Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078870 | XP_003625582.1 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 5.13e-97 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078870 | sp|P49201|RS232_ARATH | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 4.03e-97 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078870 | B7FHD2 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 2.45e-97 | 285 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1078870 | 0.859864 | 3.078990e-63 | -8.615850e-47 |
| Msa0002790 | Msa1078870 | 0.856607 | 2.869529e-62 | -8.615850e-47 |
| Msa0032780 | Msa1078870 | 0.840643 | 7.682756e-58 | -8.615850e-47 |
| Msa0036330 | Msa1078870 | 0.802875 | 4.558751e-49 | -8.615850e-47 |
| Msa0040220 | Msa1078870 | 0.805020 | 1.633182e-49 | -8.615850e-47 |
| Msa0042480 | Msa1078870 | 0.811372 | 7.234381e-51 | -8.615850e-47 |
| Msa0044890 | Msa1078870 | 0.842500 | 2.490248e-58 | -8.615850e-47 |
| Msa0049690 | Msa1078870 | 0.817753 | 2.800458e-52 | -8.615850e-47 |
| Msa0068970 | Msa1078870 | 0.843137 | 1.685781e-58 | -8.615850e-47 |
| Msa0074030 | Msa1078870 | 0.851909 | 6.525955e-61 | -8.615850e-47 |
| Msa0079590 | Msa1078870 | 0.810382 | 1.184916e-50 | -8.615850e-47 |
| Msa0084250 | Msa1078870 | 0.801426 | 9.053095e-49 | -8.615850e-47 |
| Msa0085780 | Msa1078870 | 0.800962 | 1.126883e-48 | -8.615850e-47 |
| Msa0086750 | Msa1078870 | 0.802580 | 5.244126e-49 | -8.615850e-47 |
| Msa0087910 | Msa1078870 | 0.840370 | 9.057851e-58 | -8.615850e-47 |
| Msa0114570 | Msa1078870 | 0.805176 | 1.514807e-49 | -8.615850e-47 |
| Msa0116130 | Msa1078870 | 0.801176 | 1.018839e-48 | -8.615850e-47 |
| Msa0116670 | Msa1078870 | 0.878122 | 3.623990e-69 | -8.615850e-47 |
| Msa0606580 | Msa1078870 | 0.813875 | 2.051159e-51 | -8.615850e-47 |
| Msa0625570 | Msa1078870 | 0.813867 | 2.059040e-51 | -8.615850e-47 |
| Msa0647280 | Msa1078870 | 0.804215 | 2.404139e-49 | -8.615850e-47 |
| Msa0653060 | Msa1078870 | 0.812879 | 3.395460e-51 | -8.615850e-47 |
| Msa0686800 | Msa1078870 | 0.812385 | 4.354066e-51 | -8.615850e-47 |
| Msa0705800 | Msa1078870 | 0.814987 | 1.164343e-51 | -8.615850e-47 |
| Msa0712610 | Msa1078870 | 0.833680 | 4.640756e-56 | -8.615850e-47 |
| Msa0717380 | Msa1078870 | 0.846397 | 2.229128e-59 | -8.615850e-47 |
| Msa0729200 | Msa1078870 | 0.825594 | 4.304697e-54 | -8.615850e-47 |
| Msa0749750 | Msa1078870 | 0.803700 | 3.076328e-49 | -8.615850e-47 |
| Msa0750100 | Msa1078870 | 0.804992 | 1.655118e-49 | -8.615850e-47 |
| Msa0752910 | Msa1078870 | 0.851607 | 7.949399e-61 | -8.615850e-47 |
| Msa0769590 | Msa1078870 | 0.817949 | 2.528526e-52 | -8.615850e-47 |
| Msa0781080 | Msa1078870 | 0.831946 | 1.251310e-55 | -8.615850e-47 |
| Msa0783630 | Msa1078870 | 0.840389 | 8.955432e-58 | -8.615850e-47 |
| Msa0788380 | Msa1078870 | 0.807978 | 3.880893e-50 | -8.615850e-47 |
| Msa0792420 | Msa1078870 | 0.831530 | 1.584419e-55 | -8.615850e-47 |
| Msa0799830 | Msa1078870 | 0.833356 | 5.589385e-56 | -8.615850e-47 |
| Msa0806880 | Msa1078870 | 0.804968 | 1.674297e-49 | -8.615850e-47 |
| Msa0817540 | Msa1078870 | 0.810387 | 1.181953e-50 | -8.615850e-47 |
| Msa0830090 | Msa1078870 | 0.801186 | 1.014015e-48 | -8.615850e-47 |
| Msa0128750 | Msa1078870 | 0.847026 | 1.499794e-59 | -8.615850e-47 |
| Msa0129660 | Msa1078870 | 0.833540 | 5.028424e-56 | -8.615850e-47 |
| Msa0130420 | Msa1078870 | 0.822063 | 2.894827e-53 | -8.615850e-47 |
| Msa0133540 | Msa1078870 | 0.832646 | 8.395038e-56 | -8.615850e-47 |
| Msa0134580 | Msa1078870 | 0.802096 | 6.595830e-49 | -8.615850e-47 |
| Msa0140850 | Msa1078870 | 0.812939 | 3.293853e-51 | -8.615850e-47 |
| Msa0172930 | Msa1078870 | 0.822347 | 2.486529e-53 | -8.615850e-47 |
| Msa0173530 | Msa1078870 | 0.879227 | 1.480149e-69 | -8.615850e-47 |
| Msa0181490 | Msa1078870 | 0.829708 | 4.426441e-55 | -8.615850e-47 |
| Msa0183090 | Msa1078870 | 0.855621 | 5.579802e-62 | -8.615850e-47 |
| Msa0186740 | Msa1078870 | 0.811686 | 6.183763e-51 | -8.615850e-47 |
| Msa0189700 | Msa1078870 | 0.843894 | 1.058059e-58 | -8.615850e-47 |
| Msa0191450 | Msa1078870 | 0.813094 | 3.045704e-51 | -8.615850e-47 |
| Msa0191550 | Msa1078870 | 0.821838 | 3.262458e-53 | -8.615850e-47 |
| Msa0194940 | Msa1078870 | 0.882921 | 6.942615e-71 | -8.615850e-47 |
| Msa0210330 | Msa1078870 | 0.841741 | 3.954230e-58 | -8.615850e-47 |
