AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1151960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1151960 MtrunA17_Chr7g0241831 98.193 498 9 0 1 498 1 498 0.0 1005
Msa1151960 MtrunA17_Chr4g0005991 84.444 495 75 2 3 496 1 494 0.0 841
Msa1151960 MtrunA17_Chr8g0348781 63.211 492 176 4 7 493 8 499 0.0 652
Msa1151960 MtrunA17_Chr1g0170421 55.984 493 211 3 11 498 42 533 0.0 566
Msa1151960 MtrunA17_Chr5g0435581 51.899 474 219 3 24 491 2 472 5.27e-164 473
Msa1151960 MtrunA17_Chr5g0443341 50.313 479 223 7 19 491 60 529 6.73e-156 454
Msa1151960 MtrunA17_Chr3g0096481 48.566 488 227 8 19 495 55 529 3.96e-153 447
Msa1151960 MtrunA17_Chr1g0194391 42.455 497 266 10 9 496 49 534 2.68e-123 371
Msa1151960 MtrunA17_Chr5g0425071 39.800 500 273 7 10 496 2 486 2.31e-117 354
Msa1151960 MtrunA17_Chr3g0096591 54.244 271 123 1 222 491 1 271 1.47e-101 305
Msa1151960 MtrunA17_Chr3g0096581 41.117 197 107 4 19 214 59 247 5.50e-41 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1151960 AT2G38110.1 77.778 495 106 2 7 498 8 501 0.0 787
Msa1151960 AT4G00400.1 62.041 490 180 4 7 493 8 494 0.0 611
Msa1151960 AT1G01610.1 61.711 491 181 5 7 493 8 495 0.0 608
Msa1151960 AT3G11430.1 51.660 482 212 4 22 491 9 481 9.58e-165 476
Msa1151960 AT5G06090.1 48.560 486 229 4 18 491 3 479 5.27e-152 443
Msa1151960 AT1G06520.1 46.247 493 240 10 18 491 98 584 1.82e-143 424
Msa1151960 AT1G02390.1 38.086 512 284 11 8 494 27 530 6.17e-106 326
Msa1151960 AT4G01950.1 37.721 509 288 12 2 491 19 517 1.39e-102 317
Msa1151960 AT4G01950.2 37.721 509 288 12 2 491 47 545 2.42e-102 317
Msa1151960 AT3G11325.1 38.043 460 187 10 34 491 6 369 2.69e-87 273
Msa1151960 AT3G11325.2 38.043 460 187 10 34 491 9 372 2.91e-87 273

Find 134 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAAAACACATTAAATT+TGG 0.180394 7_4:-36980271 None:intergenic
TCAGTCTAATTTGCCTGATT+TGG 0.196119 7_4:+36977056 Msa1151960:CDS
TGGAATGTGTTCAATTCTTT+TGG 0.207233 7_4:+36976847 Msa1151960:CDS
CCACTAACTGTAAGCTCTTT+AGG 0.240056 7_4:-36980049 None:intergenic
GCATAATACTTTCCATCTTA+AGG 0.256062 7_4:+36979495 Msa1151960:CDS
CCCAGTTGCCCTTCCCGATT+TGG 0.258883 7_4:-36976971 None:intergenic
GAAAGTGCCACTGCTTTAAT+TGG 0.262083 7_4:-36979752 None:intergenic
TGGTACAATTATAAACTATT+AGG 0.266176 7_4:+36979554 Msa1151960:CDS
TCCTCTGCAGGAAGGGTATA+TGG 0.267172 7_4:+36979343 Msa1151960:intron
AGTGGATCACATTTAATTCT+TGG 0.268820 7_4:-36979368 None:intergenic
GGATTCATGAACACAAAATA+AGG 0.281571 7_4:-36979989 None:intergenic
CAGTCTAATTTGCCTGATTT+GGG 0.282394 7_4:+36977057 Msa1151960:CDS
AGGAGCCTGGTGTTCTTGTT+GGG 0.300559 7_4:+36977001 Msa1151960:CDS
ACCAAATCGGGAAGGGCAAC+TGG 0.300938 7_4:+36976970 Msa1151960:CDS
GAATTGTTGTACTTTGAAAT+TGG 0.303441 7_4:-36976529 None:intergenic
CATAATACTTTCCATCTTAA+GGG 0.319065 7_4:+36979496 Msa1151960:CDS
TTGGGTGGTGATAAGGTGAT+TGG 0.321183 7_4:+36976931 Msa1151960:CDS
GGACTTAGAAGTTTAGTTCT+TGG 0.323980 7_4:-36979392 None:intergenic
GGAATCAAAGTTATTGTTAA+GGG 0.331113 7_4:+36979575 Msa1151960:CDS
TAGCCATAGGAATGATAATA+AGG 0.346790 7_4:-36979465 None:intergenic
TCCCTACAAGTTGTTCCTTC+CGG 0.348891 7_4:-36979842 None:intergenic
ATTCCCTTACTACATGCTTA+TGG 0.355427 7_4:+36976618 Msa1151960:CDS
CCTAAAGAGCTTACAGTTAG+TGG 0.359503 7_4:+36980049 Msa1151960:CDS
TATATTCAAAGGGTTCTTGC+TGG 0.360292 7_4:+36980100 Msa1151960:CDS
AGGAATCAAAGTTATTGTTA+AGG 0.363421 7_4:+36979574 Msa1151960:CDS
GATAAGTATGCCATGCTTGC+TGG 0.365490 7_4:+36980160 Msa1151960:CDS
GTGGTTACAGCAGTTGCATT+AGG 0.369985 7_4:+36979674 Msa1151960:CDS
CGATGGTTTCTGAGACAAAA+AGG 0.373974 7_4:-36976711 None:intergenic
ACGTCCTCAGCGTAGAATTT+CGG 0.374562 7_4:-36976811 None:intergenic
GTAAGAGGATGATTCCTCTT+AGG 0.380558 7_4:-36976660 None:intergenic
GCACCAAGAAAAGGTCAAAA+AGG 0.382407 7_4:+36979611 Msa1151960:CDS
ATTAACCGATAGGATTGTTC+CGG 0.386364 7_4:+36979901 Msa1151960:CDS
AAGGAGCCTGGTGTTCTTGT+TGG 0.388349 7_4:+36977000 Msa1151960:CDS
TGTGTAGTGAATGAGGTATT+TGG 0.392929 7_4:-36976444 None:intergenic
AAGGGCAACTGGGTTTGTTA+AGG 0.407100 7_4:+36976981 Msa1151960:CDS
TTGCCTTATTATCATTCCTA+TGG 0.412010 7_4:+36979462 Msa1151960:CDS
TAACTATATAGAATTCAAAA+AGG 0.412432 7_4:-36980248 None:intergenic
TCTTAGGAAACTACCGGCTT+CGG 0.414793 7_4:-36976644 None:intergenic
AAATGTGTTATGAGGAGAAA+AGG 0.414960 7_4:-36976412 None:intergenic
TGAAAGGGACGGAGAGTAAG+AGG 0.416211 7_4:-36976675 None:intergenic
AGGGTTCTTGCTGGAACACT+TGG 0.417445 7_4:+36980109 Msa1151960:CDS
ATAAATACTAACCTTGCAAA+TGG 0.421413 7_4:-36977115 None:intergenic
AATGATAATAAGGCAACAAT+AGG 0.421650 7_4:-36979455 None:intergenic
CCATTTGTTAAGAATTTGTT+GGG 0.428033 7_4:+36976913 Msa1151960:CDS
TGAACTTGAGGTGACCAAAT+CGG 0.429869 7_4:+36976957 Msa1151960:CDS
TTGTGATGATGCTCATGAAA+TGG 0.429921 7_4:+36980326 Msa1151960:three_prime_UTR
CTATCTCCCAGTCCCAAATC+AGG 0.435448 7_4:-36977069 None:intergenic
CCCAACAAATTCTTAACAAA+TGG 0.435553 7_4:-36976913 None:intergenic
AGAAGTTTAGTTCTTGGTAG+TGG 0.438170 7_4:-36979386 None:intergenic
GAACTTGAGGTGACCAAATC+GGG 0.438703 7_4:+36976958 Msa1151960:CDS
TAATTTGCCTGATTTGGGAC+TGG 0.444415 7_4:+36977062 Msa1151960:CDS
ACTGGGTTTGTTAAGGAGCC+TGG 0.448681 7_4:+36976988 Msa1151960:CDS
ATGAGGAGAAAAGGAGAAGG+AGG 0.450194 7_4:-36976403 None:intergenic
TGGGTGGTGATAAGGTGATT+GGG 0.450506 7_4:+36976932 Msa1151960:CDS
AATTTGCCTGATTTGGGACT+GGG 0.452524 7_4:+36977063 Msa1151960:CDS
ATGGAAAGTATTATGCCAAT+TGG 0.452627 7_4:-36979488 None:intergenic
GAATTTGTTGGGTGGTGATA+AGG 0.457362 7_4:+36976924 Msa1151960:CDS
TGTTTCGTGTTAATTGCAAC+CGG 0.459361 7_4:-36979920 None:intergenic
CAGTGGCACTTTCAAGAGAA+AGG 0.461557 7_4:+36979762 Msa1151960:CDS
GCGCTGAACCGTAGAAGAAA+TGG 0.471044 7_4:-36979866 None:intergenic
TTGAACACATTCCACGTCTC+AGG 0.473991 7_4:-36976838 None:intergenic
GTTTAGGTATACCCTTAAGA+TGG 0.476258 7_4:-36979507 None:intergenic
TCATTCCTATGGCTACCAAT+TGG 0.476350 7_4:+36979473 Msa1151960:CDS
ATGCTTATGGCTACCGAAGC+CGG 0.481581 7_4:+36976631 Msa1151960:CDS
GTCCGGAAGGAACAACTTGT+AGG 0.482795 7_4:+36979840 Msa1151960:CDS
GTAGGGAACCATTTCTTCTA+CGG 0.489695 7_4:+36979858 Msa1151960:CDS
CACGGCTAGTCCAAGGTTGA+TGG 0.489858 7_4:+36976885 Msa1151960:CDS
CTAAGTCAGATGCAACGGTT+TGG 0.489913 7_4:-36976567 None:intergenic
TTTCTGGTAAGGGAATGTTT+AGG 0.490656 7_4:-36979523 None:intergenic
ACTTTGAAATTGGTTTGAAA+TGG 0.491494 7_4:-36976519 None:intergenic
GTTGAATGAGGTTGAGAAGA+TGG 0.494156 7_4:-36976468 None:intergenic
ACCGTTGCATCTGACTTAGA+TGG 0.496852 7_4:+36976571 Msa1151960:CDS
TGAGGAGAAAAGGAGAAGGA+GGG 0.502630 7_4:-36976402 None:intergenic
AGTTGCAAATTATATTCAAA+GGG 0.504087 7_4:+36980090 Msa1151960:CDS
AAGTTGCAAATTATATTCAA+AGG 0.504845 7_4:+36980089 Msa1151960:CDS
GCCATTTGTTAAGAATTTGT+TGG 0.505952 7_4:+36976912 Msa1151960:CDS
GGAGCCTGGTGTTCTTGTTG+GGG 0.507561 7_4:+36977002 Msa1151960:CDS
AATGGCTCCACCATCAACCT+TGG 0.511121 7_4:-36976895 None:intergenic
ATAAGGAAATTACTTGAAGA+AGG 0.512819 7_4:+36979803 Msa1151960:CDS
TTGATCTTCATAACCTTCGC+AGG 0.513177 7_4:+36976745 Msa1151960:CDS
GAGGAGAAAAGGAGAAGGAG+GGG 0.513481 7_4:-36976401 None:intergenic
GATTCATGAACACAAAATAA+GGG 0.515157 7_4:-36979988 None:intergenic
CCTCCACCAGCACCAAGAAA+AGG 0.516206 7_4:+36979602 Msa1151960:CDS
ACGTTGTCACGGCTAGTCCA+AGG 0.524082 7_4:+36976878 Msa1151960:CDS
TGACTTTATGTCCATTTGCA+AGG 0.526303 7_4:+36977104 Msa1151960:CDS
GGTACGTGAAATATATGAAA+GGG 0.527101 7_4:-36976690 None:intergenic
TCCGGAAGGAACAACTTGTA+GGG 0.535613 7_4:+36979841 Msa1151960:CDS
ATGACGTGGAGATGGTTTCA+AGG 0.541289 7_4:+36976779 Msa1151960:CDS
AGTGGCACTTTCAAGAGAAA+GGG 0.541416 7_4:+36979763 Msa1151960:CDS
AAGAATGTGATCTCATAAGT+AGG 0.541733 7_4:-36980016 None:intergenic
TGGTAGAGTTCCATCTAAGA+AGG 0.544180 7_4:+36980189 Msa1151960:CDS
GTAGCCATAAGCATGTAGTA+AGG 0.544461 7_4:-36976622 None:intergenic
AGATGGGTGTGTAGTGAATG+AGG 0.544655 7_4:-36976451 None:intergenic
GATTCCTCTTAGGAAACTAC+CGG 0.549927 7_4:-36976650 None:intergenic
GAAGATCAATGACGTGGAGA+TGG 0.550046 7_4:+36976771 Msa1151960:CDS
AGGTGACCTAGTGATTTGTC+CGG 0.552254 7_4:+36979823 Msa1151960:CDS
GCCATGCTTGCTGGTACAGA+TGG 0.562456 7_4:+36980169 Msa1151960:CDS
AGGTACGTGAAATATATGAA+AGG 0.567264 7_4:-36976691 None:intergenic
AGCTCCCCAACAAGAACACC+AGG 0.567606 7_4:-36977006 None:intergenic
ACCATCTGTACCAGCAAGCA+TGG 0.568780 7_4:-36980170 None:intergenic
AATAAGGCAACAATAGGTGT+TGG 0.572028 7_4:-36979449 None:intergenic
GTGATCTCATAAGTAGGCAC+AGG 0.573493 7_4:-36980010 None:intergenic
GTTATGAGGAGAAAAGGAGA+AGG 0.577169 7_4:-36976406 None:intergenic
TTGAATGAGGTTGAGAAGAT+GGG 0.583371 7_4:-36976467 None:intergenic
GGTCCGCGGACACAAAGTAT+TGG 0.584467 7_4:+36979964 Msa1151960:CDS
TGGAAAGCGTTACGTTGTCA+CGG 0.586333 7_4:+36976867 Msa1151960:CDS
CCAAATCGGGAAGGGCAACT+GGG 0.587982 7_4:+36976971 Msa1151960:CDS
TGAGGTGACCAAATCGGGAA+GGG 0.590584 7_4:+36976963 Msa1151960:CDS
AGGACGTGCGTCCTGAGACG+TGG 0.599900 7_4:+36976827 Msa1151960:CDS
GGCTAGTCCAAGGTTGATGG+TGG 0.602655 7_4:+36976888 Msa1151960:CDS
GCCATCTAAGTCAGATGCAA+CGG 0.603277 7_4:-36976572 None:intergenic
GAAGCCGGTAGTTTCCTAAG+AGG 0.606044 7_4:+36976646 Msa1151960:CDS
TAGCCATAAGCATGTAGTAA+GGG 0.612096 7_4:-36976621 None:intergenic
TGCAACCGGAACAATCCTAT+CGG 0.612877 7_4:-36979906 None:intergenic
ATTGATCTTCAGACCTGCGA+AGG 0.614008 7_4:-36976758 None:intergenic
TTCCTTCCGGACAAATCACT+AGG 0.618250 7_4:-36979829 None:intergenic
AATTTCACCAATTAAAGCAG+TGG 0.621079 7_4:+36979745 Msa1151960:CDS
TTGAGGTGACCAAATCGGGA+AGG 0.622614 7_4:+36976962 Msa1151960:CDS
AGTGAATGAGGTATTTGGAA+TGG 0.622736 7_4:-36976439 None:intergenic
TTGAAGTAGAAAAGGGACAA+TGG 0.623971 7_4:+36980219 Msa1151960:exon
AATGCAACTGCTGTAACCAC+AGG 0.629755 7_4:-36979671 None:intergenic
TTGAGTGTACTAATTTAACA+AGG 0.633129 7_4:+36980134 Msa1151960:CDS
TTATGCCAATTGGTAGCCAT+AGG 0.634303 7_4:-36979478 None:intergenic
ATGGTTAGAAATGTGTTATG+AGG 0.641972 7_4:-36976420 None:intergenic
CGTGAAATATATGAAAGGGA+CGG 0.648172 7_4:-36976686 None:intergenic
AAAGAGCTTACAGTTAGTGG+AGG 0.649872 7_4:+36980052 Msa1151960:CDS
GGTCCAATACTTTGTGTCCG+CGG 0.653361 7_4:-36979967 None:intergenic
TTTGTTAAGAATTTGTTGGG+TGG 0.654024 7_4:+36976916 Msa1151960:CDS
CAGGATCTAAAATTGTGCGA+TGG 0.660031 7_4:-36979652 None:intergenic
CCATAAGAAAATGTTGAATG+AGG 0.660651 7_4:-36976480 None:intergenic
GACCTAGTGATTTGTCCGGA+AGG 0.669947 7_4:+36979827 Msa1151960:CDS
GGTGATTGGGACTGAACTTG+AGG 0.678672 7_4:+36976945 Msa1151960:CDS
AGGTCTGAAGATCAATGACG+TGG 0.721416 7_4:+36976765 Msa1151960:CDS
GTTGCCGAAATTCTACGCTG+AGG 0.727019 7_4:+36976807 Msa1151960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATATAATTTTAAATTT+TGG + chr7_4:36977544-36977563 Msa1151960:intron 0.0%
!! AAAATTATAAATTTAATTAA+GGG + chr7_4:36978847-36978866 Msa1151960:intron 0.0%
!! AGTTATATATGTATATATAA+GGG - chr7_4:36977468-36977487 None:intergenic 10.0%
!! TAGTTATATATGTATATATA+AGG - chr7_4:36977469-36977488 None:intergenic 10.0%
!! CTAAATTTAGAAATTAAATT+TGG - chr7_4:36978224-36978243 None:intergenic 10.0%
!!! CAAATTTAATTTCTAAATTT+AGG + chr7_4:36978222-36978241 Msa1151960:intron 10.0%
!! AATATATTTGAAGAAAAGTT+AGG - chr7_4:36977171-36977190 None:intergenic 15.0%
!! TTAATATATTTGTGTCTAAA+TGG - chr7_4:36977307-36977326 None:intergenic 15.0%
!! TATTAATTCCTTAATACTTT+AGG + chr7_4:36977579-36977598 Msa1151960:intron 15.0%
!!! TTCAACTTAATTTCTATTTT+CGG + chr7_4:36977780-36977799 Msa1151960:intron 15.0%
!! TCTAAATTTAAATTGATGTT+TGG + chr7_4:36977883-36977902 Msa1151960:intron 15.0%
!! AAAAAGAATAATACAATAGA+GGG - chr7_4:36978015-36978034 None:intergenic 15.0%
!! AAAAAAGAATAATACAATAG+AGG - chr7_4:36978016-36978035 None:intergenic 15.0%
!! TAAACAATTATCAAAATGAA+TGG + chr7_4:36978573-36978592 Msa1151960:intron 15.0%
!! AAAATTGTAAACATTAAGTT+GGG - chr7_4:36978636-36978655 None:intergenic 15.0%
!! TAAAATTGTAAACATTAAGT+TGG - chr7_4:36978637-36978656 None:intergenic 15.0%
!!! CATATGACTAATTTATTTTT+TGG + chr7_4:36978704-36978723 Msa1151960:intron 15.0%
!! TAACTATATAGAATTCAAAA+AGG - chr7_4:36980251-36980270 None:intergenic 15.0%
!! ATTTGAAAACACATTAAATT+TGG - chr7_4:36980274-36980293 None:intergenic 15.0%
!! ATCACAACAAATGAAATAAA+TGG + chr7_4:36977708-36977727 Msa1151960:intron 20.0%
!! TTAAGAAAAGTTACTAAGAT+AGG - chr7_4:36977834-36977853 None:intergenic 20.0%
!! AAAAGAATAATACAATAGAG+GGG - chr7_4:36978014-36978033 None:intergenic 20.0%
!!! ATAAATAAGAGTATAGAGTA+TGG - chr7_4:36978069-36978088 None:intergenic 20.0%
!!! ATACTCTATACTCTTATTTA+TGG + chr7_4:36978068-36978087 Msa1151960:intron 20.0%
!! CTTATAACTCACAATAATTA+GGG - chr7_4:36978190-36978209 None:intergenic 20.0%
!! ACTTATAACTCACAATAATT+AGG - chr7_4:36978191-36978210 None:intergenic 20.0%
!!! CAATTCATATGACTAATTTT+CGG + chr7_4:36978729-36978748 Msa1151960:intron 20.0%
!!! TTCAACTTTAGAAAATATGA+TGG - chr7_4:36978825-36978844 None:intergenic 20.0%
!!! AGGGTTACAATTTTTAATTA+TGG + chr7_4:36978866-36978885 Msa1151960:intron 20.0%
!!! AATTTGAGACTTTAATCTAA+AGG - chr7_4:36979038-36979057 None:intergenic 20.0%
!! TTAAAGTCTCAAATTTACAT+AGG + chr7_4:36979043-36979062 Msa1151960:intron 20.0%
!! AAATATTGTAGTTAATGACT+TGG - chr7_4:36979323-36979342 None:intergenic 20.0%
!! TGGTACAATTATAAACTATT+AGG + chr7_4:36979554-36979573 Msa1151960:CDS 20.0%
!! AAGTTGCAAATTATATTCAA+AGG + chr7_4:36980089-36980108 Msa1151960:CDS 20.0%
!! AGTTGCAAATTATATTCAAA+GGG + chr7_4:36980090-36980109 Msa1151960:CDS 20.0%
!!! ACTTTGAAATTGGTTTGAAA+TGG - chr7_4:36976522-36976541 None:intergenic 25.0%
!!! GAATTGTTGTACTTTGAAAT+TGG - chr7_4:36976532-36976551 None:intergenic 25.0%
!! TATGAAGATCAACATTTTGA+TGG - chr7_4:36976737-36976756 None:intergenic 25.0%
!! CCATTTGTTAAGAATTTGTT+GGG + chr7_4:36976913-36976932 Msa1151960:CDS 25.0%
! ATAAATACTAACCTTGCAAA+TGG - chr7_4:36977118-36977137 None:intergenic 25.0%
! GAAAAGTTAGGAACATATAT+AGG - chr7_4:36977159-36977178 None:intergenic 25.0%
!! TAATTTCTATTTTCGGAAGA+AGG + chr7_4:36977787-36977806 Msa1151960:intron 25.0%
! ATAGAAACAAAATATGGAAG+TGG - chr7_4:36977967-36977986 None:intergenic 25.0%
! GAGAGAATAGAAACAAAATA+TGG - chr7_4:36977973-36977992 None:intergenic 25.0%
!!! ATTTTGTTTCTATTCTCTCA+CGG + chr7_4:36977974-36977993 Msa1151960:intron 25.0%
!! TTGGATTTTATGTTCAAAGT+GGG - chr7_4:36978281-36978300 None:intergenic 25.0%
!! ATTGGATTTTATGTTCAAAG+TGG - chr7_4:36978282-36978301 None:intergenic 25.0%
!!! CATTGAGCTTTAAATTTGTA+CGG - chr7_4:36978535-36978554 None:intergenic 25.0%
!! TAATTGAGCTAGTTTCTAAT+TGG - chr7_4:36978801-36978820 None:intergenic 25.0%
!! AAGTCCAATAATTTTTCATG+AGG + chr7_4:36979409-36979428 Msa1151960:CDS 25.0%
!! AGTCCAATAATTTTTCATGA+GGG + chr7_4:36979410-36979429 Msa1151960:CDS 25.0%
! AATGATAATAAGGCAACAAT+AGG - chr7_4:36979458-36979477 None:intergenic 25.0%
! CATAATACTTTCCATCTTAA+GGG + chr7_4:36979496-36979515 Msa1151960:CDS 25.0%
! AGGAATCAAAGTTATTGTTA+AGG + chr7_4:36979574-36979593 Msa1151960:CDS 25.0%
! GGAATCAAAGTTATTGTTAA+GGG + chr7_4:36979575-36979594 Msa1151960:CDS 25.0%
! AAAAAGATGCAGCAAATATA+AGG + chr7_4:36979786-36979805 Msa1151960:CDS 25.0%
! ATAAGGAAATTACTTGAAGA+AGG + chr7_4:36979803-36979822 Msa1151960:CDS 25.0%
! GATTCATGAACACAAAATAA+GGG - chr7_4:36979991-36980010 None:intergenic 25.0%
! TTGAGTGTACTAATTTAACA+AGG + chr7_4:36980134-36980153 Msa1151960:CDS 25.0%
! AAAAAGCTTGAAGTAGAAAA+GGG + chr7_4:36980212-36980231 Msa1151960:exon 25.0%
AAATGTGTTATGAGGAGAAA+AGG - chr7_4:36976415-36976434 None:intergenic 30.0%
ATGGTTAGAAATGTGTTATG+AGG - chr7_4:36976423-36976442 None:intergenic 30.0%
CCATAAGAAAATGTTGAATG+AGG - chr7_4:36976483-36976502 None:intergenic 30.0%
! CCTCATTCAACATTTTCTTA+TGG + chr7_4:36976480-36976499 Msa1151960:exon 30.0%
! TCAACATTTTCTTATGGTCA+TGG + chr7_4:36976486-36976505 Msa1151960:exon 30.0%
! CAACATTTTCTTATGGTCAT+GGG + chr7_4:36976487-36976506 Msa1151960:exon 30.0%
GGTACGTGAAATATATGAAA+GGG - chr7_4:36976693-36976712 None:intergenic 30.0%
AGGTACGTGAAATATATGAA+AGG - chr7_4:36976694-36976713 None:intergenic 30.0%
! TGGAATGTGTTCAATTCTTT+TGG + chr7_4:36976847-36976866 Msa1151960:CDS 30.0%
! GCCATTTGTTAAGAATTTGT+TGG + chr7_4:36976912-36976931 Msa1151960:CDS 30.0%
CCCAACAAATTCTTAACAAA+TGG - chr7_4:36976916-36976935 None:intergenic 30.0%
!! TTTGTTAAGAATTTGTTGGG+TGG + chr7_4:36976916-36976935 Msa1151960:CDS 30.0%
! TTTGTCCAAGATTTTCTTTG+AGG + chr7_4:36977248-36977267 Msa1151960:intron 30.0%
! TTGTCCAAGATTTTCTTTGA+GGG + chr7_4:36977249-36977268 Msa1151960:intron 30.0%
! TGTGATGTCCTAAAGTATTA+AGG - chr7_4:36977590-36977609 None:intergenic 30.0%
TGTTGTGATCTTAAAAACCA+TGG - chr7_4:36977697-36977716 None:intergenic 30.0%
AGAAAAGTTACTAAGATAGG+TGG - chr7_4:36977831-36977850 None:intergenic 30.0%
! ATAAGAGTATAGAGTATGGA+TGG - chr7_4:36978065-36978084 None:intergenic 30.0%
AATACAGAGTGGCATATAAA+AGG - chr7_4:36978111-36978130 None:intergenic 30.0%
TAGGGTTTGAAAGTAGTTAA+GGG - chr7_4:36978172-36978191 None:intergenic 30.0%
TTAGGGTTTGAAAGTAGTTA+AGG - chr7_4:36978173-36978192 None:intergenic 30.0%
AACATGAGCAACAAAATACA+AGG - chr7_4:36978305-36978324 None:intergenic 30.0%
TTGCTCATGTTAAAGATACA+AGG + chr7_4:36978314-36978333 Msa1151960:intron 30.0%
TGCTCATGTTAAAGATACAA+GGG + chr7_4:36978315-36978334 Msa1151960:intron 30.0%
AGTTATACGATGATAAGCTA+TGG - chr7_4:36978486-36978505 None:intergenic 30.0%
! TTTTATATAGTTGTGCATGC+TGG + chr7_4:36978652-36978671 Msa1151960:intron 30.0%
AATTATTATCGTTGTCTACG+CGG - chr7_4:36978939-36978958 None:intergenic 30.0%
ATTTACATAGGTGAGAATAG+AGG + chr7_4:36979055-36979074 Msa1151960:intron 30.0%
TTTACATAGGTGAGAATAGA+GGG + chr7_4:36979056-36979075 Msa1151960:intron 30.0%
TGTGACCAAACAAAAATTCT+TGG + chr7_4:36979197-36979216 Msa1151960:intron 30.0%
! CAAGACCAAGAATTTTTGTT+TGG - chr7_4:36979205-36979224 None:intergenic 30.0%
CAAACAAAAATTCTTGGTCT+TGG + chr7_4:36979203-36979222 Msa1151960:intron 30.0%
AGTGGATCACATTTAATTCT+TGG - chr7_4:36979371-36979390 None:intergenic 30.0%
CTACCCTCATGAAAAATTAT+TGG - chr7_4:36979416-36979435 None:intergenic 30.0%
! TTGCCTTATTATCATTCCTA+TGG + chr7_4:36979462-36979481 Msa1151960:CDS 30.0%
TAGCCATAGGAATGATAATA+AGG - chr7_4:36979468-36979487 None:intergenic 30.0%
!! ATGGAAAGTATTATGCCAAT+TGG - chr7_4:36979491-36979510 None:intergenic 30.0%
GCATAATACTTTCCATCTTA+AGG + chr7_4:36979495-36979514 Msa1151960:CDS 30.0%
!!! CAAGCAATTTTTTCTGGTAA+GGG - chr7_4:36979536-36979555 None:intergenic 30.0%
!!! TTGTACCAAGCAATTTTTTC+TGG - chr7_4:36979542-36979561 None:intergenic 30.0%
AATTTCACCAATTAAAGCAG+TGG + chr7_4:36979745-36979764 Msa1151960:CDS 30.0%
! ACGAAACAAAGTGTGTTTTA+TGG + chr7_4:36979935-36979954 Msa1151960:CDS 30.0%
! AAGTGTGTTTTATGGTACAA+CGG + chr7_4:36979943-36979962 Msa1151960:CDS 30.0%
GGATTCATGAACACAAAATA+AGG - chr7_4:36979992-36980011 None:intergenic 30.0%
AAGAATGTGATCTCATAAGT+AGG - chr7_4:36980019-36980038 None:intergenic 30.0%
GAAAAAGCTTGAAGTAGAAA+AGG + chr7_4:36980211-36980230 Msa1151960:exon 30.0%
!! AGGGGTTTTTAAAAGGAGTT+GGG - chr7_4:36976386-36976405 None:intergenic 35.0%
! AGTGAATGAGGTATTTGGAA+TGG - chr7_4:36976442-36976461 None:intergenic 35.0%
! TGTGTAGTGAATGAGGTATT+TGG - chr7_4:36976447-36976466 None:intergenic 35.0%
TTGAATGAGGTTGAGAAGAT+GGG - chr7_4:36976470-36976489 None:intergenic 35.0%
ATTCCCTTACTACATGCTTA+TGG + chr7_4:36976618-36976637 Msa1151960:CDS 35.0%
TAGCCATAAGCATGTAGTAA+GGG - chr7_4:36976624-36976643 None:intergenic 35.0%
CGTGAAATATATGAAAGGGA+CGG - chr7_4:36976689-36976708 None:intergenic 35.0%
! TCAGTCTAATTTGCCTGATT+TGG + chr7_4:36977056-36977075 Msa1151960:CDS 35.0%
! CAGTCTAATTTGCCTGATTT+GGG + chr7_4:36977057-36977076 Msa1151960:CDS 35.0%
TGACTTTATGTCCATTTGCA+AGG + chr7_4:36977104-36977123 Msa1151960:CDS 35.0%
AACACCCTCAAAGAAAATCT+TGG - chr7_4:36977256-36977275 None:intergenic 35.0%
ATCTTAACGTTGTACAGTTG+TGG + chr7_4:36977670-36977689 Msa1151960:intron 35.0%
!! TAGGTGGATTGAGTCATAAT+TGG - chr7_4:36977815-36977834 None:intergenic 35.0%
TGACTATGACATGTTGCTAT+TGG + chr7_4:36977918-36977937 Msa1151960:intron 35.0%
AAAATATGGAAGTGGAAGAG+AGG - chr7_4:36977959-36977978 None:intergenic 35.0%
AATATTTACCACCATGCATG+TGG + chr7_4:36978038-36978057 Msa1151960:intron 35.0%
TACTCAACTGAAATACAGAG+TGG - chr7_4:36978122-36978141 None:intergenic 35.0%
GAGCAACAAAATACAAGGAT+TGG - chr7_4:36978300-36978319 None:intergenic 35.0%
TCACGTTGAATGAGATTTAG+TGG + chr7_4:36978373-36978392 Msa1151960:intron 35.0%
CACGTTGAATGAGATTTAGT+GGG + chr7_4:36978374-36978393 Msa1151960:intron 35.0%
ACGTTGAATGAGATTTAGTG+GGG + chr7_4:36978375-36978394 Msa1151960:intron 35.0%
ATACGATGATAAGCTATGGT+GGG - chr7_4:36978482-36978501 None:intergenic 35.0%
TATACGATGATAAGCTATGG+TGG - chr7_4:36978483-36978502 None:intergenic 35.0%
ATCTTCCTATACTCAACCAA+GGG + chr7_4:36978601-36978620 Msa1151960:intron 35.0%
!! GTAAACATTAAGTTGGGACA+TGG - chr7_4:36978630-36978649 None:intergenic 35.0%
CAAACCAAAATTCTTGGTCA+TGG - chr7_4:36979099-36979118 None:intergenic 35.0%
!!! CATGACCAAGAATTTTGGTT+TGG + chr7_4:36979097-36979116 Msa1151960:intron 35.0%
TGTGACCAAACCAAAATTCT+TGG - chr7_4:36979105-36979124 None:intergenic 35.0%
CTATTCGAGAAAATCTTGTG+TGG - chr7_4:36979230-36979249 None:intergenic 35.0%
! CACAAGATTTTCTCGAATAG+AGG + chr7_4:36979230-36979249 Msa1151960:intron 35.0%
! ACTACAATATTTTCCTCTGC+AGG + chr7_4:36979331-36979350 Msa1151960:intron 35.0%
! AATATTTTCCTCTGCAGGAA+GGG + chr7_4:36979336-36979355 Msa1151960:intron 35.0%
!! AGAAGTTTAGTTCTTGGTAG+TGG - chr7_4:36979389-36979408 None:intergenic 35.0%
!! GGACTTAGAAGTTTAGTTCT+TGG - chr7_4:36979395-36979414 None:intergenic 35.0%
AATAAGGCAACAATAGGTGT+TGG - chr7_4:36979452-36979471 None:intergenic 35.0%
GTTTAGGTATACCCTTAAGA+TGG - chr7_4:36979510-36979529 None:intergenic 35.0%
! TTTCTGGTAAGGGAATGTTT+AGG - chr7_4:36979526-36979545 None:intergenic 35.0%
!!! CCAAGCAATTTTTTCTGGTA+AGG - chr7_4:36979537-36979556 None:intergenic 35.0%
CCTTACCAGAAAAAATTGCT+TGG + chr7_4:36979534-36979553 Msa1151960:CDS 35.0%
! ACACCTTTTTGACCTTTTCT+TGG - chr7_4:36979617-36979636 None:intergenic 35.0%
! TTTTCGCTGAATTAACCGAT+AGG + chr7_4:36979891-36979910 Msa1151960:CDS 35.0%
ATTAACCGATAGGATTGTTC+CGG + chr7_4:36979901-36979920 Msa1151960:CDS 35.0%
TGTTTCGTGTTAATTGCAAC+CGG - chr7_4:36979923-36979942 None:intergenic 35.0%
TATATTCAAAGGGTTCTTGC+TGG + chr7_4:36980100-36980119 Msa1151960:CDS 35.0%
!! CAAGCTTTTTCCTTCTTAGA+TGG - chr7_4:36980202-36980221 None:intergenic 35.0%
TTGAAGTAGAAAAGGGACAA+TGG + chr7_4:36980219-36980238 Msa1151960:exon 35.0%
! TTGTGATGATGCTCATGAAA+TGG + chr7_4:36980326-36980345 Msa1151960:three_prime_UTR 35.0%
!! GGTTTTTAAAAGGAGTTGGG+GGG - chr7_4:36976383-36976402 None:intergenic 40.0%
!! GGGTTTTTAAAAGGAGTTGG+GGG - chr7_4:36976384-36976403 None:intergenic 40.0%
!! GGGGTTTTTAAAAGGAGTTG+GGG - chr7_4:36976385-36976404 None:intergenic 40.0%
!! GAGGGGTTTTTAAAAGGAGT+TGG - chr7_4:36976387-36976406 None:intergenic 40.0%
! GAGAAGGAGGGGTTTTTAAA+AGG - chr7_4:36976393-36976412 None:intergenic 40.0%
GTTATGAGGAGAAAAGGAGA+AGG - chr7_4:36976409-36976428 None:intergenic 40.0%
GTTGAATGAGGTTGAGAAGA+TGG - chr7_4:36976471-36976490 None:intergenic 40.0%
GTAGCCATAAGCATGTAGTA+AGG - chr7_4:36976625-36976644 None:intergenic 40.0%
GATTCCTCTTAGGAAACTAC+CGG - chr7_4:36976653-36976672 None:intergenic 40.0%
GTAAGAGGATGATTCCTCTT+AGG - chr7_4:36976663-36976682 None:intergenic 40.0%
!! CGATGGTTTCTGAGACAAAA+AGG - chr7_4:36976714-36976733 None:intergenic 40.0%
!!! GATCAACATTTTGATGGCGA+TGG - chr7_4:36976731-36976750 None:intergenic 40.0%
TTGATCTTCATAACCTTCGC+AGG + chr7_4:36976745-36976764 Msa1151960:CDS 40.0%
!! GAATTTGTTGGGTGGTGATA+AGG + chr7_4:36976924-36976943 Msa1151960:CDS 40.0%
TGAACTTGAGGTGACCAAAT+CGG + chr7_4:36976957-36976976 Msa1151960:CDS 40.0%
!! TAATTTGCCTGATTTGGGAC+TGG + chr7_4:36977062-36977081 Msa1151960:CDS 40.0%
!! AATTTGCCTGATTTGGGACT+GGG + chr7_4:36977063-36977082 Msa1151960:CDS 40.0%
GATCTTCCTATACTCAACCA+AGG + chr7_4:36978600-36978619 Msa1151960:intron 40.0%
! TGGACCATGACCAAGAATTT+TGG + chr7_4:36979092-36979111 Msa1151960:intron 40.0%
! CAATATTTTCCTCTGCAGGA+AGG + chr7_4:36979335-36979354 Msa1151960:intron 40.0%
TCATTCCTATGGCTACCAAT+TGG + chr7_4:36979473-36979492 Msa1151960:CDS 40.0%
! TTATGCCAATTGGTAGCCAT+AGG - chr7_4:36979481-36979500 None:intergenic 40.0%
!! TTTTGACCTTTTCTTGGTGC+TGG - chr7_4:36979611-36979630 None:intergenic 40.0%
GCACCAAGAAAAGGTCAAAA+AGG + chr7_4:36979611-36979630 Msa1151960:CDS 40.0%
! CAGGATCTAAAATTGTGCGA+TGG - chr7_4:36979655-36979674 None:intergenic 40.0%
! TCGCACAATTTTAGATCCTG+TGG + chr7_4:36979655-36979674 Msa1151960:CDS 40.0%
!! GAAAGTGCCACTGCTTTAAT+TGG - chr7_4:36979755-36979774 None:intergenic 40.0%
AGTGGCACTTTCAAGAGAAA+GGG + chr7_4:36979763-36979782 Msa1151960:CDS 40.0%
GTAGGGAACCATTTCTTCTA+CGG + chr7_4:36979858-36979877 Msa1151960:CDS 40.0%
CCACTAACTGTAAGCTCTTT+AGG - chr7_4:36980052-36980071 None:intergenic 40.0%
CCTAAAGAGCTTACAGTTAG+TGG + chr7_4:36980049-36980068 Msa1151960:CDS 40.0%
AAAGAGCTTACAGTTAGTGG+AGG + chr7_4:36980052-36980071 Msa1151960:CDS 40.0%
TGGTAGAGTTCCATCTAAGA+AGG + chr7_4:36980189-36980208 Msa1151960:CDS 40.0%
TGAGGAGAAAAGGAGAAGGA+GGG - chr7_4:36976405-36976424 None:intergenic 45.0%
ATGAGGAGAAAAGGAGAAGG+AGG - chr7_4:36976406-36976425 None:intergenic 45.0%
AGATGGGTGTGTAGTGAATG+AGG - chr7_4:36976454-36976473 None:intergenic 45.0%
CTAAGTCAGATGCAACGGTT+TGG - chr7_4:36976570-36976589 None:intergenic 45.0%
ACCGTTGCATCTGACTTAGA+TGG + chr7_4:36976571-36976590 Msa1151960:CDS 45.0%
GCCATCTAAGTCAGATGCAA+CGG - chr7_4:36976575-36976594 None:intergenic 45.0%
!! TCTTAGGAAACTACCGGCTT+CGG - chr7_4:36976647-36976666 None:intergenic 45.0%
ATTGATCTTCAGACCTGCGA+AGG - chr7_4:36976761-36976780 None:intergenic 45.0%
AGGTCTGAAGATCAATGACG+TGG + chr7_4:36976765-36976784 Msa1151960:CDS 45.0%
GAAGATCAATGACGTGGAGA+TGG + chr7_4:36976771-36976790 Msa1151960:CDS 45.0%
ATGACGTGGAGATGGTTTCA+AGG + chr7_4:36976779-36976798 Msa1151960:CDS 45.0%
ACGTCCTCAGCGTAGAATTT+CGG - chr7_4:36976814-36976833 None:intergenic 45.0%
TTGAACACATTCCACGTCTC+AGG - chr7_4:36976841-36976860 None:intergenic 45.0%
!! TGGAAAGCGTTACGTTGTCA+CGG + chr7_4:36976867-36976886 Msa1151960:CDS 45.0%
TTGGGTGGTGATAAGGTGAT+TGG + chr7_4:36976931-36976950 Msa1151960:CDS 45.0%
TGGGTGGTGATAAGGTGATT+GGG + chr7_4:36976932-36976951 Msa1151960:CDS 45.0%
GAACTTGAGGTGACCAAATC+GGG + chr7_4:36976958-36976977 Msa1151960:CDS 45.0%
!! AAGGGCAACTGGGTTTGTTA+AGG + chr7_4:36976981-36977000 Msa1151960:CDS 45.0%
! ATGACATGTTGCTATTGGCC+TGG + chr7_4:36977923-36977942 Msa1151960:intron 45.0%
AGTGGAAGAGAGGCTCATTA+TGG - chr7_4:36977949-36977968 None:intergenic 45.0%
GGATTCCCTTGGTTGAGTAT+AGG - chr7_4:36978609-36978628 None:intergenic 45.0%
TAGAGGGAGAAACACTTGTG+TGG + chr7_4:36979072-36979091 Msa1151960:intron 45.0%
GAGAGAAGAGAAGAGAGAGA+AGG - chr7_4:36979139-36979158 None:intergenic 45.0%
AATGCAACTGCTGTAACCAC+AGG - chr7_4:36979674-36979693 None:intergenic 45.0%
GTGGTTACAGCAGTTGCATT+AGG + chr7_4:36979674-36979693 Msa1151960:CDS 45.0%
CAGTGGCACTTTCAAGAGAA+AGG + chr7_4:36979762-36979781 Msa1151960:CDS 45.0%
! AGGTGACCTAGTGATTTGTC+CGG + chr7_4:36979823-36979842 Msa1151960:CDS 45.0%
TTCCTTCCGGACAAATCACT+AGG - chr7_4:36979832-36979851 None:intergenic 45.0%
TCCGGAAGGAACAACTTGTA+GGG + chr7_4:36979841-36979860 Msa1151960:CDS 45.0%
TCCCTACAAGTTGTTCCTTC+CGG - chr7_4:36979845-36979864 None:intergenic 45.0%
TGCAACCGGAACAATCCTAT+CGG - chr7_4:36979909-36979928 None:intergenic 45.0%
! TTTTATGGTACAACGGTCCG+CGG + chr7_4:36979950-36979969 Msa1151960:CDS 45.0%
GTGATCTCATAAGTAGGCAC+AGG - chr7_4:36980013-36980032 None:intergenic 45.0%
GATAAGTATGCCATGCTTGC+TGG + chr7_4:36980160-36980179 Msa1151960:CDS 45.0%
!!! AAATTTAATTTCTAAATTTA+GGG + chr7_4:36978223-36978242 Msa1151960:intron 5.0%
!! GAAAATTATAAATTTAATTA+AGG + chr7_4:36978846-36978865 Msa1151960:intron 5.0%
GAGGAGAAAAGGAGAAGGAG+GGG - chr7_4:36976404-36976423 None:intergenic 50.0%
ATGCTTATGGCTACCGAAGC+CGG + chr7_4:36976631-36976650 Msa1151960:CDS 50.0%
GAAGCCGGTAGTTTCCTAAG+AGG + chr7_4:36976646-36976665 Msa1151960:CDS 50.0%
TGAAAGGGACGGAGAGTAAG+AGG - chr7_4:36976678-36976697 None:intergenic 50.0%
GTTGCCGAAATTCTACGCTG+AGG + chr7_4:36976807-36976826 Msa1151960:CDS 50.0%
AATGGCTCCACCATCAACCT+TGG - chr7_4:36976898-36976917 None:intergenic 50.0%
GGTGATTGGGACTGAACTTG+AGG + chr7_4:36976945-36976964 Msa1151960:CDS 50.0%
TTGAGGTGACCAAATCGGGA+AGG + chr7_4:36976962-36976981 Msa1151960:CDS 50.0%
TGAGGTGACCAAATCGGGAA+GGG + chr7_4:36976963-36976982 Msa1151960:CDS 50.0%
!! ACTGGGTTTGTTAAGGAGCC+TGG + chr7_4:36976988-36977007 Msa1151960:CDS 50.0%
AAGGAGCCTGGTGTTCTTGT+TGG + chr7_4:36977000-36977019 Msa1151960:CDS 50.0%
AGGAGCCTGGTGTTCTTGTT+GGG + chr7_4:36977001-36977020 Msa1151960:CDS 50.0%
CTATCTCCCAGTCCCAAATC+AGG - chr7_4:36977072-36977091 None:intergenic 50.0%
CGTTGTACAGTTGTGGACCA+TGG + chr7_4:36977677-36977696 Msa1151960:intron 50.0%
AAGAGAGGCTCATTATGGCC+AGG - chr7_4:36977944-36977963 None:intergenic 50.0%
GTATGGATGGACCACATGCA+TGG - chr7_4:36978052-36978071 None:intergenic 50.0%
AGTTGGGACATGGATTCCCT+TGG - chr7_4:36978620-36978639 None:intergenic 50.0%
TATCGTTGTCTACGCGGTGT+CGG - chr7_4:36978933-36978952 None:intergenic 50.0%
! TCCTCTGCAGGAAGGGTATA+TGG + chr7_4:36979343-36979362 Msa1151960:intron 50.0%
ACCATATACCCTTCCTGCAG+AGG - chr7_4:36979347-36979366 None:intergenic 50.0%
!!! TTTTCTTGGTGCTGGTGGAG+GGG - chr7_4:36979603-36979622 None:intergenic 50.0%
!!! CTTTTCTTGGTGCTGGTGGA+GGG - chr7_4:36979604-36979623 None:intergenic 50.0%
!!! TGACCTTTTCTTGGTGCTGG+TGG - chr7_4:36979608-36979627 None:intergenic 50.0%
! GACCTAGTGATTTGTCCGGA+AGG + chr7_4:36979827-36979846 Msa1151960:CDS 50.0%
GTCCGGAAGGAACAACTTGT+AGG + chr7_4:36979840-36979859 Msa1151960:CDS 50.0%
GCGCTGAACCGTAGAAGAAA+TGG - chr7_4:36979869-36979888 None:intergenic 50.0%
GGTCCAATACTTTGTGTCCG+CGG - chr7_4:36979970-36979989 None:intergenic 50.0%
AGGGTTCTTGCTGGAACACT+TGG + chr7_4:36980109-36980128 Msa1151960:CDS 50.0%
ACCATCTGTACCAGCAAGCA+TGG - chr7_4:36980173-36980192 None:intergenic 50.0%
! ACGTTGTCACGGCTAGTCCA+AGG + chr7_4:36976878-36976897 Msa1151960:CDS 55.0%
! CACGGCTAGTCCAAGGTTGA+TGG + chr7_4:36976885-36976904 Msa1151960:CDS 55.0%
!! GGCTAGTCCAAGGTTGATGG+TGG + chr7_4:36976888-36976907 Msa1151960:CDS 55.0%
ACCAAATCGGGAAGGGCAAC+TGG + chr7_4:36976970-36976989 Msa1151960:CDS 55.0%
CCAAATCGGGAAGGGCAACT+GGG + chr7_4:36976971-36976990 Msa1151960:CDS 55.0%
GGAGCCTGGTGTTCTTGTTG+GGG + chr7_4:36977002-36977021 Msa1151960:CDS 55.0%
AGCTCCCCAACAAGAACACC+AGG - chr7_4:36977009-36977028 None:intergenic 55.0%
TGGATGGACCACATGCATGG+TGG - chr7_4:36978049-36978068 None:intergenic 55.0%
!!! CCTTTTCTTGGTGCTGGTGG+AGG - chr7_4:36979605-36979624 None:intergenic 55.0%
CCTCCACCAGCACCAAGAAA+AGG + chr7_4:36979602-36979621 Msa1151960:CDS 55.0%
GGTCCGCGGACACAAAGTAT+TGG + chr7_4:36979964-36979983 Msa1151960:CDS 55.0%
! GCCATGCTTGCTGGTACAGA+TGG + chr7_4:36980169-36980188 Msa1151960:CDS 55.0%
CCCAGTTGCCCTTCCCGATT+TGG - chr7_4:36976974-36976993 None:intergenic 60.0%
AGGACGTGCGTCCTGAGACG+TGG + chr7_4:36976827-36976846 Msa1151960:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 36976371 36980410 36976371 ID=Msa1151960;Name=Msa1151960
chr7_4 mRNA 36976371 36980410 36976371 ID=Msa1151960-mRNA-1;Parent=Msa1151960;Name=Msa1151960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=128|1|1|1|1|1|2|188|498
chr7_4 exon 36976371 36977125 36976371 ID=Msa1151960-mRNA-1:exon:8694;Parent=Msa1151960-mRNA-1
chr7_4 exon 36979353 36980410 36979353 ID=Msa1151960-mRNA-1:exon:8695;Parent=Msa1151960-mRNA-1
chr7_4 five_prime_UTR 36976371 36976498 36976371 ID=Msa1151960-mRNA-1:five_prime_utr;Parent=Msa1151960-mRNA-1
chr7_4 CDS 36976499 36977125 36976499 ID=Msa1151960-mRNA-1:cds;Parent=Msa1151960-mRNA-1
chr7_4 CDS 36979353 36980222 36979353 ID=Msa1151960-mRNA-1:cds;Parent=Msa1151960-mRNA-1
chr7_4 three_prime_UTR 36980223 36980410 36980223 ID=Msa1151960-mRNA-1:three_prime_utr;Parent=Msa1151960-mRNA-1
Gene Sequence

>Msa1151960

ATGGTCATGGGAGCATTTCACCATTTCAAACCAATTTCAAAGTACAACAATTCACAAGATAAATCAAACCAAACCGTTGCATCTGACTTAGATGGCACACTTCTTGTATCTAGAGATGCATTCCCTTACTACATGCTTATGGCTACCGAAGCCGGTAGTTTCCTAAGAGGAATCATCCTCTTACTCTCCGTCCCTTTCATATATTTCACGTACCTTTTTGTCTCAGAAACCATCGCCATCAAAATGTTGATCTTCATAACCTTCGCAGGTCTGAAGATCAATGACGTGGAGATGGTTTCAAGGTCAGTGTTGCCGAAATTCTACGCTGAGGACGTGCGTCCTGAGACGTGGAATGTGTTCAATTCTTTTGGAAAGCGTTACGTTGTCACGGCTAGTCCAAGGTTGATGGTGGAGCCATTTGTTAAGAATTTGTTGGGTGGTGATAAGGTGATTGGGACTGAACTTGAGGTGACCAAATCGGGAAGGGCAACTGGGTTTGTTAAGGAGCCTGGTGTTCTTGTTGGGGAGCTCAAGAAAGATGCTGTTGTCAAAGAGTTTCAGTCTAATTTGCCTGATTTGGGACTGGGAGATAGTGAAAGTGATCATGACTTTATGTCCATTTGCAAGGAAGGGTATATGGTTCCAAGAATTAAATGTGATCCACTACCAAGAACTAAACTTCTAAGTCCAATAATTTTTCATGAGGGTAGATTTGTTCAACGACCAACACCTATTGTTGCCTTATTATCATTCCTATGGCTACCAATTGGCATAATACTTTCCATCTTAAGGGTATACCTAAACATTCCCTTACCAGAAAAAATTGCTTGGTACAATTATAAACTATTAGGAATCAAAGTTATTGTTAAGGGCACCCCTCCACCAGCACCAAGAAAAGGTCAAAAAGGTGTACTATTTGTGTGTAACCATCGCACAATTTTAGATCCTGTGGTTACAGCAGTTGCATTAGGAAGAAAAATTAGTTGTGTCACATATAGTATTAGTAAATTTAGTGAAATAATTTCACCAATTAAAGCAGTGGCACTTTCAAGAGAAAGGGAAAAAGATGCAGCAAATATAAGGAAATTACTTGAAGAAGGTGACCTAGTGATTTGTCCGGAAGGAACAACTTGTAGGGAACCATTTCTTCTACGGTTCAGCGCGCTTTTCGCTGAATTAACCGATAGGATTGTTCCGGTTGCAATTAACACGAAACAAAGTGTGTTTTATGGTACAACGGTCCGCGGACACAAAGTATTGGACCCTTATTTTGTGTTCATGAATCCTGTGCCTACTTATGAGATCACATTCTTGAATCAACTTCCTAAAGAGCTTACAGTTAGTGGAGGAAAATCTGCTATTGAAGTTGCAAATTATATTCAAAGGGTTCTTGCTGGAACACTTGGATTTGAGTGTACTAATTTAACAAGGAAAGATAAGTATGCCATGCTTGCTGGTACAGATGGTAGAGTTCCATCTAAGAAGGAAAAAGCTTGA

Protein sequence

>Msa1151960

MVMGAFHHFKPISKYNNSQDKSNQTVASDLDGTLLVSRDAFPYYMLMATEAGSFLRGIILLLSVPFIYFTYLFVSETIAIKMLIFITFAGLKINDVEMVSRSVLPKFYAEDVRPETWNVFNSFGKRYVVTASPRLMVEPFVKNLLGGDKVIGTELEVTKSGRATGFVKEPGVLVGELKKDAVVKEFQSNLPDLGLGDSESDHDFMSICKEGYMVPRIKCDPLPRTKLLSPIIFHEGRFVQRPTPIVALLSFLWLPIGIILSILRVYLNIPLPEKIAWYNYKLLGIKVIVKGTPPPAPRKGQKGVLFVCNHRTILDPVVTAVALGRKISCVTYSISKFSEIISPIKAVALSREREKDAANIRKLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFYGTTVRGHKVLDPYFVFMNPVPTYEITFLNQLPKELTVSGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYAMLAGTDGRVPSKKEKA*