AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1107970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107970 MtrunA17_Chr7g0241831 98.193 498 9 0 1 498 1 498 0.0 1005
Msa1107970 MtrunA17_Chr4g0005991 84.444 495 75 2 3 496 1 494 0.0 841
Msa1107970 MtrunA17_Chr8g0348781 63.211 492 176 4 7 493 8 499 0.0 652
Msa1107970 MtrunA17_Chr1g0170421 55.984 493 211 3 11 498 42 533 0.0 566
Msa1107970 MtrunA17_Chr5g0435581 51.899 474 219 3 24 491 2 472 5.27e-164 473
Msa1107970 MtrunA17_Chr5g0443341 50.313 479 223 7 19 491 60 529 6.73e-156 454
Msa1107970 MtrunA17_Chr3g0096481 48.566 488 227 8 19 495 55 529 3.96e-153 447
Msa1107970 MtrunA17_Chr1g0194391 42.455 497 266 10 9 496 49 534 2.68e-123 371
Msa1107970 MtrunA17_Chr5g0425071 39.800 500 273 7 10 496 2 486 2.31e-117 354
Msa1107970 MtrunA17_Chr3g0096591 54.244 271 123 1 222 491 1 271 1.47e-101 305
Msa1107970 MtrunA17_Chr3g0096581 41.117 197 107 4 19 214 59 247 5.50e-41 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107970 AT2G38110.1 77.778 495 106 2 7 498 8 501 0.0 787
Msa1107970 AT4G00400.1 62.041 490 180 4 7 493 8 494 0.0 611
Msa1107970 AT1G01610.1 61.711 491 181 5 7 493 8 495 0.0 608
Msa1107970 AT3G11430.1 51.660 482 212 4 22 491 9 481 9.58e-165 476
Msa1107970 AT5G06090.1 48.560 486 229 4 18 491 3 479 5.27e-152 443
Msa1107970 AT1G06520.1 46.247 493 240 10 18 491 98 584 1.82e-143 424
Msa1107970 AT1G02390.1 38.086 512 284 11 8 494 27 530 6.17e-106 326
Msa1107970 AT4G01950.1 37.721 509 288 12 2 491 19 517 1.39e-102 317
Msa1107970 AT4G01950.2 37.721 509 288 12 2 491 47 545 2.42e-102 317
Msa1107970 AT3G11325.1 38.043 460 187 10 34 491 6 369 2.69e-87 273
Msa1107970 AT3G11325.2 38.043 460 187 10 34 491 9 372 2.91e-87 273

Find 132 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAAAACACATTAAATT+TGG 0.180394 7_3:+50416903 None:intergenic
TCAGTCTAATTTGCCTGATT+TGG 0.196119 7_3:-50420057 Msa1107970:CDS
TGGAATGTGTTCAATTCTTT+TGG 0.207233 7_3:-50420266 Msa1107970:CDS
CCACTAACTGTAAGCTCTTT+AGG 0.240056 7_3:+50417125 None:intergenic
GCATAATACTTTCCATCTTA+AGG 0.256062 7_3:-50417679 Msa1107970:CDS
CCCAGTTGCCCTTCCCGATT+TGG 0.258883 7_3:+50420142 None:intergenic
GAAAGTGCCACTGCTTTAAT+TGG 0.262083 7_3:+50417422 None:intergenic
TGGTACAATTATAAACTATT+AGG 0.266176 7_3:-50417620 Msa1107970:CDS
TCCTCTGCAGGAAGGGTATA+TGG 0.267172 7_3:-50417831 Msa1107970:intron
AGTGGATCACATTTAATTCT+TGG 0.268820 7_3:+50417806 None:intergenic
GGATTCATGAACACAAAATA+AGG 0.281571 7_3:+50417185 None:intergenic
CAGTCTAATTTGCCTGATTT+GGG 0.282394 7_3:-50420056 Msa1107970:CDS
AGGAGCCTGGTGTTCTTGTT+GGG 0.300559 7_3:-50420112 Msa1107970:CDS
ACCAAATCGGGAAGGGCAAC+TGG 0.300938 7_3:-50420143 Msa1107970:CDS
GAATTGTTGTACTTTGAAAT+TGG 0.303441 7_3:+50420584 None:intergenic
CATAATACTTTCCATCTTAA+GGG 0.319065 7_3:-50417678 Msa1107970:CDS
GGACTTAGAAGTTTAGTTCT+TGG 0.323980 7_3:+50417782 None:intergenic
GGAATCAAAGTTATTGTTAA+GGG 0.331113 7_3:-50417599 Msa1107970:CDS
TAGCCATAGGAATGATAATA+AGG 0.346790 7_3:+50417709 None:intergenic
TCCCTACAAGTTGTTCCTTC+CGG 0.348891 7_3:+50417332 None:intergenic
ATTCCCTTACTACATGCTTA+TGG 0.355427 7_3:-50420495 Msa1107970:CDS
CCTAAAGAGCTTACAGTTAG+TGG 0.359503 7_3:-50417125 Msa1107970:CDS
TATATTCAAAGGGTTCTTGC+TGG 0.360292 7_3:-50417074 Msa1107970:CDS
TTGGGAGGTGATAAGGTGAT+TGG 0.362715 7_3:-50420182 Msa1107970:CDS
AGGAATCAAAGTTATTGTTA+AGG 0.363421 7_3:-50417600 Msa1107970:CDS
GTGGTTACAGCAGTTGCATT+AGG 0.369985 7_3:-50417500 Msa1107970:CDS
CGATGGTTTCTGAGACAAAA+AGG 0.373974 7_3:+50420402 None:intergenic
ACGTCCTCAGCGTAGAATTT+CGG 0.374562 7_3:+50420302 None:intergenic
GCACCAAGAAAAGGTCAAAA+AGG 0.382407 7_3:-50417563 Msa1107970:CDS
GATAAGTATGCTATGCTTGC+TGG 0.385223 7_3:-50417014 Msa1107970:CDS
ATTAACCGATAGGATTGTTC+CGG 0.386364 7_3:-50417273 Msa1107970:CDS
AAGGAGCCTGGTGTTCTTGT+TGG 0.388349 7_3:-50420113 Msa1107970:CDS
GAATTTGTTGGGAGGTGATA+AGG 0.394560 7_3:-50420189 Msa1107970:CDS
AAGGGCAACTGGGTTTGTTA+AGG 0.407100 7_3:-50420132 Msa1107970:CDS
CCCAACAAATTCTTAACAAA+TGG 0.410137 7_3:+50420200 None:intergenic
TTGCCTTATTATCATTCCTA+TGG 0.412010 7_3:-50417712 Msa1107970:CDS
TAACTATATAGAATTCAAAA+AGG 0.412432 7_3:+50416926 None:intergenic
AAATGTGTTATGAGGAGAAA+AGG 0.414960 7_3:+50420701 None:intergenic