| Msa0210360 | Msa1078870 | 0.886614 | 2.935161e-72 | -8.615850e-47 |
| Msa0219120 | Msa1078870 | 0.830588 | 2.698867e-55 | -8.615850e-47 |
| Msa0221030 | Msa1078870 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0222730 | Msa1078870 | 0.849890 | 2.417661e-60 | -8.615850e-47 |
| Msa0230490 | Msa1078870 | 0.821515 | 3.875992e-53 | -8.615850e-47 |
| Msa0232010 | Msa1078870 | 0.834369 | 3.119507e-56 | -8.615850e-47 |
| Msa0232080 | Msa1078870 | 0.833957 | 3.956438e-56 | -8.615850e-47 |
| Msa0369410 | Msa1078870 | 0.811593 | 6.479166e-51 | -8.615850e-47 |
| Msa0426090 | Msa1078870 | 0.806302 | 8.787911e-50 | -8.615850e-47 |
| Msa0426250 | Msa1078870 | 0.837404 | 5.302813e-57 | -8.615850e-47 |
| Msa0463520 | Msa1078870 | 0.827114 | 1.870248e-54 | -8.615850e-47 |
| Msa0471880 | Msa1078870 | 0.863350 | 2.650338e-64 | -8.615850e-47 |
| Msa0475810 | Msa1078870 | 0.808102 | 3.653076e-50 | -8.615850e-47 |
| Msa0481520 | Msa1078870 | 0.813301 | 2.743796e-51 | -8.615850e-47 |
| Msa0481850 | Msa1078870 | 0.872226 | 3.743386e-67 | -8.615850e-47 |
| Msa1010310 | Msa1078870 | 0.818318 | 2.086420e-52 | -8.615850e-47 |
| Msa1024180 | Msa1078870 | 0.806739 | 7.106930e-50 | -8.615850e-47 |
| Msa1037290 | Msa1078870 | 0.897534 | 1.280557e-76 | -8.615850e-47 |
| Msa1039520 | Msa1078870 | 0.803287 | 3.746891e-49 | -8.615850e-47 |
| Msa1040160 | Msa1078870 | 0.861291 | 1.137495e-63 | -8.615850e-47 |
| Msa1041680 | Msa1078870 | 0.813197 | 2.890858e-51 | -8.615850e-47 |
| Msa1078870 | Msa1078980 | 0.974118 | 1.349779e-137 | -8.615850e-47 |
| Msa1078870 | Msa1079920 | 0.801445 | 8.972772e-49 | -8.615850e-47 |
| Msa1078870 | Msa1080350 | 0.882624 | 8.914359e-71 | -8.615850e-47 |
| Msa1078870 | Msa1083370 | 0.822675 | 2.086819e-53 | -8.615850e-47 |
| Msa1078870 | Msa1088490 | 0.826782 | 2.245890e-54 | -8.615850e-47 |
| Msa1078870 | Msa1094380 | 0.830101 | 3.550571e-55 | -8.615850e-47 |
| Msa1078870 | Msa1096900 | 0.805331 | 1.405770e-49 | -8.615850e-47 |
| Msa1078870 | Msa1124850 | 0.819753 | 9.843030e-53 | -8.615850e-47 |
| Msa1078870 | Msa1125860 | 0.877137 | 7.994101e-69 | -8.615850e-47 |
| Msa1078870 | Msa1126060 | 0.878363 | 2.984118e-69 | -8.615850e-47 |
| Msa1078870 | Msa1126520 | 0.822920 | 1.829365e-53 | -8.615850e-47 |
| Msa1078870 | Msa1128120 | 0.837613 | 4.687219e-57 | -8.615850e-47 |
| Msa1078870 | Msa1164150 | 0.873737 | 1.166068e-67 | -8.615850e-47 |
| Msa1078870 | Msa1166570 | 0.812678 | 3.756141e-51 | -8.615850e-47 |
| Msa1078870 | Msa1167540 | 0.865822 | 4.466394e-65 | -8.615850e-47 |
| Msa1078870 | Msa1169180 | 0.978681 | 2.450146e-146 | -8.615850e-47 |
| Msa1078870 | Msa1203560 | 0.844072 | 9.482001e-59 | -8.615850e-47 |
| Msa1078870 | Msa1208330 | 0.855690 | 5.325959e-62 | -8.615850e-47 |
| Msa1078870 | Msa1215820 | 0.864798 | 9.380245e-65 | -8.615850e-47 |
| Msa1078870 | Msa1256840 | 0.857127 | 2.016540e-62 | -8.615850e-47 |
| Msa1078870 | Msa1258540 | 0.803233 | 3.844881e-49 | -8.615850e-47 |
| Msa1078870 | Msa1273340 | 0.828085 | 1.093397e-54 | -8.615850e-47 |
| Msa1078870 | Msa1295150 | 0.837622 | 4.662874e-57 | -8.615850e-47 |
| Msa1078870 | Msa1295170 | 0.811212 | 7.836296e-51 | -8.615850e-47 |
| Msa1078870 | Msa1299590 | 0.846041 | 2.785227e-59 | -8.615850e-47 |
| Msa1078870 | Msa1311400 | 0.921145 | 5.203351e-88 | -8.615850e-47 |
| Msa1078870 | Msa1321790 | 0.836795 | 7.591487e-57 | -8.615850e-47 |
| Msa1078870 | Msa1332250 | 0.929147 | 1.054501e-92 | -8.615850e-47 |
| Msa1078870 | Msa1338190 | 0.869069 | 4.079410e-66 | -8.615850e-47 |
| Msa1078870 | Msa1343260 | 0.870363 | 1.544454e-66 | -8.615850e-47 |
| Msa1078870 | Msa1356790 | 0.836210 | 1.069318e-56 | -8.615850e-47 |
| Msa1078870 | Msa1362210 | 0.816605 | 5.072543e-52 | -8.615850e-47 |
| Msa1078870 | Msa1362790 | 0.861180 | 1.229450e-63 | -8.615850e-47 |
| Msa1078870 | Msa1366180 | 0.819192 | 1.321132e-52 | -8.615850e-47 |
| Msa1078870 | Msa1368920 | 0.895255 | 1.140423e-75 | -8.615850e-47 |
| Msa1078870 | Msa1374240 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa1078870 | Msa1392590 | 0.814597 | 1.421037e-51 | -8.615850e-47 |
| Msa1078870 | Msa1397100 | 0.861373 | 1.073972e-63 | -8.615850e-47 |
| Msa1078870 | Msa1403910 | 0.832626 | 8.492238e-56 | -8.615850e-47 |
| Msa1078870 | Msa1406080 | 0.805680 | 1.187804e-49 | -8.615850e-47 |
| Msa1078870 | Msa1413500 | 0.802157 | 6.409660e-49 | -8.615850e-47 |
| Msa1078870 | Msa1418770 | 0.863966 | 1.706393e-64 | -8.615850e-47 |
| Msa1078870 | Msa1426120 | 0.995467 | 1.463166e-216 | -8.615850e-47 |
| Msa1078870 | Msa1426370 | 0.813801 | 2.129964e-51 | -8.615850e-47 |
| Msa1078870 | Msa1426490 | 0.847394 | 1.188950e-59 | -8.615850e-47 |
| Msa1078870 | Msa1427560 | 0.802163 | 6.390569e-49 | -8.615850e-47 |
| Msa1078870 | Msa1437280 | 0.822292 | 2.561286e-53 | -8.615850e-47 |
| Msa1078870 | Msa1446410 | 0.800909 | 1.155274e-48 | -8.615850e-47 |
| Msa0250820 | Msa1078870 | 0.833578 | 4.920399e-56 | -8.615850e-47 |
| Msa0250870 | Msa1078870 | 0.839080 | 1.961803e-57 | -8.615850e-47 |
| Msa0257450 | Msa1078870 | 0.852987 | 3.217019e-61 | -8.615850e-47 |
| Msa0258850 | Msa1078870 | 0.838312 | 3.098748e-57 | -8.615850e-47 |
| Msa0264010 | Msa1078870 | 0.823588 | 1.277697e-53 | -8.615850e-47 |
| Msa0269180 | Msa1078870 | 0.802042 | 6.767138e-49 | -8.615850e-47 |
| Msa0289580 | Msa1078870 | 0.830360 | 3.068595e-55 | -8.615850e-47 |
| Msa0289610 | Msa1078870 | 0.831036 | 2.095416e-55 | -8.615850e-47 |
| Msa0296720 | Msa1078870 | 0.831792 | 1.365506e-55 | -8.615850e-47 |
| Msa0297830 | Msa1078870 | 0.855861 | 4.746391e-62 | -8.615850e-47 |
| Msa0298200 | Msa1078870 | 0.829602 | 4.696706e-55 | -8.615850e-47 |
| Msa0301220 | Msa1078870 | 0.831603 | 1.520108e-55 | -8.615850e-47 |
| Msa0306690 | Msa1078870 | 0.815390 | 9.474361e-52 | -8.615850e-47 |
| Msa0327300 | Msa1078870 | 0.804353 | 2.249614e-49 | -8.615850e-47 |
| Msa0335840 | Msa1078870 | 0.872629 | 2.746755e-67 | -8.615850e-47 |
| Msa0341880 | Msa1078870 | 0.860091 | 2.630411e-63 | -8.615850e-47 |
| Msa0342850 | Msa1078870 | 0.842467 | 2.540247e-58 | -8.615850e-47 |
| Msa0348830 | Msa1078870 | 0.806365 | 8.523428e-50 | -8.615850e-47 |
| Msa0486070 | Msa1078870 | 0.842874 | 1.980976e-58 | -8.615850e-47 |
| Msa0529900 | Msa1078870 | 0.849285 | 3.568018e-60 | -8.615850e-47 |
| Msa0550420 | Msa1078870 | 0.827782 | 1.293612e-54 | -8.615850e-47 |
| Msa0584030 | Msa1078870 | 0.854880 | 9.163991e-62 | -8.615850e-47 |
| Msa0590940 | Msa1078870 | 0.802450 | 5.577182e-49 | -8.615850e-47 |
| Msa0861320 | Msa1078870 | 0.837708 | 4.432793e-57 | -8.615850e-47 |
| Msa0881290 | Msa1078870 | 0.843303 | 1.522026e-58 | -8.615850e-47 |
| Msa0888810 | Msa1078870 | 0.818578 | 1.822241e-52 | -8.615850e-47 |
| Msa0915540 | Msa1078870 | 0.811117 | 8.219890e-51 | -8.615850e-47 |
| Msa0945480 | Msa1078870 | 0.807120 | 5.901702e-50 | -8.615850e-47 |
| Msa0953310 | Msa1078870 | 0.820541 | 6.494848e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078870 | MtrunA17_Chr7g0263691 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 4.72e-101 | 285 |
| Msa1078870 | MtrunA17_Chr1g0181621 | 93.662 | 142 | 9 | 0 | 1 | 142 | 1 | 142 | 1.56e-94 | 269 |
| Msa1078870 | MtrunA17_Chr7g0239631 | 52.113 | 71 | 31 | 2 | 40 | 109 | 13 | 81 | 4.35e-16 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078870 | AT5G02960.1 | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 4.09e-98 | 278 |
| Msa1078870 | AT3G09680.1 | 92.958 | 142 | 10 | 0 | 1 | 142 | 1 | 142 | 2.12e-93 | 266 |
Find 61 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGGTCGTGAAGGTTTC+TGG | 0.178129 | 7_2:-77882453 | Msa1078870:CDS |
| GAAGTCTTGATCGCTGGATT+TGG | 0.312989 | 7_2:-77882516 | Msa1078870:CDS |
| TAATTCAAGCAACCATCATT+TGG | 0.323107 | 7_2:+77882689 | None:intergenic |
| CATAAAACTCATTTAGTTTG+AGG | 0.380711 | 7_2:+77882314 | None:intergenic |
| CATGCTGTTGGTGATATTCC+TGG | 0.406074 | 7_2:-77882483 | Msa1078870:CDS |
| TAGTTCTGCTTGGAGGAAAT+CGG | 0.419730 | 7_2:+77883609 | None:intergenic |
| AATTCAAGCAACCATCATTT+GGG | 0.428558 | 7_2:+77882690 | None:intergenic |
| CACTTACGAATGGCAGAGTT+GGG | 0.434931 | 7_2:+77882761 | None:intergenic |
| CTGCCATTCGTAAGTGTGCT+AGG | 0.435504 | 7_2:-77882754 | Msa1078870:CDS |
| TTGGTGATATTCCTGGAGTC+AGG | 0.441270 | 7_2:-77882476 | Msa1078870:CDS |
| AGCATGGGATGAACCAGAAA+AGG | 0.446685 | 7_2:+77882932 | None:intergenic |
| TTCTGGTTCATCCCATGCTA+AGG | 0.454550 | 7_2:-77882928 | Msa1078870:CDS |
| AATTTAAGAAATCTCATCTT+GGG | 0.454713 | 7_2:-77882971 | Msa1078870:CDS |
| AATCTCATCTTGGGAATGAA+TGG | 0.457554 | 7_2:-77882962 | Msa1078870:CDS |
| CAATTTAAGAAATCTCATCT+TGG | 0.461581 | 7_2:-77882972 | Msa1078870:CDS |
| CAGCCCACCTTTGCTTGATA+CGG | 0.462913 | 7_2:+77883000 | None:intergenic |
| TTTATTCACCGGAAAGATTG+AGG | 0.463634 | 7_2:+77882184 | None:intergenic |
| TAGGATGAAGTCTTGATCGC+TGG | 0.469665 | 7_2:-77882522 | Msa1078870:CDS |
| GCTGCCTTTGTCCCAAATGA+TGG | 0.476668 | 7_2:-77882701 | Msa1078870:CDS |
| AAAGATTACTAGTACTAAAA+CGG | 0.482451 | 7_2:+77882278 | None:intergenic |
| AACTAATTCTCGATCACCAT+GGG | 0.484292 | 7_2:-77883591 | Msa1078870:exon |
| TGCAGGAAGACAAGAGGAAT+GGG | 0.492442 | 7_2:-77883047 | Msa1078870:intron |
| CAAGAACAATTCCCTTAGCA+TGG | 0.494037 | 7_2:+77882916 | None:intergenic |
| CGAGAATTAGTTCTGCTTGG+AGG | 0.500410 | 7_2:+77883602 | None:intergenic |
| AGCCTAGGTCTTGAAGTTGT+GGG | 0.508957 | 7_2:-77882392 | Msa1078870:exon |
| ACACTTACGAATGGCAGAGT+TGG | 0.515105 | 7_2:+77882760 | None:intergenic |
| AAGCCTAGGTCTTGAAGTTG+TGG | 0.517866 | 7_2:-77882393 | Msa1078870:exon |
| ATCGCTGGATTTGGACGTAA+AGG | 0.518707 | 7_2:-77882507 | Msa1078870:CDS |
| GCATGGGATGAACCAGAAAA+GGG | 0.518943 | 7_2:+77882933 | None:intergenic |
| AGGAGAAGAAGGAGAAGCCT+AGG | 0.519158 | 7_2:-77882407 | Msa1078870:CDS |
| GATCGAGAATTAGTTCTGCT+TGG | 0.520258 | 7_2:+77883599 | None:intergenic |
| TTATTCACCGGAAAGATTGA+GGG | 0.524238 | 7_2:+77882185 | None:intergenic |
| TATTCCTGGAGTCAGGTTCA+AGG | 0.524415 | 7_2:-77882469 | Msa1078870:CDS |
| CTGCAGGAAGACAAGAGGAA+TGG | 0.532735 | 7_2:-77883048 | Msa1078870:intron |
| AAGAACAATTCCCTTAGCAT+GGG | 0.533822 | 7_2:+77882917 | None:intergenic |
| TCTGGTTCATCCCATGCTAA+GGG | 0.536691 | 7_2:-77882927 | Msa1078870:CDS |
| TGCCATTCGTAAGTGTGCTA+GGG | 0.546102 | 7_2:-77882753 | Msa1078870:CDS |
| AAGTGGTACAGTTTATTCAC+CGG | 0.560618 | 7_2:+77882173 | None:intergenic |
| GCAACCATCATTTGGGACAA+AGG | 0.566362 | 7_2:+77882697 | None:intergenic |
| TGGGAGCTGCTCGCAAGCTG+AGG | 0.577320 | 7_2:-77883028 | Msa1078870:CDS |
| ACGACCTTGAACCTGACTCC+AGG | 0.578153 | 7_2:+77882465 | None:intergenic |
| GGCACAACAAAAGAGAAGAT+AGG | 0.579690 | 7_2:+77882210 | None:intergenic |
| AGAAGAAGAGTATGCTAAAG+CGG | 0.586253 | 7_2:+77883632 | None:intergenic |
| GACTCCGTATCAAGCAAAGG+TGG | 0.586634 | 7_2:-77883004 | Msa1078870:CDS |
| TCTTCTCCTTGAAAAGAGCA+AGG | 0.589001 | 7_2:+77882421 | None:intergenic |
| TTTGTCTGCAGGAAGACAAG+AGG | 0.606196 | 7_2:-77883053 | Msa1078870:intron |
| AAGATAATTGAATAATCAAG+TGG | 0.606771 | 7_2:+77882156 | None:intergenic |
| GGACGTAAAGGTCATGCTGT+TGG | 0.616141 | 7_2:-77882495 | Msa1078870:CDS |
| TTCACCGGAAAGATTGAGGG+GGG | 0.622344 | 7_2:+77882188 | None:intergenic |
| GAACTAATTCTCGATCACCA+TGG | 0.625355 | 7_2:-77883592 | Msa1078870:exon |
| AACCCTAGCACACTTACGAA+TGG | 0.626506 | 7_2:+77882751 | None:intergenic |
| TAGGTCTTGAAGTTGTGGGA+TGG | 0.637581 | 7_2:-77882388 | Msa1078870:exon |
| TGGTTGCTTGAATTACATTG+AGG | 0.642212 | 7_2:-77882681 | Msa1078870:CDS |
| TATTCACCGGAAAGATTGAG+GGG | 0.643789 | 7_2:+77882186 | None:intergenic |
| AGTCAGGTTCAAGGTCGTGA+AGG | 0.647492 | 7_2:-77882460 | Msa1078870:CDS |
| ACTCCGTATCAAGCAAAGGT+GGG | 0.652737 | 7_2:-77883003 | Msa1078870:CDS |
| GGAGACTCCGTATCAAGCAA+AGG | 0.654928 | 7_2:-77883007 | Msa1078870:CDS |
| ATCCCACAACTTCAAGACCT+AGG | 0.665200 | 7_2:+77882390 | None:intergenic |
| TCACCGGAAAGATTGAGGGG+GGG | 0.673696 | 7_2:+77882189 | None:intergenic |
| ATTCACCGGAAAGATTGAGG+GGG | 0.689564 | 7_2:+77882187 | None:intergenic |
| ACTAATTCTCGATCACCATG+GGG | 0.745036 | 7_2:-77883590 | Msa1078870:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAAATTTAGTTAATTTT+AGG | - | chr7_2:77882657-77882676 | Msa1078870:intron | 10.0% |
| !!! | GAAAAAATTTAGTTAATTTT+AGG | - | chr7_2:77882657-77882676 | Msa1078870:intron | 10.0% |
| !!! | ATTTGTATATTTCTAGTATT+AGG | - | chr7_2:77882502-77882521 | Msa1078870:CDS | 15.0% |
| !!! | ATTTGTATATTTCTAGTATT+AGG | - | chr7_2:77882502-77882521 | Msa1078870:CDS | 15.0% |
| !!! | AATTTAGTTAATTTTAGGCA+TGG | - | chr7_2:77882662-77882681 | Msa1078870:intron | 20.0% |
| !! | AATTTAAGAAATCTCATCTT+GGG | - | chr7_2:77882828-77882847 | Msa1078870:intron | 20.0% |
| !! | AAGATATATTTAGTAGTAAG+AGG | + | chr7_2:77882931-77882950 | None:intergenic | 20.0% |
| !! | TGTAGTTTACATAGTATTAA+AGG | + | chr7_2:77883217-77883236 | None:intergenic | 20.0% |
| !! | AATGAAACTAAAGAAAAAAG+AGG | + | chr7_2:77883441-77883460 | None:intergenic | 20.0% |
| !! | AAAGATTACTAGTACTAAAA+CGG | + | chr7_2:77883524-77883543 | None:intergenic | 20.0% |
| !! | AAGATAATTGAATAATCAAG+TGG | + | chr7_2:77883646-77883665 | None:intergenic | 20.0% |
| !!! | AATTTAGTTAATTTTAGGCA+TGG | - | chr7_2:77882662-77882681 | Msa1078870:intron | 20.0% |
| !! | AATTTAAGAAATCTCATCTT+GGG | - | chr7_2:77882828-77882847 | Msa1078870:intron | 20.0% |
| !! | AAGATATATTTAGTAGTAAG+AGG | + | chr7_2:77882931-77882950 | None:intergenic | 20.0% |
| !! | TGTAGTTTACATAGTATTAA+AGG | + | chr7_2:77883217-77883236 | None:intergenic | 20.0% |
| !! | AATGAAACTAAAGAAAAAAG+AGG | + | chr7_2:77883441-77883460 | None:intergenic | 20.0% |
| !! | AAAGATTACTAGTACTAAAA+CGG | + | chr7_2:77883524-77883543 | None:intergenic | 20.0% |
| !! | AAGATAATTGAATAATCAAG+TGG | + | chr7_2:77883646-77883665 | None:intergenic | 20.0% |
| ! | TTCAAATACGACAATTAGAA+TGG | + | chr7_2:77882302-77882321 | None:intergenic | 25.0% |
| ! | TTTGAATTTGACTCTGAATT+TGG | - | chr7_2:77882316-77882335 | Msa1078870:three_prime_UTR | 25.0% |
| !!! | GAATTTTTTGCTACTTAGTA+TGG | - | chr7_2:77882438-77882457 | Msa1078870:CDS | 25.0% |
| ! | CAATTTAAGAAATCTCATCT+TGG | - | chr7_2:77882827-77882846 | Msa1078870:intron | 25.0% |
| ! | TTATTACGCATATGATGTTA+AGG | - | chr7_2:77882972-77882991 | Msa1078870:CDS | 25.0% |
| ! | TATGATGTTAAGGATTTGTA+TGG | - | chr7_2:77882982-77883001 | Msa1078870:CDS | 25.0% |
| ! | AGGGTTCAATTAATCAAAAA+TGG | - | chr7_2:77883065-77883084 | Msa1078870:intron | 25.0% |
| ! | GGGTTCAATTAATCAAAAAT+GGG | - | chr7_2:77883066-77883085 | Msa1078870:intron | 25.0% |
| ! | AATTAACATAACAGACTCAA+AGG | + | chr7_2:77883191-77883210 | None:intergenic | 25.0% |
| !!! | CATAAAACTCATTTAGTTTG+AGG | + | chr7_2:77883488-77883507 | None:intergenic | 25.0% |
| !! | CTCAAACTAAATGAGTTTTA+TGG | - | chr7_2:77883486-77883505 | Msa1078870:intron | 25.0% |
| ! | TTCAAATACGACAATTAGAA+TGG | + | chr7_2:77882302-77882321 | None:intergenic | 25.0% |
| ! | TTTGAATTTGACTCTGAATT+TGG | - | chr7_2:77882316-77882335 | Msa1078870:three_prime_UTR | 25.0% |
| !!! | GAATTTTTTGCTACTTAGTA+TGG | - | chr7_2:77882438-77882457 | Msa1078870:CDS | 25.0% |
| ! | CAATTTAAGAAATCTCATCT+TGG | - | chr7_2:77882827-77882846 | Msa1078870:intron | 25.0% |
| ! | TTATTACGCATATGATGTTA+AGG | - | chr7_2:77882972-77882991 | Msa1078870:CDS | 25.0% |
| ! | TATGATGTTAAGGATTTGTA+TGG | - | chr7_2:77882982-77883001 | Msa1078870:CDS | 25.0% |
| ! | AGGGTTCAATTAATCAAAAA+TGG | - | chr7_2:77883065-77883084 | Msa1078870:intron | 25.0% |
| ! | GGGTTCAATTAATCAAAAAT+GGG | - | chr7_2:77883066-77883085 | Msa1078870:intron | 25.0% |
| ! | AATTAACATAACAGACTCAA+AGG | + | chr7_2:77883191-77883210 | None:intergenic | 25.0% |
| !!! | CATAAAACTCATTTAGTTTG+AGG | + | chr7_2:77883488-77883507 | None:intergenic | 25.0% |
| !! | CTCAAACTAAATGAGTTTTA+TGG | - | chr7_2:77883486-77883505 | Msa1078870:intron | 25.0% |
| GGAACACAAAAACATGAAAT+AGG | - | chr7_2:77882382-77882401 | Msa1078870:exon | 30.0% | |
| ! | ATTCGCTTCATTTGAAATCA+TGG | - | chr7_2:77882538-77882557 | Msa1078870:intron | 30.0% |
| ! | TTTGTTTATCTTTTGTCTGC+AGG | - | chr7_2:77882735-77882754 | Msa1078870:CDS | 30.0% |
| ! | TTTTATGTGTAGTGGTATTG+AGG | - | chr7_2:77883007-77883026 | Msa1078870:CDS | 30.0% |
| AATTCAAGCAACCATCATTT+GGG | + | chr7_2:77883112-77883131 | None:intergenic | 30.0% | |
| TAATTCAAGCAACCATCATT+TGG | + | chr7_2:77883113-77883132 | None:intergenic | 30.0% | |
| ATGTATATCCTCCAGTAATA+TGG | - | chr7_2:77883237-77883256 | Msa1078870:intron | 30.0% | |
| ATCATCAACAACCATATTAC+TGG | + | chr7_2:77883251-77883270 | None:intergenic | 30.0% | |
| ! | AGTAATATGGTTGTTGATGA+TGG | - | chr7_2:77883250-77883269 | Msa1078870:intron | 30.0% |
| GGAACACAAAAACATGAAAT+AGG | - | chr7_2:77882382-77882401 | Msa1078870:exon | 30.0% | |
| ! | ATTCGCTTCATTTGAAATCA+TGG | - | chr7_2:77882538-77882557 | Msa1078870:intron | 30.0% |
| ! | TTTGTTTATCTTTTGTCTGC+AGG | - | chr7_2:77882735-77882754 | Msa1078870:CDS | 30.0% |
| ! | TTTTATGTGTAGTGGTATTG+AGG | - | chr7_2:77883007-77883026 | Msa1078870:CDS | 30.0% |
| AATTCAAGCAACCATCATTT+GGG | + | chr7_2:77883112-77883131 | None:intergenic | 30.0% | |
| TAATTCAAGCAACCATCATT+TGG | + | chr7_2:77883113-77883132 | None:intergenic | 30.0% | |
| ATGTATATCCTCCAGTAATA+TGG | - | chr7_2:77883237-77883256 | Msa1078870:intron | 30.0% | |
| ATCATCAACAACCATATTAC+TGG | + | chr7_2:77883251-77883270 | None:intergenic | 30.0% | |
| ! | AGTAATATGGTTGTTGATGA+TGG | - | chr7_2:77883250-77883269 | Msa1078870:intron | 30.0% |
| ! | AGAAGAAGAGTATGCTAAAG+CGG | + | chr7_2:77882170-77882189 | None:intergenic | 35.0% |
| AACTAATTCTCGATCACCAT+GGG | - | chr7_2:77882208-77882227 | Msa1078870:three_prime_UTR | 35.0% | |
| ! | TCTGTTTGCTTTCTGAGAAT+TGG | - | chr7_2:77882360-77882379 | Msa1078870:three_prime_UTR | 35.0% |
| ! | CTGTTTGCTTTCTGAGAATT+GGG | - | chr7_2:77882361-77882380 | Msa1078870:three_prime_UTR | 35.0% |
| AATCTCATCTTGGGAATGAA+TGG | - | chr7_2:77882837-77882856 | Msa1078870:intron | 35.0% | |
| AAGAACAATTCCCTTAGCAT+GGG | + | chr7_2:77882885-77882904 | None:intergenic | 35.0% | |
| ! | GTATGGTCTTTTATGTGTAG+TGG | - | chr7_2:77882999-77883018 | Msa1078870:CDS | 35.0% |
| TGGTTGCTTGAATTACATTG+AGG | - | chr7_2:77883118-77883137 | Msa1078870:intron | 35.0% | |
| ATCAACAACCATATTACTGG+AGG | + | chr7_2:77883248-77883267 | None:intergenic | 35.0% | |
| TTATTCACCGGAAAGATTGA+GGG | + | chr7_2:77883617-77883636 | None:intergenic | 35.0% | |
| TTTATTCACCGGAAAGATTG+AGG | + | chr7_2:77883618-77883637 | None:intergenic | 35.0% | |
| AAGTGGTACAGTTTATTCAC+CGG | + | chr7_2:77883629-77883648 | None:intergenic | 35.0% | |
| ! | AGAAGAAGAGTATGCTAAAG+CGG | + | chr7_2:77882170-77882189 | None:intergenic | 35.0% |
| AACTAATTCTCGATCACCAT+GGG | - | chr7_2:77882208-77882227 | Msa1078870:three_prime_UTR | 35.0% | |
| ! | TCTGTTTGCTTTCTGAGAAT+TGG | - | chr7_2:77882360-77882379 | Msa1078870:three_prime_UTR | 35.0% |
| ! | CTGTTTGCTTTCTGAGAATT+GGG | - | chr7_2:77882361-77882380 | Msa1078870:three_prime_UTR | 35.0% |
| AATCTCATCTTGGGAATGAA+TGG | - | chr7_2:77882837-77882856 | Msa1078870:intron | 35.0% | |
| AAGAACAATTCCCTTAGCAT+GGG | + | chr7_2:77882885-77882904 | None:intergenic | 35.0% | |
| ! | GTATGGTCTTTTATGTGTAG+TGG | - | chr7_2:77882999-77883018 | Msa1078870:CDS | 35.0% |
| TGGTTGCTTGAATTACATTG+AGG | - | chr7_2:77883118-77883137 | Msa1078870:intron | 35.0% | |
| ATCAACAACCATATTACTGG+AGG | + | chr7_2:77883248-77883267 | None:intergenic | 35.0% | |
| TTATTCACCGGAAAGATTGA+GGG | + | chr7_2:77883617-77883636 | None:intergenic | 35.0% | |
| TTTATTCACCGGAAAGATTG+AGG | + | chr7_2:77883618-77883637 | None:intergenic | 35.0% | |
| AAGTGGTACAGTTTATTCAC+CGG | + | chr7_2:77883629-77883648 | None:intergenic | 35.0% | |
| ! | TAGTTCTGCTTGGAGGAAAT+CGG | + | chr7_2:77882193-77882212 | None:intergenic | 40.0% |
| !! | GATCGAGAATTAGTTCTGCT+TGG | + | chr7_2:77882203-77882222 | None:intergenic | 40.0% |
| GAACTAATTCTCGATCACCA+TGG | - | chr7_2:77882207-77882226 | Msa1078870:three_prime_UTR | 40.0% | |
| ACTAATTCTCGATCACCATG+GGG | - | chr7_2:77882209-77882228 | Msa1078870:three_prime_UTR | 40.0% | |
| TGTGAAGTTGTATTACCCCA+TGG | + | chr7_2:77882227-77882246 | None:intergenic | 40.0% | |
| ! | GAATGGAAGAAACCCTTTTC+TGG | - | chr7_2:77882854-77882873 | Msa1078870:intron | 40.0% |
| CAAGAACAATTCCCTTAGCA+TGG | + | chr7_2:77882886-77882905 | None:intergenic | 40.0% | |
| !! | GGTTGTTGATGATGGTTTGT+AGG | - | chr7_2:77883258-77883277 | Msa1078870:intron | 40.0% |
| TCTTCTCCTTGAAAAGAGCA+AGG | + | chr7_2:77883381-77883400 | None:intergenic | 40.0% | |
| !! | TGCTCTTTTCAAGGAGAAGA+AGG | - | chr7_2:77883381-77883400 | Msa1078870:intron | 40.0% |
| GGCACAACAAAAGAGAAGAT+AGG | + | chr7_2:77883592-77883611 | None:intergenic | 40.0% | |
| TATTCACCGGAAAGATTGAG+GGG | + | chr7_2:77883616-77883635 | None:intergenic | 40.0% | |
| CAATTATCTTGCAAGAGCAG+AGG | - | chr7_2:77883656-77883675 | Msa1078870:five_prime_UTR | 40.0% | |
| ! | TAGTTCTGCTTGGAGGAAAT+CGG | + | chr7_2:77882193-77882212 | None:intergenic | 40.0% |
| !! | GATCGAGAATTAGTTCTGCT+TGG | + | chr7_2:77882203-77882222 | None:intergenic | 40.0% |
| GAACTAATTCTCGATCACCA+TGG | - | chr7_2:77882207-77882226 | Msa1078870:three_prime_UTR | 40.0% | |
| ACTAATTCTCGATCACCATG+GGG | - | chr7_2:77882209-77882228 | Msa1078870:three_prime_UTR | 40.0% | |
| TGTGAAGTTGTATTACCCCA+TGG | + | chr7_2:77882227-77882246 | None:intergenic | 40.0% | |
| ! | GAATGGAAGAAACCCTTTTC+TGG | - | chr7_2:77882854-77882873 | Msa1078870:intron | 40.0% |
| CAAGAACAATTCCCTTAGCA+TGG | + | chr7_2:77882886-77882905 | None:intergenic | 40.0% | |
| !! | GGTTGTTGATGATGGTTTGT+AGG | - | chr7_2:77883258-77883277 | Msa1078870:intron | 40.0% |
| TCTTCTCCTTGAAAAGAGCA+AGG | + | chr7_2:77883381-77883400 | None:intergenic | 40.0% | |
| !! | TGCTCTTTTCAAGGAGAAGA+AGG | - | chr7_2:77883381-77883400 | Msa1078870:intron | 40.0% |
| GGCACAACAAAAGAGAAGAT+AGG | + | chr7_2:77883592-77883611 | None:intergenic | 40.0% | |
| TATTCACCGGAAAGATTGAG+GGG | + | chr7_2:77883616-77883635 | None:intergenic | 40.0% | |
| !! | CGAGAATTAGTTCTGCTTGG+AGG | + | chr7_2:77882200-77882219 | None:intergenic | 45.0% |
| TTTGTCTGCAGGAAGACAAG+AGG | - | chr7_2:77882746-77882765 | Msa1078870:CDS | 45.0% | |
| TGCAGGAAGACAAGAGGAAT+GGG | - | chr7_2:77882752-77882771 | Msa1078870:CDS | 45.0% | |
| ACTCCGTATCAAGCAAAGGT+GGG | - | chr7_2:77882796-77882815 | Msa1078870:intron | 45.0% | |
| GCATGGGATGAACCAGAAAA+GGG | + | chr7_2:77882869-77882888 | None:intergenic | 45.0% | |
| AGCATGGGATGAACCAGAAA+AGG | + | chr7_2:77882870-77882889 | None:intergenic | 45.0% | |
| !! | TTCTGGTTCATCCCATGCTA+AGG | - | chr7_2:77882871-77882890 | Msa1078870:intron | 45.0% |
| ! | TCTGGTTCATCCCATGCTAA+GGG | - | chr7_2:77882872-77882891 | Msa1078870:intron | 45.0% |
| CACTTACGAATGGCAGAGTT+GGG | + | chr7_2:77883041-77883060 | None:intergenic | 45.0% | |
| ACACTTACGAATGGCAGAGT+TGG | + | chr7_2:77883042-77883061 | None:intergenic | 45.0% | |
| TGCCATTCGTAAGTGTGCTA+GGG | - | chr7_2:77883046-77883065 | Msa1078870:intron | 45.0% | |
| AACCCTAGCACACTTACGAA+TGG | + | chr7_2:77883051-77883070 | None:intergenic | 45.0% | |
| ! | GCAACCATCATTTGGGACAA+AGG | + | chr7_2:77883105-77883124 | None:intergenic | 45.0% |
| TAGGATGAAGTCTTGATCGC+TGG | - | chr7_2:77883277-77883296 | Msa1078870:intron | 45.0% | |
| GAAGTCTTGATCGCTGGATT+TGG | - | chr7_2:77883283-77883302 | Msa1078870:intron | 45.0% | |
| ATCGCTGGATTTGGACGTAA+AGG | - | chr7_2:77883292-77883311 | Msa1078870:intron | 45.0% | |
| !! | CATGCTGTTGGTGATATTCC+TGG | - | chr7_2:77883316-77883335 | Msa1078870:intron | 45.0% |
| ! | TTGGTGATATTCCTGGAGTC+AGG | - | chr7_2:77883323-77883342 | Msa1078870:intron | 45.0% |
| TATTCCTGGAGTCAGGTTCA+AGG | - | chr7_2:77883330-77883349 | Msa1078870:intron | 45.0% | |
| TTCAAGGTCGTGAAGGTTTC+TGG | - | chr7_2:77883346-77883365 | Msa1078870:intron | 45.0% | |
| ! | CTCTCTCCTTGCTCTTTTCA+AGG | - | chr7_2:77883372-77883391 | Msa1078870:intron | 45.0% |
| AAGCCTAGGTCTTGAAGTTG+TGG | - | chr7_2:77883406-77883425 | Msa1078870:intron | 45.0% | |
| AGCCTAGGTCTTGAAGTTGT+GGG | - | chr7_2:77883407-77883426 | Msa1078870:intron | 45.0% | |
| ATCCCACAACTTCAAGACCT+AGG | + | chr7_2:77883412-77883431 | None:intergenic | 45.0% | |
| TAGGTCTTGAAGTTGTGGGA+TGG | - | chr7_2:77883411-77883430 | Msa1078870:intron | 45.0% | |
| ATTCACCGGAAAGATTGAGG+GGG | + | chr7_2:77883615-77883634 | None:intergenic | 45.0% | |
| !! | CGAGAATTAGTTCTGCTTGG+AGG | + | chr7_2:77882200-77882219 | None:intergenic | 45.0% |
| TTTGTCTGCAGGAAGACAAG+AGG | - | chr7_2:77882746-77882765 | Msa1078870:CDS | 45.0% | |
| TGCAGGAAGACAAGAGGAAT+GGG | - | chr7_2:77882752-77882771 | Msa1078870:CDS | 45.0% | |
| ACTCCGTATCAAGCAAAGGT+GGG | - | chr7_2:77882796-77882815 | Msa1078870:intron | 45.0% | |
| GCATGGGATGAACCAGAAAA+GGG | + | chr7_2:77882869-77882888 | None:intergenic | 45.0% | |
| AGCATGGGATGAACCAGAAA+AGG | + | chr7_2:77882870-77882889 | None:intergenic | 45.0% | |
| !! | TTCTGGTTCATCCCATGCTA+AGG | - | chr7_2:77882871-77882890 | Msa1078870:intron | 45.0% |
| ! | TCTGGTTCATCCCATGCTAA+GGG | - | chr7_2:77882872-77882891 | Msa1078870:intron | 45.0% |
| CACTTACGAATGGCAGAGTT+GGG | + | chr7_2:77883041-77883060 | None:intergenic | 45.0% | |
| ACACTTACGAATGGCAGAGT+TGG | + | chr7_2:77883042-77883061 | None:intergenic | 45.0% | |
| TGCCATTCGTAAGTGTGCTA+GGG | - | chr7_2:77883046-77883065 | Msa1078870:intron | 45.0% | |
| AACCCTAGCACACTTACGAA+TGG | + | chr7_2:77883051-77883070 | None:intergenic | 45.0% | |
| ! | GCAACCATCATTTGGGACAA+AGG | + | chr7_2:77883105-77883124 | None:intergenic | 45.0% |
| TAGGATGAAGTCTTGATCGC+TGG | - | chr7_2:77883277-77883296 | Msa1078870:intron | 45.0% | |
| GAAGTCTTGATCGCTGGATT+TGG | - | chr7_2:77883283-77883302 | Msa1078870:intron | 45.0% | |
| ATCGCTGGATTTGGACGTAA+AGG | - | chr7_2:77883292-77883311 | Msa1078870:intron | 45.0% | |
| !! | CATGCTGTTGGTGATATTCC+TGG | - | chr7_2:77883316-77883335 | Msa1078870:intron | 45.0% |
| ! | TTGGTGATATTCCTGGAGTC+AGG | - | chr7_2:77883323-77883342 | Msa1078870:intron | 45.0% |
| TATTCCTGGAGTCAGGTTCA+AGG | - | chr7_2:77883330-77883349 | Msa1078870:intron | 45.0% | |
| TTCAAGGTCGTGAAGGTTTC+TGG | - | chr7_2:77883346-77883365 | Msa1078870:intron | 45.0% | |
| ! | CTCTCTCCTTGCTCTTTTCA+AGG | - | chr7_2:77883372-77883391 | Msa1078870:intron | 45.0% |
| AAGCCTAGGTCTTGAAGTTG+TGG | - | chr7_2:77883406-77883425 | Msa1078870:intron | 45.0% | |
| AGCCTAGGTCTTGAAGTTGT+GGG | - | chr7_2:77883407-77883426 | Msa1078870:intron | 45.0% | |
| ATCCCACAACTTCAAGACCT+AGG | + | chr7_2:77883412-77883431 | None:intergenic | 45.0% | |
| TAGGTCTTGAAGTTGTGGGA+TGG | - | chr7_2:77883411-77883430 | Msa1078870:intron | 45.0% | |
| ATTCACCGGAAAGATTGAGG+GGG | + | chr7_2:77883615-77883634 | None:intergenic | 45.0% | |
| CTGCAGGAAGACAAGAGGAA+TGG | - | chr7_2:77882751-77882770 | Msa1078870:CDS | 50.0% | |
| GGAGACTCCGTATCAAGCAA+AGG | - | chr7_2:77882792-77882811 | Msa1078870:intron | 50.0% | |
| GACTCCGTATCAAGCAAAGG+TGG | - | chr7_2:77882795-77882814 | Msa1078870:intron | 50.0% | |
| CAGCCCACCTTTGCTTGATA+CGG | + | chr7_2:77882802-77882821 | None:intergenic | 50.0% | |
| CTGCCATTCGTAAGTGTGCT+AGG | - | chr7_2:77883045-77883064 | Msa1078870:CDS | 50.0% | |
| GCTGCCTTTGTCCCAAATGA+TGG | - | chr7_2:77883098-77883117 | Msa1078870:intron | 50.0% | |
| GGACGTAAAGGTCATGCTGT+TGG | - | chr7_2:77883304-77883323 | Msa1078870:intron | 50.0% | |
| AGTCAGGTTCAAGGTCGTGA+AGG | - | chr7_2:77883339-77883358 | Msa1078870:intron | 50.0% | |
| AGGAGAAGAAGGAGAAGCCT+AGG | - | chr7_2:77883392-77883411 | Msa1078870:intron | 50.0% | |
| TTCACCGGAAAGATTGAGGG+GGG | + | chr7_2:77883614-77883633 | None:intergenic | 50.0% | |
| CTGCAGGAAGACAAGAGGAA+TGG | - | chr7_2:77882751-77882770 | Msa1078870:CDS | 50.0% | |
| GGAGACTCCGTATCAAGCAA+AGG | - | chr7_2:77882792-77882811 | Msa1078870:intron | 50.0% | |
| GACTCCGTATCAAGCAAAGG+TGG | - | chr7_2:77882795-77882814 | Msa1078870:intron | 50.0% | |
| CAGCCCACCTTTGCTTGATA+CGG | + | chr7_2:77882802-77882821 | None:intergenic | 50.0% | |
| CTGCCATTCGTAAGTGTGCT+AGG | - | chr7_2:77883045-77883064 | Msa1078870:CDS | 50.0% | |
| GCTGCCTTTGTCCCAAATGA+TGG | - | chr7_2:77883098-77883117 | Msa1078870:intron | 50.0% | |
| GGACGTAAAGGTCATGCTGT+TGG | - | chr7_2:77883304-77883323 | Msa1078870:intron | 50.0% | |
| AGTCAGGTTCAAGGTCGTGA+AGG | - | chr7_2:77883339-77883358 | Msa1078870:intron | 50.0% | |
| AGGAGAAGAAGGAGAAGCCT+AGG | - | chr7_2:77883392-77883411 | Msa1078870:intron | 50.0% | |
| TTCACCGGAAAGATTGAGGG+GGG | + | chr7_2:77883614-77883633 | None:intergenic | 50.0% | |
| ACGACCTTGAACCTGACTCC+AGG | + | chr7_2:77883337-77883356 | None:intergenic | 55.0% | |
| TCACCGGAAAGATTGAGGGG+GGG | + | chr7_2:77883613-77883632 | None:intergenic | 55.0% | |
| ACGACCTTGAACCTGACTCC+AGG | + | chr7_2:77883337-77883356 | None:intergenic | 55.0% | |
| TCACCGGAAAGATTGAGGGG+GGG | + | chr7_2:77883613-77883632 | None:intergenic | 55.0% | |
| GTGCCCCCCCTCAATCTTTC+CGG | - | chr7_2:77883607-77883626 | Msa1078870:five_prime_UTR | 60.0% | |
| GTGCCCCCCCTCAATCTTTC+CGG | - | chr7_2:77883607-77883626 | Msa1078870:five_prime_UTR | 60.0% | |
| TGGGAGCTGCTCGCAAGCTG+AGG | - | chr7_2:77882771-77882790 | Msa1078870:CDS | 65.0% | |
| TGGGAGCTGCTCGCAAGCTG+AGG | - | chr7_2:77882771-77882790 | Msa1078870:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 77882146 | 77883675 | 77882146 | ID=Msa1078870;Name=Msa1078870 |
| chr7_2 | mRNA | 77882146 | 77883675 | 77882146 | ID=Msa1078870-mRNA-1;Parent=Msa1078870;Name=Msa1078870-mRNA-1;_AED=0.02;_eAED=0.02;_QI=80|1|1|1|1|1|4|255|142 |
| chr7_2 | exon | 77882146 | 77882541 | 77882146 | ID=Msa1078870-mRNA-1:exon:19252;Parent=Msa1078870-mRNA-1 |
| chr7_2 | exon | 77882676 | 77882802 | 77882676 | ID=Msa1078870-mRNA-1:exon:19251;Parent=Msa1078870-mRNA-1 |
| chr7_2 | exon | 77882909 | 77883064 | 77882909 | ID=Msa1078870-mRNA-1:exon:19250;Parent=Msa1078870-mRNA-1 |
| chr7_2 | exon | 77883591 | 77883675 | 77883591 | ID=Msa1078870-mRNA-1:exon:19249;Parent=Msa1078870-mRNA-1 |
| chr7_2 | five_prime_UTR | 77883596 | 77883675 | 77883596 | ID=Msa1078870-mRNA-1:five_prime_utr;Parent=Msa1078870-mRNA-1 |
| chr7_2 | CDS | 77883591 | 77883595 | 77883591 | ID=Msa1078870-mRNA-1:cds;Parent=Msa1078870-mRNA-1 |
| chr7_2 | CDS | 77882909 | 77883064 | 77882909 | ID=Msa1078870-mRNA-1:cds;Parent=Msa1078870-mRNA-1 |
| chr7_2 | CDS | 77882676 | 77882802 | 77882676 | ID=Msa1078870-mRNA-1:cds;Parent=Msa1078870-mRNA-1 |
| chr7_2 | CDS | 77882401 | 77882541 | 77882401 | ID=Msa1078870-mRNA-1:cds;Parent=Msa1078870-mRNA-1 |
| chr7_2 | three_prime_UTR | 77882146 | 77882400 | 77882146 | ID=Msa1078870-mRNA-1:three_prime_utr;Parent=Msa1078870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
