592114-63592133 | Msa0084250:intron | 30.0% |
| TACATGTTTATGCTTGTATG+TGG | - | chr1_2:63592426-63592445 | Msa0084250:intron | 30.0% | |
| CGTTTGTTTATTGACATGAT+TGG | - | chr1_2:63592499-63592518 | Msa0084250:intron | 30.0% | |
| TTGTCATTCATGTATGATTG+CGG | - | chr1_2:63592977-63592996 | Msa0084250:intron | 30.0% | |
| AAAAAAACGTGTAACTGACA+AGG | + | chr1_2:63593027-63593046 | None:intergenic | 30.0% | |
| ! | ATGAAGAAGTATGGATTTCA+TGG | - | chr1_2:63593104-63593123 | Msa0084250:CDS | 30.0% |
| ATTTATGTTTCTCACTGTTC+AGG | - | chr1_2:63593313-63593332 | Msa0084250:intron | 30.0% | |
| !! | AATCACTTGATTTGTGTATG+AGG | + | chr1_2:63593526-63593545 | None:intergenic | 30.0% |
| GGATGAATCAATCATATTCA+TGG | - | chr1_2:63593577-63593596 | Msa0084250:intron | 30.0% | |
| !! | GGGTAAGTAAAGTTTTAACA+TGG | + | chr1_2:63593613-63593632 | None:intergenic | 30.0% |
| TAATATCATCAAGAGAACGA+CGG | - | chr1_2:63593837-63593856 | Msa0084250:intron | 30.0% | |
| TTGAAATCTCGGATTTATCA+CGG | - | chr1_2:63593922-63593941 | Msa0084250:intron | 30.0% | |
| AATGCTTATTCCTCTTTGTA+TGG | - | chr1_2:63593945-63593964 | Msa0084250:intron | 30.0% | |
| TTCAGATGATATGAAACCTT+TGG | - | chr1_2:63594089-63594108 | Msa0084250:intron | 30.0% | |
| TAAAGAGATAGTTCCACAAA+TGG | - | chr1_2:63594153-63594172 | Msa0084250:intron | 30.0% | |
| AAAGAGATAGTTCCACAAAT+GGG | - | chr1_2:63594154-63594173 | Msa0084250:intron | 30.0% | |
| !! | CTAGTTGTTATTTGTGACTT+AGG | - | chr1_2:63594287-63594306 | Msa0084250:five_prime_UTR | 30.0% |
| !! | TTGTTATTTGTGACTTAGGA+TGG | - | chr1_2:63594291-63594310 | Msa0084250:five_prime_UTR | 30.0% |
| ! | TGTTATTTGTGACTTAGGAT+GGG | - | chr1_2:63594292-63594311 | Msa0084250:five_prime_UTR | 30.0% |
| GGCTTAAAAAAGGAAACAAT+TGG | + | chr1_2:63594389-63594408 | None:intergenic | 30.0% | |
| ! | ATGGACAAAAGGGTATAGTA+GGG | + | chr1_2:63590177-63590196 | None:intergenic | 35.0% |
| ! | TATACCCTTTTGTCCATCTA+GGG | - | chr1_2:63590180-63590199 | Msa0084250:three_prime_UTR | 35.0% |
| AAAACCCTAGATGGACAAAA+GGG | + | chr1_2:63590187-63590206 | None:intergenic | 35.0% | |
| !! | TTTTGTCCATCTAGGGTTTT+GGG | - | chr1_2:63590187-63590206 | Msa0084250:intron | 35.0% |
| GATGAAGATGAAGATAGTGA+GGG | + | chr1_2:63590227-63590246 | None:intergenic | 35.0% | |
| AGATGAAGATGAAGATAGTG+AGG | + | chr1_2:63590228-63590247 | None:intergenic | 35.0% | |
| AGTTACAAGCAAATCAATCG+AGG | + | chr1_2:63590304-63590323 | None:intergenic | 35.0% | |
| !! | TGAGTTTGTTATCCTGCATT+TGG | - | chr1_2:63590411-63590430 | Msa0084250:CDS | 35.0% |
| AACTAAACTACTCCAAATGC+AGG | + | chr1_2:63590426-63590445 | None:intergenic | 35.0% | |
| !! | AACATAGTCAAGGACTAGTT+TGG | + | chr1_2:63590715-63590734 | None:intergenic | 35.0% |
| CTGAGAGTTTAACATAGTCA+AGG | + | chr1_2:63590725-63590744 | None:intergenic | 35.0% | |
| ! | AAAGTTTGGGACTAATTTGG+TGG | - | chr1_2:63590951-63590970 | Msa0084250:intron | 35.0% |
| TCAACCACTCACTATCAATT+TGG | - | chr1_2:63590990-63591009 | Msa0084250:intron | 35.0% | |
| CATGGCAAAACCTATATATG+TGG | + | chr1_2:63591250-63591269 | None:intergenic | 35.0% | |
| ! | ATATATAGGTTTTGCCATGC+TGG | - | chr1_2:63591251-63591270 | Msa0084250:intron | 35.0% |
| !!! | GCGATTTTTTAGTTCAGATG+TGG | - | chr1_2:63591329-63591348 | Msa0084250:intron | 35.0% |
| ACACCAAATTCACAAAGAAC+TGG | - | chr1_2:63591390-63591409 | Msa0084250:CDS | 35.0% | |
| ACACCAGTTCTTTGTGAATT+TGG | + | chr1_2:63591396-63591415 | None:intergenic | 35.0% | |
| ! | GGTGTTATAGCTGTAAAATG+TGG | - | chr1_2:63591411-63591430 | Msa0084250:CDS | 35.0% |
| TCTACCCAAAGGATAGAAAT+TGG | + | chr1_2:63591474-63591493 | None:intergenic | 35.0% | |
| TATCCCTAATGAGTTTCATG+TGG | - | chr1_2:63591586-63591605 | Msa0084250:intron | 35.0% | |
| TGCGGAGTAACTAAACTAAA+AGG | + | chr1_2:63591664-63591683 | None:intergenic | 35.0% | |
| ACATTAAGTGATGTACCAAC+AGG | + | chr1_2:63592252-63592271 | None:intergenic | 35.0% | |
| TGCTATTATATAGACACGTG+CGG | + | chr1_2:63592454-63592473 | None:intergenic | 35.0% | |
| GAGTGGCAACTTATTGTTAT+TGG | + | chr1_2:63592649-63592668 | None:intergenic | 35.0% | |
| ! | TTTTTGAATGGCAGTTACAC+AGG | - | chr1_2:63593044-63593063 | Msa0084250:CDS | 35.0% |
| ! | AAGAAGTATGGATTTCATGG+AGG | - | chr1_2:63593107-63593126 | Msa0084250:CDS | 35.0% |
| TTTAAAGGTAGAAAGATGCC+AGG | - | chr1_2:63593338-63593357 | Msa0084250:intron | 35.0% | |
| TTAAAGGTAGAAAGATGCCA+GGG | - | chr1_2:63593339-63593358 | Msa0084250:intron | 35.0% | |
| ATCCAGCAAGAAATTTGATG+TGG | - | chr1_2:63593414-63593433 | Msa0084250:intron | 35.0% | |
| TCCAGCAAGAAATTTGATGT+GGG | - | chr1_2:63593415-63593434 | Msa0084250:intron | 35.0% | |
| AGAAATTTGATGTGGGTGAA+AGG | - | chr1_2:63593422-63593441 | Msa0084250:intron | 35.0% | |
| ATTTATGAACTTGGAGCTCT+AGG | - | chr1_2:63593480-63593499 | Msa0084250:intron | 35.0% | |
| TTTATGAACTTGGAGCTCTA+GGG | - | chr1_2:63593481-63593500 | Msa0084250:intron | 35.0% | |
| !! | GGTTGATGAGTTTGAGTTAA+AGG | - | chr1_2:63593556-63593575 | Msa0084250:intron | 35.0% |
| TAATCCGGAGTTCAATCAAA+GGG | + | chr1_2:63593633-63593652 | None:intergenic | 35.0% | |
| TCATTAATGACCAAGTGTCT+TGG | + | chr1_2:63593703-63593722 | None:intergenic | 35.0% | |
| ! | AAAGGAAGTATAGATGTGTC+AGG | + | chr1_2:63594039-63594058 | None:intergenic | 35.0% |
| TCATCTGAATCTTCATCTTC+CGG | + | chr1_2:63594078-63594097 | None:intergenic | 35.0% | |
| AACTAGAACTTATCGAGTGA+AGG | + | chr1_2:63594273-63594292 | None:intergenic | 35.0% | |
| GTTATTTGTGACTTAGGATG+GGG | - | chr1_2:63594293-63594312 | Msa0084250:five_prime_UTR | 35.0% | |
| TTATTTGTGACTTAGGATGG+GGG | - | chr1_2:63594294-63594313 | Msa0084250:five_prime_UTR | 35.0% | |
| AAGGTCAGTGCCAAATAATT+TGG | + | chr1_2:63594410-63594429 | None:intergenic | 35.0% | |
| ATTGCTCTCGATACCCATTT+CGG | + | chr1_2:63590127-63590146 | None:intergenic | 40.0% | |
| ! | AAAAGGGTATAGTAGGGTGT+TGG | + | chr1_2:63590171-63590190 | None:intergenic | 40.0% |
| ! | GATGGACAAAAGGGTATAGT+AGG | + | chr1_2:63590178-63590197 | None:intergenic | 40.0% |
| ! | CTATACCCTTTTGTCCATCT+AGG | - | chr1_2:63590179-63590198 | Msa0084250:three_prime_UTR | 40.0% |
| CAAAACCCTAGATGGACAAA+AGG | + | chr1_2:63590188-63590207 | None:intergenic | 40.0% | |
| !! | CTTTTGTCCATCTAGGGTTT+TGG | - | chr1_2:63590186-63590205 | Msa0084250:intron | 40.0% |
| AATGAACCCAAAACCCTAGA+TGG | + | chr1_2:63590196-63590215 | None:intergenic | 40.0% | |
| TTCAACTAAGACCTTTGCAG+TGG | - | chr1_2:63590475-63590494 | Msa0084250:CDS | 40.0% | |
| !! | ATAGTCAAGGACTAGTTTGG+TGG | + | chr1_2:63590712-63590731 | None:intergenic | 40.0% |
| ! | AAGGGGACTGAATTGATAGT+AGG | + | chr1_2:63590769-63590788 | None:intergenic | 40.0% |
| GTCCCTAGCATATTCTTTGA+AGG | - | chr1_2:63590846-63590865 | Msa0084250:intron | 40.0% | |
| TTTGTAGGTCGCTCTCAAAT+AGG | + | chr1_2:63590934-63590953 | None:intergenic | 40.0% | |
| !! | GAGACCAAATTGATAGTGAG+TGG | + | chr1_2:63590997-63591016 | None:intergenic | 40.0% |
| !! | AATTCATCGCTGGCTTTGTA+GGG | + | chr1_2:63591147-63591166 | None:intergenic | 40.0% |
| !! | AAATTCATCGCTGGCTTTGT+AGG | + | chr1_2:63591148-63591167 | None:intergenic | 40.0% |
| GTTCAGATGTGGAGACTATA+AGG | - | chr1_2:63591340-63591359 | Msa0084250:intron | 40.0% | |
| !! | GAATTTGGTGTCATCACACT+AGG | + | chr1_2:63591381-63591400 | None:intergenic | 40.0% |
| AATGTGGAATGACTGCTCAT+TGG | - | chr1_2:63591427-63591446 | Msa0084250:CDS | 40.0% | |
| ATGTGGAATGACTGCTCATT+GGG | - | chr1_2:63591428-63591447 | Msa0084250:CDS | 40.0% | |
| TGACTGCTCATTGGGATAAA+TGG | - | chr1_2:63591436-63591455 | Msa0084250:intron | 40.0% | |
| GACTGCTCATTGGGATAAAT+GGG | - | chr1_2:63591437-63591456 | Msa0084250:intron | 40.0% | |
| ACTGCTCATTGGGATAAATG+GGG | - | chr1_2:63591438-63591457 | Msa0084250:intron | 40.0% | |
| CAATGTTGTCATCTACCCAA+AGG | + | chr1_2:63591485-63591504 | None:intergenic | 40.0% | |
| AGATGACAACATTGTCTCTC+AGG | - | chr1_2:63591491-63591510 | Msa0084250:intron | 40.0% | |
| GTGACAGTATCCGATTAGAT+TGG | - | chr1_2:63591955-63591974 | Msa0084250:intron | 40.0% | |
| ATTCAGCTTAGAGTTACTCC+TGG | - | chr1_2:63592016-63592035 | Msa0084250:intron | 40.0% | |
| AAGACATATCTAGGTACTCC+AGG | + | chr1_2:63592037-63592056 | None:intergenic | 40.0% | |
| TCTTGAAGCTTCCTCTTCAT+CGG | + | chr1_2:63592201-63592220 | None:intergenic | 40.0% | |
| !! | AATGTTCGCCATTTTGTTCC+CGG | - | chr1_2:63592267-63592286 | Msa0084250:CDS | 40.0% |
| ACAGGAATCACCAAAGGAAA+AGG | - | chr1_2:63592306-63592325 | Msa0084250:CDS | 40.0% | |
| ! | CACCAAAGGAAAAGGTTTTC+AGG | - | chr1_2:63592314-63592333 | Msa0084250:CDS | 40.0% |
| ! | CACCTGAAAACCTTTTCCTT+TGG | + | chr1_2:63592319-63592338 | None:intergenic | 40.0% |
| GCTATTATATAGACACGTGC+GGG | + | chr1_2:63592453-63592472 | None:intergenic | 40.0% | |
| !! | TAGCAGTTGAGTTGAATGCA+TGG | - | chr1_2:63592469-63592488 | Msa0084250:intron | 40.0% |
| AATCTTGCACGTACAAGTTC+AGG | - | chr1_2:63592822-63592841 | Msa0084250:intron | 40.0% | |
| TTCAAATTTCCAGAGAGGTC+AGG | + | chr1_2:63592887-63592906 | None:intergenic | 40.0% | |
| TGCGTTTCAAATTTCCAGAG+AGG | + | chr1_2:63592892-63592911 | None:intergenic | 40.0% | |
| ! | AACGCAAAATGTTGAGTTGC+AGG | - | chr1_2:63592906-63592925 | Msa0084250:intron | 40.0% |
| CATACTTCTTCATTACACCC+TGG | + | chr1_2:63593097-63593116 | None:intergenic | 40.0% | |
| CAGGGTGTAATGAAGAAGTA+TGG | - | chr1_2:63593095-63593114 | Msa0084250:CDS | 40.0% | |
| ATGTGCTTTCGAATTCCCAT+GGG | + | chr1_2:63593141-63593160 | None:intergenic | 40.0% | |
| TATGTGCTTTCGAATTCCCA+TGG | + | chr1_2:63593142-63593161 | None:intergenic | 40.0% | |
| ! | TTCGAAAGCACATAGAACCA+TGG | - | chr1_2:63593148-63593167 | Msa0084250:CDS | 40.0% |
| ! | TCGAAAGCACATAGAACCAT+GGG | - | chr1_2:63593149-63593168 | Msa0084250:CDS | 40.0% |
| AAGTATTCCTGTAGATCCCA+TGG | + | chr1_2:63593168-63593187 | None:intergenic | 40.0% | |
| ATGGGATCTACAGGAATACT+TGG | - | chr1_2:63593167-63593186 | Msa0084250:CDS | 40.0% | |
| AGGAATACTTGGTCCTTGTA+AGG | - | chr1_2:63593178-63593197 | Msa0084250:CDS | 40.0% | |
| ATACTTGGTCCTTGTAAGGT+TGG | - | chr1_2:63593182-63593201 | Msa0084250:CDS | 40.0% | |
| CTCACTGTTCAGGTCTTTAA+AGG | - | chr1_2:63593323-63593342 | Msa0084250:intron | 40.0% | |
| ACCCACATCAAATTTCTTGC+TGG | + | chr1_2:63593419-63593438 | None:intergenic | 40.0% | |
| ! | TTATGAACTTGGAGCTCTAG+GGG | - | chr1_2:63593482-63593501 | Msa0084250:intron | 40.0% |
| CTTACCCTTTGATTGAACTC+CGG | - | chr1_2:63593626-63593645 | Msa0084250:intron | 40.0% | |
| GTAATCCGGAGTTCAATCAA+AGG | + | chr1_2:63593634-63593653 | None:intergenic | 40.0% | |
| TGATTGAACTCCGGATTACT+AGG | - | chr1_2:63593635-63593654 | Msa0084250:intron | 40.0% | |
| GATTGAACTCCGGATTACTA+GGG | - | chr1_2:63593636-63593655 | Msa0084250:intron | 40.0% | |
| ! | CCAAGTGTCTTGGTTGATAT+TGG | + | chr1_2:63593693-63593712 | None:intergenic | 40.0% |
| CCAATATCAACCAAGACACT+TGG | - | chr1_2:63593690-63593709 | Msa0084250:intron | 40.0% | |
| ACTGCAAATGTGCAAATGGT+GGG | + | chr1_2:63593751-63593770 | None:intergenic | 40.0% | |
| AACTGCAAATGTGCAAATGG+TGG | + | chr1_2:63593752-63593771 | None:intergenic | 40.0% | |
| CCATTTGCACATTTGCAGTT+CGG | - | chr1_2:63593752-63593771 | Msa0084250:intron | 40.0% | |
| TTTCCCAACTTACTTTGTGC+CGG | - | chr1_2:63594056-63594075 | Msa0084250:intron | 40.0% | |
| AAACCTTTGGTTGCTGATCT+TGG | - | chr1_2:63594102-63594121 | Msa0084250:intron | 40.0% | |
| AACCTTTGGTTGCTGATCTT+GGG | - | chr1_2:63594103-63594122 | Msa0084250:intron | 40.0% | |
| CTTGCACAAAAACCCATTTG+TGG | + | chr1_2:63594169-63594188 | None:intergenic | 40.0% | |
| !! | CACAAATGGGTTTTTGTGCA+AGG | - | chr1_2:63594167-63594186 | Msa0084250:intron | 40.0% |
| TATTTGTGACTTAGGATGGG+GGG | - | chr1_2:63594295-63594314 | Msa0084250:five_prime_UTR | 40.0% | |
| CCAAGTCTACACTTATTTGC+AGG | + | chr1_2:63594342-63594361 | None:intergenic | 40.0% | |
| CCTGCAAATAAGTGTAGACT+TGG | - | chr1_2:63594339-63594358 | Msa0084250:five_prime_UTR | 40.0% | |
| GAAGATGAAGATAGTGAGGG+CGG | + | chr1_2:63590224-63590243 | None:intergenic | 45.0% | |
| TCATCTTCGCATCTCAACTC+AGG | - | chr1_2:63590248-63590267 | Msa0084250:intron | 45.0% | |
| GAGGCAGAATAGAAAGAGCA+TGG | + | chr1_2:63590285-63590304 | None:intergenic | 45.0% | |
| TGAGAGCGACCTACAAAGTT+TGG | - | chr1_2:63590937-63590956 | Msa0084250:intron | 45.0% | |
| GAGAGCGACCTACAAAGTTT+GGG | - | chr1_2:63590938-63590957 | Msa0084250:intron | 45.0% | |
| ! | TTCAGTCCTTCTGAGAGTCA+AGG | + | chr1_2:63591054-63591073 | None:intergenic | 45.0% |
| ! | TTTGTAGGGCGCTCTCAAAT+AGG | + | chr1_2:63591133-63591152 | None:intergenic | 45.0% |
| GAACTAAAAAATCGCGGCAG+TGG | + | chr1_2:63591324-63591343 | None:intergenic | 45.0% | |
| TCAGGTCAAAACTCCTGAGA+AGG | - | chr1_2:63591509-63591528 | Msa0084250:intron | 45.0% | |
| GTCAAAACTCCTGAGAAGGA+AGG | - | chr1_2:63591513-63591532 | Msa0084250:intron | 45.0% | |
| GAACAATAGCCTTCCTTCTC+AGG | + | chr1_2:63591525-63591544 | None:intergenic | 45.0% | |
| ! | GATTGGTTGTGGACAGAAGA+AGG | - | chr1_2:63592125-63592144 | Msa0084250:intron | 45.0% |
| ACACTTGACAAAGCCTGAAG+TGG | - | chr1_2:63592152-63592171 | Msa0084250:intron | 45.0% | |
| CACTTGACAAAGCCTGAAGT+GGG | - | chr1_2:63592153-63592172 | Msa0084250:intron | 45.0% | |
| !! | AGCCTGAAGTGGGTCATTTT+AGG | - | chr1_2:63592163-63592182 | Msa0084250:intron | 45.0% |
| !! | GCCTGAAGTGGGTCATTTTA+GGG | - | chr1_2:63592164-63592183 | Msa0084250:intron | 45.0% |
| ! | TCAAGAGTTTCGAGTGACAG+AGG | - | chr1_2:63592215-63592234 | Msa0084250:CDS | 45.0% |
| !! | ATGTTCGCCATTTTGTTCCC+GGG | - | chr1_2:63592268-63592287 | Msa0084250:CDS | 45.0% |
| TGTGATGTCAACATACTGCC+CGG | + | chr1_2:63592289-63592308 | None:intergenic | 45.0% | |
| GACATCACAGGAATCACCAA+AGG | - | chr1_2:63592300-63592319 | Msa0084250:CDS | 45.0% | |
| GCACGTACAAGTTCAGGTAA+TGG | - | chr1_2:63592828-63592847 | Msa0084250:intron | 45.0% | |
| CCAGAGAGGTCAGGTAAAAT+GGG | + | chr1_2:63592878-63592897 | None:intergenic | 45.0% | |
| TCCAGAGAGGTCAGGTAAAA+TGG | + | chr1_2:63592879-63592898 | None:intergenic | 45.0% | |
| ! | TGTTGAGTTGCAGGCTTTCT+AGG | - | chr1_2:63592915-63592934 | Msa0084250:intron | 45.0% |
| ! | GTTGAGTTGCAGGCTTTCTA+GGG | - | chr1_2:63592916-63592935 | Msa0084250:intron | 45.0% |
| ! | TTGAGTTGCAGGCTTTCTAG+GGG | - | chr1_2:63592917-63592936 | Msa0084250:intron | 45.0% |
| CATAGAACCATGGGATCTAC+AGG | - | chr1_2:63593158-63593177 | Msa0084250:CDS | 45.0% | |
| TTGGTCCTTGTAAGGTTGGA+TGG | - | chr1_2:63593186-63593205 | Msa0084250:CDS | 45.0% | |
| TAGAAAGATGCCAGGGAGAA+TGG | - | chr1_2:63593346-63593365 | Msa0084250:intron | 45.0% | |
| AGAAAGATGCCAGGGAGAAT+GGG | - | chr1_2:63593347-63593366 | Msa0084250:intron | 45.0% | |
| ATCAAGTGATTGAGCTCGAG+CGG | - | chr1_2:63593535-63593554 | Msa0084250:intron | 45.0% | |
| ! | TTACTAGGGCTCCTTCCTTT+TGG | - | chr1_2:63593650-63593669 | Msa0084250:intron | 45.0% |
| ! | TACTAGGGCTCCTTCCTTTT+GGG | - | chr1_2:63593651-63593670 | Msa0084250:intron | 45.0% |
| !! | TGATATTGGCCTTGACTCTC+CGG | + | chr1_2:63593679-63593698 | None:intergenic | 45.0% |
| CCGAACTGCAAATGTGCAAA+TGG | + | chr1_2:63593755-63593774 | None:intergenic | 45.0% | |
| TATCATCAAGAGAACGACGG+TGG | - | chr1_2:63593840-63593859 | Msa0084250:intron | 45.0% | |
| GTTGTGCACACCATACAAAG+AGG | + | chr1_2:63593958-63593977 | None:intergenic | 45.0% | |
| TTGTATGGTGTGCACAACAC+AGG | - | chr1_2:63593960-63593979 | Msa0084250:intron | 45.0% | |
| ! | GGCACAAAGTAAGTTGGGAA+AGG | + | chr1_2:63594057-63594076 | None:intergenic | 45.0% |
| CTTCCGGCACAAAGTAAGTT+GGG | + | chr1_2:63594062-63594081 | None:intergenic | 45.0% | |
| TCTTCCGGCACAAAGTAAGT+TGG | + | chr1_2:63594063-63594082 | None:intergenic | 45.0% | |
| ACCTTTGGTTGCTGATCTTG+GGG | - | chr1_2:63594104-63594123 | Msa0084250:intron | 45.0% | |
| TGGGGATGTGGATCCATTTA+TGG | - | chr1_2:63594122-63594141 | Msa0084250:intron | 45.0% | |
| CTCTCGATACCCATTTCGGT+GGG | + | chr1_2:63590123-63590142 | None:intergenic | 50.0% | |
| TTTGCAGCATGCCACTGCAA+AGG | + | chr1_2:63590489-63590508 | None:intergenic | 50.0% | |
| !! | GAGAGCGCTCTACAAAGTCA+GGG | - | chr1_2:63590623-63590642 | Msa0084250:intron | 50.0% |
| ! | GTCCTTCTGAGAGTCAAGGA+GGG | + | chr1_2:63591050-63591069 | None:intergenic | 50.0% |
| ! | AGTCCTTCTGAGAGTCAAGG+AGG | + | chr1_2:63591051-63591070 | None:intergenic | 50.0% |
| ACCTCTTGAAAACGCCAGCA+TGG | + | chr1_2:63591268-63591287 | None:intergenic | 50.0% | |
| GGAAGGCTATTGTTCTCTCC+AGG | - | chr1_2:63591530-63591549 | Msa0084250:intron | 50.0% | |
| AGAATGAAGCAGAACGCACC+TGG | + | chr1_2:63591551-63591570 | None:intergenic | 50.0% | |
| GTGCGTTCTGCTTCATTCTC+AGG | - | chr1_2:63591552-63591571 | Msa0084250:intron | 50.0% | |
| GCCCTAAAATGACCCACTTC+AGG | + | chr1_2:63592168-63592187 | None:intergenic | 50.0% | |
| !!! | GTGGGTCATTTTAGGGCTCA+AGG | - | chr1_2:63592171-63592190 | Msa0084250:intron | 50.0% |
| CTCAAGGAGTTCCGATGAAG+AGG | - | chr1_2:63592187-63592206 | Msa0084250:intron | 50.0% | |
| GAGGATGCACTTCTTCCTGT+TGG | - | chr1_2:63592234-63592253 | Msa0084250:CDS | 50.0% | |
| CATACTGCCCGGGAACAAAA+TGG | + | chr1_2:63592278-63592297 | None:intergenic | 50.0% | |
| GTGATGTCAACATACTGCCC+GGG | + | chr1_2:63592288-63592307 | None:intergenic | 50.0% | |
| GGGCAGTATGTTGACATCAC+AGG | - | chr1_2:63592288-63592307 | Msa0084250:CDS | 50.0% | |
| ! | GGATTCAGGACTCTGAAGAG+TGG | + | chr1_2:63592666-63592685 | None:intergenic | 50.0% |
| ! | CCCATTTTACCTGACCTCTC+TGG | - | chr1_2:63592875-63592894 | Msa0084250:intron | 50.0% |
| TGAGTTGCAGGCTTTCTAGG+GGG | - | chr1_2:63592918-63592937 | Msa0084250:intron | 50.0% | |
| ATGGAGGTTCAGCATCCCAT+GGG | - | chr1_2:63593123-63593142 | Msa0084250:CDS | 50.0% | |
| GGACTCCATCCAACCTTACA+AGG | + | chr1_2:63593194-63593213 | None:intergenic | 50.0% | |
| TTTGATGTGGGTGAAAGGCC+AGG | - | chr1_2:63593427-63593446 | Msa0084250:intron | 50.0% | |
| AGGAAGGAGCCCTAGTAATC+CGG | + | chr1_2:63593648-63593667 | None:intergenic | 50.0% | |
| TTGACTCTCCGGTTCCCAAA+AGG | + | chr1_2:63593668-63593687 | None:intergenic | 50.0% | |
| !! | TTTTGGGAACCGGAGAGTCA+AGG | - | chr1_2:63593667-63593686 | Msa0084250:intron | 50.0% |
| CAAAGTTCCCTGTAGCTCCT+GGG | + | chr1_2:63593987-63594006 | None:intergenic | 50.0% | |
| ACAAAGTTCCCTGTAGCTCC+TGG | + | chr1_2:63593988-63594007 | None:intergenic | 50.0% | |
| TCCCCAAGATCAGCAACCAA+AGG | + | chr1_2:63594108-63594127 | None:intergenic | 50.0% | |
| GCTCTCGATACCCATTTCGG+TGG | + | chr1_2:63590124-63590143 | None:intergenic | 55.0% | |
| GCAGTGGCATGCTGCAAATG+TGG | - | chr1_2:63590491-63590510 | Msa0084250:CDS | 55.0% | |
| !! | CGAGAGCGCTCTACAAAGTC+AGG | - | chr1_2:63590622-63590641 | Msa0084250:intron | 55.0% |
| GTCCCTCCTTGACTCTCAGA+AGG | - | chr1_2:63591045-63591064 | Msa0084250:intron | 55.0% | |
| !! | GCCATGCTGGCGTTTTCAAG+AGG | - | chr1_2:63591264-63591283 | Msa0084250:intron | 55.0% |
| !! | GCTGGCGTTTTCAAGAGGTG+TGG | - | chr1_2:63591269-63591288 | Msa0084250:intron | 55.0% |
| TCGTCTTCGACAATTCCCCG+TGG | - | chr1_2:63591296-63591315 | Msa0084250:intron | 55.0% | |
| AAATCGCGGCAGTGGTACCA+CGG | + | chr1_2:63591316-63591335 | None:intergenic | 55.0% | |
| ! | GAGTTGCAGGCTTTCTAGGG+GGG | - | chr1_2:63592919-63592938 | Msa0084250:intron | 55.0% |
| CATGGAGGTTCAGCATCCCA+TGG | - | chr1_2:63593122-63593141 | Msa0084250:CDS | 55.0% | |
| AAGATGCCAGGGAGAATGGG+TGG | - | chr1_2:63593350-63593369 | Msa0084250:intron | 55.0% | |
| AGATGCCAGGGAGAATGGGT+GGG | - | chr1_2:63593351-63593370 | Msa0084250:intron | 55.0% | |
| !! | GGCTCCTTCCTTTTGGGAAC+CGG | - | chr1_2:63593657-63593676 | Msa0084250:intron | 55.0% |
| CTCTCCGGTTCCCAAAAGGA+AGG | + | chr1_2:63593664-63593683 | None:intergenic | 55.0% | |
| GGTTGCTGATCTTGGGGATG+TGG | - | chr1_2:63594110-63594129 | Msa0084250:intron | 55.0% | |
| GACTTAGGATGGGGGGAACA+TGG | - | chr1_2:63594302-63594321 | Msa0084250:five_prime_UTR | 55.0% | |
| AATCGCGGCAGTGGTACCAC+GGG | + | chr1_2:63591315-63591334 | None:intergenic | 60.0% | |
| TGCTTCCCACCCATTCTCCC+TGG | + | chr1_2:63593359-63593378 | None:intergenic | 60.0% | |
| GTGTGCACAACACAGGTCCC+AGG | - | chr1_2:63593967-63593986 | Msa0084250:intron | 60.0% | |
| ACACAGGTCCCAGGAGCTAC+AGG | - | chr1_2:63593976-63593995 | Msa0084250:intron | 60.0% | |
| CACAGGTCCCAGGAGCTACA+GGG | - | chr1_2:63593977-63593996 | Msa0084250:intron | 60.0% | |
| ATCGCGGCAGTGGTACCACG+GGG | + | chr1_2:63591314-63591333 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 63590118 | 63594432 | 63590118 | ID=Msa0084250;Name=Msa0084250 |
| chr1_2 | mRNA | 63590118 | 63594432 | 63590118 | ID=Msa0084250-mRNA-1;Parent=Msa0084250;Name=Msa0084250-mRNA-1;_AED=0.16;_eAED=0.16;_QI=160|1|1|1|0.66|0.42|7|226|294 |
| chr1_2 | exon | 63590118 | 63590199 | 63590118 | ID=Msa0084250-mRNA-1:exon:21357;Parent=Msa0084250-mRNA-1 |
| chr1_2 | exon | 63590251 | 63590568 | 63590251 | ID=Msa0084250-mRNA-1:exon:21356;Parent=Msa0084250-mRNA-1 |
| chr1_2 | exon | 63591102 | 63591215 | 63591102 | ID=Msa0084250-mRNA-1:exon:21355;Parent=Msa0084250-mRNA-1 |
| chr1_2 | exon | 63591351 | 63591452 | 63591351 | ID=Msa0084250-mRNA-1:exon:21354;Parent=Msa0084250-mRNA-1 |
| chr1_2 | exon | 63592215 | 63592424 | 63592215 | ID=Msa0084250-mRNA-1:exon:21353;Parent=Msa0084250-mRNA-1 |
| chr1_2 | exon | 63592999 | 63593291 | 63592999 | ID=Msa0084250-mRNA-1:exon:21352;Parent=Msa0084250-mRNA-1 |
| chr1_2 | exon | 63594281 | 63594432 | 63594281 | ID=Msa0084250-mRNA-1:exon:21351;Parent=Msa0084250-mRNA-1 |
| chr1_2 | five_prime_UTR | 63594281 | 63594432 | 63594281 | ID=Msa0084250-mRNA-1:five_prime_utr;Parent=Msa0084250-mRNA-1 |
| chr1_2 | five_prime_UTR | 63593284 | 63593291 | 63593284 | ID=Msa0084250-mRNA-1:five_prime_utr;Parent=Msa0084250-mRNA-1 |
| chr1_2 | CDS | 63592999 | 63593283 | 63592999 | ID=Msa0084250-mRNA-1:cds;Parent=Msa0084250-mRNA-1 |
| chr1_2 | CDS | 63592215 | 63592424 | 63592215 | ID=Msa0084250-mRNA-1:cds;Parent=Msa0084250-mRNA-1 |
| chr1_2 | CDS | 63591351 | 63591452 | 63591351 | ID=Msa0084250-mRNA-1:cds;Parent=Msa0084250-mRNA-1 |
| chr1_2 | CDS | 63591102 | 63591215 | 63591102 | ID=Msa0084250-mRNA-1:cds;Parent=Msa0084250-mRNA-1 |
| chr1_2 | CDS | 63590395 | 63590568 | 63590395 | ID=Msa0084250-mRNA-1:cds;Parent=Msa0084250-mRNA-1 |
| chr1_2 | three_prime_UTR | 63590251 | 63590394 | 63590251 | ID=Msa0084250-mRNA-1:three_prime_utr;Parent=Msa0084250-mRNA-1 |
| chr1_2 | three_prime_UTR | 63590118 | 63590199 | 63590118 | ID=Msa0084250-mRNA-1:three_prime_utr;Parent=Msa0084250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