TGAAAGGGACGGAGAGTAAG+AGG 0.416211 7_3:+50420438 None:intergenic
TCTTAGAAAACTACCGGCTT+CGG 0.416812 7_3:+50420469 None:intergenic
AGGGTTCTTGCTGGAACACT+TGG 0.417445 7_3:-50417065 Msa1107970:CDS
ATAAATACTAACCTTGCAAA+TGG 0.421413 7_3:+50419998 None:intergenic
AATGATAATAAGGCAACAAT+AGG 0.421650 7_3:+50417719 None:intergenic
CCATTTGTTAAGAATTTGTT+GGG 0.427000 7_3:-50420200 Msa1107970:CDS
TGAACTTGAGGTGACCAAAT+CGG 0.429869 7_3:-50420156 Msa1107970:CDS
TTGTGATGATGCTCATGAAA+TGG 0.429921 7_3:-50416848 Msa1107970:three_prime_UTR
CTATCTCCCAGTCCCAAATC+AGG 0.435448 7_3:+50420044 None:intergenic
AGAAGTTTAGTTCTTGGTAG+TGG 0.438170 7_3:+50417788 None:intergenic
GAACTTGAGGTGACCAAATC+GGG 0.438703 7_3:-50420155 Msa1107970:CDS
TAATTTGCCTGATTTGGGAC+TGG 0.444415 7_3:-50420051 Msa1107970:CDS
ACTGGGTTTGTTAAGGAGCC+TGG 0.448681 7_3:-50420125 Msa1107970:CDS
ATGAGGAGAAAAGGAGAAGG+AGG 0.450194 7_3:+50420710 None:intergenic
GCCATTTGTTAAGAATTTGT+TGG 0.451477 7_3:-50420201 Msa1107970:CDS
AATTTGCCTGATTTGGGACT+GGG 0.452524 7_3:-50420050 Msa1107970:CDS
ATGGAAAGTATTATGCCAAT+TGG 0.452627 7_3:+50417686 None:intergenic
TGTTTCGTGTTAATTGCAAC+CGG 0.459361 7_3:+50417254 None:intergenic
CAGTGGCACTTTCAAGAGAA+AGG 0.461557 7_3:-50417412 Msa1107970:CDS
TGGGAGGTGATAAGGTGATT+GGG 0.468031 7_3:-50420181 Msa1107970:CDS
GCGCTGAACCGTAGAAGAAA+TGG 0.471044 7_3:+50417308 None:intergenic
TTGAACACATTCCACGTCTC+AGG 0.473991 7_3:+50420275 None:intergenic
GTTTAGGTATACCCTTAAGA+TGG 0.476258 7_3:+50417667 None:intergenic
TCATTCCTATGGCTACCAAT+TGG 0.476350 7_3:-50417701 Msa1107970:CDS
ATGCTTATGGCTACCGAAGC+CGG 0.481581 7_3:-50420482 Msa1107970:CDS
GTCCGGAAGGAACAACTTGT+AGG 0.482795 7_3:-50417334 Msa1107970:CDS
AGTGAATGAGGTATTTAGAA+TGG 0.488649 7_3:+50420674 None:intergenic
GTAGGGAACCATTTCTTCTA+CGG 0.489695 7_3:-50417316 Msa1107970:CDS
CACGGCTAGTCCAAGGTTGA+TGG 0.489858 7_3:-50420228 Msa1107970:CDS
CTAAGTCAGATGCAACGGTT+TGG 0.489913 7_3:+50420546 None:intergenic
TTTCTGGTAAGGGAATGTTT+AGG 0.490656 7_3:+50417651 None:intergenic
ACTTTGAAATTGGTTTGAAA+TGG 0.491494 7_3:+50420594 None:intergenic
ACCGTTGCATCTGACTTAGA+TGG 0.496852 7_3:-50420542 Msa1107970:CDS
TGCTTGCTGGTACAGATGGT+AGG 0.502496 7_3:-50417001 Msa1107970:CDS
TGAGGAGAAAAGGAGAAGGA+GGG 0.502630 7_3:+50420711 None:intergenic
AGTTGCAAATTATATTCAAA+GGG 0.504087 7_3:-50417084 Msa1107970:CDS
GTAGATTGAGGTTGAGAAGA+TGG 0.504374 7_3:+50420645 None:intergenic
AAGTTGCAAATTATATTCAA+AGG 0.504845 7_3:-50417085 Msa1107970:CDS
GGAGCCTGGTGTTCTTGTTG+GGG 0.507561 7_3:-50420111 Msa1107970:CDS
AATGGCTCCACCATCAACCT+TGG 0.511121 7_3:+50420218 None:intergenic
ATAAGGAAATTACTTGAAGA+AGG 0.512819 7_3:-50417371 Msa1107970:CDS
TTGATCTTCATAACCTTCGC+AGG 0.513177 7_3:-50420368 Msa1107970:CDS
GAGGAGAAAAGGAGAAGGAG+GGG 0.513481 7_3:+50420712 None:intergenic
GATTCATGAACACAAAATAA+GGG 0.515157 7_3:+50417186 None:intergenic
CCTCCACCAGCACCAAGAAA+AGG 0.516206 7_3:-50417572 Msa1107970:CDS
ACGTTGTCACGGCTAGTCCA+AGG 0.524082 7_3:-50420235 Msa1107970:CDS
TGACTTTATGTCCATTTGCA+AGG 0.526303 7_3:-50420009 Msa1107970:intron
GATTCCTCTTAGAAAACTAC+CGG 0.526617 7_3:+50420463 None:intergenic
GGTACGTGAAATATATGAAA+GGG 0.527101 7_3:+50420423 None:intergenic
GCTTGCTGGTACAGATGGTA+GGG 0.533473 7_3:-50417000 Msa1107970:CDS
TCCGGAAGGAACAACTTGTA+GGG 0.535613 7_3:-50417333 Msa1107970:CDS
ATGACGTGGAGATGGTTTCA+AGG 0.541289 7_3:-50420334 Msa1107970:CDS
AGTGGCACTTTCAAGAGAAA+GGG 0.541416 7_3:-50417411 Msa1107970:CDS
AAGAATGTGATCTCATAAGT+AGG 0.541733 7_3:+50417158 None:intergenic
GTAGCCATAAGCATGTAGTA+AGG 0.544461 7_3:+50420491 None:intergenic
GCTATGCTTGCTGGTACAGA+TGG 0.544625 7_3:-50417005 Msa1107970:CDS
AGATGGGTGTGTAGTGAATG+AGG 0.544655 7_3:+50420662 None:intergenic
TAGATTGAGGTTGAGAAGAT+GGG 0.545245 7_3:+50420646 None:intergenic
TGGTAGGGTTCCATCTAAGA+AGG 0.546476 7_3:-50416985 Msa1107970:CDS
GAAGATCAATGACGTGGAGA+TGG 0.550046 7_3:-50420342 Msa1107970:CDS
AGGTGACCTAGTGATTTGTC+CGG 0.552254 7_3:-50417351 Msa1107970:CDS
AGGTACGTGAAATATATGAA+AGG 0.567264 7_3:+50420422 None:intergenic
AGCTCCCCAACAAGAACACC+AGG 0.567606 7_3:+50420107 None:intergenic
AATGCAACTGCTGTAACCAC+AGG 0.568227 7_3:+50417503 None:intergenic
AATAAGGCAACAATAGGTGT+TGG 0.572028 7_3:+50417725 None:intergenic
GTGATCTCATAAGTAGGCAC+AGG 0.573493 7_3:+50417164 None:intergenic
GTTATGAGGAGAAAAGGAGA+AGG 0.577169 7_3:+50420707 None:intergenic
ATGGTTAGAAATGTGTTATG+AGG 0.582509 7_3:+50420693 None:intergenic
TGGAAAGCGTTACGTTGTCA+CGG 0.586333 7_3:-50420246 Msa1107970:CDS
CCAAATCGGGAAGGGCAACT+GGG 0.587982 7_3:-50420142 Msa1107970:CDS
TGAGGTGACCAAATCGGGAA+GGG 0.590584 7_3:-50420150 Msa1107970:CDS
AGGACGTGCGTCCTGAGACG+TGG 0.599900 7_3:-50420286 Msa1107970:CDS
CCATAAGAAAATGTAGATTG+AGG 0.600599 7_3:+50420633 None:intergenic
GGCTAGTCCAAGGTTGATGG+TGG 0.602655 7_3:-50420225 Msa1107970:CDS
GCCATCTAAGTCAGATGCAA+CGG 0.603277 7_3:+50420541 None:intergenic
TAGCCATAAGCATGTAGTAA+GGG 0.612096 7_3:+50420492 None:intergenic
TGCAACCGGAACAATCCTAT+CGG 0.612877 7_3:+50417268 None:intergenic
ATTGATCTTCAGACCTGCGA+AGG 0.614008 7_3:+50420355 None:intergenic
TTCCTTCCGGACAAATCACT+AGG 0.618250 7_3:+50417345 None:intergenic
AATTTCACCAATTAAAGCAG+TGG 0.621079 7_3:-50417429 Msa1107970:CDS
TTGAGGTGACCAAATCGGGA+AGG 0.622614 7_3:-50420151 Msa1107970:CDS
TTGAAGTAGAAAAGGGACAA+TGG 0.623971 7_3:-50416955 Msa1107970:exon
TTTGTTAAGAATTTGTTGGG+AGG 0.632297 7_3:-50420197 Msa1107970:CDS
TTGAGTGTACTAATTTAACA+AGG 0.633129 7_3:-50417040 Msa1107970:CDS
TTATGCCAATTGGTAGCCAT+AGG 0.634303 7_3:+50417696 None:intergenic
GGTCTAACACTTTGTGTCCG+CGG 0.647498 7_3:+50417207 None:intergenic
CGTGAAATATATGAAAGGGA+CGG 0.648172 7_3:+50420427 None:intergenic
AAAGAGCTTACAGTTAGTGG+AGG 0.649872 7_3:-50417122 Msa1107970:CDS
ATGCAACTGCTGTAACCACA+GGG 0.660790 7_3:+50417504 None:intergenic
CAGGGTCTAAAATTGTGCGA+TGG 0.669842 7_3:+50417522 None:intergenic
GACCTAGTGATTTGTCCGGA+AGG 0.669947 7_3:-50417347 Msa1107970:CDS
GGTGATTGGGACTGAACTTG+AGG 0.678672 7_3:-50420168 Msa1107970:CDS
AGGTCTGAAGATCAATGACG+TGG 0.721416 7_3:-50420348 Msa1107970:CDS
GTTGCCGAAATTCTACGCTG+AGG 0.727019 7_3:-50420306 Msa1107970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATATAATTTTAAATTT+TGG - chr7_3:50417959-50417978 Msa1107970:intron 0.0%
!! AAAATTATAAATTTAATTAA+GGG - chr7_3:50419201-50419220 Msa1107970:intron 0.0%
!! AGTTATATATGTATATATAA+GGG + chr7_3:50417883-50417902 None:intergenic 10.0%
!! TAGTTATATATGTATATATA+AGG + chr7_3:50417884-50417903 None:intergenic 10.0%
!! CTAAATTTAGAAATTAAATT+TGG + chr7_3:50418639-50418658 None:intergenic 10.0%
!!! CAAATTTAATTTCTAAATTT+AGG - chr7_3:50418637-50418656 Msa1107970:intron 10.0%
!! AATATATTTGAAGAAAAGTT+AGG + chr7_3:50417586-50417605 None:intergenic 15.0%
!! TTAATATATTTGTGTCTAAA+TGG + chr7_3:50417722-50417741 None:intergenic 15.0%
!! TATTAATTCCTTAATACTTT+AGG - chr7_3:50417994-50418013 Msa1107970:intron 15.0%
!!! TTCAACTTAATTTCTATTTT+CGG - chr7_3:50418195-50418214 Msa1107970:intron 15.0%
!! TCTAAATTTAAATTGATGTT+TGG - chr7_3:50418298-50418317 Msa1107970:intron 15.0%
!! AAAAAGAATAATACAATAGA+GGG + chr7_3:50418430-50418449 None:intergenic 15.0%
!! AAAAAAGAATAATACAATAG+AGG + chr7_3:50418431-50418450 None:intergenic 15.0%
!!! TCTTATAAATTTGTTTTGTA+AGG - chr7_3:50418820-50418839 Msa1107970:intron 15.0%
!! TAAACAATTATCAAAATGAA+TGG - chr7_3:50418980-50418999 Msa1107970:intron 15.0%
!! AAAATTGTAAACATTAAGTT+GGG + chr7_3:50419043-50419062 None:intergenic 15.0%
!! TAAAATTGTAAACATTAAGT+TGG + chr7_3:50419044-50419063 None:intergenic 15.0%
!! TAACTATATAGAATTCAAAA+AGG + chr7_3:50420605-50420624 None:intergenic 15.0%
!! ATTTGAAAACACATTAAATT+TGG + chr7_3:50420628-50420647 None:intergenic 15.0%
!! ATCACAACAAATGAAATAAA+TGG - chr7_3:50418123-50418142 Msa1107970:intron 20.0%
!! TTAAGAAAAGTTACTAAGAT+AGG + chr7_3:50418249-50418268 None:intergenic 20.0%
!! AAAAGAATAATACAATAGAG+GGG + chr7_3:50418429-50418448 None:intergenic 20.0%
!!! ATAAATAAGAGTATAGAGTA+TGG + chr7_3:50418484-50418503 None:intergenic 20.0%
!!! ATACTCTATACTCTTATTTA+TGG - chr7_3:50418483-50418502 Msa1107970:intron 20.0%
!! CTTATAACTCACAATAATTA+GGG + chr7_3:50418605-50418624 None:intergenic 20.0%
!! ACTTATAACTCACAATAATT+AGG + chr7_3:50418606-50418625 None:intergenic 20.0%
!!! TTCAACTTTAGAAAATATGA+TGG + chr7_3:50419179-50419198 None:intergenic 20.0%
!!! AGGGTTACAATTTTTAATTA+TGG - chr7_3:50419220-50419239 Msa1107970:intron 20.0%
!!! AATTTGAGACTTTAATCTAA+AGG + chr7_3:50419392-50419411 None:intergenic 20.0%
!! TTAAAGTCTCAAATTTACAT+AGG - chr7_3:50419397-50419416 Msa1107970:intron 20.0%
!! AAATATTGTAGTTAATGACT+TGG + chr7_3:50419677-50419696 None:intergenic 20.0%
!! TGGTACAATTATAAACTATT+AGG - chr7_3:50419908-50419927 Msa1107970:intron 20.0%
!! AAGTTGCAAATTATATTCAA+AGG - chr7_3:50420443-50420462 Msa1107970:CDS 20.0%
!! AGTTGCAAATTATATTCAAA+GGG - chr7_3:50420444-50420463 Msa1107970:CDS 20.0%
!!! ACTTTGAAATTGGTTTGAAA+TGG + chr7_3:50416937-50416956 None:intergenic 25.0%
!!! GAATTGTTGTACTTTGAAAT+TGG + chr7_3:50416947-50416966 None:intergenic 25.0%
!! TATGAAGATCAACATTTTGA+TGG + chr7_3:50417152-50417171 None:intergenic 25.0%
!! CCATTTGTTAAGAATTTGTT+GGG - chr7_3:50417328-50417347 Msa1107970:CDS 25.0%
! ATAAATACTAACCTTGCAAA+TGG + chr7_3:50417533-50417552 None:intergenic 25.0%
! GAAAAGTTAGGAACATATAT+AGG + chr7_3:50417574-50417593 None:intergenic 25.0%
!! TAATTTCTATTTTCGGAAGA+AGG - chr7_3:50418202-50418221 Msa1107970:intron 25.0%
! ATAGAAACAAAATATGGAAG+TGG + chr7_3:50418382-50418401 None:intergenic 25.0%
! GAGAGAATAGAAACAAAATA+TGG + chr7_3:50418388-50418407 None:intergenic 25.0%
!!! ATTTTGTTTCTATTCTCTCA+CGG - chr7_3:50418389-50418408 Msa1107970:intron 25.0%
!! TTGGATTTTATGTTCAAAGT+GGG + chr7_3:50418696-50418715 None:intergenic 25.0%
!! ATTGGATTTTATGTTCAAAG+TGG + chr7_3:50418697-50418716 None:intergenic 25.0%
! ATTAGACTCATGTAAAAGAT+AGG - chr7_3:50418848-50418867 Msa1107970:intron 25.0%
! AGTTATATGATGATAAGCTA+TGG + chr7_3:50418893-50418912 None:intergenic 25.0%
!!! CATTGAGCTTTAAATTTGTA+CGG + chr7_3:50418942-50418961 None:intergenic 25.0%
!! TAATTGAGCTAGTTTCTAAT+TGG + chr7_3:50419155-50419174 None:intergenic 25.0%
!! AAGTCCAATAATTTTTCATG+AGG - chr7_3:50419763-50419782 Msa1107970:intron 25.0%
!! AGTCCAATAATTTTTCATGA+GGG - chr7_3:50419764-50419783 Msa1107970:intron 25.0%
! AATGATAATAAGGCAACAAT+AGG + chr7_3:50419812-50419831 None:intergenic 25.0%
! CATAATACTTTCCATCTTAA+GGG - chr7_3:50419850-50419869 Msa1107970:intron 25.0%
! AGGAATCAAAGTTATTGTTA+AGG - chr7_3:50419928-50419947 Msa1107970:intron 25.0%
! GGAATCAAAGTTATTGTTAA+GGG - chr7_3:50419929-50419948 Msa1107970:intron 25.0%
! AAAAAGATGCAGCAAATATA+AGG - chr7_3:50420140-50420159 Msa1107970:CDS 25.0%
! ATAAGGAAATTACTTGAAGA+AGG - chr7_3:50420157-50420176 Msa1107970:CDS 25.0%
! GATTCATGAACACAAAATAA+GGG + chr7_3:50420345-50420364 None:intergenic 25.0%
! TTGAGTGTACTAATTTAACA+AGG - chr7_3:50420488-50420507 Msa1107970:CDS 25.0%
! AAAAAGCTTGAAGTAGAAAA+GGG - chr7_3:50420566-50420585 Msa1107970:CDS 25.0%
AAATGTGTTATGAGGAGAAA+AGG + chr7_3:50416830-50416849 None:intergenic 30.0%
ATGGTTAGAAATGTGTTATG+AGG + chr7_3:50416838-50416857 None:intergenic 30.0%
! AGTGAATGAGGTATTTAGAA+TGG + chr7_3:50416857-50416876 None:intergenic 30.0%
CCATAAGAAAATGTAGATTG+AGG + chr7_3:50416898-50416917 None:intergenic 30.0%
! CCTCAATCTACATTTTCTTA+TGG - chr7_3:50416895-50416914 Msa1107970:three_prime_UTR 30.0%
! TCTACATTTTCTTATGGTCA+TGG - chr7_3:50416901-50416920 Msa1107970:three_prime_UTR 30.0%
! CTACATTTTCTTATGGTCAT+GGG - chr7_3:50416902-50416921 Msa1107970:three_prime_UTR 30.0%
GGTACGTGAAATATATGAAA+GGG + chr7_3:50417108-50417127 None:intergenic 30.0%
AGGTACGTGAAATATATGAA+AGG + chr7_3:50417109-50417128 None:intergenic 30.0%
! TGGAATGTGTTCAATTCTTT+TGG - chr7_3:50417262-50417281 Msa1107970:CDS 30.0%
! GCCATTTGTTAAGAATTTGT+TGG - chr7_3:50417327-50417346 Msa1107970:CDS 30.0%
CCCAACAAATTCTTAACAAA+TGG + chr7_3:50417331-50417350 None:intergenic 30.0%
!! TTTGTTAAGAATTTGTTGGG+AGG - chr7_3:50417331-50417350 Msa1107970:CDS 30.0%
! TTTGTCCAAGATTTTCTTTG+AGG - chr7_3:50417663-50417682 Msa1107970:CDS 30.0%
! TTGTCCAAGATTTTCTTTGA+GGG - chr7_3:50417664-50417683 Msa1107970:CDS 30.0%
! TGTGATGTCCTAAAGTATTA+AGG + chr7_3:50418005-50418024 None:intergenic 30.0%
TGTTGTGATCTTAAAAACCA+TGG + chr7_3:50418112-50418131 None:intergenic 30.0%
AGAAAAGTTACTAAGATAGG+TGG + chr7_3:50418246-50418265 None:intergenic 30.0%
! ATAAGAGTATAGAGTATGGA+TGG + chr7_3:50418480-50418499 None:intergenic 30.0%
AATACAGAGTGGCATATAAA+GGG + chr7_3:50418526-50418545 None:intergenic 30.0%
AAATACAGAGTGGCATATAA+AGG + chr7_3:50418527-50418546 None:intergenic 30.0%
TAGGGTTTGAAAGTAGTTAA+GGG + chr7_3:50418587-50418606 None:intergenic 30.0%
TTAGGGTTTGAAAGTAGTTA+AGG + chr7_3:50418588-50418607 None:intergenic 30.0%
TCACGTTGAATGAGATTTAT+TGG - chr7_3:50418785-50418804 Msa1107970:intron 30.0%
CACGTTGAATGAGATTTATT+GGG - chr7_3:50418786-50418805 Msa1107970:intron 30.0%
ACGTTGAATGAGATTTATTG+GGG - chr7_3:50418787-50418806 Msa1107970:intron 30.0%
ATATGATGATAAGCTATGGT+GGG + chr7_3:50418889-50418908 None:intergenic 30.0%
TATATGATGATAAGCTATGG+TGG + chr7_3:50418890-50418909 None:intergenic 30.0%
! TTTTATATAGTTGTGCATGC+TGG - chr7_3:50419059-50419078 Msa1107970:intron 30.0%
AATTATTATCGTTGTCTACG+TGG + chr7_3:50419293-50419312 None:intergenic 30.0%
ATTTACATAGGTGAGAATAG+AGG - chr7_3:50419409-50419428 Msa1107970:intron 30.0%
TTTACATAGGTGAGAATAGA+GGG - chr7_3:50419410-50419429 Msa1107970:intron 30.0%
AGTGGATCACATTTAATTCT+TGG + chr7_3:50419725-50419744 None:intergenic 30.0%
CTACCCTCATGAAAAATTAT+TGG + chr7_3:50419770-50419789 None:intergenic 30.0%
! TTGCCTTATTATCATTCCTA+TGG - chr7_3:50419816-50419835 Msa1107970:intron 30.0%
TAGCCATAGGAATGATAATA+AGG + chr7_3:50419822-50419841 None:intergenic 30.0%
!! ATGGAAAGTATTATGCCAAT+TGG + chr7_3:50419845-50419864 None:intergenic 30.0%
GCATAATACTTTCCATCTTA+AGG - chr7_3:50419849-50419868 Msa1107970:intron 30.0%
!!! CAAGCAATTTTTTCTGGTAA+GGG + chr7_3:50419890-50419909 None:intergenic 30.0%
!!! TTGTACCAAGCAATTTTTTC+TGG + chr7_3:50419896-50419915 None:intergenic 30.0%
AATTTCACCAATTAAAGCAG+TGG - chr7_3:50420099-50420118 Msa1107970:CDS 30.0%
! ACGAAACAAAGTGTGTTTTA+TGG - chr7_3:50420289-50420308 Msa1107970:CDS 30.0%
! AAGTGTGTTTTATGGTACAA+CGG - chr7_3:50420297-50420316 Msa1107970:CDS 30.0%
GGATTCATGAACACAAAATA+AGG + chr7_3:50420346-50420365 None:intergenic 30.0%
AAGAATGTGATCTCATAAGT+AGG + chr7_3:50420373-50420392 None:intergenic 30.0%
GAAAAAGCTTGAAGTAGAAA+AGG - chr7_3:50420565-50420584 Msa1107970:CDS 30.0%
!! AGGGGTTTTTAAAAGGAGTT+GGG + chr7_3:50416801-50416820 None:intergenic 35.0%
TAGATTGAGGTTGAGAAGAT+GGG + chr7_3:50416885-50416904 None:intergenic 35.0%
ATTCCCTTACTACATGCTTA+TGG - chr7_3:50417033-50417052 Msa1107970:CDS 35.0%
TAGCCATAAGCATGTAGTAA+GGG + chr7_3:50417039-50417058 None:intergenic 35.0%
GATTCCTCTTAGAAAACTAC+CGG + chr7_3:50417068-50417087 None:intergenic 35.0%
CGTGAAATATATGAAAGGGA+CGG + chr7_3:50417104-50417123 None:intergenic 35.0%
! TCAGTCTAATTTGCCTGATT+TGG - chr7_3:50417471-50417490 Msa1107970:CDS 35.0%
! CAGTCTAATTTGCCTGATTT+GGG - chr7_3:50417472-50417491 Msa1107970:CDS 35.0%
TGACTTTATGTCCATTTGCA+AGG - chr7_3:50417519-50417538 Msa1107970:CDS 35.0%
AACACCCTCAAAGAAAATCT+TGG + chr7_3:50417671-50417690 None:intergenic 35.0%
ATCTTAACGTTGTACAGTTG+TGG - chr7_3:50418085-50418104 Msa1107970:intron 35.0%
!! TAGGTGGATTGAGTCATAAT+TGG + chr7_3:50418230-50418249 None:intergenic 35.0%
TGACTATGACATGTTGCTAT+TGG - chr7_3:50418333-50418352 Msa1107970:intron 35.0%
AAAATATGGAAGTGGAAGAG+AGG + chr7_3:50418374-50418393 None:intergenic 35.0%
AATATTTACCACCATGCATG+TGG - chr7_3:50418453-50418472 Msa1107970:intron 35.0%
TACTCAACTGAAATACAGAG+TGG + chr7_3:50418537-50418556 None:intergenic 35.0%
AACATGGGCAACAAAATACA+AGG + chr7_3:50418720-50418739 None:intergenic 35.0%
TGCCCATGTTAAAGATACAA+CGG - chr7_3:50418730-50418749 Msa1107970:intron 35.0%
CACCGTTGTATCTTTAACAT+GGG + chr7_3:50418735-50418754 None:intergenic 35.0%
ACACCGTTGTATCTTTAACA+TGG + chr7_3:50418736-50418755 None:intergenic 35.0%
ATCTTCCTATACTCAACCAA+GGG - chr7_3:50419008-50419027 Msa1107970:intron 35.0%
!! GTAAACATTAAGTTGGGACA+TGG + chr7_3:50419037-50419056 None:intergenic 35.0%
CAAACCAAAATTCTTGGTCA+TGG + chr7_3:50419453-50419472 None:intergenic 35.0%
!!! CATGACCAAGAATTTTGGTT+TGG - chr7_3:50419451-50419470 Msa1107970:intron 35.0%
TGTGACCAAACCAAAATTCT+TGG + chr7_3:50419551-50419570 None:intergenic 35.0%
TGTGACCAAACCAAAATTCT+TGG - chr7_3:50419551-50419570 Msa1107970:intron 35.0%
!!! CAAGACCAAGAATTTTGGTT+TGG + chr7_3:50419559-50419578 None:intergenic 35.0%
CAAACCAAAATTCTTGGTCT+TGG - chr7_3:50419557-50419576 Msa1107970:intron 35.0%
CTATTCGAGAAAATCTTGTG+TGG + chr7_3:50419584-50419603 None:intergenic 35.0%
! CACAAGATTTTCTCGAATAG+AGG - chr7_3:50419584-50419603 Msa1107970:intron 35.0%
! ACTACAATATTTTCCTCTGC+AGG - chr7_3:50419685-50419704 Msa1107970:intron 35.0%
! AATATTTTCCTCTGCAGGAA+GGG - chr7_3:50419690-50419709 Msa1107970:intron 35.0%
!! AGAAGTTTAGTTCTTGGTAG+TGG + chr7_3:50419743-50419762 None:intergenic 35.0%
!! GGACTTAGAAGTTTAGTTCT+TGG + chr7_3:50419749-50419768 None:intergenic 35.0%
AATAAGGCAACAATAGGTGT+TGG + chr7_3:50419806-50419825 None:intergenic 35.0%
GTTTAGGTATACCCTTAAGA+TGG + chr7_3:50419864-50419883 None:intergenic 35.0%
! TTTCTGGTAAGGGAATGTTT+AGG + chr7_3:50419880-50419899 None:intergenic 35.0%
!!! CCAAGCAATTTTTTCTGGTA+AGG + chr7_3:50419891-50419910 None:intergenic 35.0%
CCTTACCAGAAAAAATTGCT+TGG - chr7_3:50419888-50419907 Msa1107970:intron 35.0%
! ACACCTTTTTGACCTTTTCT+TGG + chr7_3:50419971-50419990 None:intergenic 35.0%
! TTTTCGCTGAATTAACCGAT+AGG - chr7_3:50420245-50420264 Msa1107970:CDS 35.0%
ATTAACCGATAGGATTGTTC+CGG - chr7_3:50420255-50420274 Msa1107970:CDS 35.0%
TGTTTCGTGTTAATTGCAAC+CGG + chr7_3:50420277-50420296 None:intergenic 35.0%
TATATTCAAAGGGTTCTTGC+TGG - chr7_3:50420454-50420473 Msa1107970:CDS 35.0%
!! CAAGCTTTTTCCTTCTTAGA+TGG + chr7_3:50420556-50420575 None:intergenic 35.0%
TTGAAGTAGAAAAGGGACAA+TGG - chr7_3:50420573-50420592 Msa1107970:CDS 35.0%
! TTGTGATGATGCTCATGAAA+TGG - chr7_3:50420680-50420699 Msa1107970:five_prime_UTR 35.0%
!! GGTTTTTAAAAGGAGTTGGG+GGG + chr7_3:50416798-50416817 None:intergenic 40.0%
!! GGGTTTTTAAAAGGAGTTGG+GGG + chr7_3:50416799-50416818 None:intergenic 40.0%
!! GGGGTTTTTAAAAGGAGTTG+GGG + chr7_3:50416800-50416819 None:intergenic 40.0%
!! GAGGGGTTTTTAAAAGGAGT+TGG + chr7_3:50416802-50416821 None:intergenic 40.0%
! GAGAAGGAGGGGTTTTTAAA+AGG + chr7_3:50416808-50416827 None:intergenic 40.0%
GTTATGAGGAGAAAAGGAGA+AGG + chr7_3:50416824-50416843 None:intergenic 40.0%
GTAGATTGAGGTTGAGAAGA+TGG + chr7_3:50416886-50416905 None:intergenic 40.0%
GTAGCCATAAGCATGTAGTA+AGG + chr7_3:50417040-50417059 None:intergenic 40.0%
!! TCTTAGAAAACTACCGGCTT+CGG + chr7_3:50417062-50417081 None:intergenic 40.0%
!! CGATGGTTTCTGAGACAAAA+AGG + chr7_3:50417129-50417148 None:intergenic 40.0%
!!! GATCAACATTTTGATGGCGA+TGG + chr7_3:50417146-50417165 None:intergenic 40.0%
TTGATCTTCATAACCTTCGC+AGG - chr7_3:50417160-50417179 Msa1107970:CDS 40.0%
!! GAATTTGTTGGGAGGTGATA+AGG - chr7_3:50417339-50417358 Msa1107970:CDS 40.0%
TGAACTTGAGGTGACCAAAT+CGG - chr7_3:50417372-50417391 Msa1107970:CDS 40.0%
!! TAATTTGCCTGATTTGGGAC+TGG - chr7_3:50417477-50417496 Msa1107970:CDS 40.0%
!! AATTTGCCTGATTTGGGACT+GGG - chr7_3:50417478-50417497 Msa1107970:CDS 40.0%
GGGCAACAAAATACAAGGAT+TGG + chr7_3:50418715-50418734 None:intergenic 40.0%
GATCTTCCTATACTCAACCA+AGG - chr7_3:50419007-50419026 Msa1107970:intron 40.0%
! TGGACCATGACCAAGAATTT+TGG - chr7_3:50419446-50419465 Msa1107970:intron 40.0%
! TGGACCAAGACCAAGAATTT+TGG + chr7_3:50419564-50419583 None:intergenic 40.0%
! CAATATTTTCCTCTGCAGGA+AGG - chr7_3:50419689-50419708 Msa1107970:intron 40.0%
TCATTCCTATGGCTACCAAT+TGG - chr7_3:50419827-50419846 Msa1107970:intron 40.0%
! TTATGCCAATTGGTAGCCAT+AGG + chr7_3:50419835-50419854 None:intergenic 40.0%
!! TTTTGACCTTTTCTTGGTGC+TGG + chr7_3:50419965-50419984 None:intergenic 40.0%
GCACCAAGAAAAGGTCAAAA+AGG - chr7_3:50419965-50419984 Msa1107970:intron 40.0%
!! GAAAGTGCCACTGCTTTAAT+TGG + chr7_3:50420109-50420128 None:intergenic 40.0%
AGTGGCACTTTCAAGAGAAA+GGG - chr7_3:50420117-50420136 Msa1107970:CDS 40.0%
GTAGGGAACCATTTCTTCTA+CGG - chr7_3:50420212-50420231 Msa1107970:CDS 40.0%
CCACTAACTGTAAGCTCTTT+AGG + chr7_3:50420406-50420425 None:intergenic 40.0%
CCTAAAGAGCTTACAGTTAG+TGG - chr7_3:50420403-50420422 Msa1107970:CDS 40.0%
AAAGAGCTTACAGTTAGTGG+AGG - chr7_3:50420406-50420425 Msa1107970:CDS 40.0%
GATAAGTATGCTATGCTTGC+TGG - chr7_3:50420514-50420533 Msa1107970:CDS 40.0%
TGAGGAGAAAAGGAGAAGGA+GGG + chr7_3:50416820-50416839 None:intergenic 45.0%
ATGAGGAGAAAAGGAGAAGG+AGG + chr7_3:50416821-50416840 None:intergenic 45.0%
AGATGGGTGTGTAGTGAATG+AGG + chr7_3:50416869-50416888 None:intergenic 45.0%
CTAAGTCAGATGCAACGGTT+TGG + chr7_3:50416985-50417004 None:intergenic 45.0%
ACCGTTGCATCTGACTTAGA+TGG - chr7_3:50416986-50417005 Msa1107970:CDS 45.0%
GCCATCTAAGTCAGATGCAA+CGG + chr7_3:50416990-50417009 None:intergenic 45.0%
! GAAGCCGGTAGTTTTCTAAG+AGG - chr7_3:50417061-50417080 Msa1107970:CDS 45.0%
ATTGATCTTCAGACCTGCGA+AGG + chr7_3:50417176-50417195 None:intergenic 45.0%
AGGTCTGAAGATCAATGACG+TGG - chr7_3:50417180-50417199 Msa1107970:CDS 45.0%
GAAGATCAATGACGTGGAGA+TGG - chr7_3:50417186-50417205 Msa1107970:CDS 45.0%
ATGACGTGGAGATGGTTTCA+AGG - chr7_3:50417194-50417213 Msa1107970:CDS 45.0%
ACGTCCTCAGCGTAGAATTT+CGG + chr7_3:50417229-50417248 None:intergenic 45.0%
TTGAACACATTCCACGTCTC+AGG + chr7_3:50417256-50417275 None:intergenic 45.0%
!! TGGAAAGCGTTACGTTGTCA+CGG - chr7_3:50417282-50417301 Msa1107970:CDS 45.0%
TTGGGAGGTGATAAGGTGAT+TGG - chr7_3:50417346-50417365 Msa1107970:CDS 45.0%
TGGGAGGTGATAAGGTGATT+GGG - chr7_3:50417347-50417366 Msa1107970:CDS 45.0%
GAACTTGAGGTGACCAAATC+GGG - chr7_3:50417373-50417392 Msa1107970:CDS 45.0%
!! AAGGGCAACTGGGTTTGTTA+AGG - chr7_3:50417396-50417415 Msa1107970:CDS 45.0%
! ATGACATGTTGCTATTGGCC+TGG - chr7_3:50418338-50418357 Msa1107970:intron 45.0%
AGTGGAAGAGAGGCTCATTA+TGG + chr7_3:50418364-50418383 None:intergenic 45.0%
GGATTCCCTTGGTTGAGTAT+AGG + chr7_3:50419016-50419035 None:intergenic 45.0%
TATCGTTGTCTACGTGGTGT+CGG + chr7_3:50419287-50419306 None:intergenic 45.0%
TAGAGGGAGAAACACTTGTG+TGG - chr7_3:50419426-50419445 Msa1107970:intron 45.0%
GAGAGAAGAGAAGAGAGAGA+AGG + chr7_3:50419493-50419512 None:intergenic 45.0%
! CAGGGTCTAAAATTGTGCGA+TGG + chr7_3:50420009-50420028 None:intergenic 45.0%
! TCGCACAATTTTAGACCCTG+TGG - chr7_3:50420009-50420028 Msa1107970:intron 45.0%
ATGCAACTGCTGTAACCACA+GGG + chr7_3:50420027-50420046 None:intergenic 45.0%
AATGCAACTGCTGTAACCAC+AGG + chr7_3:50420028-50420047 None:intergenic 45.0%
GTGGTTACAGCAGTTGCATT+AGG - chr7_3:50420028-50420047 Msa1107970:CDS 45.0%
CAGTGGCACTTTCAAGAGAA+AGG - chr7_3:50420116-50420135 Msa1107970:CDS 45.0%
! AGGTGACCTAGTGATTTGTC+CGG - chr7_3:50420177-50420196 Msa1107970:CDS 45.0%
TTCCTTCCGGACAAATCACT+AGG + chr7_3:50420186-50420205 None:intergenic 45.0%
TCCGGAAGGAACAACTTGTA+GGG - chr7_3:50420195-50420214 Msa1107970:CDS 45.0%
TCCCTACAAGTTGTTCCTTC+CGG + chr7_3:50420199-50420218 None:intergenic 45.0%
TGCAACCGGAACAATCCTAT+CGG + chr7_3:50420263-50420282 None:intergenic 45.0%
! TTTTATGGTACAACGGTCCG+CGG - chr7_3:50420304-50420323 Msa1107970:CDS 45.0%
GTGATCTCATAAGTAGGCAC+AGG + chr7_3:50420367-50420386 None:intergenic 45.0%
TGGTAGGGTTCCATCTAAGA+AGG - chr7_3:50420543-50420562 Msa1107970:CDS 45.0%
!!! AAATTTAATTTCTAAATTTA+GGG - chr7_3:50418638-50418657 Msa1107970:intron 5.0%
!! GAAAATTATAAATTTAATTA+AGG - chr7_3:50419200-50419219 Msa1107970:intron 5.0%
GAGGAGAAAAGGAGAAGGAG+GGG + chr7_3:50416819-50416838 None:intergenic 50.0%
ATGCTTATGGCTACCGAAGC+CGG - chr7_3:50417046-50417065 Msa1107970:CDS 50.0%
TGAAAGGGACGGAGAGTAAG+AGG + chr7_3:50417093-50417112 None:intergenic 50.0%
GTTGCCGAAATTCTACGCTG+AGG - chr7_3:50417222-50417241 Msa1107970:CDS 50.0%
AATGGCTCCACCATCAACCT+TGG + chr7_3:50417313-50417332 None:intergenic 50.0%
GGTGATTGGGACTGAACTTG+AGG - chr7_3:50417360-50417379 Msa1107970:CDS 50.0%
TTGAGGTGACCAAATCGGGA+AGG - chr7_3:50417377-50417396 Msa1107970:CDS 50.0%
TGAGGTGACCAAATCGGGAA+GGG - chr7_3:50417378-50417397 Msa1107970:CDS 50.0%
!! ACTGGGTTTGTTAAGGAGCC+TGG - chr7_3:50417403-50417422 Msa1107970:CDS 50.0%
AAGGAGCCTGGTGTTCTTGT+TGG - chr7_3:50417415-50417434 Msa1107970:CDS 50.0%
AGGAGCCTGGTGTTCTTGTT+GGG - chr7_3:50417416-50417435 Msa1107970:CDS 50.0%
CTATCTCCCAGTCCCAAATC+AGG + chr7_3:50417487-50417506 None:intergenic 50.0%
CGTTGTACAGTTGTGGACCA+TGG - chr7_3:50418092-50418111 Msa1107970:intron 50.0%
AAGAGAGGCTCATTATGGCC+AGG + chr7_3:50418359-50418378 None:intergenic 50.0%
GTATGGATGGACCACATGCA+TGG + chr7_3:50418467-50418486 None:intergenic 50.0%
AGTTGGGACATGGATTCCCT+TGG + chr7_3:50419027-50419046 None:intergenic 50.0%
! TCCTCTGCAGGAAGGGTATA+TGG - chr7_3:50419697-50419716 Msa1107970:intron 50.0%
ACCATATACCCTTCCTGCAG+AGG + chr7_3:50419701-50419720 None:intergenic 50.0%
!!! TTTTCTTGGTGCTGGTGGAG+GGG + chr7_3:50419957-50419976 None:intergenic 50.0%
!!! CTTTTCTTGGTGCTGGTGGA+GGG + chr7_3:50419958-50419977 None:intergenic 50.0%
!!! TGACCTTTTCTTGGTGCTGG+TGG + chr7_3:50419962-50419981 None:intergenic 50.0%
! GACCTAGTGATTTGTCCGGA+AGG - chr7_3:50420181-50420200 Msa1107970:CDS 50.0%
GTCCGGAAGGAACAACTTGT+AGG - chr7_3:50420194-50420213 Msa1107970:CDS 50.0%
GCGCTGAACCGTAGAAGAAA+TGG + chr7_3:50420223-50420242 None:intergenic 50.0%
GGTCTAACACTTTGTGTCCG+CGG + chr7_3:50420324-50420343 None:intergenic 50.0%
AGGGTTCTTGCTGGAACACT+TGG - chr7_3:50420463-50420482 Msa1107970:CDS 50.0%
! GCTATGCTTGCTGGTACAGA+TGG - chr7_3:50420523-50420542 Msa1107970:CDS 50.0%
! TGCTTGCTGGTACAGATGGT+AGG - chr7_3:50420527-50420546 Msa1107970:CDS 50.0%
! GCTTGCTGGTACAGATGGTA+GGG - chr7_3:50420528-50420547 Msa1107970:CDS 50.0%
! ACGTTGTCACGGCTAGTCCA+AGG - chr7_3:50417293-50417312 Msa1107970:CDS 55.0%
! CACGGCTAGTCCAAGGTTGA+TGG - chr7_3:50417300-50417319 Msa1107970:CDS 55.0%
!! GGCTAGTCCAAGGTTGATGG+TGG - chr7_3:50417303-50417322 Msa1107970:CDS 55.0%
ACCAAATCGGGAAGGGCAAC+TGG - chr7_3:50417385-50417404 Msa1107970:CDS 55.0%
CCAAATCGGGAAGGGCAACT+GGG - chr7_3:50417386-50417405 Msa1107970:CDS 55.0%
GGAGCCTGGTGTTCTTGTTG+GGG - chr7_3:50417417-50417436 Msa1107970:CDS 55.0%
AGCTCCCCAACAAGAACACC+AGG + chr7_3:50417424-50417443 None:intergenic 55.0%
TGGATGGACCACATGCATGG+TGG + chr7_3:50418464-50418483 None:intergenic 55.0%
!!! CCTTTTCTTGGTGCTGGTGG+AGG + chr7_3:50419959-50419978 None:intergenic 55.0%
CCTCCACCAGCACCAAGAAA+AGG - chr7_3:50419956-50419975 Msa1107970:intron 55.0%
CCCAGTTGCCCTTCCCGATT+TGG + chr7_3:50417389-50417408 None:intergenic 60.0%
AGGACGTGCGTCCTGAGACG+TGG - chr7_3:50417242-50417261 Msa1107970:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 50416786 50420764 50416786 ID=Msa1107970;Name=Msa1107970
chr7_3 mRNA 50416786 50420764 50416786 ID=Msa1107970-mRNA-1;Parent=Msa1107970;Name=Msa1107970-mRNA-1;_AED=0.09;_eAED=0.09;_QI=128|1|1|1|1|1|2|188|498
chr7_3 exon 50416786 50417843 50416786 ID=Msa1107970-mRNA-1:exon:10326;Parent=Msa1107970-mRNA-1
chr7_3 exon 50420010 50420764 50420010 ID=Msa1107970-mRNA-1:exon:10325;Parent=Msa1107970-mRNA-1
chr7_3 five_prime_UTR 50420637 50420764 50420637 ID=Msa1107970-mRNA-1:five_prime_utr;Parent=Msa1107970-mRNA-1
chr7_3 CDS 50420010 50420636 50420010 ID=Msa1107970-mRNA-1:cds;Parent=Msa1107970-mRNA-1
chr7_3 CDS 50416974 50417843 50416974 ID=Msa1107970-mRNA-1:cds;Parent=Msa1107970-mRNA-1
chr7_3 three_prime_UTR 50416786 50416973 50416786 ID=Msa1107970-mRNA-1:three_prime_utr;Parent=Msa1107970-mRNA-1
Gene Sequence

>Msa1107970

ATGGTCATGGGAGCATTTCACCATTTCAAACCAATTTCAAAGTACAACAATTCACAAGATAAATCAAACCAAACCGTTGCATCTGACTTAGATGGCACACTTCTTGTATCTAGAGATGCATTCCCTTACTACATGCTTATGGCTACCGAAGCCGGTAGTTTTCTAAGAGGAATCATCCTCTTACTCTCCGTCCCTTTCATATATTTCACGTACCTTTTTGTCTCAGAAACCATCGCCATCAAAATGTTGATCTTCATAACCTTCGCAGGTCTGAAGATCAATGACGTGGAGATGGTTTCAAGGTCAGTGTTGCCGAAATTCTACGCTGAGGACGTGCGTCCTGAGACGTGGAATGTGTTCAATTCTTTTGGAAAGCGTTACGTTGTCACGGCTAGTCCAAGGTTGATGGTGGAGCCATTTGTTAAGAATTTGTTGGGAGGTGATAAGGTGATTGGGACTGAACTTGAGGTGACCAAATCGGGAAGGGCAACTGGGTTTGTTAAGGAGCCTGGTGTTCTTGTTGGGGAGCTCAAGAAAGATGCTGTTGTCAAAGAGTTTCAGTCTAATTTGCCTGATTTGGGACTGGGAGATAGTGAAAGTGATCATGACTTTATGTCCATTTGCAAGGAAGGGTATATGGTTCCAAGAATTAAATGTGATCCACTACCAAGAACTAAACTTCTAAGTCCAATAATTTTTCATGAGGGTAGATTTGTTCAACGACCAACACCTATTGTTGCCTTATTATCATTCCTATGGCTACCAATTGGCATAATACTTTCCATCTTAAGGGTATACCTAAACATTCCCTTACCAGAAAAAATTGCTTGGTACAATTATAAACTATTAGGAATCAAAGTTATTGTTAAGGGCACCCCTCCACCAGCACCAAGAAAAGGTCAAAAAGGTGTACTATTTGTGTGTAACCATCGCACAATTTTAGACCCTGTGGTTACAGCAGTTGCATTAGGAAGAAAAATTAGTTGTGTCACATATAGTATTAGTAAATTTAGTGAAATAATTTCACCAATTAAAGCAGTGGCACTTTCAAGAGAAAGGGAAAAAGATGCAGCAAATATAAGGAAATTACTTGAAGAAGGTGACCTAGTGATTTGTCCGGAAGGAACAACTTGTAGGGAACCATTTCTTCTACGGTTCAGCGCGCTTTTCGCTGAATTAACCGATAGGATTGTTCCGGTTGCAATTAACACGAAACAAAGTGTGTTTTATGGTACAACGGTCCGCGGACACAAAGTGTTAGACCCTTATTTTGTGTTCATGAATCCTGTGCCTACTTATGAGATCACATTCTTGAATCAACTTCCTAAAGAGCTTACAGTTAGTGGAGGAAAATCTGCTATTGAAGTTGCAAATTATATTCAAAGGGTTCTTGCTGGAACACTTGGATTTGAGTGTACTAATTTAACAAGGAAAGATAAGTATGCTATGCTTGCTGGTACAGATGGTAGGGTTCCATCTAAGAAGGAAAAAGCTTGA

Protein sequence

>Msa1107970

MVMGAFHHFKPISKYNNSQDKSNQTVASDLDGTLLVSRDAFPYYMLMATEAGSFLRGIILLLSVPFIYFTYLFVSETIAIKMLIFITFAGLKINDVEMVSRSVLPKFYAEDVRPETWNVFNSFGKRYVVTASPRLMVEPFVKNLLGGDKVIGTELEVTKSGRATGFVKEPGVLVGELKKDAVVKEFQSNLPDLGLGDSESDHDFMSICKEGYMVPRIKCDPLPRTKLLSPIIFHEGRFVQRPTPIVALLSFLWLPIGIILSILRVYLNIPLPEKIAWYNYKLLGIKVIVKGTPPPAPRKGQKGVLFVCNHRTILDPVVTAVALGRKISCVTYSISKFSEIISPIKAVALSREREKDAANIRKLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFYGTTVRGHKVLDPYFVFMNPVPTYEITFLNQLPKELTVSGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYAMLAGTDGRVPSKKEKA*