AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0106580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0106580 MtrunA17_Chr1g0162621 93.062 663 26 2 1 645 1 661 0.0 1275
Msa0106580 MtrunA17_Chr4g0034181 77.610 661 126 5 1 643 1 657 0.0 1076
Msa0106580 MtrunA17_Chr5g0396691 55.438 662 273 5 3 645 4 662 0.0 764
Msa0106580 MtrunA17_Chr5g0396711 55.199 654 269 5 5 638 6 655 0.0 751
Msa0106580 MtrunA17_Chr8g0388081 57.095 599 236 4 62 641 1 597 0.0 717
Msa0106580 MtrunA17_Chr1g0194371 47.050 661 325 6 5 644 4 660 0.0 613
Msa0106580 MtrunA17_Chr7g0270221 43.906 681 298 8 5 644 4 641 0.0 564
Msa0106580 MtrunA17_Chr1g0205711 39.028 638 354 12 26 639 60 686 3.74e-140 425
Msa0106580 MtrunA17_Chr3g0120731 31.928 664 374 20 36 637 79 726 9.81e-86 283
Msa0106580 MtrunA17_Chr1g0160041 30.148 607 366 16 74 637 103 694 1.12e-79 266
Msa0106580 MtrunA17_Chr3g0124631 28.302 689 416 17 10 637 25 696 7.40e-77 259
Msa0106580 MtrunA17_Chr3g0121931 25.444 676 383 25 48 638 81 720 9.54e-42 161
Msa0106580 MtrunA17_Chr3g0121951 26.667 645 374 24 69 638 95 715 2.56e-41 160
Msa0106580 MtrunA17_Chr8g0377991 24.060 665 408 19 48 638 83 724 1.34e-33 137
Msa0106580 MtrunA17_Chr4g0028411 24.952 525 314 19 20 527 3 464 4.49e-27 115
Msa0106580 MtrunA17_Chr2g0327341 25.000 492 288 20 52 527 35 461 3.55e-25 110
Msa0106580 MtrunA17_Chr8g0370731 24.760 416 248 14 133 527 47 418 1.79e-22 101
Msa0106580 MtrunA17_Chr1g0180541 26.536 358 207 17 192 532 157 475 1.88e-21 98.6
Msa0106580 MtrunA17_Chr5g0395431 24.477 478 275 16 80 532 98 514 4.26e-21 97.8
Msa0106580 MtrunA17_Chr8g0370701 23.658 503 310 20 52 527 52 507 3.53e-20 94.7
Msa0106580 MtrunA17_Chr5g0409771 24.405 504 310 18 46 534 37 484 1.02e-19 93.2
Msa0106580 MtrunA17_Chr1g0180551 24.074 486 291 19 70 532 118 548 6.15e-19 90.9
Msa0106580 MtrunA17_Chr6g0471921 22.874 494 306 16 71 554 25 453 1.38e-18 89.4
Msa0106580 MtrunA17_Chr4g0000461 25.161 465 286 16 80 532 54 468 1.99e-18 89.0
Msa0106580 MtrunA17_Chr3g0116251 28.184 369 212 14 151 505 128 457 5.33e-17 84.7
Msa0106580 MtrunA17_Chr4g0072561 24.638 483 269 22 79 532 59 475 1.22e-16 83.6
Msa0106580 MtrunA17_Chr3g0102411 25.237 317 194 14 199 505 159 442 4.65e-15 78.6
Msa0106580 MtrunA17_Chr5g0406681 21.901 484 299 19 76 534 68 497 5.76e-14 75.1
Msa0106580 MtrunA17_Chr1g0186071 34.921 126 78 4 394 518 347 469 2.39e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0106580 AT1G49430.1 65.653 658 202 7 9 645 11 665 0.0 909
Msa0106580 AT1G64400.1 53.811 656 282 4 5 641 6 659 0.0 767
Msa0106580 AT4G23850.1 55.590 653 268 4 5 638 7 656 0.0 763
Msa0106580 AT4G11030.1 54.697 660 277 4 5 645 7 663 0.0 745
Msa0106580 AT1G49430.2 63.838 495 156 6 9 483 11 502 0.0 661
Msa0106580 AT2G47240.1 48.030 660 319 6 5 644 4 659 0.0 629
Msa0106580 AT2G47240.2 48.030 660 319 6 5 644 4 659 0.0 629
Msa0106580 AT2G47240.3 48.030 660 319 6 5 644 4 659 0.0 629
Msa0106580 AT2G47240.4 48.590 603 287 5 62 644 1 600 0.0 582
Msa0106580 AT3G05970.1 41.503 612 328 10 48 639 88 689 3.74e-148 446
Msa0106580 AT5G27600.1 41.042 614 328 12 48 639 88 689 8.78e-147 442
Msa0106580 AT2G04350.2 30.769 676 364 18 40 637 70 719 9.08e-89 291
Msa0106580 AT2G04350.1 30.769 676 364 18 40 637 70 719 9.08e-89 291
Msa0106580 AT1G77590.1 29.919 615 354 17 74 637 102 690 1.58e-75 255
Msa0106580 AT1G77590.2 30.458 568 318 17 121 637 3 544 6.15e-69 234
Msa0106580 AT3G23790.1 24.590 671 393 23 48 638 85 722 2.70e-36 145
Msa0106580 AT4G14070.1 24.143 671 393 26 45 637 94 726 9.41e-34 138
Msa0106580 AT3G21240.2 25.161 465 288 15 80 532 65 481 3.24e-24 107
Msa0106580 AT3G21240.3 25.161 465 288 15 80 532 65 481 3.24e-24 107
Msa0106580 AT3G21240.1 25.054 467 290 15 80 534 65 483 3.56e-24 107
Msa0106580 AT4G05160.1 25.586 469 272 20 79 527 55 466 1.22e-23 105
Msa0106580 AT1G51680.1 25.918 490 285 16 74 539 60 495 2.30e-23 105
Msa0106580 AT1G51680.2 26.294 483 278 17 74 532 60 488 2.43e-23 104
Msa0106580 AT1G51680.3 26.122 490 284 17 74 539 60 495 3.19e-23 104
Msa0106580 AT3G16170.1 23.881 469 286 16 103 551 130 547 9.26e-22 100
Msa0106580 AT3G21230.3 26.596 470 281 19 79 532 74 495 9.73e-22 100
Msa0106580 AT3G21230.2 26.596 470 281 19 79 532 74 495 1.03e-21 99.4
Msa0106580 AT3G21230.1 26.596 470 281 19 79 532 74 495 1.27e-21 99.8
Msa0106580 AT2G17650.1 22.857 525 306 18 34 518 49 514 9.20e-21 97.1
Msa0106580 AT4G19010.1 26.942 412 245 17 139 527 106 484 5.21e-20 94.7
Msa0106580 AT1G65890.1 24.841 471 281 18 79 521 40 465 3.39e-19 92.0
Msa0106580 AT5G16340.1 23.207 474 298 15 80 532 42 470 3.89e-19 91.7
Msa0106580 AT1G21540.1 23.711 485 275 20 80 527 42 468 1.30e-18 90.1
Msa0106580 AT1G66120.1 23.684 494 298 17 79 547 40 479 6.34e-18 88.2
Msa0106580 AT2G47245.1 47.368 76 40 0 22 97 53 128 2.65e-17 79.3
Msa0106580 AT3G21230.4 25.500 400 236 17 79 463 74 426 1.21e-11 67.8

Find 186 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCTTAACTTACTGTTAA+TGG 0.112063 1_3:+16054051 None:intergenic
GAAAATCATAATTTGGTAAT+TGG 0.161507 1_3:+16051985 Msa0106570:three_prime_UTR
TGTACTTGAAAATCATAATT+TGG 0.185887 1_3:+16051978 Msa0106570:three_prime_UTR
TGTATTCAGATTTGGGTATA+TGG 0.216286 1_3:-16052956 Msa0106580:intron
AGGGAGCCGCAATAGGATTT+TGG 0.231454 1_3:-16054534 Msa0106580:CDS
AAAGGCAAGACAATACATTT+TGG 0.247388 1_3:-16052819 Msa0106580:CDS
TTCTGTTCTTTAGGGAAGTT+TGG 0.261173 1_3:-16055080 Msa0106580:intron
AAGAAGGAAGCCGAGGAATT+TGG 0.270880 1_3:-16055382 Msa0106580:CDS
CTTCCAAGCATCTGGTTGTT+GGG 0.271312 1_3:+16056825 None:intergenic
TGTCTGTCAACCTAATAATT+TGG 0.273590 1_3:+16054930 None:intergenic
GGTCTTATGGAGTTGCCTTC+TGG 0.290118 1_3:-16057202 Msa0106580:CDS
TTGGCACATCCTGCTTCTCC+TGG 0.291225 1_3:-16055363 Msa0106580:CDS
ATAAATTCTAAGACTACTTT+TGG 0.291740 1_3:+16057425 None:intergenic
AGTCCCCTTGGGATTTCTTC+AGG 0.293756 1_3:-16057174 Msa0106580:intron
ATGAAACTCTCTCAGCTTAG+AGG 0.297392 1_3:-16052672 Msa0106580:intron
TGTCTATTGACCAAATTATT+AGG 0.302814 1_3:-16054940 Msa0106580:CDS
GGAGATCACTGTGGCATATA+TGG 0.312178 1_3:-16056421 Msa0106580:CDS
TAACGGACAAAATCAGAAAT+AGG 0.317940 1_3:+16057606 None:intergenic
GCAGCTCAAAGCTATTTATC+TGG 0.319379 1_3:-16052643 Msa0106580:CDS
ATGATAAACTCCACAGCATT+AGG 0.321331 1_3:+16055759 None:intergenic
GAAATCATTGCAGGCGATAT+TGG 0.325045 1_3:-16053207 Msa0106580:intron
GTTTCAGAACTGTGACTTCC+AGG 0.330197 1_3:+16057382 None:intergenic
ACTCAAGAGGTTATAGTTGA+TGG 0.333385 1_3:-16053342 Msa0106580:CDS
ATTCTTAATAATGACACCTT+TGG 0.336671 1_3:+16054985 None:intergenic
GCATTTATAGTGGCTGTAAA+AGG 0.338787 1_3:+16057548 None:intergenic
TTATGCCAAAGATGGTCTTA+TGG 0.345504 1_3:-16057215 Msa0106580:CDS
TTCTTAATAATGACACCTTT+GGG 0.350658 1_3:+16054986 None:intergenic
CAACTCCATAAGACCATCTT+TGG 0.351332 1_3:+16057210 None:intergenic
CCTTCCAAGCATCTGGTTGT+TGG 0.361935 1_3:+16056824 None:intergenic
TTCTTTAGGGAAGTTTGGAT+TGG 0.369117 1_3:-16055075 Msa0106580:intron
ACTGAAACTGAAACTGAAAC+TGG 0.373568 1_3:+16057333 None:intergenic
TTCAGGCAGGACCTTATTCA+TGG 0.376144 1_3:-16056653 Msa0106580:intron
TTCTCATGGCTGATCCCATT+TGG 0.378749 1_3:+16056598 None:intergenic
CTTTATTCTTGCAGGATGTC+AGG 0.384629 1_3:-16054425 Msa0106580:intron
TCCATTGCAATGATCCATTC+AGG 0.384998 1_3:+16056388 None:intergenic
TCCACATTATCACAAGGATA+TGG 0.393095 1_3:-16053791 Msa0106580:intron
GTTGTAGCTATTGTGAGCTT+TGG 0.395332 1_3:-16055424 Msa0106580:intron
GGCAATAGGTCGCCATTATC+TGG 0.395954 1_3:+16054563 None:intergenic
TCCTCAAGAGCCTTTCTGTC+GGG 0.397134 1_3:+16052896 None:intergenic
AGCCACTATAAATGCTTAGA+AGG 0.401459 1_3:-16057540 Msa0106580:five_prime_UTR
TTCTGGTTTAGAGTCCCCTT+GGG 0.408562 1_3:-16057185 Msa0106580:CDS
GGCGACCTATTGCCTCTTCA+AGG 0.410689 1_3:-16054554 Msa0106580:CDS
CTTCTGGTTTAGAGTCCCCT+TGG 0.410896 1_3:-16057186 Msa0106580:CDS
TCTTTAGGGAAGTTTGGATT+GGG 0.415694 1_3:-16055074 Msa0106580:intron
ATGTACACAAGTGGAACAAC+TGG 0.419117 1_3:-16055013 Msa0106580:CDS
CAGAAAGGCTCTTGAGGATT+GGG 0.422632 1_3:-16052891 Msa0106580:CDS
ATACCAAGGGAATCATATAA+TGG 0.425203 1_3:+16056232 None:intergenic
AGAGGAAATTCCTTGTTCTC+TGG 0.430679 1_3:-16053387 Msa0106580:CDS
CTCTTCAAGGGAGCCGCAAT+AGG 0.431801 1_3:-16054541 Msa0106580:CDS
TGATAGACTTGTGTTTGATA+AGG 0.431832 1_3:-16053987 Msa0106580:intron
TTATGATGTTTCCATCCAAA+TGG 0.431856 1_3:-16056613 Msa0106580:CDS
CGCGTTCGTATCCTGCTATC+AGG 0.439526 1_3:-16053866 Msa0106580:CDS
TCATGTATACGACCAGATAA+TGG 0.442009 1_3:-16054575 Msa0106580:CDS
TTATATGTGAGCCATGAATA+AGG 0.443315 1_3:+16056642 None:intergenic
ACAGAAAGGCTCTTGAGGAT+TGG 0.443998 1_3:-16052892 Msa0106580:CDS
TTTGACGCCTTCCAAGCATC+TGG 0.449342 1_3:+16056817 None:intergenic
TGGCACATCCTGCTTCTCCT+GGG 0.450249 1_3:-16055362 Msa0106580:CDS
ATTCTTACAAGAGTTGCATC+TGG 0.450932 1_3:+16052117 None:intergenic
GGTCTCTTCAATTTAAATGT+TGG 0.457179 1_3:+16052582 None:intergenic
GCAGTCATTGCTATTTCAGT+TGG 0.465729 1_3:+16052046 None:intergenic
GTTGATGGTTGGTTTCATAC+AGG 0.465886 1_3:-16053327 Msa0106580:intron
AGCCCCAACAACCAGATGCT+TGG 0.468239 1_3:-16056828 Msa0106580:CDS
GTCCTTCTAAGCATTTATAG+TGG 0.468616 1_3:+16057538 None:intergenic
TTGGATGAGCTTAAAAGCAC+TGG 0.469943 1_3:-16052800 Msa0106580:CDS
TCAAATTGATGAACTATATG+AGG 0.472343 1_3:-16052285 Msa0106580:CDS
GGTCTTACAGAAAGCTGTGC+TGG 0.474275 1_3:-16053552 Msa0106580:CDS
TTGGCAGGGATTCTGTTAAG+AGG 0.476289 1_3:-16056851 Msa0106580:intron
TATGATGTTTCCATCCAAAT+GGG 0.480057 1_3:-16056612 Msa0106580:CDS
AAACTCTCCCCAGGAGAAGC+AGG 0.483921 1_3:+16055354 None:intergenic
CAACTATAACCTCTTGAGTA+AGG 0.484832 1_3:+16053346 None:intergenic
TGAGTCATTCTTGGTGGCTG+TGG 0.489343 1_3:-16052924 Msa0106580:CDS
GTTCCATTATATGATTCCCT+TGG 0.491778 1_3:-16056235 Msa0106580:intron
ATTGATGCCACGGCTTCTCA+TGG 0.493042 1_3:+16056584 None:intergenic
GCTGGGTGTTTCACAGCAAT+CGG 0.493542 1_3:-16053534 Msa0106580:CDS
CCTGGCCTCGATGGTTGTCA+TGG 0.495595 1_3:+16053476 None:intergenic
AGTTTCAATTGCATTTGTAC+AGG 0.496334 1_3:-16055724 Msa0106580:CDS
TTCATGGCTCACATATAAAG+AGG 0.498137 1_3:-16056637 Msa0106580:CDS
AGATCTCTCTCTATGTCAAA+GGG 0.498603 1_3:+16052612 None:intergenic
TACATGAGCAAGTGGAAGAA+AGG 0.498681 1_3:+16054591 None:intergenic
GGAAGGCCTGCTACATCTGA+TGG 0.500055 1_3:-16057271 Msa0106580:CDS
CATGGCTGATCCCATTTGGA+TGG 0.504816 1_3:+16056602 None:intergenic
TTGTAGTATTTCAGTAATTG+TGG 0.505813 1_3:+16052561 None:intergenic
ATTGGAGAATGGCAACCAAA+TGG 0.506109 1_3:-16053189 Msa0106580:CDS
ATCTTTATGTGAAAATCTAA+AGG 0.508165 1_3:-16052837 Msa0106580:CDS
TACCTTTGTCACTATTCTAA+CGG 0.509450 1_3:+16057589 None:intergenic
GTCTTACAGAAAGCTGTGCT+GGG 0.510198 1_3:-16053551 Msa0106580:CDS
AGTGCGTCATATCCCATCTC+TGG 0.511034 1_3:+16053441 None:intergenic
CTCTCTATGTCAAAGGGAGT+TGG 0.511421 1_3:+16052618 None:intergenic
TGTTTCTGCCACACAAAAGA+AGG 0.513138 1_3:-16055398 Msa0106580:CDS
GAACTATATGAGGAAGCAAA+AGG 0.513195 1_3:-16052275 Msa0106580:CDS
CTGGGGAGAGTTTCTCCAGT+TGG 0.516499 1_3:-16055344 Msa0106580:intron
AAACACTCCTCCACATGTAC+AGG 0.517559 1_3:+16053830 None:intergenic
GGAATGAAATCTGCAGCAAA+AGG 0.517683 1_3:+16057354 None:intergenic
TTGGTAGACTAAACAAGCGT+TGG 0.517913 1_3:-16053894 Msa0106580:intron
AGATTCAAGCCTGGCCTCGA+TGG 0.521799 1_3:+16053467 None:intergenic
GCTTGAATCTGTACCAGAGA+TGG 0.522837 1_3:-16053454 Msa0106580:CDS
AAGGTGCAGCTCCTGATAGC+AGG 0.523219 1_3:+16053855 None:intergenic
TGGTAGACTAAACAAGCGTT+GGG 0.523491 1_3:-16053893 Msa0106580:intron
CTAATACGATCGAAAACTCT+AGG 0.525017 1_3:+16054351 None:intergenic
TTCCAAGCATCTGGTTGTTG+GGG 0.526086 1_3:+16056826 None:intergenic
AACACAAGTCTATCAAAGAA+AGG 0.528426 1_3:+16053995 None:intergenic
CCATGACAACCATCGAGGCC+AGG 0.528881 1_3:-16053476 Msa0106580:CDS
CACAATGGTGTATGATCCAC+AGG 0.530410 1_3:-16052012 Msa0106580:three_prime_UTR
AACTCACGGGATTGATGCCA+CGG 0.531660 1_3:+16056574 None:intergenic
GGCACATCCTGCTTCTCCTG+GGG 0.532121 1_3:-16055361 Msa0106580:CDS
TAGATCTCTCTCTATGTCAA+AGG 0.533185 1_3:+16052611 None:intergenic
AGAACAAGGAATTTCCTCTC+AGG 0.534613 1_3:+16053391 None:intergenic
CTCTGGTACAGATTCAAGCC+TGG 0.534664 1_3:+16053458 None:intergenic
GCATAAATGCATCTATAGAC+AGG 0.535542 1_3:+16057232 None:intergenic
AAGCATACCGATGATATAAG+AGG 0.536051 1_3:+16053069 None:intergenic
AGATGCATTTATGCCAAAGA+TGG 0.539890 1_3:-16057223 Msa0106580:CDS
TGCACCTTTGCCTGTACATG+TGG 0.540535 1_3:-16053840 Msa0106580:CDS
CCAACAACCAGATGCTTGGA+AGG 0.540812 1_3:-16056824 Msa0106580:CDS
AAGAGGTTATAGTTGATGGT+TGG 0.543539 1_3:-16053338 Msa0106580:CDS
GCAATGCCCTCTTATATCAT+CGG 0.544084 1_3:-16053076 Msa0106580:intron
ACCATATCCTTGTGATAATG+TGG 0.544732 1_3:+16053790 None:intergenic
AAAGGTGCTGCTTTGTGTTG+TGG 0.547465 1_3:+16054013 None:intergenic
GGCCTTCCATCAGATGTAGC+AGG 0.548577 1_3:+16057265 None:intergenic
CTGTGAAAGTTGAGGAAGGA+AGG 0.550847 1_3:-16057288 Msa0106580:CDS
AATATCTTTAAATTATCTCA+AGG 0.551439 1_3:-16053138 Msa0106580:CDS
ATGGTGCCAACTGTCCTGAA+TGG 0.551719 1_3:-16056402 Msa0106580:CDS
GGCTCCCTTGAAGAGGCAAT+AGG 0.551797 1_3:+16054549 None:intergenic
AATGATCCATTCAGGACAGT+TGG 0.553413 1_3:+16056396 None:intergenic
CTTGAATCTGTACCAGAGAT+GGG 0.556327 1_3:-16053453 Msa0106580:CDS
TAAGTTAAGATATCTAGAGA+AGG 0.556789 1_3:-16054041 Msa0106580:CDS
TTATAGTGGCTGTAAAAGGT+TGG 0.557997 1_3:+16057552 None:intergenic
TTTCAGTTTCATAATGTCAG+AGG 0.559921 1_3:-16057317 Msa0106580:exon
ATCCTCAAGAGCCTTTCTGT+CGG 0.564145 1_3:+16052895 None:intergenic
CAAATCGACGTTGCATCAGA+TGG 0.564713 1_3:+16052223 None:intergenic
AAGAGTTGCATCTGGAGTTG+CGG 0.565603 1_3:+16052125 None:intergenic
GCAGGATGTGCCAAATTCCT+CGG 0.568065 1_3:+16055372 None:intergenic
CCCCGACAGAAAGGCTCTTG+AGG 0.568269 1_3:-16052897 Msa0106580:CDS
CCTCAAGAGCCTTTCTGTCG+GGG 0.569393 1_3:+16052897 None:intergenic
TTTGGTAATTGGTTAGCCTG+TGG 0.569902 1_3:+16051996 Msa0106570:three_prime_UTR
TGTGGTAGTCCCCGACAGAA+AGG 0.569904 1_3:-16052906 Msa0106580:CDS
TATACTGTGAAAGTTGAGGA+AGG 0.570953 1_3:-16057292 Msa0106580:CDS
TGCACAATAATGTACACAAG+TGG 0.574901 1_3:-16055022 Msa0106580:CDS
TTTCAGAACTGTGACTTCCA+GGG 0.576316 1_3:+16057383 None:intergenic
AGCATACCGATGATATAAGA+GGG 0.579755 1_3:+16053070 None:intergenic
GTGTCTGAACATCTTCAAGC+AGG 0.580383 1_3:+16054400 None:intergenic
TTGTGATAATGTGGATCCAC+TGG 0.582315 1_3:+16053799 None:intergenic
TTGCAGGCGATATTGGAGAA+TGG 0.585107 1_3:-16053200 Msa0106580:intron
CTGGCCTCGATGGTTGTCAT+GGG 0.586370 1_3:+16053477 None:intergenic
GCGACCTATTGCCTCTTCAA+GGG 0.591176 1_3:-16054553 Msa0106580:CDS
CTTTCAGAACTCAACTACCC+TGG 0.591722 1_3:-16057400 Msa0106580:five_prime_UTR
GGTTTATACTGTGAAAGTTG+AGG 0.592335 1_3:-16057296 Msa0106580:CDS
AAGTTAAGATATCTAGAGAA+GGG 0.592630 1_3:-16054040 Msa0106580:CDS
TATTAGGTTGACAGACAAAG+TGG 0.595571 1_3:-16054924 Msa0106580:intron
GCGACAAGACCTTACTCAAG+AGG 0.596877 1_3:-16053355 Msa0106580:CDS
TCCTGAATGGATCATTGCAA+TGG 0.598033 1_3:-16056389 Msa0106580:CDS
TCCTCCACATGTACAGGCAA+AGG 0.600701 1_3:+16053836 None:intergenic
ACCTTTGCCTGTACATGTGG+AGG 0.605384 1_3:-16053837 Msa0106580:CDS
TGAGGAAGCAAAAGGAACAA+AGG 0.608554 1_3:-16052267 Msa0106580:CDS
CGTGGAGAAATTTGCCTGAG+AGG 0.612494 1_3:-16053405 Msa0106580:CDS
GGCCTGCTACATCTGATGGA+AGG 0.614561 1_3:-16057267 Msa0106580:CDS
ATTGACCTGAAGAAATCCCA+AGG 0.616044 1_3:+16057169 None:intergenic
CTATTGCGGCTCCCTTGAAG+AGG 0.618961 1_3:+16054542 None:intergenic
ACGTTGCATCAGATGGCCAC+AGG 0.620014 1_3:+16052230 None:intergenic
CTATAGACAGGACCTACTGA+TGG 0.620712 1_3:+16057244 None:intergenic
CCTAACAGGTCCTAATGCTG+TGG 0.621303 1_3:-16055769 Msa0106580:intron
GCCTTGCCAAAATCCTATTG+CGG 0.621543 1_3:+16054528 None:intergenic
TGGTCGTATACATGAGCAAG+TGG 0.625974 1_3:+16054583 None:intergenic
ATGCAATTGAAACTTCAGCA+TGG 0.627938 1_3:+16055733 None:intergenic
GGATCAGCCATGAGAAGCCG+TGG 0.629504 1_3:-16056591 Msa0106580:CDS
CTTGTGATAACCAGAGAACA+AGG 0.630070 1_3:+16053377 None:intergenic
CAAGGGGACTCTAAACCAGA+AGG 0.631617 1_3:+16057187 None:intergenic
GTACATTATTGTGCAAATGT+CGG 0.632622 1_3:+16055030 None:intergenic
CAACTGGAGAAACTCTCCCC+AGG 0.632932 1_3:+16055345 None:intergenic
GTCCGTTAGAATAGTGACAA+AGG 0.633370 1_3:-16057591 Msa0106580:five_prime_UTR
ACAATTACTGAAATACTACA+AGG 0.640007 1_3:-16052559 Msa0106580:intron
GGAACACCACAAAATATAGT+CGG 0.646136 1_3:+16054372 None:intergenic
TTGACCTGAAGAAATCCCAA+GGG 0.647515 1_3:+16057170 None:intergenic
TGAATGGATCATTGCAATGG+AGG 0.648367 1_3:-16056386 Msa0106580:intron
TCTGATGGAAGGCCATCAGT+AGG 0.651682 1_3:-16057256 Msa0106580:CDS
TAGACTAAACAAGCGTTGGG+TGG 0.653492 1_3:-16053890 Msa0106580:CDS
CACACAAAAGAAGGAAGCCG+AGG 0.662656 1_3:-16055389 Msa0106580:CDS
GGCATGAGTATAGTGTCCTG+TGG 0.679330 1_3:-16052246 Msa0106580:exon
CTCAGGCAAATTTCTCCACG+CGG 0.693138 1_3:+16053408 None:intergenic
CTGCACTTCAAGAAACACAA+TGG 0.699909 1_3:-16052027 Msa0106580:three_prime_UTR
GAGTGTTTGAGAGTCACCAG+TGG 0.701923 1_3:-16053815 Msa0106580:CDS
GGAACAACTGGAGAACCCAA+AGG 0.705395 1_3:-16055001 Msa0106580:CDS
AGTGGATCCACATTATCACA+AGG 0.714395 1_3:-16053797 Msa0106580:CDS
AATTCCCATGACAACCATCG+AGG 0.735979 1_3:-16053481 Msa0106580:CDS
TGTTACTAGGGAGATCACTG+TGG 0.745755 1_3:-16056430 Msa0106580:intron
TGACCTGAAGAAATCCCAAG+GGG 0.758321 1_3:+16057171 None:intergenic
GCACTTTCTAGTGAGCCGCG+TGG 0.777176 1_3:-16053423 Msa0106580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATATATAAAAATTAA+TGG + chr1_3:16055991-16056010 None:intergenic 0.0%
!! TAATTGTAACTAAAAAATAT+TGG - chr1_3:16055693-16055712 Msa0106580:intron 10.0%
!! ATAAAAATTAATGGAAAAAT+TGG + chr1_3:16055982-16056001 None:intergenic 10.0%
!!! TTTTATCTTAGAAGTTTTTA+TGG - chr1_3:16052735-16052754 Msa0106580:intron 15.0%
!! GAAATTTATTATCTGATTAA+TGG - chr1_3:16053157-16053176 Msa0106580:CDS 15.0%
!! TTAGTTTCTAATAAGTTTAT+AGG - chr1_3:16054794-16054813 Msa0106580:intron 15.0%
!!! TACAACATTGTAATATTTTT+AGG - chr1_3:16054971-16054990 Msa0106580:CDS 15.0%
!!! TATTATTATTATTTTGTGAC+AGG - chr1_3:16056042-16056061 Msa0106580:intron 15.0%
!! AATATCTTTAAATTATCTCA+AGG - chr1_3:16056477-16056496 Msa0106580:intron 15.0%
!!! ATAAATTCTAAGACTACTTT+TGG + chr1_3:16052193-16052212 None:intergenic 20.0%
!! ATGAATCTATCAAAAAGATA+AGG + chr1_3:16052678-16052697 None:intergenic 20.0%
!! ACATGTATAATAGTAGTATT+TGG - chr1_3:16052702-16052721 Msa0106580:intron 20.0%
!! AAACTACAACAAAGAATAAA+CGG + chr1_3:16052869-16052888 None:intergenic 20.0%
!! TAAAGATTTCACAATTTAAC+AGG + chr1_3:16052921-16052940 None:intergenic 20.0%
!!! ATTAATGGTTTTATGTTACT+AGG - chr1_3:16053172-16053191 Msa0106580:CDS 20.0%
!!! TTAATGGTTTTATGTTACTA+GGG - chr1_3:16053173-16053192 Msa0106580:CDS 20.0%
!! CAAAATAGTAAAATTGAATC+AGG + chr1_3:16053330-16053349 None:intergenic 20.0%
!!! ATTCAATTTTACTATTTTGC+AGG - chr1_3:16053331-16053350 Msa0106580:CDS 20.0%
!! CAAACAAATAAACCTTAATA+TGG + chr1_3:16054133-16054152 None:intergenic 20.0%
!!! CCACAATATAAAAAATTTTG+AGG + chr1_3:16054397-16054416 None:intergenic 20.0%
!!! CCTCAAAATTTTTTATATTG+TGG - chr1_3:16054394-16054413 Msa0106580:CDS 20.0%
!!! ACAATTTTCTTTAAACTTCA+AGG - chr1_3:16054721-16054740 Msa0106580:intron 20.0%
!! TACTGAAAAATTGAATGAAT+TGG + chr1_3:16054773-16054792 None:intergenic 20.0%
!! TGATTATACATTAACCATAA+AGG + chr1_3:16054838-16054857 None:intergenic 20.0%
!! ATATCTTAACTTACTGTTAA+TGG + chr1_3:16055567-16055586 None:intergenic 20.0%
!!! CTAAAAAATATTGGTTTTGT+TGG - chr1_3:16055702-16055721 Msa0106580:intron 20.0%
!!! GGATAAAACTATTTTTCATA+AGG + chr1_3:16055946-16055965 None:intergenic 20.0%
!! AAAATTAATGGAAAAATTGG+TGG + chr1_3:16055979-16055998 None:intergenic 20.0%
!! ATCTTTATGTGAAAATCTAA+AGG - chr1_3:16056778-16056797 Msa0106580:intron 20.0%
!! CAAAATCATATATACATACT+TGG + chr1_3:16056850-16056869 None:intergenic 20.0%
!!! TTTATAGTATAAAGTGCTAT+AGG + chr1_3:16057128-16057147 None:intergenic 20.0%
!! TATAGTAGAATTTCACAATT+TGG - chr1_3:16057201-16057220 Msa0106580:CDS 20.0%
!!! GAAAATCATAATTTGGTAAT+TGG + chr1_3:16057633-16057652 None:intergenic 20.0%
!! TTAAGTTGTTTATCCAAACA+TGG + chr1_3:16053437-16053456 None:intergenic 25.0%
!! TGTTTTCTTAATGTTCCATA+AGG - chr1_3:16053535-16053554 Msa0106580:CDS 25.0%
! TTTGGACGAATAAAATTCTA+TGG - chr1_3:16053623-16053642 Msa0106580:intron 25.0%
! AGAAATCACATTATCTTGTT+TGG + chr1_3:16053745-16053764 None:intergenic 25.0%
! AACAAATGTTTGTTCAGTAA+GGG + chr1_3:16054028-16054047 None:intergenic 25.0%
! AAACAAATGTTTGTTCAGTA+AGG + chr1_3:16054029-16054048 None:intergenic 25.0%
! GTTCTTCAAATCTAAAAAGT+AGG - chr1_3:16054077-16054096 Msa0106580:intron 25.0%
! AGTTTGTCAACATTAAATAG+AGG + chr1_3:16054158-16054177 None:intergenic 25.0%
! TTCTTAATAATGACACCTTT+GGG + chr1_3:16054632-16054651 None:intergenic 25.0%
! ATTCTTAATAATGACACCTT+TGG + chr1_3:16054633-16054652 None:intergenic 25.0%
! TGTCTATTGACCAAATTATT+AGG - chr1_3:16054675-16054694 Msa0106580:intron 25.0%
! TATAGAATGAGAAACCTTTA+TGG - chr1_3:16054821-16054840 Msa0106580:intron 25.0%
! GGAAATTAAATTTCACTCAT+TGG + chr1_3:16054915-16054934 None:intergenic 25.0%
! CTATATAGTTTCACAAGTAT+AGG + chr1_3:16054936-16054955 None:intergenic 25.0%
! AATATTCTCTTTATTCTTGC+AGG - chr1_3:16055182-16055201 Msa0106580:intron 25.0%
!! ACTATATGCTTTTCAAATGT+AGG - chr1_3:16055410-16055429 Msa0106580:CDS 25.0%
! TAAGTTAAGATATCTAGAGA+AGG - chr1_3:16055574-16055593 Msa0106580:intron 25.0%
! AAGTTAAGATATCTAGAGAA+GGG - chr1_3:16055575-16055594 Msa0106580:intron 25.0%
!! ACTTTATCAAAGTTTTCTGA+AGG - chr1_3:16055904-16055923 Msa0106580:intron 25.0%
!!! AAAATTGGTGGAAGTTTTAT+TGG + chr1_3:16055967-16055986 None:intergenic 25.0%
! TGAGACAACTTGAATAATAT+AGG + chr1_3:16056353-16056372 None:intergenic 25.0%
!!! TATTATTCAAGTTGTCTCAT+TGG - chr1_3:16056354-16056373 Msa0106580:intron 25.0%
!!! TAACATTTTGAAATCATTGC+AGG - chr1_3:16056399-16056418 Msa0106580:CDS 25.0%
!! TTTTCTGTCAATGATTTTCA+TGG + chr1_3:16056454-16056473 None:intergenic 25.0%
! TTTCTTTGTGTATTCAGATT+TGG - chr1_3:16056651-16056670 Msa0106580:CDS 25.0%
! TTCTTTGTGTATTCAGATTT+GGG - chr1_3:16056652-16056671 Msa0106580:intron 25.0%
! TTGTAGTATTTCAGTAATTG+TGG + chr1_3:16057057-16057076 None:intergenic 25.0%
! ACAATTACTGAAATACTACA+AGG - chr1_3:16057056-16057075 Msa0106580:intron 25.0%
! ACTATAATCCAAGTTAGTTA+AGG + chr1_3:16057187-16057206 None:intergenic 25.0%
! TATGAACTCTAATCAGATAT+TGG - chr1_3:16057253-16057272 Msa0106580:CDS 25.0%
! TCAAATTGATGAACTATATG+AGG - chr1_3:16057330-16057349 Msa0106580:five_prime_UTR 25.0%
! TAACGGACAAAATCAGAAAT+AGG + chr1_3:16052012-16052031 None:intergenic 30.0%
TACCTTTGTCACTATTCTAA+CGG + chr1_3:16052029-16052048 None:intergenic 30.0%
TTTCAGTTTCATAATGTCAG+AGG - chr1_3:16052298-16052317 Msa0106580:intron 30.0%
! GAAGTTTTTATGGTTTCCTT+TGG - chr1_3:16052745-16052764 Msa0106580:intron 30.0%
! AACATTGAGCTTGAATTTTC+AGG - chr1_3:16052945-16052964 Msa0106580:CDS 30.0%
TTATATGTGAGCCATGAATA+AGG + chr1_3:16052976-16052995 None:intergenic 30.0%
TTATGATGTTTCCATCCAAA+TGG - chr1_3:16053002-16053021 Msa0106580:intron 30.0%
TATGATGTTTCCATCCAAAT+GGG - chr1_3:16053003-16053022 Msa0106580:intron 30.0%
! AGCAAAAAAGTACATGTAAC+TGG - chr1_3:16053110-16053129 Msa0106580:CDS 30.0%
ATACCAAGGGAATCATATAA+TGG + chr1_3:16053386-16053405 None:intergenic 30.0%
AGACAAAAAAGACATACCAA+GGG + chr1_3:16053399-16053418 None:intergenic 30.0%
AAGACAAAAAAGACATACCA+AGG + chr1_3:16053400-16053419 None:intergenic 30.0%
GTTTCGTTAATGTTTCCTTA+TGG + chr1_3:16053553-16053572 None:intergenic 30.0%
ATGTGTATAACAGTGGTATT+TGG + chr1_3:16053601-16053620 None:intergenic 30.0%
CCAAATTATGTGTATAACAG+TGG + chr1_3:16053608-16053627 None:intergenic 30.0%
CCACTGTTATACACATAATT+TGG - chr1_3:16053605-16053624 Msa0106580:intron 30.0%
CTTATTTGAGCTTATCTACT+GGG + chr1_3:16053717-16053736 None:intergenic 30.0%
ACTTATTTGAGCTTATCTAC+TGG + chr1_3:16053718-16053737 None:intergenic 30.0%
AGTTTCAATTGCATTTGTAC+AGG - chr1_3:16053891-16053910 Msa0106580:intron 30.0%
AAAGAACAAGAACATACTGA+TGG + chr1_3:16053928-16053947 None:intergenic 30.0%
TTGTTCAGTAAGGGAAAAAA+TGG + chr1_3:16054019-16054038 None:intergenic 30.0%
TTTACTCACAGTCCATATTA+AGG - chr1_3:16054118-16054137 Msa0106580:intron 30.0%
AGTCATAGTGTATTAGATTG+CGG - chr1_3:16054296-16054315 Msa0106580:intron 30.0%
!! ATAAAGATTTGCTGTGTAAC+CGG + chr1_3:16054324-16054343 None:intergenic 30.0%
CACAGCAAATCTTTATATTG+CGG - chr1_3:16054328-16054347 Msa0106580:intron 30.0%
ACAGCAAATCTTTATATTGC+GGG - chr1_3:16054329-16054348 Msa0106580:intron 30.0%
TTCCTATCGGTATTCAAATT+AGG - chr1_3:16054459-16054478 Msa0106580:intron 30.0%
! TCCTTTCTTTTCTGTTCTTT+AGG - chr1_3:16054526-16054545 Msa0106580:intron 30.0%
! CCTTTCTTTTCTGTTCTTTA+GGG - chr1_3:16054527-16054546 Msa0106580:intron 30.0%
GTACATTATTGTGCAAATGT+CGG + chr1_3:16054588-16054607 None:intergenic 30.0%
TGTCTGTCAACCTAATAATT+TGG + chr1_3:16054688-16054707 None:intergenic 30.0%
!! AACTTACTGTTAATGGATTC+TGG + chr1_3:16055560-16055579 None:intergenic 30.0%
AACACAAGTCTATCAAAGAA+AGG + chr1_3:16055623-16055642 None:intergenic 30.0%
TGATAGACTTGTGTTTGATA+AGG - chr1_3:16055628-16055647 Msa0106580:intron 30.0%
! TGAACTCTTTTCACAAAGTT+TGG - chr1_3:16055668-16055687 Msa0106580:intron 30.0%
ATTATCACAAGGATATGGTA+TGG - chr1_3:16055829-16055848 Msa0106580:intron 30.0%
TGATTTATTCCTAGCAATTG+AGG - chr1_3:16056316-16056335 Msa0106580:intron 30.0%
TGTATTCAGATTTGGGTATA+TGG - chr1_3:16056659-16056678 Msa0106580:intron 30.0%
!!! AAACAGTTTTGAGTCATTCT+TGG - chr1_3:16056682-16056701 Msa0106580:intron 30.0%
! AAAGGCAAGACAATACATTT+TGG - chr1_3:16056796-16056815 Msa0106580:intron 30.0%
CTATCAAAACTTAGCAGAAT+AGG + chr1_3:16056883-16056902 None:intergenic 30.0%
GGTCTCTTCAATTTAAATGT+TGG + chr1_3:16057036-16057055 None:intergenic 30.0%
! TCTTGTTTCCTTAACTAACT+TGG - chr1_3:16057176-16057195 Msa0106580:CDS 30.0%
TTATAGTGGCTGTAAAAGGT+TGG + chr1_3:16052066-16052085 None:intergenic 35.0%
GCATTTATAGTGGCTGTAAA+AGG + chr1_3:16052070-16052089 None:intergenic 35.0%
AGCCACTATAAATGCTTAGA+AGG - chr1_3:16052075-16052094 Msa0106580:three_prime_UTR 35.0%
GTCCTTCTAAGCATTTATAG+TGG + chr1_3:16052080-16052099 None:intergenic 35.0%
ACTGAAACTGAAACTGAAAC+TGG + chr1_3:16052285-16052304 None:intergenic 35.0%
GGTTTATACTGTGAAAGTTG+AGG - chr1_3:16052319-16052338 Msa0106580:intron 35.0%
TATACTGTGAAAGTTGAGGA+AGG - chr1_3:16052323-16052342 Msa0106580:intron 35.0%
GCATAAATGCATCTATAGAC+AGG + chr1_3:16052386-16052405 None:intergenic 35.0%
AGATGCATTTATGCCAAAGA+TGG - chr1_3:16052392-16052411 Msa0106580:intron 35.0%
! TTATGCCAAAGATGGTCTTA+TGG - chr1_3:16052400-16052419 Msa0106580:intron 35.0%
TGCATGACTTTATCACAACA+TGG - chr1_3:16052575-16052594 Msa0106580:CDS 35.0%
AGATAAGGACTCATAGAACA+TGG + chr1_3:16052663-16052682 None:intergenic 35.0%
! TTTTTATGGTTTCCTTTGGC+AGG - chr1_3:16052749-16052768 Msa0106580:intron 35.0%
! TTTTATGGTTTCCTTTGGCA+GGG - chr1_3:16052750-16052769 Msa0106580:intron 35.0%
TTCATGGCTCACATATAAAG+AGG - chr1_3:16052978-16052997 Msa0106580:intron 35.0%
GTTCCATTATATGATTCCCT+TGG - chr1_3:16053380-16053399 Msa0106580:CDS 35.0%
! ACAGTTGATTTAGCCATGTT+TGG - chr1_3:16053421-16053440 Msa0106580:CDS 35.0%
AACTTGTGTTTATGCCTAAC+AGG - chr1_3:16053832-16053851 Msa0106580:CDS 35.0%
ATGATAAACTCCACAGCATT+AGG + chr1_3:16053859-16053878 None:intergenic 35.0%
ATGCAATTGAAACTTCAGCA+TGG + chr1_3:16053885-16053904 None:intergenic 35.0%
TCAAGACATGACAAAATCTG+TGG + chr1_3:16054052-16054071 None:intergenic 35.0%
ATACACTATGACTTACCAAC+TGG + chr1_3:16054289-16054308 None:intergenic 35.0%
TTATATTGTGGCCACAATTG+CGG - chr1_3:16054406-16054425 Msa0106580:CDS 35.0%
!!! CCTTGTTTTCATCTTCCTAT+CGG - chr1_3:16054446-16054465 Msa0106580:intron 35.0%
CTCCTAATTTGAATACCGAT+AGG + chr1_3:16054464-16054483 None:intergenic 35.0%
CCCTAAAGAACAGAAAAGAA+AGG + chr1_3:16054530-16054549 None:intergenic 35.0%
! TTCTGTTCTTTAGGGAAGTT+TGG - chr1_3:16054535-16054554 Msa0106580:CDS 35.0%
! TTCTTTAGGGAAGTTTGGAT+TGG - chr1_3:16054540-16054559 Msa0106580:CDS 35.0%
! TCTTTAGGGAAGTTTGGATT+GGG - chr1_3:16054541-16054560 Msa0106580:CDS 35.0%
!!! CAAATGTCGGTCTTCTTTTT+TGG + chr1_3:16054575-16054594 None:intergenic 35.0%
TGCACAATAATGTACACAAG+TGG - chr1_3:16054593-16054612 Msa0106580:CDS 35.0%
!! TATTAGGTTGACAGACAAAG+TGG - chr1_3:16054691-16054710 Msa0106580:intron 35.0%
TCATGTATACGACCAGATAA+TGG - chr1_3:16055040-16055059 Msa0106580:CDS 35.0%
! CTGAAACCGACTATATTTTG+TGG - chr1_3:16055237-16055256 Msa0106580:intron 35.0%
GGAACACCACAAAATATAGT+CGG + chr1_3:16055246-16055265 None:intergenic 35.0%
CTAATACGATCGAAAACTCT+AGG + chr1_3:16055267-16055286 None:intergenic 35.0%
AAAAGCAAAGTTTCATCTGC+TGG - chr1_3:16055437-16055456 Msa0106580:intron 35.0%
AAAGCAAAGTTTCATCTGCT+GGG - chr1_3:16055438-16055457 Msa0106580:intron 35.0%
TCCACATTATCACAAGGATA+TGG - chr1_3:16055824-16055843 Msa0106580:intron 35.0%
! ACCATATCCTTGTGATAATG+TGG + chr1_3:16055828-16055847 None:intergenic 35.0%
!! TGTGTTTTCTATGATGGGAA+CGG - chr1_3:16056107-16056126 Msa0106580:intron 35.0%
CAACTATAACCTCTTGAGTA+AGG + chr1_3:16056272-16056291 None:intergenic 35.0%
ACTCAAGAGGTTATAGTTGA+TGG - chr1_3:16056273-16056292 Msa0106580:intron 35.0%
!! AAGAGGTTATAGTTGATGGT+TGG - chr1_3:16056277-16056296 Msa0106580:intron 35.0%
! ATGATTTTCATGGCTCCATT+TGG + chr1_3:16056444-16056463 None:intergenic 35.0%
AGCATACCGATGATATAAGA+GGG + chr1_3:16056548-16056567 None:intergenic 35.0%
AAGCATACCGATGATATAAG+AGG + chr1_3:16056549-16056568 None:intergenic 35.0%
AAACAGAAATCCACTTACCT+TGG - chr1_3:16056605-16056624 Msa0106580:CDS 35.0%
ATCAACTATTGAAGCAACCA+AGG + chr1_3:16056625-16056644 None:intergenic 35.0%
! GCAGTTGAGCACAATTTTAA+TGG - chr1_3:16056746-16056765 Msa0106580:intron 35.0%
AGATCTCTCTCTATGTCAAA+GGG + chr1_3:16057006-16057025 None:intergenic 35.0%
TAGATCTCTCTCTATGTCAA+AGG + chr1_3:16057007-16057026 None:intergenic 35.0%
GAACTATATGAGGAAGCAAA+AGG - chr1_3:16057340-16057359 Msa0106580:five_prime_UTR 35.0%
ATTCTTACAAGAGTTGCATC+TGG + chr1_3:16057501-16057520 None:intergenic 35.0%
GTCCGTTAGAATAGTGACAA+AGG - chr1_3:16052024-16052043 Msa0106580:three_prime_UTR 40.0%
TTTCAGAACTGTGACTTCCA+GGG + chr1_3:16052235-16052254 None:intergenic 40.0%
GGAATGAAATCTGCAGCAAA+AGG + chr1_3:16052264-16052283 None:intergenic 40.0%
CAACTCCATAAGACCATCTT+TGG + chr1_3:16052408-16052427 None:intergenic 40.0%
TTGACCTGAAGAAATCCCAA+GGG + chr1_3:16052448-16052467 None:intergenic 40.0%
ATTGACCTGAAGAAATCCCA+AGG + chr1_3:16052449-16052468 None:intergenic 40.0%
CACAACATGGCTCAATCAAT+TGG - chr1_3:16052588-16052607 Msa0106580:CDS 40.0%
GCGTCAAAAACTCGATTCTA+AGG - chr1_3:16052813-16052832 Msa0106580:CDS 40.0%
!! TTGAGCTTGAATTTTCAGGC+AGG - chr1_3:16052949-16052968 Msa0106580:CDS 40.0%
AGGAAATGCTGAAAACTCAC+GGG + chr1_3:16053057-16053076 None:intergenic 40.0%
CAGGAAATGCTGAAAACTCA+CGG + chr1_3:16053058-16053077 None:intergenic 40.0%
AGAGAGAATGTTGAAAGAGC+AGG + chr1_3:16053077-16053096 None:intergenic 40.0%
TGCTCTTTCAACATTCTCTC+TGG - chr1_3:16053076-16053095 Msa0106580:intron 40.0%
AATGATCCATTCAGGACAGT+TGG + chr1_3:16053222-16053241 None:intergenic 40.0%
TCCTGAATGGATCATTGCAA+TGG - chr1_3:16053226-16053245 Msa0106580:intron 40.0%
TCCATTGCAATGATCCATTC+AGG + chr1_3:16053230-16053249 None:intergenic 40.0%
TGAATGGATCATTGCAATGG+AGG - chr1_3:16053229-16053248 Msa0106580:intron 40.0%
! CATATCCTCTCCAGAAGTTT+TGG - chr1_3:16053779-16053798 Msa0106580:intron 40.0%
GTTGTAGCTATTGTGAGCTT+TGG - chr1_3:16054191-16054210 Msa0106580:intron 40.0%
! TGTTTCTGCCACACAAAAGA+AGG - chr1_3:16054217-16054236 Msa0106580:intron 40.0%
AGTGTATTAGATTGCGGTTC+CGG - chr1_3:16054302-16054321 Msa0106580:intron 40.0%
TAAGTGCAATTTCGACCACA+TGG + chr1_3:16054364-16054383 None:intergenic 40.0%
CCGATAGGAAGATGAAAACA+AGG + chr1_3:16054449-16054468 None:intergenic 40.0%
CGGTATTCAAATTAGGAGCA+TGG - chr1_3:16054466-16054485 Msa0106580:intron 40.0%
!!! ATGTCGGTCTTCTTTTTTGG+TGG + chr1_3:16054572-16054591 None:intergenic 40.0%
ATGTACACAAGTGGAACAAC+TGG - chr1_3:16054602-16054621 Msa0106580:CDS 40.0%
TACATGAGCAAGTGGAAGAA+AGG + chr1_3:16055027-16055046 None:intergenic 40.0%
CTTTATTCTTGCAGGATGTC+AGG - chr1_3:16055190-16055209 Msa0106580:intron 40.0%
! GTTTTCGATCGTATTAGTGC+TGG - chr1_3:16055270-16055289 Msa0106580:intron 40.0%
! CCAAAACACTCAGAGTTTTG+TGG + chr1_3:16055513-16055532 None:intergenic 40.0%
! CCACAAAACTCTGAGTGTTT+TGG - chr1_3:16055510-16055529 Msa0106580:intron 40.0%
TTGGTAGACTAAACAAGCGT+TGG - chr1_3:16055721-16055740 Msa0106580:CDS 40.0%
TGGTAGACTAAACAAGCGTT+GGG - chr1_3:16055722-16055741 Msa0106580:CDS 40.0%
! TTGTGATAATGTGGATCCAC+TGG + chr1_3:16055819-16055838 None:intergenic 40.0%
AGTGGATCCACATTATCACA+AGG - chr1_3:16055818-16055837 Msa0106580:intron 40.0%
! GGCGATGTGTTTTCTATGAT+GGG - chr1_3:16056102-16056121 Msa0106580:intron 40.0%
!! TTTTCTATGATGGGAACGGT+TGG - chr1_3:16056111-16056130 Msa0106580:intron 40.0%
CTTGAATCTGTACCAGAGAT+GGG - chr1_3:16056162-16056181 Msa0106580:intron 40.0%
AGAACAAGGAATTTCCTCTC+AGG + chr1_3:16056227-16056246 None:intergenic 40.0%
AGAGGAAATTCCTTGTTCTC+TGG - chr1_3:16056228-16056247 Msa0106580:intron 40.0%
CTTGTGATAACCAGAGAACA+AGG + chr1_3:16056241-16056260 None:intergenic 40.0%
!! GTTGATGGTTGGTTTCATAC+AGG - chr1_3:16056288-16056307 Msa0106580:intron 40.0%
!! TGTCTCATTGGCTCTAAATG+CGG - chr1_3:16056366-16056385 Msa0106580:intron 40.0%
GAAATCATTGCAGGCGATAT+TGG - chr1_3:16056408-16056427 Msa0106580:CDS 40.0%
ATTGGAGAATGGCAACCAAA+TGG - chr1_3:16056426-16056445 Msa0106580:intron 40.0%
GCAATGCCCTCTTATATCAT+CGG - chr1_3:16056539-16056558 Msa0106580:intron 40.0%
ATTGAAGCAACCAAGGTAAG+TGG + chr1_3:16056618-16056637 None:intergenic 40.0%
!!! CAGTTTTGAGTCATTCTTGG+TGG - chr1_3:16056685-16056704 Msa0106580:intron 40.0%
! TTGGATGAGCTTAAAAGCAC+TGG - chr1_3:16056815-16056834 Msa0106580:CDS 40.0%
ATGAAACTCTCTCAGCTTAG+AGG - chr1_3:16056943-16056962 Msa0106580:intron 40.0%
! AAGCATTGTGTTCTGATGCA+TGG + chr1_3:16057230-16057249 None:intergenic 40.0%
CTTTGCGAAAATTGCTTTGC+AGG - chr1_3:16057306-16057325 Msa0106580:CDS 40.0%
TGAGGAAGCAAAAGGAACAA+AGG - chr1_3:16057348-16057367 Msa0106580:five_prime_UTR 40.0%
!! GCAGTCATTGCTATTTCAGT+TGG + chr1_3:16057572-16057591 None:intergenic 40.0%
CTGCACTTCAAGAAACACAA+TGG - chr1_3:16057588-16057607 Msa0106580:five_prime_UTR 40.0%
!! TTTGGTAATTGGTTAGCCTG+TGG + chr1_3:16057622-16057641 None:intergenic 40.0%
CTTTCAGAACTCAACTACCC+TGG - chr1_3:16052215-16052234 Msa0106580:three_prime_UTR 45.0%
GTTTCAGAACTGTGACTTCC+AGG + chr1_3:16052236-16052255 None:intergenic 45.0%
CTGTGAAAGTTGAGGAAGGA+AGG - chr1_3:16052327-16052346 Msa0106580:intron 45.0%
CTATAGACAGGACCTACTGA+TGG + chr1_3:16052374-16052393 None:intergenic 45.0%
!! TTCTGGTTTAGAGTCCCCTT+GGG - chr1_3:16052430-16052449 Msa0106580:intron 45.0%
TGACCTGAAGAAATCCCAAG+GGG + chr1_3:16052447-16052466 None:intergenic 45.0%
CTTAACAGAATCCCTGCCAA+AGG + chr1_3:16052764-16052783 None:intergenic 45.0%
TTGGCAGGGATTCTGTTAAG+AGG - chr1_3:16052764-16052783 Msa0106580:intron 45.0%
TTCCAAGCATCTGGTTGTTG+GGG + chr1_3:16052792-16052811 None:intergenic 45.0%
CTTCCAAGCATCTGGTTGTT+GGG + chr1_3:16052793-16052812 None:intergenic 45.0%
TTCAGGCAGGACCTTATTCA+TGG - chr1_3:16052962-16052981 Msa0106580:intron 45.0%
TTCTCATGGCTGATCCCATT+TGG + chr1_3:16053020-16053039 None:intergenic 45.0%
TGTTACTAGGGAGATCACTG+TGG - chr1_3:16053185-16053204 Msa0106580:CDS 45.0%
GGAGATCACTGTGGCATATA+TGG - chr1_3:16053194-16053213 Msa0106580:CDS 45.0%
! TGTGTCCAAAACTTCTGGAG+AGG + chr1_3:16053787-16053806 None:intergenic 45.0%
TCGTCTGTGTCCAAAACTTC+TGG + chr1_3:16053792-16053811 None:intergenic 45.0%
AAGAAGGAAGCCGAGGAATT+TGG - chr1_3:16054233-16054252 Msa0106580:intron 45.0%
TGGTCGTATACATGAGCAAG+TGG + chr1_3:16055035-16055054 None:intergenic 45.0%
GCCTTGCCAAAATCCTATTG+CGG + chr1_3:16055090-16055109 None:intergenic 45.0%
GTGTCTGAACATCTTCAAGC+AGG + chr1_3:16055218-16055237 None:intergenic 45.0%
!! AAAGGTGCTGCTTTGTGTTG+TGG + chr1_3:16055605-16055624 None:intergenic 45.0%
!! TAGACTAAACAAGCGTTGGG+TGG - chr1_3:16055725-16055744 Msa0106580:CDS 45.0%
AAACACTCCTCCACATGTAC+AGG + chr1_3:16055788-16055807 None:intergenic 45.0%
GTCTTACAGAAAGCTGTGCT+GGG - chr1_3:16056064-16056083 Msa0106580:intron 45.0%
! CGGCGATGTGTTTTCTATGA+TGG - chr1_3:16056101-16056120 Msa0106580:intron 45.0%
AATTCCCATGACAACCATCG+AGG - chr1_3:16056134-16056153 Msa0106580:intron 45.0%
GCTTGAATCTGTACCAGAGA+TGG - chr1_3:16056161-16056180 Msa0106580:intron 45.0%
TCACATGTGCCTCAATTGCT+AGG + chr1_3:16056328-16056347 None:intergenic 45.0%
TTGCAGGCGATATTGGAGAA+TGG - chr1_3:16056415-16056434 Msa0106580:CDS 45.0%
ATCCTCAAGAGCCTTTCTGT+CGG + chr1_3:16056723-16056742 None:intergenic 45.0%
ACAGAAAGGCTCTTGAGGAT+TGG - chr1_3:16056723-16056742 Msa0106580:intron 45.0%
CAGAAAGGCTCTTGAGGATT+GGG - chr1_3:16056724-16056743 Msa0106580:intron 45.0%
CTCTCTATGTCAAAGGGAGT+TGG + chr1_3:16057000-16057019 None:intergenic 45.0%
CAAATCGACGTTGCATCAGA+TGG + chr1_3:16057395-16057414 None:intergenic 45.0%
! AAGAGTTGCATCTGGAGTTG+CGG + chr1_3:16057493-16057512 None:intergenic 45.0%
CACAATGGTGTATGATCCAC+AGG - chr1_3:16057603-16057622 Msa0106580:five_prime_UTR 45.0%
TCTGATGGAAGGCCATCAGT+AGG - chr1_3:16052359-16052378 Msa0106580:intron 50.0%
! GGTCTTATGGAGTTGCCTTC+TGG - chr1_3:16052413-16052432 Msa0106580:intron 50.0%
CAAGGGGACTCTAAACCAGA+AGG + chr1_3:16052431-16052450 None:intergenic 50.0%
!! CTTCTGGTTTAGAGTCCCCT+TGG - chr1_3:16052429-16052448 Msa0106580:intron 50.0%
AGTCCCCTTGGGATTTCTTC+AGG - chr1_3:16052441-16052460 Msa0106580:intron 50.0%
CCTTCCAAGCATCTGGTTGT+TGG + chr1_3:16052794-16052813 None:intergenic 50.0%
CCAACAACCAGATGCTTGGA+AGG - chr1_3:16052791-16052810 Msa0106580:CDS 50.0%
TTTGACGCCTTCCAAGCATC+TGG + chr1_3:16052801-16052820 None:intergenic 50.0%
CATGGCTGATCCCATTTGGA+TGG + chr1_3:16053016-16053035 None:intergenic 50.0%
ATTGATGCCACGGCTTCTCA+TGG + chr1_3:16053034-16053053 None:intergenic 50.0%
AACTCACGGGATTGATGCCA+CGG + chr1_3:16053044-16053063 None:intergenic 50.0%
! ATGGTGCCAACTGTCCTGAA+TGG - chr1_3:16053213-16053232 Msa0106580:intron 50.0%
CCACAGCATTAGGACCTGTT+AGG + chr1_3:16053849-16053868 None:intergenic 50.0%
CCTAACAGGTCCTAATGCTG+TGG - chr1_3:16053846-16053865 Msa0106580:CDS 50.0%
! CTCGGCTTCCTTCTTTTGTG+TGG + chr1_3:16054228-16054247 None:intergenic 50.0%
CACACAAAAGAAGGAAGCCG+AGG - chr1_3:16054226-16054245 Msa0106580:intron 50.0%
GCAGGATGTGCCAAATTCCT+CGG + chr1_3:16054246-16054265 None:intergenic 50.0%
TGCGGGAATATACGACCATG+TGG - chr1_3:16054346-16054365 Msa0106580:CDS 50.0%
GGAACAACTGGAGAACCCAA+AGG - chr1_3:16054614-16054633 Msa0106580:CDS 50.0%
GGCAATAGGTCGCCATTATC+TGG + chr1_3:16055055-16055074 None:intergenic 50.0%
GCGACCTATTGCCTCTTCAA+GGG - chr1_3:16055062-16055081 Msa0106580:CDS 50.0%
! AGGGAGCCGCAATAGGATTT+TGG - chr1_3:16055081-16055100 Msa0106580:intron 50.0%
!! GCCGCAATAGGATTTTGGCA+AGG - chr1_3:16055086-16055105 Msa0106580:intron 50.0%
TGCACCTTTGCCTGTACATG+TGG - chr1_3:16055775-16055794 Msa0106580:intron 50.0%
ACCTTTGCCTGTACATGTGG+AGG - chr1_3:16055778-16055797 Msa0106580:intron 50.0%
TCCTCCACATGTACAGGCAA+AGG + chr1_3:16055782-16055801 None:intergenic 50.0%
GAGTGTTTGAGAGTCACCAG+TGG - chr1_3:16055800-16055819 Msa0106580:intron 50.0%
GGTCTTACAGAAAGCTGTGC+TGG - chr1_3:16056063-16056082 Msa0106580:intron 50.0%
GCTGGGTGTTTCACAGCAAT+CGG - chr1_3:16056081-16056100 Msa0106580:intron 50.0%
CTCTGGTACAGATTCAAGCC+TGG + chr1_3:16056160-16056179 None:intergenic 50.0%
AGTGCGTCATATCCCATCTC+TGG + chr1_3:16056177-16056196 None:intergenic 50.0%
CTCAGGCAAATTTCTCCACG+CGG + chr1_3:16056210-16056229 None:intergenic 50.0%
CGTGGAGAAATTTGCCTGAG+AGG - chr1_3:16056210-16056229 Msa0106580:intron 50.0%
GCGACAAGACCTTACTCAAG+AGG - chr1_3:16056260-16056279 Msa0106580:CDS 50.0%
! TGAGTCATTCTTGGTGGCTG+TGG - chr1_3:16056691-16056710 Msa0106580:intron 50.0%
TCCTCAAGAGCCTTTCTGTC+GGG + chr1_3:16056722-16056741 None:intergenic 50.0%
GGCATGAGTATAGTGTCCTG+TGG - chr1_3:16057369-16057388 Msa0106580:five_prime_UTR 50.0%
GGAAGGCCTGCTACATCTGA+TGG - chr1_3:16052344-16052363 Msa0106580:intron 55.0%
GGCCTGCTACATCTGATGGA+AGG - chr1_3:16052348-16052367 Msa0106580:intron 55.0%
GGCCTTCCATCAGATGTAGC+AGG + chr1_3:16052353-16052372 None:intergenic 55.0%
AGCCCCAACAACCAGATGCT+TGG - chr1_3:16052787-16052806 Msa0106580:CDS 55.0%
TTGGCACATCCTGCTTCTCC+TGG - chr1_3:16054252-16054271 Msa0106580:intron 55.0%
TGGCACATCCTGCTTCTCCT+GGG - chr1_3:16054253-16054272 Msa0106580:intron 55.0%
AAACTCTCCCCAGGAGAAGC+AGG + chr1_3:16054264-16054283 None:intergenic 55.0%
CAACTGGAGAAACTCTCCCC+AGG + chr1_3:16054273-16054292 None:intergenic 55.0%
CTGGGGAGAGTTTCTCCAGT+TGG - chr1_3:16054271-16054290 Msa0106580:intron 55.0%
TTAGTCCGCAGCCGCAATTG+TGG + chr1_3:16054420-16054439 None:intergenic 55.0%
GGCGACCTATTGCCTCTTCA+AGG - chr1_3:16055061-16055080 Msa0106580:CDS 55.0%
GGCTCCCTTGAAGAGGCAAT+AGG + chr1_3:16055069-16055088 None:intergenic 55.0%
CTATTGCGGCTCCCTTGAAG+AGG + chr1_3:16055076-16055095 None:intergenic 55.0%
CTCTTCAAGGGAGCCGCAAT+AGG - chr1_3:16055074-16055093 Msa0106580:intron 55.0%
CGCGTTCGTATCCTGCTATC+AGG - chr1_3:16055749-16055768 Msa0106580:CDS 55.0%
AAGGTGCAGCTCCTGATAGC+AGG + chr1_3:16055763-16055782 None:intergenic 55.0%
CTGGCCTCGATGGTTGTCAT+GGG + chr1_3:16056141-16056160 None:intergenic 55.0%
AGATTCAAGCCTGGCCTCGA+TGG + chr1_3:16056151-16056170 None:intergenic 55.0%
TGTGGTAGTCCCCGACAGAA+AGG - chr1_3:16056709-16056728 Msa0106580:intron 55.0%
CCTCAAGAGCCTTTCTGTCG+GGG + chr1_3:16056721-16056740 None:intergenic 55.0%
ACGTTGCATCAGATGGCCAC+AGG + chr1_3:16057388-16057407 None:intergenic 55.0%
GGATCAGCCATGAGAAGCCG+TGG - chr1_3:16053024-16053043 Msa0106580:intron 60.0%
GGCACATCCTGCTTCTCCTG+GGG - chr1_3:16054254-16054273 Msa0106580:intron 60.0%
TGTGGCCACAATTGCGGCTG+CGG - chr1_3:16054412-16054431 Msa0106580:CDS 60.0%
CCTGGCCTCGATGGTTGTCA+TGG + chr1_3:16056142-16056161 None:intergenic 60.0%
CCATGACAACCATCGAGGCC+AGG - chr1_3:16056139-16056158 Msa0106580:intron 60.0%
! GCACTTTCTAGTGAGCCGCG+TGG - chr1_3:16056192-16056211 Msa0106580:intron 60.0%
CCCCGACAGAAAGGCTCTTG+AGG - chr1_3:16056718-16056737 Msa0106580:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 16051984 16057653 16051984 ID=Msa0106580;Name=Msa0106580
chr1_3 mRNA 16051984 16057653 16051984 ID=Msa0106580-mRNA-1;Parent=Msa0106580;Name=Msa0106580-mRNA-1;_AED=0.14;_eAED=0.15;_QI=327|0.94|0.94|1|1|1|18|278|645
chr1_3 exon 16051984 16052309 16051984 ID=Msa0106580-mRNA-1:exon:6095;Parent=Msa0106580-mRNA-1
chr1_3 exon 16052560 16052679 16052560 ID=Msa0106580-mRNA-1:exon:6094;Parent=Msa0106580-mRNA-1
chr1_3 exon 16052787 16052969 16052787 ID=Msa0106580-mRNA-1:exon:6093;Parent=Msa0106580-mRNA-1
chr1_3 exon 16053077 16053216 16053077 ID=Msa0106580-mRNA-1:exon:6092;Parent=Msa0106580-mRNA-1
chr1_3 exon 16053328 16053573 16053328 ID=Msa0106580-mRNA-1:exon:6091;Parent=Msa0106580-mRNA-1
chr1_3 exon 16053792 16053909 16053792 ID=Msa0106580-mRNA-1:exon:6090;Parent=Msa0106580-mRNA-1
chr1_3 exon 16053988 16054076 16053988 ID=Msa0106580-mRNA-1:exon:6089;Parent=Msa0106580-mRNA-1
chr1_3 exon 16054346 16054433 16054346 ID=Msa0106580-mRNA-1:exon:6088;Parent=Msa0106580-mRNA-1
chr1_3 exon 16054528 16054644 16054528 ID=Msa0106580-mRNA-1:exon:6087;Parent=Msa0106580-mRNA-1
chr1_3 exon 16054925 16055089 16054925 ID=Msa0106580-mRNA-1:exon:6086;Parent=Msa0106580-mRNA-1
chr1_3 exon 16055345 16055439 16055345 ID=Msa0106580-mRNA-1:exon:6085;Parent=Msa0106580-mRNA-1
chr1_3 exon 16055543 16055582 16055543 ID=Msa0106580-mRNA-1:exon:6084;Parent=Msa0106580-mRNA-1
chr1_3 exon 16055707 16055783 16055707 ID=Msa0106580-mRNA-1:exon:6083;Parent=Msa0106580-mRNA-1
chr1_3 exon 16056236 16056284 16056236 ID=Msa0106580-mRNA-1:exon:6082;Parent=Msa0106580-mRNA-1
chr1_3 exon 16056387 16056443 16056387 ID=Msa0106580-mRNA-1:exon:6081;Parent=Msa0106580-mRNA-1
chr1_3 exon 16056581 16056670 16056581 ID=Msa0106580-mRNA-1:exon:6080;Parent=Msa0106580-mRNA-1
chr1_3 exon 16056803 16056866 16056803 ID=Msa0106580-mRNA-1:exon:6079;Parent=Msa0106580-mRNA-1
chr1_3 exon 16057175 16057653 16057175 ID=Msa0106580-mRNA-1:exon:6078;Parent=Msa0106580-mRNA-1
chr1_3 five_prime_UTR 16057327 16057653 16057327 ID=Msa0106580-mRNA-1:five_prime_utr;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16057175 16057326 16057175 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16056803 16056866 16056803 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16056581 16056670 16056581 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16056387 16056443 16056387 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16056236 16056284 16056236 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16055707 16055783 16055707 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16055543 16055582 16055543 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16055345 16055439 16055345 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16054925 16055089 16054925 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16054528 16054644 16054528 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16054346 16054433 16054346 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16053988 16054076 16053988 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16053792 16053909 16053792 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16053328 16053573 16053328 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16053077 16053216 16053077 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16052787 16052969 16052787 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16052560 16052679 16052560 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 CDS 16052262 16052309 16052262 ID=Msa0106580-mRNA-1:cds;Parent=Msa0106580-mRNA-1
chr1_3 three_prime_UTR 16051984 16052261 16051984 ID=Msa0106580-mRNA-1:three_prime_utr;Parent=Msa0106580-mRNA-1
Gene Sequence

>Msa0106580

ATGTCAGAGGTTTATACTGTGAAAGTTGAGGAAGGAAGGCCTGCTACATCTGATGGAAGGCCATCAGTAGGTCCTGTCTATAGATGCATTTATGCCAAAGATGGTCTTATGGAGTTGCCTTCTGGTTTAGAGTCCCCTTGGGATTTCTTCAGGGATTCTGTTAAGAGGAGCCCCAACAACCAGATGCTTGGAAGGCGTCAAAAACTCGATTCTAAGGCAGGACCTTATTCATGGCTCACATATAAAGAGGTTTATGATGTTTCCATCCAAATGGGATCAGCCATGAGAAGCCGTGGCATCAATCCCGGAGATCACTGTGGCATATATGGTGCCAACTGTCCTGAATGGATCATTGCAATGGAGGCTTGCAATAACTCTGCAGTAACATATGTTCCATTATATGATTCCCTTGGTCCTAATGCTGTGGAGTTTATCATAAACCATGCTGAAGTTTCAATTGCATTTGTACAGGAAAATAAGATTCCATCAATTTTGTCATGTCTTGATCAGTGTTCTTCAAATCTAAAAACTATTGTGAGCTTTGGAAATGTTTCTGCCACACAAAAGAAGGAAGCCGAGGAATTTGGCACATCCTGCTTCTCCTGGGGAGAGTTTCTCCAGTTGGGAAGTTTGGATTGGGATCTGCCACCAAAAAAGAAGACCGACATTTGCACAATAATGTACACAAGTGGAACAACTGGAGAACCCAAAGGTGTCATTATTAAGAATGAAGCTTTCATGTCTGAAGTGTTGTCTATTGACCAAATTATTAGGTTGACAGACAAAGTGGCAGCAGACGCAGACGACGATGTCTACTTCTCCTTTCTTCCACTTGCTCATGTATACGACCAGATAATGGCGACCTATTGCCTCTTCAAGGGAGCCGCAATAGGATTTTGGCAAGGCGATGTCAGGTTCCTGCTTGAAGATGTTCAGACACTGAAACCGACTATATTTTGTGGTGTTCCTAGAGTTTTCGATCGTATTAGTGCTGAATCCATTAACAGTAAGTTAAGATATCTAGAGAAGGGTCTTCCACAACACAAAGCAGCACCTTTCTTTGATAGACTTGTGTTTGATAAGACTAAACAAGCGTTGGGTGGACGCGTTCGTATCCTGCTATCAGGAGCTGCACCTTTGCCTGTACATGTGGAGGAGTGTTTGAGAGTCACCAGTGGATCCACATTATCACAAGGATATGGTCTTACAGAAAGCTGTGCTGGGTGTTTCACAGCAATCGGCGATGTGTTTTCTATGATGGGAACGGTTGGAATTCCCATGACAACCATCGAGGCCAGGCTTGAATCTGTACCAGAGATGGGATATGACGCACTTTCTAGTGAGCCGCGTGGAGAAATTTGCCTGAGAGGAAATTCCTTGTTCTCTGGTTATCACAAGCGACAAGACCTTACTCAAGAGGTTATAGTTGATGGTTGGTTTCATACAGGCGATATTGGAGAATGGCAACCAAATGGAGCCATGAAAATCATTGACAGAAAAAAGAATATCTTTAAATTATCTCAAGGAGAATACATTGCTGTAGAGAATATTGAAAGCAAGTATTTGCAATGCCCTCTTATATCATCGATTTGGGTATATGGAAACAGTTTTGAGTCATTCTTGGTGGCTGTGGTAGTCCCCGACAGAAAGGCTCTTGAGGATTGGGCAGTTGAGCACAATTTTAATGGTGACTACAAATCTTTATGTGAAAATCTAAAGGCAAGACAATACATTTTGGATGAGCTTAAAAGCACTGGTCAGAAACTCCAACTTAGAGGATTTGAGCAGCTCAAAGCTATTTATCTGGAACCAACTCCCTTTGACATAGAGAGAGATCTAGTAACTCCAACATTTAAATTGAAGAGACCACAATTACTGAAATACTACAAGGATCAAATTGATGAACTATATGAGGAAGCAAAAGGAACAAAGGCATGA
Protein sequence

>Msa0106580

MSEVYTVKVEEGRPATSDGRPSVGPVYRCIYAKDGLMELPSGLESPWDFFRDSVKRSPNNQMLGRRQKLDSKAGPYSWLTYKEVYDVSIQMGSAMRSRGINPGDHCGIYGANCPEWIIAMEACNNSAVTYVPLYDSLGPNAVEFIINHAEVSIAFVQENKIPSILSCLDQCSSNLKTIVSFGNVSATQKKEAEEFGTSCFSWGEFLQLGSLDWDLPPKKKTDICTIMYTSGTTGEPKGVIIKNEAFMSEVLSIDQIIRLTDKVAADADDDVYFSFLPLAHVYDQIMATYCLFKGAAIGFWQGDVRFLLEDVQTLKPTIFCGVPRVFDRISAESINSKLRYLEKGLPQHKAAPFFDRLVFDKTKQALGGRVRILLSGAAPLPVHVEECLRVTSGSTLSQGYGLTESCAGCFTAIGDVFSMMGTVGIPMTTIEARLESVPEMGYDALSSEPRGEICLRGNSLFSGYHKRQDLTQEVIVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIESKYLQCPLISSIWVYGNSFESFLVAVVVPDRKALEDWAVEHNFNGDYKSLCENLKARQYILDELKSTGQKLQLRGFEQLKAIYLEPTPFDIERDLVTPTFKLKRPQLLKYYKDQIDELYEEAKGTKA*