Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062220 | XP_039690021.1 | 87.330 | 663 | 18 | 3 | 1 | 599 | 1 | 661 | 0.0 | 1166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062220 | sp|M4ISH1|CCL6_HUMLU | 66.718 | 655 | 151 | 4 | 5 | 595 | 3 | 654 | 0.0 | 901 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062220 | A0A072VRL7 | 87.330 | 663 | 18 | 3 | 1 | 599 | 1 | 661 | 0.0 | 1166 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013310 | Msa0062220 | 0.960142 | 3.178056e-118 | -8.615850e-47 |
| Msa0024680 | Msa0062220 | 0.838425 | 2.897428e-57 | -8.615850e-47 |
| Msa0027540 | Msa0062220 | 0.827165 | 1.819033e-54 | -8.615850e-47 |
| Msa0028060 | Msa0062220 | 0.820061 | 8.366961e-53 | -8.615850e-47 |
| Msa0029540 | Msa0062220 | -0.818579 | 1.821043e-52 | -8.615850e-47 |
| Msa0032120 | Msa0062220 | 0.824876 | 6.363519e-54 | -8.615850e-47 |
| Msa0032400 | Msa0062220 | 0.831016 | 2.119420e-55 | -8.615850e-47 |
| Msa0038350 | Msa0062220 | -0.825857 | 3.728244e-54 | -8.615850e-47 |
| Msa0048020 | Msa0062220 | 0.823329 | 1.468529e-53 | -8.615850e-47 |
| Msa0050430 | Msa0062220 | 0.824012 | 1.016381e-53 | -8.615850e-47 |
| Msa0052460 | Msa0062220 | 0.808767 | 2.633933e-50 | -8.615850e-47 |
| Msa0062220 | Msa0067360 | 0.802388 | 5.745855e-49 | -8.615850e-47 |
| Msa0062220 | Msa0075310 | 0.823108 | 1.654039e-53 | -8.615850e-47 |
| Msa0062220 | Msa0089200 | 0.804820 | 1.797928e-49 | -8.615850e-47 |
| Msa0062220 | Msa0091770 | 0.811680 | 6.202870e-51 | -8.615850e-47 |
| Msa0062220 | Msa0094100 | 0.815700 | 8.081938e-52 | -8.615850e-47 |
| Msa0062220 | Msa0094420 | 0.808478 | 3.036755e-50 | -8.615850e-47 |
| Msa0062220 | Msa0105420 | 0.824934 | 6.165801e-54 | -8.615850e-47 |
| Msa0062220 | Msa0106580 | 0.883455 | 4.423116e-71 | -8.615850e-47 |
| Msa0062220 | Msa0120330 | 0.851593 | 8.022508e-61 | -8.615850e-47 |
| Msa0062220 | Msa0128370 | 0.806844 | 6.752312e-50 | -8.615850e-47 |
| Msa0062220 | Msa0141430 | 0.824903 | 6.272735e-54 | -8.615850e-47 |
| Msa0062220 | Msa0162030 | 0.828946 | 6.775404e-55 | -8.615850e-47 |
| Msa0062220 | Msa0162050 | 0.815656 | 8.266986e-52 | -8.615850e-47 |
| Msa0062220 | Msa0162070 | 0.808884 | 2.486424e-50 | -8.615850e-47 |
| Msa0062220 | Msa0163550 | 0.821355 | 4.219388e-53 | -8.615850e-47 |
| Msa0062220 | Msa0168100 | 0.834391 | 3.078903e-56 | -8.615850e-47 |
| Msa0062220 | Msa0171780 | 0.804523 | 2.073326e-49 | -8.615850e-47 |
| Msa0062220 | Msa0172350 | 0.828282 | 9.804639e-55 | -8.615850e-47 |
| Msa0062220 | Msa0174560 | 0.805763 | 1.140645e-49 | -8.615850e-47 |
| Msa0062220 | Msa0185700 | 0.823369 | 1.437717e-53 | -8.615850e-47 |
| Msa0062220 | Msa0193650 | 0.818667 | 1.739432e-52 | -8.615850e-47 |
| Msa0062220 | Msa0200950 | -0.841536 | 4.476470e-58 | -8.615850e-47 |
| Msa0062220 | Msa0200970 | 0.813915 | 2.010313e-51 | -8.615850e-47 |
| Msa0062220 | Msa0207000 | 0.833865 | 4.171654e-56 | -8.615850e-47 |
| Msa0062220 | Msa0208630 | 0.802143 | 6.451401e-49 | -8.615850e-47 |
| Msa0062220 | Msa0222920 | 0.826160 | 3.159913e-54 | -8.615850e-47 |
| Msa0062220 | Msa0227500 | 0.828004 | 1.143987e-54 | -8.615850e-47 |
| Msa0062220 | Msa0239660 | 0.828863 | 7.094944e-55 | -8.615850e-47 |
| Msa0062220 | Msa0258670 | -0.833570 | 4.942564e-56 | -8.615850e-47 |
| Msa0062220 | Msa0260820 | -0.824279 | 8.795748e-54 | -8.615850e-47 |
| Msa0062220 | Msa0264350 | 0.842254 | 2.892594e-58 | -8.615850e-47 |
| Msa0062220 | Msa0265820 | 0.817349 | 3.453089e-52 | -8.615850e-47 |
| Msa0062220 | Msa0266000 | -0.804651 | 1.950429e-49 | -8.615850e-47 |
| Msa0062220 | Msa0267760 | 0.837402 | 5.310697e-57 | -8.615850e-47 |
| Msa0062220 | Msa0269360 | 0.802450 | 5.578180e-49 | -8.615850e-47 |
| Msa0062220 | Msa0277640 | 0.817894 | 2.602466e-52 | -8.615850e-47 |
| Msa0062220 | Msa0278620 | 0.800930 | 1.143774e-48 | -8.615850e-47 |
| Msa0062220 | Msa0281570 | 0.805130 | 1.548703e-49 | -8.615850e-47 |
| Msa0062220 | Msa0282850 | 0.816811 | 4.562898e-52 | -8.615850e-47 |
| Msa0062220 | Msa0297920 | 0.800224 | 1.593003e-48 | -8.615850e-47 |
| Msa0062220 | Msa0298940 | 0.804642 | 1.958471e-49 | -8.615850e-47 |
| Msa0062220 | Msa0298970 | 0.815507 | 8.922549e-52 | -8.615850e-47 |
| Msa0062220 | Msa0302450 | 0.828466 | 8.852495e-55 | -8.615850e-47 |
| Msa0062220 | Msa0304740 | 0.820769 | 5.756194e-53 | -8.615850e-47 |
| Msa0062220 | Msa0311580 | 0.804370 | 2.232013e-49 | -8.615850e-47 |
| Msa0062220 | Msa0313990 | 0.820651 | 6.129808e-53 | -8.615850e-47 |
| Msa0062220 | Msa0315480 | 0.803240 | 3.830724e-49 | -8.615850e-47 |
| Msa0062220 | Msa0320540 | 0.809581 | 1.763294e-50 | -8.615850e-47 |
| Msa0062220 | Msa0331590 | 0.811168 | 8.011454e-51 | -8.615850e-47 |
| Msa0062220 | Msa0334350 | 0.805708 | 1.171371e-49 | -8.615850e-47 |
| Msa0062220 | Msa0339860 | 0.802006 | 6.883952e-49 | -8.615850e-47 |
| Msa0062220 | Msa0342200 | 0.827448 | 1.555742e-54 | -8.615850e-47 |
| Msa0062220 | Msa0344070 | 0.802337 | 5.886193e-49 | -8.615850e-47 |
| Msa0062220 | Msa0350620 | 0.811560 | 6.585149e-51 | -8.615850e-47 |
| Msa0062220 | Msa0374070 | 0.807758 | 4.323150e-50 | -8.615850e-47 |
| Msa0062220 | Msa0376510 | 0.804512 | 2.084309e-49 | -8.615850e-47 |
| Msa0062220 | Msa0382560 | 0.842706 | 2.195202e-58 | -8.615850e-47 |
| Msa0062220 | Msa0423250 | 0.811570 | 6.553104e-51 | -8.615850e-47 |
| Msa0062220 | Msa0423360 | -0.840597 | 7.901676e-58 | -8.615850e-47 |
| Msa0062220 | Msa0437710 | 0.809069 | 2.270372e-50 | -8.615850e-47 |
| Msa0062220 | Msa0469390 | 0.802751 | 4.834294e-49 | -8.615850e-47 |
| Msa0062220 | Msa0490300 | 0.816212 | 6.212002e-52 | -8.615850e-47 |
| Msa0062220 | Msa0490350 | 0.807685 | 4.480332e-50 | -8.615850e-47 |
| Msa0062220 | Msa0508200 | 0.809778 | 1.599254e-50 | -8.615850e-47 |
| Msa0062220 | Msa0509970 | 0.813649 | 2.300659e-51 | -8.615850e-47 |
| Msa0062220 | Msa0525240 | 0.833305 | 5.755932e-56 | -8.615850e-47 |
| Msa0062220 | Msa0526640 | -0.818978 | 1.477945e-52 | -8.615850e-47 |
| Msa0062220 | Msa0526700 | 0.815240 | 1.022986e-51 | -8.615850e-47 |
| Msa0062220 | Msa0526710 | 0.834424 | 3.021173e-56 | -8.615850e-47 |
| Msa0062220 | Msa0527590 | 0.839210 | 1.815412e-57 | -8.615850e-47 |
| Msa0062220 | Msa0527600 | 0.823481 | 1.353430e-53 | -8.615850e-47 |
| Msa0062220 | Msa0532550 | 0.873407 | 1.506167e-67 | -8.615850e-47 |
| Msa0062220 | Msa0535030 | 0.812375 | 4.376890e-51 | -8.615850e-47 |
| Msa0062220 | Msa0535060 | 0.816349 | 5.788875e-52 | -8.615850e-47 |
| Msa0062220 | Msa0546380 | 0.826023 | 3.406313e-54 | -8.615850e-47 |
| Msa0062220 | Msa0574170 | 0.800303 | 1.535518e-48 | -8.615850e-47 |
| Msa0062220 | Msa0583930 | 0.839080 | 1.961803e-57 | -8.615850e-47 |
| Msa0062220 | Msa0583940 | 0.857764 | 1.306719e-62 | -8.615850e-47 |
| Msa0062220 | Msa0620810 | 0.814696 | 1.350911e-51 | -8.615850e-47 |
| Msa0062220 | Msa0621890 | 0.804712 | 1.893413e-49 | -8.615850e-47 |
| Msa0062220 | Msa0629290 | 0.801214 | 1.000864e-48 | -8.615850e-47 |
| Msa0062220 | Msa0638340 | 0.870097 | 1.887161e-66 | -8.615850e-47 |
| Msa0062220 | Msa0642650 | 0.808416 | 3.131173e-50 | -8.615850e-47 |
| Msa0062220 | Msa0670980 | 0.817841 | 2.675037e-52 | -8.615850e-47 |
| Msa0062220 | Msa0677400 | 0.810883 | 9.236180e-51 | -8.615850e-47 |
| Msa0062220 | Msa0681890 | 0.800641 | 1.310312e-48 | -8.615850e-47 |
| Msa0062220 | Msa0730180 | 0.817457 | 3.264491e-52 | -8.615850e-47 |
| Msa0062220 | Msa0740420 | 0.809492 | 1.842463e-50 | -8.615850e-47 |
| Msa0062220 | Msa0754720 | -0.824597 | 7.406326e-54 | -8.615850e-47 |
| Msa0062220 | Msa0756630 | -0.804743 | 1.866111e-49 | -8.615850e-47 |
| Msa0062220 | Msa0757950 | 0.804138 | 2.494752e-49 | -8.615850e-47 |
| Msa0062220 | Msa0770430 | 0.814831 | 1.260970e-51 | -8.615850e-47 |
| Msa0062220 | Msa0783510 | 0.846630 | 1.925556e-59 | -8.615850e-47 |
| Msa0062220 | Msa0808420 | 0.805347 | 1.395078e-49 | -8.615850e-47 |
| Msa0062220 | Msa0810480 | 0.804534 | 2.063319e-49 | -8.615850e-47 |
| Msa0062220 | Msa0820670 | 0.807426 | 5.083413e-50 | -8.615850e-47 |
| Msa0062220 | Msa0837990 | 0.852153 | 5.563408e-61 | -8.615850e-47 |
| Msa0062220 | Msa0843690 | 0.800880 | 1.171120e-48 | -8.615850e-47 |
| Msa0062220 | Msa0855020 | 0.817075 | 3.979337e-52 | -8.615850e-47 |
| Msa0062220 | Msa0859420 | 0.828456 | 8.899822e-55 | -8.615850e-47 |
| Msa0062220 | Msa0890250 | 0.838871 | 2.222699e-57 | -8.615850e-47 |
| Msa0062220 | Msa0901870 | 0.806379 | 8.464808e-50 | -8.615850e-47 |
| Msa0062220 | Msa0901880 | 0.814425 | 1.551165e-51 | -8.615850e-47 |
| Msa0062220 | Msa0907700 | 0.814136 | 1.796073e-51 | -8.615850e-47 |
| Msa0062220 | Msa0910400 | 0.823719 | 1.190348e-53 | -8.615850e-47 |
| Msa0062220 | Msa0925160 | 0.816975 | 4.191280e-52 | -8.615850e-47 |
| Msa0062220 | Msa0931610 | 0.810350 | 1.204111e-50 | -8.615850e-47 |
| Msa0062220 | Msa0946120 | 0.813380 | 2.636262e-51 | -8.615850e-47 |
| Msa0062220 | Msa0969570 | 0.819822 | 9.490746e-53 | -8.615850e-47 |
| Msa0062220 | Msa0969700 | 0.825021 | 5.881810e-54 | -8.615850e-47 |
| Msa0062220 | Msa0977320 | 0.804051 | 2.600985e-49 | -8.615850e-47 |
| Msa0062220 | Msa0980440 | 0.803172 | 3.956678e-49 | -8.615850e-47 |
| Msa0062220 | Msa0990520 | 0.810353 | 1.202136e-50 | -8.615850e-47 |
| Msa0062220 | Msa1000300 | 0.818222 | 2.193419e-52 | -8.615850e-47 |
| Msa0062220 | Msa1008490 | 0.826867 | 2.142546e-54 | -8.615850e-47 |
| Msa0062220 | Msa1018790 | 0.802220 | 6.222446e-49 | -8.615850e-47 |
| Msa0062220 | Msa1019020 | 0.811336 | 7.365928e-51 | -8.615850e-47 |
| Msa0062220 | Msa1020710 | 0.822354 | 2.476995e-53 | -8.615850e-47 |
| Msa0062220 | Msa1024140 | 0.849056 | 4.131151e-60 | -8.615850e-47 |
| Msa0062220 | Msa1036390 | 0.829366 | 5.359607e-55 | -8.615850e-47 |
| Msa0062220 | Msa1037000 | 0.842947 | 1.894343e-58 | -8.615850e-47 |
| Msa0062220 | Msa1038050 | 0.814962 | 1.179394e-51 | -8.615850e-47 |
| Msa0062220 | Msa1040120 | 0.855597 | 5.670159e-62 | -8.615850e-47 |
| Msa0062220 | Msa1044340 | 0.825150 | 5.484051e-54 | -8.615850e-47 |
| Msa0062220 | Msa1055280 | 0.801322 | 9.509459e-49 | -8.615850e-47 |
| Msa0062220 | Msa1073110 | -0.807165 | 5.776215e-50 | -8.615850e-47 |
| Msa0062220 | Msa1073840 | 0.821646 | 3.614073e-53 | -8.615850e-47 |
| Msa0062220 | Msa1076680 | 0.828571 | 8.348090e-55 | -8.615850e-47 |
| Msa0062220 | Msa1083410 | 0.808013 | 3.814407e-50 | -8.615850e-47 |
| Msa0062220 | Msa1099030 | 0.822701 | 2.057457e-53 | -8.615850e-47 |
| Msa0062220 | Msa1105290 | 0.807047 | 6.115542e-50 | -8.615850e-47 |
| Msa0062220 | Msa1107970 | 0.849305 | 3.521906e-60 | -8.615850e-47 |
| Msa0062220 | Msa1115330 | 0.843719 | 1.178992e-58 | -8.615850e-47 |
| Msa0062220 | Msa1128160 | 0.832545 | 8.892286e-56 | -8.615850e-47 |
| Msa0062220 | Msa1129560 | 0.808910 | 2.455565e-50 | -8.615850e-47 |
| Msa0062220 | Msa1129720 | 0.811009 | 8.675261e-51 | -8.615850e-47 |
| Msa0062220 | Msa1133660 | 0.808521 | 2.973151e-50 | -8.615850e-47 |
| Msa0062220 | Msa1147570 | 0.816976 | 4.188741e-52 | -8.615850e-47 |
| Msa0062220 | Msa1151960 | 0.870659 | 1.234750e-66 | -8.615850e-47 |
| Msa0062220 | Msa1165360 | 0.827879 | 1.225992e-54 | -8.615850e-47 |
| Msa0062220 | Msa1171690 | 0.811101 | 8.285486e-51 | -8.615850e-47 |
| Msa0062220 | Msa1173020 | 0.832059 | 1.173101e-55 | -8.615850e-47 |
| Msa0062220 | Msa1183390 | 0.815546 | 8.747820e-52 | -8.615850e-47 |
| Msa0062220 | Msa1186210 | 0.803001 | 4.292194e-49 | -8.615850e-47 |
| Msa0062220 | Msa1210770 | 0.812017 | 5.237618e-51 | -8.615850e-47 |
| Msa0062220 | Msa1220230 | 0.804326 | 2.278972e-49 | -8.615850e-47 |
| Msa0062220 | Msa1221560 | 0.826347 | 2.852388e-54 | -8.615850e-47 |
| Msa0062220 | Msa1237030 | 0.812706 | 3.703588e-51 | -8.615850e-47 |
| Msa0062220 | Msa1242330 | 0.803866 | 2.841741e-49 | -8.615850e-47 |
| Msa0062220 | Msa1261340 | 0.838039 | 3.644290e-57 | -8.615850e-47 |
| Msa0062220 | Msa1261360 | 0.863739 | 2.007381e-64 | -8.615850e-47 |
| Msa0062220 | Msa1261370 | 0.849027 | 4.209194e-60 | -8.615850e-47 |
| Msa0062220 | Msa1261400 | 0.862015 | 6.835321e-64 | -8.615850e-47 |
| Msa0062220 | Msa1265960 | 0.806924 | 6.495344e-50 | -8.615850e-47 |
| Msa0062220 | Msa1269080 | 0.814967 | 1.176391e-51 | -8.615850e-47 |
| Msa0062220 | Msa1271510 | 0.804190 | 2.433504e-49 | -8.615850e-47 |
| Msa0062220 | Msa1281720 | 0.815600 | 8.506731e-52 | -8.615850e-47 |
| Msa0062220 | Msa1284030 | 0.809556 | 1.785240e-50 | -8.615850e-47 |
| Msa0062220 | Msa1309360 | 0.816267 | 6.037822e-52 | -8.615850e-47 |
| Msa0062220 | Msa1321000 | 0.806824 | 6.820096e-50 | -8.615850e-47 |
| Msa0062220 | Msa1323060 | 0.825878 | 3.685616e-54 | -8.615850e-47 |
| Msa0062220 | Msa1362510 | 0.808170 | 3.532803e-50 | -8.615850e-47 |
| Msa0062220 | Msa1364470 | -0.813314 | 2.724639e-51 | -8.615850e-47 |
| Msa0062220 | Msa1373510 | 0.800652 | 1.303430e-48 | -8.615850e-47 |
| Msa0062220 | Msa1385900 | 0.832623 | 8.504225e-56 | -8.615850e-47 |
| Msa0062220 | Msa1390310 | 0.827830 | 1.259793e-54 | -8.615850e-47 |
| Msa0062220 | Msa1397460 | 0.810282 | 1.245322e-50 | -8.615850e-47 |
| Msa0062220 | Msa1398480 | 0.819192 | 1.321132e-52 | -8.615850e-47 |
| Msa0062220 | Msa1414320 | 0.803676 | 3.111333e-49 | -8.615850e-47 |
| Msa0062220 | Msa1427390 | 0.868740 | 5.216148e-66 | -8.615850e-47 |
| Msa0062220 | Msa1429830 | 0.837424 | 5.242491e-57 | -8.615850e-47 |
| Msa0062220 | Msa1431000 | 0.803328 | 3.673348e-49 | -8.615850e-47 |
| Msa0062220 | Msa1435670 | 0.844859 | 5.822139e-59 | -8.615850e-47 |
| Msa0062220 | Msa1447230 | 0.826376 | 2.806157e-54 | -8.615850e-47 |
| Msa0062220 | Msa1463970 | 0.839188 | 1.839557e-57 | -8.615850e-47 |
| Msa0062220 | Msa1464730 | 0.816168 | 6.355105e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062220 | MtrunA17_Chr1g0162621 | 87.330 | 663 | 18 | 3 | 1 | 599 | 1 | 661 | 0.0 | 1166 |
| Msa0062220 | MtrunA17_Chr4g0034181 | 71.256 | 661 | 122 | 5 | 1 | 597 | 1 | 657 | 0.0 | 969 |
| Msa0062220 | MtrunA17_Chr5g0396691 | 50.604 | 662 | 259 | 4 | 3 | 599 | 4 | 662 | 0.0 | 683 |
| Msa0062220 | MtrunA17_Chr5g0396711 | 50.459 | 654 | 254 | 5 | 5 | 592 | 6 | 655 | 0.0 | 669 |
| Msa0062220 | MtrunA17_Chr8g0388081 | 51.252 | 599 | 225 | 3 | 62 | 595 | 1 | 597 | 0.0 | 630 |
| Msa0062220 | MtrunA17_Chr1g0194371 | 42.727 | 660 | 309 | 6 | 5 | 598 | 4 | 660 | 0.0 | 538 |
| Msa0062220 | MtrunA17_Chr7g0270221 | 43.302 | 642 | 312 | 8 | 5 | 598 | 4 | 641 | 1.23e-178 | 520 |
| Msa0062220 | MtrunA17_Chr1g0205711 | 36.875 | 640 | 319 | 12 | 26 | 593 | 60 | 686 | 1.18e-127 | 391 |
| Msa0062220 | MtrunA17_Chr3g0120731 | 35.948 | 459 | 259 | 11 | 156 | 591 | 280 | 726 | 1.49e-74 | 252 |
| Msa0062220 | MtrunA17_Chr1g0160041 | 33.471 | 484 | 272 | 15 | 139 | 591 | 230 | 694 | 3.44e-69 | 237 |
| Msa0062220 | MtrunA17_Chr3g0124631 | 32.340 | 470 | 275 | 12 | 150 | 591 | 242 | 696 | 1.18e-68 | 236 |
| Msa0062220 | MtrunA17_Chr3g0121931 | 28.425 | 489 | 272 | 17 | 155 | 592 | 259 | 720 | 3.30e-40 | 156 |
| Msa0062220 | MtrunA17_Chr3g0121951 | 28.690 | 481 | 279 | 17 | 155 | 592 | 256 | 715 | 1.24e-38 | 151 |
| Msa0062220 | MtrunA17_Chr8g0377991 | 27.254 | 477 | 287 | 16 | 158 | 592 | 266 | 724 | 3.49e-35 | 141 |
| Msa0062220 | MtrunA17_Chr4g0028411 | 27.164 | 335 | 180 | 12 | 155 | 481 | 186 | 464 | 1.98e-23 | 104 |
| Msa0062220 | MtrunA17_Chr2g0327341 | 26.706 | 337 | 179 | 13 | 155 | 481 | 183 | 461 | 1.93e-21 | 98.2 |
| Msa0062220 | MtrunA17_Chr1g0180541 | 25.000 | 352 | 193 | 14 | 150 | 486 | 180 | 475 | 1.00e-19 | 92.8 |
| Msa0062220 | MtrunA17_Chr8g0370731 | 24.887 | 442 | 225 | 18 | 88 | 481 | 36 | 418 | 1.35e-19 | 92.4 |
| Msa0062220 | MtrunA17_Chr5g0395431 | 26.667 | 345 | 178 | 13 | 158 | 486 | 229 | 514 | 5.28e-18 | 87.8 |
| Msa0062220 | MtrunA17_Chr4g0000461 | 27.193 | 342 | 186 | 11 | 155 | 486 | 180 | 468 | 1.10e-15 | 80.1 |
| Msa0062220 | MtrunA17_Chr8g0370701 | 25.641 | 351 | 175 | 16 | 153 | 481 | 221 | 507 | 2.95e-14 | 75.9 |
| Msa0062220 | MtrunA17_Chr6g0471921 | 23.077 | 364 | 195 | 12 | 157 | 508 | 163 | 453 | 3.09e-14 | 75.5 |
| Msa0062220 | MtrunA17_Chr3g0116251 | 26.923 | 338 | 184 | 11 | 128 | 459 | 177 | 457 | 1.73e-13 | 73.6 |
| Msa0062220 | MtrunA17_Chr1g0186071 | 34.921 | 126 | 78 | 4 | 348 | 472 | 347 | 469 | 1.45e-11 | 67.4 |
| Msa0062220 | MtrunA17_Chr5g0406681 | 32.203 | 118 | 69 | 4 | 375 | 488 | 387 | 497 | 3.59e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062220 | AT1G49430.1 | 59.726 | 658 | 195 | 7 | 9 | 599 | 11 | 665 | 0.0 | 814 |
| Msa0062220 | AT1G64400.1 | 48.933 | 656 | 268 | 4 | 5 | 595 | 6 | 659 | 0.0 | 681 |
| Msa0062220 | AT4G23850.1 | 50.230 | 653 | 257 | 4 | 5 | 592 | 7 | 656 | 0.0 | 674 |
| Msa0062220 | AT4G11030.1 | 50.152 | 660 | 261 | 5 | 5 | 599 | 7 | 663 | 0.0 | 664 |
| Msa0062220 | AT1G49430.2 | 55.960 | 495 | 149 | 6 | 9 | 437 | 11 | 502 | 0.0 | 566 |
| Msa0062220 | AT2G47240.1 | 42.879 | 660 | 307 | 6 | 5 | 598 | 4 | 659 | 0.0 | 540 |
| Msa0062220 | AT2G47240.2 | 42.879 | 660 | 307 | 6 | 5 | 598 | 4 | 659 | 0.0 | 540 |
| Msa0062220 | AT2G47240.3 | 42.879 | 660 | 307 | 6 | 5 | 598 | 4 | 659 | 0.0 | 540 |
| Msa0062220 | AT2G47240.4 | 42.952 | 603 | 275 | 5 | 62 | 598 | 1 | 600 | 7.80e-169 | 494 |
| Msa0062220 | AT3G05970.1 | 38.762 | 614 | 296 | 10 | 48 | 593 | 88 | 689 | 3.88e-134 | 408 |
| Msa0062220 | AT5G27600.1 | 38.374 | 615 | 297 | 11 | 48 | 593 | 88 | 689 | 1.07e-133 | 407 |
| Msa0062220 | AT2G04350.2 | 29.730 | 666 | 338 | 18 | 40 | 591 | 70 | 719 | 3.76e-80 | 267 |
| Msa0062220 | AT2G04350.1 | 29.730 | 666 | 338 | 18 | 40 | 591 | 70 | 719 | 3.76e-80 | 267 |
| Msa0062220 | AT1G77590.2 | 34.924 | 461 | 257 | 12 | 158 | 591 | 100 | 544 | 8.71e-77 | 254 |
| Msa0062220 | AT1G77590.1 | 34.924 | 461 | 257 | 12 | 158 | 591 | 246 | 690 | 3.74e-75 | 253 |
| Msa0062220 | AT3G23790.1 | 27.835 | 485 | 274 | 17 | 158 | 592 | 264 | 722 | 1.45e-38 | 152 |
| Msa0062220 | AT4G14070.1 | 26.875 | 480 | 272 | 18 | 158 | 591 | 280 | 726 | 2.91e-37 | 148 |
| Msa0062220 | AT3G21240.2 | 27.434 | 339 | 183 | 11 | 158 | 486 | 196 | 481 | 4.47e-20 | 94.4 |
| Msa0062220 | AT3G21240.3 | 27.434 | 339 | 183 | 11 | 158 | 486 | 196 | 481 | 4.47e-20 | 94.4 |
| Msa0062220 | AT3G21240.1 | 27.273 | 341 | 185 | 11 | 158 | 488 | 196 | 483 | 4.61e-20 | 94.4 |
| Msa0062220 | AT3G16170.1 | 25.479 | 365 | 203 | 12 | 158 | 505 | 235 | 547 | 8.30e-20 | 94.0 |
| Msa0062220 | AT4G05160.1 | 27.515 | 338 | 175 | 16 | 155 | 481 | 188 | 466 | 8.31e-19 | 90.5 |
| Msa0062220 | AT1G51680.1 | 28.035 | 346 | 186 | 12 | 158 | 493 | 203 | 495 | 7.17e-18 | 87.8 |
| Msa0062220 | AT1G51680.3 | 28.035 | 346 | 186 | 12 | 158 | 493 | 203 | 495 | 7.52e-18 | 87.4 |
| Msa0062220 | AT1G51680.2 | 28.319 | 339 | 180 | 12 | 158 | 486 | 203 | 488 | 7.58e-18 | 87.4 |
| Msa0062220 | AT4G19010.1 | 26.786 | 336 | 190 | 11 | 152 | 481 | 199 | 484 | 5.51e-17 | 84.7 |
| Msa0062220 | AT2G47245.1 | 46.053 | 76 | 41 | 0 | 22 | 97 | 53 | 128 | 1.14e-16 | 77.4 |
| Msa0062220 | AT5G16340.1 | 25.287 | 348 | 188 | 11 | 153 | 486 | 181 | 470 | 2.26e-14 | 76.6 |
| Msa0062220 | AT1G65890.1 | 25.220 | 341 | 170 | 13 | 158 | 475 | 187 | 465 | 3.71e-13 | 72.8 |
| Msa0062220 | AT1G66120.1 | 24.110 | 365 | 184 | 14 | 158 | 501 | 187 | 479 | 3.03e-12 | 69.7 |
Find 161 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTACTTGAAAATCATAATT+TGG | 0.192707 | 1_2:+21468851 | Msa0062210:three_prime_UTR |
| AGGGATCCGCAATAGGATTT+TGG | 0.231454 | 1_2:-21471313 | Msa0062220:CDS |
| AAAGGCAAGACAATACATTT+TGG | 0.247388 | 1_2:-21469667 | Msa0062220:CDS |
| TGTATTCAGATTTGGGTATA+TGG | 0.255174 | 1_2:-21469804 | Msa0062220:intron |
| TTCTGTTCTTTAGGGAAGTT+TGG | 0.261173 | 1_2:-21471917 | Msa0062220:intron |
| CTTCCAAGCATCTGGTTGTT+GGG | 0.271312 | 1_2:+21473955 | None:intergenic |
| TGTCTGTCAACCTAATAATT+TGG | 0.273590 | 1_2:+21471767 | None:intergenic |
| GGTCTTATGGAGTTGCCTTC+TGG | 0.290118 | 1_2:-21474936 | Msa0062220:CDS |
| ATAAATTCTAAGACTACTTT+TGG | 0.291740 | 1_2:+21475186 | None:intergenic |
| AGTCCCCTTGGGATTTCTTC+AGG | 0.293756 | 1_2:-21474908 | Msa0062220:intron |
| TGTCTATTGACCAAATTATT+AGG | 0.302814 | 1_2:-21471777 | Msa0062220:CDS |
| TAACAGACAAAATCAGAAAT+AGG | 0.317940 | 1_2:+21475360 | None:intergenic |
| GCAGCTCAAAGCTATTTATC+TGG | 0.319379 | 1_2:-21469491 | Msa0062220:CDS |
| ATGATAAACTCCACAGCATT+AGG | 0.321331 | 1_2:+21472597 | None:intergenic |
| GAAATCATTGCAGGCGATAT+TGG | 0.325045 | 1_2:-21470055 | Msa0062220:intron |
| TCAGAACTGTACTGACTTGC+AGG | 0.326216 | 1_2:+21475109 | None:intergenic |
| ACTCAAGAGGTTATAGTTGA+TGG | 0.333385 | 1_2:-21470190 | Msa0062220:CDS |
| GCATTTATAATGGCTGTAAA+AGG | 0.334450 | 1_2:+21475302 | None:intergenic |
| ATTCTTAATAATGACACCTT+TGG | 0.336671 | 1_2:+21471822 | None:intergenic |
| TTATGCCAAAGATGGTCTTA+TGG | 0.345504 | 1_2:-21474949 | Msa0062220:CDS |
| TTCTTAATAATGACACCTTT+GGG | 0.350658 | 1_2:+21471823 | None:intergenic |
| CAACTCCATAAGACCATCTT+TGG | 0.351332 | 1_2:+21474944 | None:intergenic |
| TGACATTGTGAAACTGAAAC+TGG | 0.353646 | 1_2:+21475055 | None:intergenic |
| ATGAAACTCTCTCAGCTTAG+AGG | 0.361608 | 1_2:-21469520 | Msa0062220:intron |
| CCTTCCAAGCATCTGGTTGT+TGG | 0.361935 | 1_2:+21473954 | None:intergenic |
| TTCTTTAGGGAAGTTTGGAT+TGG | 0.369117 | 1_2:-21471912 | Msa0062220:intron |
| TTCAGGCAGGACCTTATTCA+TGG | 0.376144 | 1_2:-21473784 | Msa0062220:intron |
| TTCTCATGGCTGATCCCATT+TGG | 0.378749 | 1_2:+21473729 | None:intergenic |
| AAGGCGCAGCTCCGGATAAC+AGG | 0.381647 | 1_2:+21470638 | None:intergenic |
| CTTTATTCTTGCAGGATGTC+AGG | 0.384629 | 1_2:-21471204 | Msa0062220:intron |
| TCCACATTATCACAAGGATA+TGG | 0.393095 | 1_2:-21470574 | Msa0062220:intron |
| TGCAATAGGTCGCCATTATC+TGG | 0.395954 | 1_2:+21471342 | None:intergenic |
| TCCTCAAGAGCCTTTCTGTC+GGG | 0.397134 | 1_2:+21469744 | None:intergenic |
| AAACACTCCTCCACATGAAT+AGG | 0.401909 | 1_2:+21470613 | None:intergenic |
| TTCTGGTTTAGAGTCCCCTT+GGG | 0.408562 | 1_2:-21474919 | Msa0062220:CDS |
| CTTCTGGTTTAGAGTCCCCT+TGG | 0.410896 | 1_2:-21474920 | Msa0062220:CDS |
| GGCGACCTATTGCATCTTCA+AGG | 0.411535 | 1_2:-21471333 | Msa0062220:CDS |
| TCTTTAGGGAAGTTTGGATT+GGG | 0.415694 | 1_2:-21471911 | Msa0062220:intron |
| ATGTACACAAGTGGAACAAC+TGG | 0.419117 | 1_2:-21471850 | Msa0062220:CDS |
| GCAATCATTGCTATTTCAGT+TGG | 0.422460 | 1_2:+21468912 | None:intergenic |
| CAGAAAGGCTCTTGAGGATT+GGG | 0.422632 | 1_2:-21469739 | Msa0062220:CDS |
| TGATAGACTTGTGTTTGATA+AGG | 0.431832 | 1_2:-21470771 | Msa0062220:intron |
| TTATGATGTTTCCATCCAAA+TGG | 0.431856 | 1_2:-21473744 | Msa0062220:CDS |
| AAATCAAGAAGCATTTATAA+TGG | 0.433224 | 1_2:+21475292 | None:intergenic |
| AAAAGCAAAGTTTCATCTGC+TGG | 0.435188 | 1_2:-21470963 | Msa0062220:CDS |
| TCATGTATACGACCAGATAA+TGG | 0.442009 | 1_2:-21471354 | Msa0062220:CDS |
| TTATATGTGAGCCATGAATA+AGG | 0.443315 | 1_2:+21473773 | None:intergenic |
| ACAGAAAGGCTCTTGAGGAT+TGG | 0.443998 | 1_2:-21469740 | Msa0062220:CDS |
| TTTGACGCCTTCCAAGCATC+TGG | 0.449342 | 1_2:+21473947 | None:intergenic |
| ATTCTTACAAGAGTTGCATC+TGG | 0.450932 | 1_2:+21468983 | None:intergenic |
| ATCTTCAAGGGATCCGCAAT+AGG | 0.452207 | 1_2:-21471320 | Msa0062220:CDS |
| AATTTCTCCACGTGGCTCAC+TGG | 0.454045 | 1_2:+21470264 | None:intergenic |
| GGTCTCTTCAATTTAAATGT+TGG | 0.457179 | 1_2:+21469430 | None:intergenic |
| AGAGGAAACTCCTTGTTCTC+TGG | 0.462169 | 1_2:-21470235 | Msa0062220:CDS |
| GTTGATGGTTGGTTTCATAC+AGG | 0.465886 | 1_2:-21470175 | Msa0062220:intron |
| GGTCTTACTGAAAGCTGTGC+TGG | 0.466257 | 1_2:-21470400 | Msa0062220:CDS |
| TACATGAGCAAGAGGAAGAA+AGG | 0.467152 | 1_2:+21471370 | None:intergenic |
| AGCCCCAACAACCAGATGCT+TGG | 0.468239 | 1_2:-21473958 | Msa0062220:CDS |
| TTGGATGAGCTTAAAAGCAC+TGG | 0.469943 | 1_2:-21469648 | Msa0062220:CDS |
| CGCGTTCGTATCCTGTTATC+CGG | 0.470460 | 1_2:-21470649 | Msa0062220:CDS |
| TCAAATTGATGAACTATATG+AGG | 0.472343 | 1_2:-21469151 | Msa0062220:CDS |
| TTGGCAGGGATTCTGTTAAG+AGG | 0.476289 | 1_2:-21473981 | Msa0062220:intron |
| TATGATGTTTCCATCCAAAT+GGG | 0.480057 | 1_2:-21473743 | Msa0062220:CDS |
| CAACTATAACCTCTTGAGTA+AGG | 0.484832 | 1_2:+21470194 | None:intergenic |
| TGAGTCATTCTTGGTGGCTG+TGG | 0.489343 | 1_2:-21469772 | Msa0062220:CDS |
| AATAGGCAAAGGCGCAGCTC+CGG | 0.492905 | 1_2:+21470630 | None:intergenic |
| ATTGATGCCACGGCTTCTCA+TGG | 0.493042 | 1_2:+21473715 | None:intergenic |
| GCTGGGTGTTTCACAGCAAT+CGG | 0.493542 | 1_2:-21470382 | Msa0062220:CDS |
| CCTGGCCTCGATGGTTGTCA+TGG | 0.495595 | 1_2:+21470324 | None:intergenic |
| CACAATGGTGTATGATCCAC+TGG | 0.495644 | 1_2:-21468878 | Msa0062220:three_prime_UTR |
| AGTTTCAATTGCATTTGTAC+AGG | 0.496334 | 1_2:-21472562 | Msa0062220:CDS |
| TTCATGGCTCACATATAAAG+AGG | 0.498137 | 1_2:-21473768 | Msa0062220:CDS |
| AGATCTCTCTCTATGTCAAA+GGG | 0.498603 | 1_2:+21469460 | None:intergenic |
| GGAAGGCCTGCTACATCTGA+TGG | 0.500055 | 1_2:-21475005 | Msa0062220:CDS |
| CATGGCTGATCCCATTTGGA+TGG | 0.504816 | 1_2:+21473733 | None:intergenic |
| TTGTAGTATTTCAGTAATTG+TGG | 0.505813 | 1_2:+21469409 | None:intergenic |
| ATTGGAGAATGGCAACCAAA+TGG | 0.506109 | 1_2:-21470037 | Msa0062220:CDS |
| AGTGCGTCATATCCCATCTC+TGG | 0.507383 | 1_2:+21470289 | None:intergenic |
| ATCTTTATGTGAAAATCTAA+AGG | 0.508165 | 1_2:-21469685 | Msa0062220:CDS |
| CTCTCTATGTCAAAGGGAGT+TGG | 0.511421 | 1_2:+21469466 | None:intergenic |
| GAACTATATGAGGAAGCAAA+AGG | 0.513195 | 1_2:-21469141 | Msa0062220:CDS |
| GGATCCCTTGAAGATGCAAT+AGG | 0.517759 | 1_2:+21471328 | None:intergenic |
| AGATTCAAGCCTGGCCTCGA+TGG | 0.521799 | 1_2:+21470315 | None:intergenic |
| GCTTGAATCTGTACCAGAGA+TGG | 0.522837 | 1_2:-21470302 | Msa0062220:CDS |
| GTCTTACTGAAAGCTGTGCT+GGG | 0.523419 | 1_2:-21470399 | Msa0062220:CDS |
| CTAATACGATCGAAAACTCT+AGG | 0.525017 | 1_2:+21471130 | None:intergenic |
| GCATAAATGCATCTATAGAC+AGG | 0.525270 | 1_2:+21474966 | None:intergenic |
| TTCCAAGCATCTGGTTGTTG+GGG | 0.526086 | 1_2:+21473956 | None:intergenic |
| TTATAATGGCTGTAAAAGGT+TGG | 0.528096 | 1_2:+21475306 | None:intergenic |
| AACACAAGTCTATCAAAGAA+AGG | 0.528426 | 1_2:+21470779 | None:intergenic |
| CCATGACAACCATCGAGGCC+AGG | 0.528881 | 1_2:-21470324 | Msa0062220:CDS |
| AACTCACGGGATTGATGCCA+CGG | 0.531660 | 1_2:+21473705 | None:intergenic |
| TAGATCTCTCTCTATGTCAA+AGG | 0.533185 | 1_2:+21469459 | None:intergenic |
| CTCTGGTACAGATTCAAGCC+TGG | 0.534664 | 1_2:+21470306 | None:intergenic |
| AAGCATACCGATGATATAAG+AGG | 0.536051 | 1_2:+21469917 | None:intergenic |
| AGATGCATTTATGCCAAAGA+TGG | 0.539890 | 1_2:-21474957 | Msa0062220:CDS |
| CCAACAACCAGATGCTTGGA+AGG | 0.540812 | 1_2:-21473954 | Msa0062220:CDS |
| AAGAGGTTATAGTTGATGGT+TGG | 0.543539 | 1_2:-21470186 | Msa0062220:CDS |
| GCAATGCCCTCTTATATCAT+CGG | 0.544084 | 1_2:-21469924 | Msa0062220:intron |
| ACCATATCCTTGTGATAATG+TGG | 0.544732 | 1_2:+21470573 | None:intergenic |
| AGAACAAGGAGTTTCCTCTC+AGG | 0.546548 | 1_2:+21470239 | None:intergenic |
| AAAGGTGCTGCTTTGTGTTG+TGG | 0.547465 | 1_2:+21470797 | None:intergenic |
| GGCCTTCCATCAGATGTAGC+AGG | 0.548577 | 1_2:+21474999 | None:intergenic |
| CAAGTTAAGATATCTAGAGA+AGG | 0.550231 | 1_2:-21470825 | Msa0062220:CDS |
| CTGTGAAAGTTGAGGAAGGA+AGG | 0.550847 | 1_2:-21475022 | Msa0062220:CDS |
| AATATCTTTAAATTATCTCA+AGG | 0.551439 | 1_2:-21469986 | Msa0062220:CDS |
| CTTGAATCTGTACCAGAGAT+GGG | 0.556327 | 1_2:-21470301 | Msa0062220:CDS |
| ATCCTCAAGAGCCTTTCTGT+CGG | 0.564145 | 1_2:+21469743 | None:intergenic |
| CAAATCGACGTTGCATCAGA+TGG | 0.564713 | 1_2:+21469089 | None:intergenic |
| AAGAGTTGCATCTGGAGTTG+CGG | 0.565603 | 1_2:+21468991 | None:intergenic |
| CCCCGACAGAAAGGCTCTTG+AGG | 0.568269 | 1_2:-21469745 | Msa0062220:CDS |
| CCTCAAGAGCCTTTCTGTCG+GGG | 0.569393 | 1_2:+21469745 | None:intergenic |
| TGTGGTAGTCCCCGACAGAA+AGG | 0.569904 | 1_2:-21469754 | Msa0062220:CDS |
| TATACTGTGAAAGTTGAGGA+AGG | 0.570953 | 1_2:-21475026 | Msa0062220:CDS |
| GCCTTTGCCTATTCATGTGG+AGG | 0.572128 | 1_2:-21470620 | Msa0062220:CDS |
| TGCACAATAATGTACACAAG+TGG | 0.574901 | 1_2:-21471859 | Msa0062220:CDS |
| AGCATACCGATGATATAAGA+GGG | 0.579755 | 1_2:+21469918 | None:intergenic |
| GTGTCTGAACATCTTCAAGC+AGG | 0.580383 | 1_2:+21471179 | None:intergenic |
| ATCATAATTTGGTTAGCCAG+TGG | 0.582079 | 1_2:+21468862 | Msa0062210:three_prime_UTR |
| TGCGCCTTTGCCTATTCATG+TGG | 0.582303 | 1_2:-21470623 | Msa0062220:CDS |
| TTTCAGTTTCACAATGTCAG+AGG | 0.582437 | 1_2:-21475051 | Msa0062220:exon |
| TTGCAGGCGATATTGGAGAA+TGG | 0.585107 | 1_2:-21470048 | Msa0062220:intron |
| CTGGCCTCGATGGTTGTCAT+GGG | 0.586370 | 1_2:+21470325 | None:intergenic |
| CTGATGGAAGGCCATCAGTA+GGG | 0.588596 | 1_2:-21474989 | Msa0062220:CDS |
| CTATAGACAGGCCCTACTGA+TGG | 0.590521 | 1_2:+21474978 | None:intergenic |
| GGTTTATACTGTGAAAGTTG+AGG | 0.592335 | 1_2:-21475030 | Msa0062220:CDS |
| AAGTTAAGATATCTAGAGAA+GGG | 0.592630 | 1_2:-21470824 | Msa0062220:CDS |
| TATTAGGTTGACAGACAAAG+TGG | 0.595571 | 1_2:-21471761 | Msa0062220:intron |
| TCTGATGGAAGGCCATCAGT+AGG | 0.596037 | 1_2:-21474990 | Msa0062220:CDS |
| GCGACAAGACCTTACTCAAG+AGG | 0.596877 | 1_2:-21470203 | Msa0062220:CDS |
| CGTGGAGAAATTTGCCTGAG+AGG | 0.601376 | 1_2:-21470253 | Msa0062220:CDS |
| CTCAGGCAAATTTCTCCACG+TGG | 0.603950 | 1_2:+21470256 | None:intergenic |
| GCGACCTATTGCATCTTCAA+GGG | 0.606972 | 1_2:-21471332 | Msa0062220:CDS |
| TGAGGAAGCAAAAGGAACAA+AGG | 0.608554 | 1_2:-21469133 | Msa0062220:CDS |
| GTCTGTTAGAATAGTGACAA+AGG | 0.612968 | 1_2:-21475345 | Msa0062220:five_prime_UTR |
| GGCCTGCTACATCTGATGGA+AGG | 0.614561 | 1_2:-21475001 | Msa0062220:CDS |
| ACGTTGCATCAGATGGCCAC+AGG | 0.620014 | 1_2:+21469096 | None:intergenic |
| TGGTCGTATACATGAGCAAG+AGG | 0.622399 | 1_2:+21471362 | None:intergenic |
| TGGTAGACAAAACAAGCGCT+AGG | 0.626047 | 1_2:-21470676 | Msa0062220:intron |
| ATGCAATTGAAACTTCAGCA+TGG | 0.627938 | 1_2:+21472571 | None:intergenic |
| CAGAACTGTACTGACTTGCA+GGG | 0.629002 | 1_2:+21475110 | None:intergenic |
| GGATCAGCCATGAGAAGCCG+TGG | 0.629504 | 1_2:-21473722 | Msa0062220:CDS |
| CTTGTGATAACCAGAGAACA+AGG | 0.630070 | 1_2:+21470225 | None:intergenic |
| CAAGGGGACTCTAAACCAGA+AGG | 0.631617 | 1_2:+21474921 | None:intergenic |
| GTACATTATTGTGCAAATGT+CGG | 0.632622 | 1_2:+21471867 | None:intergenic |
| TCCTCCACATGAATAGGCAA+AGG | 0.633863 | 1_2:+21470619 | None:intergenic |
| GCCTTGCCAAAATCCTATTG+CGG | 0.638671 | 1_2:+21471307 | None:intergenic |
| ACAATTACTGAAATACTACA+AGG | 0.640007 | 1_2:-21469407 | Msa0062220:intron |
| AGTGACCTGAAGAAATCCCA+AGG | 0.641289 | 1_2:+21474903 | None:intergenic |
| GGAACACCACAAAATATAGT+CGG | 0.646136 | 1_2:+21471151 | None:intergenic |
| CTTAACAGGTCCTAATGCTG+TGG | 0.657892 | 1_2:-21472607 | Msa0062220:intron |
| GAGTGTTTGAGAGTCACTAG+TGG | 0.663036 | 1_2:-21470598 | Msa0062220:CDS |
| GTGACCTGAAGAAATCCCAA+GGG | 0.664419 | 1_2:+21474904 | None:intergenic |
| GGCATGAGTATAGTGTCCTG+TGG | 0.679330 | 1_2:-21469112 | Msa0062220:exon |
| TAGACAAAACAAGCGCTAGG+TGG | 0.692819 | 1_2:-21470673 | Msa0062220:CDS |
| GGAACAACTGGAGAACCCAA+AGG | 0.705395 | 1_2:-21471838 | Msa0062220:CDS |
| AGTGGATCCACATTATCACA+AGG | 0.714395 | 1_2:-21470580 | Msa0062220:CDS |
| TTGCACTTCAAGAAACACAA+TGG | 0.715704 | 1_2:-21468893 | Msa0062220:three_prime_UTR |
| AATTCCCATGACAACCATCG+AGG | 0.735979 | 1_2:-21470329 | Msa0062220:CDS |
| GCACTTTCCAGTGAGCCACG+TGG | 0.753683 | 1_2:-21470271 | Msa0062220:CDS |
| TGACCTGAAGAAATCCCAAG+GGG | 0.758731 | 1_2:+21474905 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATGAAAACAATATTTT+TGG | + | chr1_2:21469788-21469807 | None:intergenic | 10.0% |
| !! | TAACAAATACAATTAATTTA+GGG | + | chr1_2:21471071-21471090 | None:intergenic | 10.0% |
| !! | TTAACAAATACAATTAATTT+AGG | + | chr1_2:21471072-21471091 | None:intergenic | 10.0% |
| !! | CATAATTAGTATTAACAAAT+TGG | + | chr1_2:21470089-21470108 | None:intergenic | 15.0% |
| !!! | AATTATGTTACTTTAACTTA+TGG | - | chr1_2:21470102-21470121 | Msa0062220:intron | 15.0% |
| !!! | TTTTATCTTAGAAGTTTTTA+TGG | - | chr1_2:21470228-21470247 | Msa0062220:CDS | 15.0% |
| !! | GAAATTTATTATCTGATTAA+TGG | - | chr1_2:21470649-21470668 | Msa0062220:CDS | 15.0% |
| !! | CAAAATTGTGAATATTTATA+GGG | + | chr1_2:21470811-21470830 | None:intergenic | 15.0% |
| !! | ACAAAATTGTGAATATTTAT+AGG | + | chr1_2:21470812-21470831 | None:intergenic | 15.0% |
| !!! | AAGTGTGATTTTATTTTATA+GGG | + | chr1_2:21470842-21470861 | None:intergenic | 15.0% |
| !!! | AAAGTGTGATTTTATTTTAT+AGG | + | chr1_2:21470843-21470862 | None:intergenic | 15.0% |
| !!! | AAAAATTTCATCAACATTTT+TGG | + | chr1_2:21470902-21470921 | None:intergenic | 15.0% |
| !!! | TGTTGATGAAATTTTTTTAT+AGG | - | chr1_2:21470906-21470925 | Msa0062220:intron | 15.0% |
| !!! | GTTGATGAAATTTTTTTATA+GGG | - | chr1_2:21470907-21470926 | Msa0062220:intron | 15.0% |
| !!! | AAAGTGTGATTTATTTTTAT+AGG | - | chr1_2:21470996-21471015 | Msa0062220:intron | 15.0% |
| !!! | AAGTGTGATTTATTTTTATA+GGG | - | chr1_2:21470997-21471016 | Msa0062220:intron | 15.0% |
| !!! | ACAATTTTCTTTAAACTTTA+AGG | - | chr1_2:21472507-21472526 | Msa0062220:intron | 15.0% |
| !!! | TACTTTTCTAATAAGTTTAT+AGG | - | chr1_2:21472577-21472596 | Msa0062220:CDS | 15.0% |
| !! | ATAAGTTTATAGGTATTTAT+AGG | - | chr1_2:21472587-21472606 | Msa0062220:CDS | 15.0% |
| !! | TAATAGAATATTATGCTTTA+TGG | - | chr1_2:21472665-21472684 | Msa0062220:intron | 15.0% |
| !!! | TACAACATTGTAATATTTTT+AGG | - | chr1_2:21472815-21472834 | Msa0062220:intron | 15.0% |
| !!! | TAAAATAATATTGGTTTTGT+TGG | - | chr1_2:21473542-21473561 | Msa0062220:intron | 15.0% |
| !! | AATATCTTTAAATTATCTCA+AGG | - | chr1_2:21474252-21474271 | Msa0062220:intron | 15.0% |
| !! | TATGAACTCTAATTAAATAT+TGG | - | chr1_2:21475010-21475029 | Msa0062220:CDS | 15.0% |
| !!! | AAATCAAGAAGCATTTATAA+TGG | + | chr1_2:21468949-21468968 | None:intergenic | 20.0% |
| !!! | ATAAATTCTAAGACTACTTT+TGG | + | chr1_2:21469055-21469074 | None:intergenic | 20.0% |
| !!! | TTTTATATAACCAATTGTTC+AGG | - | chr1_2:21469649-21469668 | Msa0062220:CDS | 20.0% |
| !! | AGTTAATGAAAACAACATTT+AGG | + | chr1_2:21469811-21469830 | None:intergenic | 20.0% |
| !! | ACTTGACAATGAATTTAATT+AGG | - | chr1_2:21469965-21469984 | Msa0062220:CDS | 20.0% |
| !! | ACATGTATAATAGTAGTATT+TGG | - | chr1_2:21470195-21470214 | Msa0062220:CDS | 20.0% |
| !! | AAACTACAACAAAGAATAAA+CGG | + | chr1_2:21470362-21470381 | None:intergenic | 20.0% |
| !! | TAAAGATTTCACAATTTAAC+AGG | + | chr1_2:21470413-21470432 | None:intergenic | 20.0% |
| !!! | ATTAATGGTTTTATGTTACT+AGG | - | chr1_2:21470664-21470683 | Msa0062220:CDS | 20.0% |
| !!! | TTAATGGTTTTATGTTACTA+GGG | - | chr1_2:21470665-21470684 | Msa0062220:CDS | 20.0% |
| !!! | TCGTTGTTATTGTAAATTAA+TGG | - | chr1_2:21470767-21470786 | Msa0062220:intron | 20.0% |
| !!! | CGTTGTTATTGTAAATTAAT+GGG | - | chr1_2:21470768-21470787 | Msa0062220:intron | 20.0% |
| !!! | ATGCTGATGAAAATTTTATA+AGG | - | chr1_2:21470937-21470956 | Msa0062220:CDS | 20.0% |
| !!! | TTTAGGGTTAATTAAGTTTT+TGG | + | chr1_2:21471055-21471074 | None:intergenic | 20.0% |
| !! | CAAAATAGTAAAATTGAATC+AGG | + | chr1_2:21471114-21471133 | None:intergenic | 20.0% |
| !!! | ATTCAATTTTACTATTTTGC+AGG | - | chr1_2:21471115-21471134 | Msa0062220:intron | 20.0% |
| !!! | AACAAATTTTTGTTCAGTAA+GGG | + | chr1_2:21471813-21471832 | None:intergenic | 20.0% |
| !!! | AAACAAATTTTTGTTCAGTA+AGG | + | chr1_2:21471814-21471833 | None:intergenic | 20.0% |
| !! | TACTGAAAAATTGAATGAAT+TGG | + | chr1_2:21472559-21472578 | None:intergenic | 20.0% |
| !!! | TGCATATCAATATTTTCAAA+AGG | + | chr1_2:21472621-21472640 | None:intergenic | 20.0% |
| !! | CTATATAGTTTCACAAATAT+AGG | + | chr1_2:21472780-21472799 | None:intergenic | 20.0% |
| !! | AATCGCAACTAAAATAATAT+TGG | - | chr1_2:21473533-21473552 | Msa0062220:intron | 20.0% |
| !!! | CATATACTATTTCTCATAAA+AGG | + | chr1_2:21473780-21473799 | None:intergenic | 20.0% |
| !!! | ATCATTTATTTTTTTGTGAC+AGG | - | chr1_2:21473817-21473836 | Msa0062220:intron | 20.0% |
| !! | ATCTTTATGTGAAAATCTAA+AGG | - | chr1_2:21474553-21474572 | Msa0062220:intron | 20.0% |
| !! | CAAAATCATATATACATACT+TGG | + | chr1_2:21474625-21474644 | None:intergenic | 20.0% |
| !! | ACTATAATCCAAATTAGTTA+AGG | + | chr1_2:21474944-21474963 | None:intergenic | 20.0% |
| !! | TAACTAATTTGGATTATAGT+AGG | - | chr1_2:21474944-21474963 | Msa0062220:CDS | 20.0% |
| ! | TAACAGACAAAATCAGAAAT+AGG | + | chr1_2:21468881-21468900 | None:intergenic | 25.0% |
| ! | ATGATTCAAGTAATAGTGAA+GGG | + | chr1_2:21469097-21469116 | None:intergenic | 25.0% |
| ! | AATGATTCAAGTAATAGTGA+AGG | + | chr1_2:21469098-21469117 | None:intergenic | 25.0% |
| ! | TGACAATGAATTTAATTAGG+TGG | - | chr1_2:21469968-21469987 | Msa0062220:CDS | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | - | chr1_2:21470874-21470893 | Msa0062220:intron | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | - | chr1_2:21470875-21470894 | Msa0062220:intron | 25.0% |
| !! | TTTAGTCCCTACAAAATTTT+CGG | + | chr1_2:21470977-21470996 | None:intergenic | 25.0% |
| ! | ACAAAACTGCAGATATTTAT+AGG | - | chr1_2:21471027-21471046 | Msa0062220:intron | 25.0% |
| ! | CAAAACTGCAGATATTTATA+GGG | - | chr1_2:21471028-21471047 | Msa0062220:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | + | chr1_2:21471221-21471240 | None:intergenic | 25.0% |
| !! | TGTTTTCTTAATGTTCCATA+AGG | - | chr1_2:21471319-21471338 | Msa0062220:CDS | 25.0% |
| ! | TTTGGACGAATAAAATTCTA+TGG | - | chr1_2:21471407-21471426 | Msa0062220:intron | 25.0% |
| ! | AGAAATCACATTATCTTGTT+TGG | + | chr1_2:21471529-21471548 | None:intergenic | 25.0% |
| ! | GTTCTTCAAATCTAAAAAGT+AGG | - | chr1_2:21471862-21471881 | Msa0062220:CDS | 25.0% |
| ! | CAAACAAATAAACCTTAATC+TGG | + | chr1_2:21471918-21471937 | None:intergenic | 25.0% |
| ! | TTCTTAATAATGACACCTTT+GGG | + | chr1_2:21472418-21472437 | None:intergenic | 25.0% |
| ! | ATTCTTAATAATGACACCTT+TGG | + | chr1_2:21472419-21472438 | None:intergenic | 25.0% |
| ! | TGTCTATTGACCAAATTATT+AGG | - | chr1_2:21472461-21472480 | Msa0062220:intron | 25.0% |
| ! | AATATTCTCTTTATTCTTGC+AGG | - | chr1_2:21473026-21473045 | Msa0062220:intron | 25.0% |
| !! | ACTATATGCTTTTCAAATGT+AGG | - | chr1_2:21473248-21473267 | Msa0062220:intron | 25.0% |
| !!! | ATATCTTAACTTGCTGTTAA+TGG | + | chr1_2:21473406-21473425 | None:intergenic | 25.0% |
| ! | AAGTTAAGATATCTAGAGAA+GGG | - | chr1_2:21473414-21473433 | Msa0062220:intron | 25.0% |
| ! | TGAGACAACTTGAATAATAT+AGG | + | chr1_2:21474128-21474147 | None:intergenic | 25.0% |
| !!! | TATTATTCAAGTTGTCTCAT+TGG | - | chr1_2:21474129-21474148 | Msa0062220:intron | 25.0% |
| !!! | TAACATTTTGAAATCATTGC+AGG | - | chr1_2:21474174-21474193 | Msa0062220:intron | 25.0% |
| !! | TTTTCTGTCAATGATTTTCA+TGG | + | chr1_2:21474229-21474248 | None:intergenic | 25.0% |
| ! | TTGTAGTATTTCAGTAATTG+TGG | + | chr1_2:21474832-21474851 | None:intergenic | 25.0% |
| ! | ACAATTACTGAAATACTACA+AGG | - | chr1_2:21474831-21474850 | Msa0062220:intron | 25.0% |
| ! | TCTTGATTCCTTAACTAATT+TGG | - | chr1_2:21474933-21474952 | Msa0062220:CDS | 25.0% |
| ! | TATAGTAGGATTTCACAATT+TGG | - | chr1_2:21474958-21474977 | Msa0062220:CDS | 25.0% |
| ! | TCAAATTGATGAACTATATG+AGG | - | chr1_2:21475087-21475106 | Msa0062220:five_prime_UTR | 25.0% |
| TTATAATGGCTGTAAAAGGT+TGG | + | chr1_2:21468935-21468954 | None:intergenic | 30.0% | |
| GCATTTATAATGGCTGTAAA+AGG | + | chr1_2:21468939-21468958 | None:intergenic | 30.0% | |
| AATGAAATCTGCAGCAAAAA+AGG | + | chr1_2:21469163-21469182 | None:intergenic | 30.0% | |
| !! | TAATGCATGACTTTTTCTGT+TGG | - | chr1_2:21469471-21469490 | Msa0062220:CDS | 30.0% |
| TTTAAGGACAATCCTTTCTT+AGG | - | chr1_2:21469499-21469518 | Msa0062220:CDS | 30.0% | |
| AACTATAGCTTATGAACACA+AGG | - | chr1_2:21469827-21469846 | Msa0062220:intron | 30.0% | |
| ATGAACCTATCGAAAAGATA+AGG | + | chr1_2:21470171-21470190 | None:intergenic | 30.0% | |
| ! | GAAGTTTTTATGGTTTCCTT+TGG | - | chr1_2:21470238-21470257 | Msa0062220:CDS | 30.0% |
| ! | AACATTGAGCTTGAATTTTC+AGG | - | chr1_2:21470437-21470456 | Msa0062220:intron | 30.0% |
| TTATATGTGAGCCATGAATA+AGG | + | chr1_2:21470468-21470487 | None:intergenic | 30.0% | |
| TTATGATGTTTCCATCCAAA+TGG | - | chr1_2:21470494-21470513 | Msa0062220:intron | 30.0% | |
| TATGATGTTTCCATCCAAAT+GGG | - | chr1_2:21470495-21470514 | Msa0062220:intron | 30.0% | |
| ! | AGCAAAAAAGTACATGTAAC+TGG | - | chr1_2:21470602-21470621 | Msa0062220:CDS | 30.0% |
| ! | ACACTAACCGAAAATTTTGT+AGG | - | chr1_2:21470967-21470986 | Msa0062220:CDS | 30.0% |
| ! | CACTAACCGAAAATTTTGTA+GGG | - | chr1_2:21470968-21470987 | Msa0062220:CDS | 30.0% |
| ATACCAAGGGAATCATATAA+TGG | + | chr1_2:21471170-21471189 | None:intergenic | 30.0% | |
| AGACAAAAAAGACATACCAA+GGG | + | chr1_2:21471183-21471202 | None:intergenic | 30.0% | |
| AAGACAAAAAAGACATACCA+AGG | + | chr1_2:21471184-21471203 | None:intergenic | 30.0% | |
| GTTTCGTTAATGTTTCCTTA+TGG | + | chr1_2:21471337-21471356 | None:intergenic | 30.0% | |
| ATGTGTATAACAGTGGTATT+TGG | + | chr1_2:21471385-21471404 | None:intergenic | 30.0% | |
| CCAAATTATGTGTATAACAG+TGG | + | chr1_2:21471392-21471411 | None:intergenic | 30.0% | |
| CCACTGTTATACACATAATT+TGG | - | chr1_2:21471389-21471408 | Msa0062220:CDS | 30.0% | |
| CTTATTTGAGCTTATCTACT+GGG | + | chr1_2:21471501-21471520 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | + | chr1_2:21471502-21471521 | None:intergenic | 30.0% | |
| AGTTTCAATTGCATTTGTAC+AGG | - | chr1_2:21471676-21471695 | Msa0062220:intron | 30.0% | |
| AAAGAACAAGAACATACTGA+TGG | + | chr1_2:21471713-21471732 | None:intergenic | 30.0% | |
| TTGTTCAGTAAGGGAAAAAA+TGG | + | chr1_2:21471804-21471823 | None:intergenic | 30.0% | |
| AGTAAATAAGACAACAATGC+TGG | + | chr1_2:21471889-21471908 | None:intergenic | 30.0% | |
| TTTACTCTTAGTCCAGATTA+AGG | - | chr1_2:21471903-21471922 | Msa0062220:CDS | 30.0% | |
| GTTTGTCAAACATTAAGTAG+AGG | + | chr1_2:21471943-21471962 | None:intergenic | 30.0% | |
| AGTCATAGTGTATTAGATTG+CGG | - | chr1_2:21472082-21472101 | Msa0062220:intron | 30.0% | |
| !! | ATAAAGATTTGCTGTGTAAC+CGG | + | chr1_2:21472110-21472129 | None:intergenic | 30.0% |
| CACAGCAAATCTTTATATTG+CGG | - | chr1_2:21472114-21472133 | Msa0062220:intron | 30.0% | |
| ACAGCAAATCTTTATATTGC+GGG | - | chr1_2:21472115-21472134 | Msa0062220:intron | 30.0% | |
| ! | CCACAATGTAAAAGATTTTG+AGG | + | chr1_2:21472183-21472202 | None:intergenic | 30.0% |
| ! | CCTCAAAATCTTTTACATTG+TGG | - | chr1_2:21472180-21472199 | Msa0062220:intron | 30.0% |
| TTCCTATCGGTATTCAAATT+AGG | - | chr1_2:21472245-21472264 | Msa0062220:intron | 30.0% | |
| ! | TCCTTTCTTTTCTGTTCTTT+AGG | - | chr1_2:21472312-21472331 | Msa0062220:intron | 30.0% |
| ! | CCTTTCTTTTCTGTTCTTTA+GGG | - | chr1_2:21472313-21472332 | Msa0062220:intron | 30.0% |
| GTACATTATTGTGCAAATGT+CGG | + | chr1_2:21472374-21472393 | None:intergenic | 30.0% | |
| TGTCTGTCAACCTAATAATT+TGG | + | chr1_2:21472474-21472493 | None:intergenic | 30.0% | |
| ! | CACAAAACTCTTTAGTGTTT+TGG | - | chr1_2:21473349-21473368 | Msa0062220:intron | 30.0% |
| CAAGTTAAGATATCTAGAGA+AGG | - | chr1_2:21473413-21473432 | Msa0062220:intron | 30.0% | |
| AACACAAGTCTATCAAAGAA+AGG | + | chr1_2:21473462-21473481 | None:intergenic | 30.0% | |
| TGATAGACTTGTGTTTGATA+AGG | - | chr1_2:21473467-21473486 | Msa0062220:intron | 30.0% | |
| ! | TGAACTCTTTTTGCAAAGTT+TGG | - | chr1_2:21473507-21473526 | Msa0062220:intron | 30.0% |
| ATTATCACAAGGATATGGTA+TGG | - | chr1_2:21473669-21473688 | Msa0062220:intron | 30.0% | |
| TGATTTATTCCTAGCAATTG+AGG | - | chr1_2:21474091-21474110 | Msa0062220:intron | 30.0% | |
| TTTCTCTGTGTATTCAGATT+TGG | - | chr1_2:21474426-21474445 | Msa0062220:intron | 30.0% | |
| TTCTCTGTGTATTCAGATTT+GGG | - | chr1_2:21474427-21474446 | Msa0062220:intron | 30.0% | |
| TGTATTCAGATTTGGGTATA+TGG | - | chr1_2:21474434-21474453 | Msa0062220:intron | 30.0% | |
| !!! | AAACAGTTTTGAGTCATTCT+TGG | - | chr1_2:21474457-21474476 | Msa0062220:intron | 30.0% |
| ! | AAAGGCAAGACAATACATTT+TGG | - | chr1_2:21474571-21474590 | Msa0062220:intron | 30.0% |
| GGTCTCTTCAATTTAAATGT+TGG | + | chr1_2:21474811-21474830 | None:intergenic | 30.0% | |
| GTCTGTTAGAATAGTGACAA+AGG | - | chr1_2:21468893-21468912 | Msa0062220:three_prime_UTR | 35.0% | |
| TGACATTGTGAAACTGAAAC+TGG | + | chr1_2:21469186-21469205 | None:intergenic | 35.0% | |
| TTTCAGTTTCACAATGTCAG+AGG | - | chr1_2:21469187-21469206 | Msa0062220:intron | 35.0% | |
| GGTTTATACTGTGAAAGTTG+AGG | - | chr1_2:21469208-21469227 | Msa0062220:intron | 35.0% | |
| TATACTGTGAAAGTTGAGGA+AGG | - | chr1_2:21469212-21469231 | Msa0062220:intron | 35.0% | |
| GCATAAATGCATCTATAGAC+AGG | + | chr1_2:21469275-21469294 | None:intergenic | 35.0% | |
| AGATGCATTTATGCCAAAGA+TGG | - | chr1_2:21469281-21469300 | Msa0062220:intron | 35.0% | |
| ! | TTATGCCAAAGATGGTCTTA+TGG | - | chr1_2:21469289-21469308 | Msa0062220:intron | 35.0% |
| ! | TTTTCTGTTGGAGCAGTTTA+AGG | - | chr1_2:21469483-21469502 | Msa0062220:CDS | 35.0% |
| ! | CCTTCAGTTTTTCCTAAGAA+AGG | + | chr1_2:21469514-21469533 | None:intergenic | 35.0% |
| CCTTTCTTAGGAAAAACTGA+AGG | - | chr1_2:21469511-21469530 | Msa0062220:intron | 35.0% | |
| !!! | ATTTTTGGTCTTAATCCTCC+CGG | + | chr1_2:21469773-21469792 | None:intergenic | 35.0% |
| AGATAAGGACTCGTAGAATA+TGG | + | chr1_2:21470156-21470175 | None:intergenic | 35.0% | |
| ! | TTTTTATGGTTTCCTTTGGC+AGG | - | chr1_2:21470242-21470261 | Msa0062220:CDS | 35.0% |
| ! | TTTTATGGTTTCCTTTGGCA+GGG | - | chr1_2:21470243-21470262 | Msa0062220:CDS | 35.0% |
| GCGTCAAAAACTCAATTCTA+AGG | - | chr1_2:21470306-21470325 | Msa0062220:CDS | 35.0% | |
| TTCATGGCTCACATATAAAG+AGG | - | chr1_2:21470470-21470489 | Msa0062220:intron | 35.0% | |
| !! | AAATCACACTTTTTAGTCCC+TGG | - | chr1_2:21470851-21470870 | Msa0062220:intron | 35.0% |
| ATGCTTAAGGAAAATGTCCA+GGG | + | chr1_2:21470871-21470890 | None:intergenic | 35.0% | |
| AATGCTTAAGGAAAATGTCC+AGG | + | chr1_2:21470872-21470891 | None:intergenic | 35.0% | |
| TTTGGTCCCTAAAATGCTTA+AGG | + | chr1_2:21470884-21470903 | None:intergenic | 35.0% | |
| GTTCCATTATATGATTCCCT+TGG | - | chr1_2:21471164-21471183 | Msa0062220:CDS | 35.0% | |
| ! | ACAGTTGATTTAGCCATGTT+TGG | - | chr1_2:21471205-21471224 | Msa0062220:intron | 35.0% |
| ACTTGTGTTTATGCCTTAAC+AGG | - | chr1_2:21471617-21471636 | Msa0062220:intron | 35.0% | |
| ATGATAAACTCCACAGCATT+AGG | + | chr1_2:21471644-21471663 | None:intergenic | 35.0% | |
| ATGCAATTGAAACTTCAGCA+TGG | + | chr1_2:21471670-21471689 | None:intergenic | 35.0% | |
| TCAAGACATGACAAAATCTG+TGG | + | chr1_2:21471837-21471856 | None:intergenic | 35.0% | |
| ATACACTATGACTTACCAAC+TGG | + | chr1_2:21472075-21472094 | None:intergenic | 35.0% | |
| TAACTGCAATTTCAACCACA+TGG | + | chr1_2:21472150-21472169 | None:intergenic | 35.0% | |
| !!! | CCTTGTTTTCATCTTCCTAT+CGG | - | chr1_2:21472232-21472251 | Msa0062220:intron | 35.0% |
| CTCCTAATTTGAATACCGAT+AGG | + | chr1_2:21472250-21472269 | None:intergenic | 35.0% | |
| CCCTAAAGAACAGAAAAGAA+AGG | + | chr1_2:21472316-21472335 | None:intergenic | 35.0% | |
| ! | TTCTGTTCTTTAGGGAAGTT+TGG | - | chr1_2:21472321-21472340 | Msa0062220:intron | 35.0% |
| ! | TTCTTTAGGGAAGTTTGGAT+TGG | - | chr1_2:21472326-21472345 | Msa0062220:intron | 35.0% |
| ! | TCTTTAGGGAAGTTTGGATT+GGG | - | chr1_2:21472327-21472346 | Msa0062220:intron | 35.0% |
| !!! | CAAATGTCGGTCTTCTTTTT+TGG | + | chr1_2:21472361-21472380 | None:intergenic | 35.0% |
| TGCACAATAATGTACACAAG+TGG | - | chr1_2:21472379-21472398 | Msa0062220:intron | 35.0% | |
| !! | TATTAGGTTGACAGACAAAG+TGG | - | chr1_2:21472477-21472496 | Msa0062220:intron | 35.0% |
| TCATGTATACGACCAGATAA+TGG | - | chr1_2:21472884-21472903 | Msa0062220:intron | 35.0% | |
| ! | CTGAAACCGACTATATTTTG+TGG | - | chr1_2:21473081-21473100 | Msa0062220:intron | 35.0% |
| GGAACACCACAAAATATAGT+CGG | + | chr1_2:21473090-21473109 | None:intergenic | 35.0% | |
| CTAATACGATCGAAAACTCT+AGG | + | chr1_2:21473111-21473130 | None:intergenic | 35.0% | |
| AAAAGCAAAGTTTCATCTGC+TGG | - | chr1_2:21473275-21473294 | Msa0062220:intron | 35.0% | |
| !! | AACTTGCTGTTAATGGATTC+TGG | + | chr1_2:21473399-21473418 | None:intergenic | 35.0% |
| TCCACATTATCACAAGGATA+TGG | - | chr1_2:21473664-21473683 | Msa0062220:intron | 35.0% | |
| ! | ACCATATCCTTGTGATAATG+TGG | + | chr1_2:21473668-21473687 | None:intergenic | 35.0% |
| !! | TGTGTTTTCTATGATGGGAA+CGG | - | chr1_2:21473882-21473901 | Msa0062220:intron | 35.0% |
| CAACTATAACCTCTTGAGTA+AGG | + | chr1_2:21474047-21474066 | None:intergenic | 35.0% | |
| ACTCAAGAGGTTATAGTTGA+TGG | - | chr1_2:21474048-21474067 | Msa0062220:intron | 35.0% | |
| !! | AAGAGGTTATAGTTGATGGT+TGG | - | chr1_2:21474052-21474071 | Msa0062220:intron | 35.0% |
| ! | ATGATTTTCATGGCTCCATT+TGG | + | chr1_2:21474219-21474238 | None:intergenic | 35.0% |
| AGCATACCGATGATATAAGA+GGG | + | chr1_2:21474323-21474342 | None:intergenic | 35.0% | |
| AAGCATACCGATGATATAAG+AGG | + | chr1_2:21474324-21474343 | None:intergenic | 35.0% | |
| AAACAGAAATCCACTTACCT+TGG | - | chr1_2:21474380-21474399 | Msa0062220:intron | 35.0% | |
| ATCAACTATTGAAGCAACCA+AGG | + | chr1_2:21474400-21474419 | None:intergenic | 35.0% | |
| ! | GCAGTTGAGCACAATTTTAA+TGG | - | chr1_2:21474521-21474540 | Msa0062220:intron | 35.0% |
| ! | ACCTTATGCTGCTAATTTTC+TGG | - | chr1_2:21474652-21474671 | Msa0062220:intron | 35.0% |
| ACCAGAAAATTAGCAGCATA+AGG | + | chr1_2:21474656-21474675 | None:intergenic | 35.0% | |
| AGATCTCTCTCTATGTCAAA+GGG | + | chr1_2:21474781-21474800 | None:intergenic | 35.0% | |
| TAGATCTCTCTCTATGTCAA+AGG | + | chr1_2:21474782-21474801 | None:intergenic | 35.0% | |
| ATTTACGAACAATGCTTTGC+AGG | - | chr1_2:21475063-21475082 | Msa0062220:five_prime_UTR | 35.0% | |
| GAACTATATGAGGAAGCAAA+AGG | - | chr1_2:21475097-21475116 | Msa0062220:five_prime_UTR | 35.0% | |
| ATTCTTACAAGAGTTGCATC+TGG | + | chr1_2:21475258-21475277 | None:intergenic | 35.0% | |
| !! | GCAATCATTGCTATTTCAGT+TGG | + | chr1_2:21475329-21475348 | None:intergenic | 35.0% |
| TTGCACTTCAAGAAACACAA+TGG | - | chr1_2:21475345-21475364 | Msa0062220:five_prime_UTR | 35.0% | |
| ! | ATCATAATTTGGTTAGCCAG+TGG | + | chr1_2:21475379-21475398 | None:intergenic | 35.0% |
| CAACTCCATAAGACCATCTT+TGG | + | chr1_2:21469297-21469316 | None:intergenic | 40.0% | |
| CTCAGATTCTCCTGAACAAT+TGG | + | chr1_2:21469662-21469681 | None:intergenic | 40.0% | |
| CCTAGGAGATAAGTAAAGTC+TGG | + | chr1_2:21469713-21469732 | None:intergenic | 40.0% | |
| CCAGACTTTACTTATCTCCT+AGG | - | chr1_2:21469710-21469729 | Msa0062220:CDS | 40.0% | |
| TTACCAGAACCCTCTTTCTA+TGG | - | chr1_2:21469744-21469763 | Msa0062220:CDS | 40.0% | |
| TACCAGAACCCTCTTTCTAT+GGG | - | chr1_2:21469745-21469764 | Msa0062220:CDS | 40.0% | |
| CAAGTGCTTGAACGTCATTA+GGG | + | chr1_2:21469950-21469969 | None:intergenic | 40.0% | |
| TCAAGTGCTTGAACGTCATT+AGG | + | chr1_2:21469951-21469970 | None:intergenic | 40.0% | |
| ! | CGAGTCCTTATCTTTTCGAT+AGG | - | chr1_2:21470163-21470182 | Msa0062220:intron | 40.0% |
| !! | TTGAGCTTGAATTTTCAGGC+AGG | - | chr1_2:21470441-21470460 | Msa0062220:intron | 40.0% |
| AGGAAATGCTGAAAACTCAC+GGG | + | chr1_2:21470549-21470568 | None:intergenic | 40.0% | |
| CAGGAAATGCTGAAAACTCA+CGG | + | chr1_2:21470550-21470569 | None:intergenic | 40.0% | |
| AGAGAGAATGTTGAAAGAGC+AGG | + | chr1_2:21470569-21470588 | None:intergenic | 40.0% | |
| TGCTCTTTCAACATTCTCTC+TGG | - | chr1_2:21470568-21470587 | Msa0062220:intron | 40.0% | |
| AATGATCCATTCAGGACAGT+TGG | + | chr1_2:21470714-21470733 | None:intergenic | 40.0% | |
| TCCTGAATGGATCATTGCAA+TGG | - | chr1_2:21470718-21470737 | Msa0062220:intron | 40.0% | |
| TCCATTGCAATGATCCATTC+AGG | + | chr1_2:21470722-21470741 | None:intergenic | 40.0% | |
| TGAATGGATCATTGCAATGG+AGG | - | chr1_2:21470721-21470740 | Msa0062220:intron | 40.0% | |
| ! | CATATCCTCTCCAGAAGTTT+TGG | - | chr1_2:21471563-21471582 | Msa0062220:intron | 40.0% |
| GTTGTAGCTATTGTGAGCTT+TGG | - | chr1_2:21471977-21471996 | Msa0062220:intron | 40.0% | |
| ! | TGTTTCTGCCACACAAAAGA+AGG | - | chr1_2:21472003-21472022 | Msa0062220:intron | 40.0% |
| AGTGTATTAGATTGCGGTTC+CGG | - | chr1_2:21472088-21472107 | Msa0062220:intron | 40.0% | |
| TTACATTGTGGCCACAATTG+CGG | - | chr1_2:21472192-21472211 | Msa0062220:intron | 40.0% | |
| CCGATAGGAAGATGAAAACA+AGG | + | chr1_2:21472235-21472254 | None:intergenic | 40.0% | |
| CGGTATTCAAATTAGGAGCA+TGG | - | chr1_2:21472252-21472271 | Msa0062220:intron | 40.0% | |
| !!! | ATGTCGGTCTTCTTTTTTGG+TGG | + | chr1_2:21472358-21472377 | None:intergenic | 40.0% |
| ATGTACACAAGTGGAACAAC+TGG | - | chr1_2:21472388-21472407 | Msa0062220:CDS | 40.0% | |
| TACATGAGCAAGAGGAAGAA+AGG | + | chr1_2:21472871-21472890 | None:intergenic | 40.0% | |
| CTTTATTCTTGCAGGATGTC+AGG | - | chr1_2:21473034-21473053 | Msa0062220:intron | 40.0% | |
| ! | GTTTTCGATCGTATTAGTGC+TGG | - | chr1_2:21473114-21473133 | Msa0062220:intron | 40.0% |
| AAACACTCCTCCACATGAAT+AGG | + | chr1_2:21473628-21473647 | None:intergenic | 40.0% | |
| AGTGGATCCACATTATCACA+AGG | - | chr1_2:21473658-21473677 | Msa0062220:intron | 40.0% | |
| ! | GGCGATGTGTTTTCTATGAT+GGG | - | chr1_2:21473877-21473896 | Msa0062220:intron | 40.0% |
| !! | TTTTCTATGATGGGAACGGT+TGG | - | chr1_2:21473886-21473905 | Msa0062220:intron | 40.0% |
| CTTGAATCTGTACCAGAGAT+GGG | - | chr1_2:21473937-21473956 | Msa0062220:CDS | 40.0% | |
| CTTGTGATAACCAGAGAACA+AGG | + | chr1_2:21474016-21474035 | None:intergenic | 40.0% | |
| !! | GTTGATGGTTGGTTTCATAC+AGG | - | chr1_2:21474063-21474082 | Msa0062220:intron | 40.0% |
| !! | TGTCTCATTGGCTCTAAATG+CGG | - | chr1_2:21474141-21474160 | Msa0062220:intron | 40.0% |
| GAAATCATTGCAGGCGATAT+TGG | - | chr1_2:21474183-21474202 | Msa0062220:intron | 40.0% | |
| ATTGGAGAATGGCAACCAAA+TGG | - | chr1_2:21474201-21474220 | Msa0062220:intron | 40.0% | |
| GCAATGCCCTCTTATATCAT+CGG | - | chr1_2:21474314-21474333 | Msa0062220:intron | 40.0% | |
| ATTGAAGCAACCAAGGTAAG+TGG | + | chr1_2:21474393-21474412 | None:intergenic | 40.0% | |
| !!! | CAGTTTTGAGTCATTCTTGG+TGG | - | chr1_2:21474460-21474479 | Msa0062220:intron | 40.0% |
| ! | TTGGATGAGCTTAAAAGCAC+TGG | - | chr1_2:21474590-21474609 | Msa0062220:intron | 40.0% |
| ATGAAACTCTCTCAGCTTAG+AGG | - | chr1_2:21474718-21474737 | Msa0062220:intron | 40.0% | |
| GCAGCTCAAAGCTATTTATC+TGG | - | chr1_2:21474747-21474766 | Msa0062220:intron | 40.0% | |
| ! | CAATTTGGCTTCAATGCATC+AGG | - | chr1_2:21474973-21474992 | Msa0062220:CDS | 40.0% |
| TGAGGAAGCAAAAGGAACAA+AGG | - | chr1_2:21475105-21475124 | Msa0062220:five_prime_UTR | 40.0% | |
| !! | TACTGACTTGCAGGGAATGA+TGG | + | chr1_2:21469123-21469142 | None:intergenic | 45.0% |
| !! | CAGAACTGTACTGACTTGCA+GGG | + | chr1_2:21469131-21469150 | None:intergenic | 45.0% |
| !! | TCAGAACTGTACTGACTTGC+AGG | + | chr1_2:21469132-21469151 | None:intergenic | 45.0% |
| CTGTGAAAGTTGAGGAAGGA+AGG | - | chr1_2:21469216-21469235 | Msa0062220:intron | 45.0% | |
| !! | TTCTGGTTTAGAGTCCCCTT+GGG | - | chr1_2:21469319-21469338 | Msa0062220:intron | 45.0% |
| TGACCTGAAGAAATCCCAAG+GGG | + | chr1_2:21469336-21469355 | None:intergenic | 45.0% | |
| GTGACCTGAAGAAATCCCAA+GGG | + | chr1_2:21469337-21469356 | None:intergenic | 45.0% | |
| AGTGACCTGAAGAAATCCCA+AGG | + | chr1_2:21469338-21469357 | None:intergenic | 45.0% | |
| ATCTGAGTTCGAATCCTGAC+TGG | - | chr1_2:21469675-21469694 | Msa0062220:CDS | 45.0% | |
| ATCCTGACTGGAACAGTCAT+TGG | - | chr1_2:21469687-21469706 | Msa0062220:CDS | 45.0% | |
| ! | GAAAGAGGGTTCTGGTAAGA+CGG | + | chr1_2:21469742-21469761 | None:intergenic | 45.0% |
| ATCCCATAGAAAGAGGGTTC+TGG | + | chr1_2:21469750-21469769 | None:intergenic | 45.0% | |
| AACCCTCTTTCTATGGGATC+CGG | - | chr1_2:21469751-21469770 | Msa0062220:CDS | 45.0% | |
| TGCTTGAACGTCATTAGGGT+CGG | + | chr1_2:21469946-21469965 | None:intergenic | 45.0% | |
| CTTAACAGAATCCCTGCCAA+AGG | + | chr1_2:21470257-21470276 | None:intergenic | 45.0% | |
| TTGGCAGGGATTCTGTTAAG+AGG | - | chr1_2:21470257-21470276 | Msa0062220:CDS | 45.0% | |
| TTCCAAGCATCTGGTTGTTG+GGG | + | chr1_2:21470285-21470304 | None:intergenic | 45.0% | |
| CTTCCAAGCATCTGGTTGTT+GGG | + | chr1_2:21470286-21470305 | None:intergenic | 45.0% | |
| TTCAGGCAGGACCTTATTCA+TGG | - | chr1_2:21470454-21470473 | Msa0062220:intron | 45.0% | |
| TTCTCATGGCTGATCCCATT+TGG | + | chr1_2:21470512-21470531 | None:intergenic | 45.0% | |
| TGTTACTAGGGAGATCACTG+TGG | - | chr1_2:21470677-21470696 | Msa0062220:intron | 45.0% | |
| GGAGATCACTGTGGCATATA+TGG | - | chr1_2:21470686-21470705 | Msa0062220:intron | 45.0% | |
| ! | TGTGTCCAAAACTTCTGGAG+AGG | + | chr1_2:21471571-21471590 | None:intergenic | 45.0% |
| TCGTCTGTGTCCAAAACTTC+TGG | + | chr1_2:21471576-21471595 | None:intergenic | 45.0% | |
| CACAGCATTAGGACCTGTTA+AGG | + | chr1_2:21471633-21471652 | None:intergenic | 45.0% | |
| CTTAACAGGTCCTAATGCTG+TGG | - | chr1_2:21471631-21471650 | Msa0062220:intron | 45.0% | |
| AAGAAGGAAGCCGAGGAATT+TGG | - | chr1_2:21472019-21472038 | Msa0062220:intron | 45.0% | |
| TGGTCGTATACATGAGCAAG+AGG | + | chr1_2:21472879-21472898 | None:intergenic | 45.0% | |
| TGCAATAGGTCGCCATTATC+TGG | + | chr1_2:21472899-21472918 | None:intergenic | 45.0% | |
| GCGACCTATTGCATCTTCAA+GGG | - | chr1_2:21472906-21472925 | Msa0062220:intron | 45.0% | |
| GGATCCCTTGAAGATGCAAT+AGG | + | chr1_2:21472913-21472932 | None:intergenic | 45.0% | |
| ATCTTCAAGGGATCCGCAAT+AGG | - | chr1_2:21472918-21472937 | Msa0062220:intron | 45.0% | |
| ! | AGGGATCCGCAATAGGATTT+TGG | - | chr1_2:21472925-21472944 | Msa0062220:intron | 45.0% |
| !! | TCCGCAATAGGATTTTGGCA+AGG | - | chr1_2:21472930-21472949 | Msa0062220:intron | 45.0% |
| GCCTTGCCAAAATCCTATTG+CGG | + | chr1_2:21472934-21472953 | None:intergenic | 45.0% | |
| GTGTCTGAACATCTTCAAGC+AGG | + | chr1_2:21473062-21473081 | None:intergenic | 45.0% | |
| !! | AAAGGTGCTGCTTTGTGTTG+TGG | + | chr1_2:21473444-21473463 | None:intergenic | 45.0% |
| TGGTAGACAAAACAAGCGCT+AGG | - | chr1_2:21473562-21473581 | Msa0062220:intron | 45.0% | |
| TAGACAAAACAAGCGCTAGG+TGG | - | chr1_2:21473565-21473584 | Msa0062220:intron | 45.0% | |
| TCCTCCACATGAATAGGCAA+AGG | + | chr1_2:21473622-21473641 | None:intergenic | 45.0% | |
| GAGTGTTTGAGAGTCACTAG+TGG | - | chr1_2:21473640-21473659 | Msa0062220:intron | 45.0% | |
| GTCTTACTGAAAGCTGTGCT+GGG | - | chr1_2:21473839-21473858 | Msa0062220:intron | 45.0% | |
| ! | CGGCGATGTGTTTTCTATGA+TGG | - | chr1_2:21473876-21473895 | Msa0062220:intron | 45.0% |
| AATTCCCATGACAACCATCG+AGG | - | chr1_2:21473909-21473928 | Msa0062220:intron | 45.0% | |
| GCTTGAATCTGTACCAGAGA+TGG | - | chr1_2:21473936-21473955 | Msa0062220:CDS | 45.0% | |
| AGAACAAGGAGTTTCCTCTC+AGG | + | chr1_2:21474002-21474021 | None:intergenic | 45.0% | |
| AGAGGAAACTCCTTGTTCTC+TGG | - | chr1_2:21474003-21474022 | Msa0062220:intron | 45.0% | |
| TCACATGTGCCTCAATTGCT+AGG | + | chr1_2:21474103-21474122 | None:intergenic | 45.0% | |
| TTGCAGGCGATATTGGAGAA+TGG | - | chr1_2:21474190-21474209 | Msa0062220:intron | 45.0% | |
| ATCCTCAAGAGCCTTTCTGT+CGG | + | chr1_2:21474498-21474517 | None:intergenic | 45.0% | |
| ACAGAAAGGCTCTTGAGGAT+TGG | - | chr1_2:21474498-21474517 | Msa0062220:intron | 45.0% | |
| CAGAAAGGCTCTTGAGGATT+GGG | - | chr1_2:21474499-21474518 | Msa0062220:intron | 45.0% | |
| CTCTCTATGTCAAAGGGAGT+TGG | + | chr1_2:21474775-21474794 | None:intergenic | 45.0% | |
| CAAATCGACGTTGCATCAGA+TGG | + | chr1_2:21475152-21475171 | None:intergenic | 45.0% | |
| ! | AAGAGTTGCATCTGGAGTTG+CGG | + | chr1_2:21475250-21475269 | None:intergenic | 45.0% |
| CACAATGGTGTATGATCCAC+TGG | - | chr1_2:21475360-21475379 | Msa0062220:five_prime_UTR | 45.0% | |
| TCTGATGGAAGGCCATCAGT+AGG | - | chr1_2:21469248-21469267 | Msa0062220:intron | 50.0% | |
| CTGATGGAAGGCCATCAGTA+GGG | - | chr1_2:21469249-21469268 | Msa0062220:intron | 50.0% | |
| CTATAGACAGGCCCTACTGA+TGG | + | chr1_2:21469263-21469282 | None:intergenic | 50.0% | |
| ! | GGTCTTATGGAGTTGCCTTC+TGG | - | chr1_2:21469302-21469321 | Msa0062220:intron | 50.0% |
| CAAGGGGACTCTAAACCAGA+AGG | + | chr1_2:21469320-21469339 | None:intergenic | 50.0% | |
| !! | CTTCTGGTTTAGAGTCCCCT+TGG | - | chr1_2:21469318-21469337 | Msa0062220:intron | 50.0% |
| AGTCCCCTTGGGATTTCTTC+AGG | - | chr1_2:21469330-21469349 | Msa0062220:intron | 50.0% | |
| TGGTAAGACGGAGTTTGCCT+AGG | + | chr1_2:21469730-21469749 | None:intergenic | 50.0% | |
| ACCCTCTTTCTATGGGATCC+GGG | - | chr1_2:21469752-21469771 | Msa0062220:CDS | 50.0% | |
| TCCCGGATCCCATAGAAAGA+GGG | + | chr1_2:21469756-21469775 | None:intergenic | 50.0% | |
| CCTTCCAAGCATCTGGTTGT+TGG | + | chr1_2:21470287-21470306 | None:intergenic | 50.0% | |
| CCAACAACCAGATGCTTGGA+AGG | - | chr1_2:21470284-21470303 | Msa0062220:CDS | 50.0% | |
| TTTGACGCCTTCCAAGCATC+TGG | + | chr1_2:21470294-21470313 | None:intergenic | 50.0% | |
| CATGGCTGATCCCATTTGGA+TGG | + | chr1_2:21470508-21470527 | None:intergenic | 50.0% | |
| ATTGATGCCACGGCTTCTCA+TGG | + | chr1_2:21470526-21470545 | None:intergenic | 50.0% | |
| AACTCACGGGATTGATGCCA+CGG | + | chr1_2:21470536-21470555 | None:intergenic | 50.0% | |
| ! | ATGGTGCCAACTGTCCTGAA+TGG | - | chr1_2:21470705-21470724 | Msa0062220:intron | 50.0% |
| ! | CTCGGCTTCCTTCTTTTGTG+TGG | + | chr1_2:21472014-21472033 | None:intergenic | 50.0% |
| CACACAAAAGAAGGAAGCCG+AGG | - | chr1_2:21472012-21472031 | Msa0062220:intron | 50.0% | |
| GCAGGATGTGCCAAATTCCT+CGG | + | chr1_2:21472032-21472051 | None:intergenic | 50.0% | |
| TGCGGGAATATACGACCATG+TGG | - | chr1_2:21472132-21472151 | Msa0062220:intron | 50.0% | |
| TTAGTCCGCAACCGCAATTG+TGG | + | chr1_2:21472206-21472225 | None:intergenic | 50.0% | |
| GGAACAACTGGAGAACCCAA+AGG | - | chr1_2:21472400-21472419 | Msa0062220:CDS | 50.0% | |
| GGCGACCTATTGCATCTTCA+AGG | - | chr1_2:21472905-21472924 | Msa0062220:intron | 50.0% | |
| CGCGTTCGTATCCTGTTATC+CGG | - | chr1_2:21473589-21473608 | Msa0062220:intron | 50.0% | |
| TGCGCCTTTGCCTATTCATG+TGG | - | chr1_2:21473615-21473634 | Msa0062220:intron | 50.0% | |
| GCCTTTGCCTATTCATGTGG+AGG | - | chr1_2:21473618-21473637 | Msa0062220:intron | 50.0% | |
| GGTCTTACTGAAAGCTGTGC+TGG | - | chr1_2:21473838-21473857 | Msa0062220:intron | 50.0% | |
| GCTGGGTGTTTCACAGCAAT+CGG | - | chr1_2:21473856-21473875 | Msa0062220:intron | 50.0% | |
| CTCTGGTACAGATTCAAGCC+TGG | + | chr1_2:21473935-21473954 | None:intergenic | 50.0% | |
| AGTGCGTCATATCCCATCTC+TGG | + | chr1_2:21473952-21473971 | None:intergenic | 50.0% | |
| AATTTCTCCACGTGGCTCAC+TGG | + | chr1_2:21473977-21473996 | None:intergenic | 50.0% | |
| CTCAGGCAAATTTCTCCACG+TGG | + | chr1_2:21473985-21474004 | None:intergenic | 50.0% | |
| CGTGGAGAAATTTGCCTGAG+AGG | - | chr1_2:21473985-21474004 | Msa0062220:intron | 50.0% | |
| GCGACAAGACCTTACTCAAG+AGG | - | chr1_2:21474035-21474054 | Msa0062220:intron | 50.0% | |
| ! | TGAGTCATTCTTGGTGGCTG+TGG | - | chr1_2:21474466-21474485 | Msa0062220:intron | 50.0% |
| TCCTCAAGAGCCTTTCTGTC+GGG | + | chr1_2:21474497-21474516 | None:intergenic | 50.0% | |
| GGCATGAGTATAGTGTCCTG+TGG | - | chr1_2:21475126-21475145 | Msa0062220:intron | 50.0% | |
| GGAAGGCCTGCTACATCTGA+TGG | - | chr1_2:21469233-21469252 | Msa0062220:intron | 55.0% | |
| GGCCTGCTACATCTGATGGA+AGG | - | chr1_2:21469237-21469256 | Msa0062220:intron | 55.0% | |
| GGCCTTCCATCAGATGTAGC+AGG | + | chr1_2:21469242-21469261 | None:intergenic | 55.0% | |
| GGCCAATGACTGTTCCAGTC+AGG | + | chr1_2:21469692-21469711 | None:intergenic | 55.0% | |
| CTCCCGGATCCCATAGAAAG+AGG | + | chr1_2:21469757-21469776 | None:intergenic | 55.0% | |
| CTCTTTCTATGGGATCCGGG+AGG | - | chr1_2:21469755-21469774 | Msa0062220:CDS | 55.0% | |
| AGCCCCAACAACCAGATGCT+TGG | - | chr1_2:21470280-21470299 | Msa0062220:CDS | 55.0% | |
| TTGGCACATCCTGCTTCTCC+TGG | - | chr1_2:21472038-21472057 | Msa0062220:intron | 55.0% | |
| TGGCACATCCTGCTTCTCCT+GGG | - | chr1_2:21472039-21472058 | Msa0062220:intron | 55.0% | |
| AAACTCTCCCCAGGAGAAGC+AGG | + | chr1_2:21472050-21472069 | None:intergenic | 55.0% | |
| CAACTGGAGAAACTCTCCCC+AGG | + | chr1_2:21472059-21472078 | None:intergenic | 55.0% | |
| CTGGGGAGAGTTTCTCCAGT+TGG | - | chr1_2:21472057-21472076 | Msa0062220:intron | 55.0% | |
| TGTGGCCACAATTGCGGTTG+CGG | - | chr1_2:21472198-21472217 | Msa0062220:intron | 55.0% | |
| ! | AATAGGCAAAGGCGCAGCTC+CGG | + | chr1_2:21473611-21473630 | None:intergenic | 55.0% |
| CTGGCCTCGATGGTTGTCAT+GGG | + | chr1_2:21473916-21473935 | None:intergenic | 55.0% | |
| AGATTCAAGCCTGGCCTCGA+TGG | + | chr1_2:21473926-21473945 | None:intergenic | 55.0% | |
| TGTGGTAGTCCCCGACAGAA+AGG | - | chr1_2:21474484-21474503 | Msa0062220:intron | 55.0% | |
| CCTCAAGAGCCTTTCTGTCG+GGG | + | chr1_2:21474496-21474515 | None:intergenic | 55.0% | |
| ACGTTGCATCAGATGGCCAC+AGG | + | chr1_2:21475145-21475164 | None:intergenic | 55.0% | |
| GGATCAGCCATGAGAAGCCG+TGG | - | chr1_2:21470516-21470535 | Msa0062220:intron | 60.0% | |
| GGCACATCCTGCTTCTCCTG+GGG | - | chr1_2:21472040-21472059 | Msa0062220:intron | 60.0% | |
| AAGGCGCAGCTCCGGATAAC+AGG | + | chr1_2:21473603-21473622 | None:intergenic | 60.0% | |
| CCTGGCCTCGATGGTTGTCA+TGG | + | chr1_2:21473917-21473936 | None:intergenic | 60.0% | |
| CCATGACAACCATCGAGGCC+AGG | - | chr1_2:21473914-21473933 | Msa0062220:intron | 60.0% | |
| GCACTTTCCAGTGAGCCACG+TGG | - | chr1_2:21473967-21473986 | Msa0062220:CDS | 60.0% | |
| CCCCGACAGAAAGGCTCTTG+AGG | - | chr1_2:21474493-21474512 | Msa0062220:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 21468857 | 21475403 | 21468857 | ID=Msa0062220;Name=Msa0062220 |
| chr1_2 | mRNA | 21468857 | 21475403 | 21468857 | ID=Msa0062220-mRNA-1;Parent=Msa0062220;Name=Msa0062220-mRNA-1;_AED=0.22;_eAED=0.22;_QI=309|0.88|0.88|1|0.88|0.83|18|271|599 |
| chr1_2 | exon | 21468857 | 21469175 | 21468857 | ID=Msa0062220-mRNA-1:exon:7984;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21469408 | 21469527 | 21469408 | ID=Msa0062220-mRNA-1:exon:7983;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21469635 | 21469817 | 21469635 | ID=Msa0062220-mRNA-1:exon:7982;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21469925 | 21470064 | 21469925 | ID=Msa0062220-mRNA-1:exon:7981;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21470176 | 21470421 | 21470176 | ID=Msa0062220-mRNA-1:exon:7980;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21470575 | 21470692 | 21470575 | ID=Msa0062220-mRNA-1:exon:7979;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21470772 | 21470847 | 21470772 | ID=Msa0062220-mRNA-1:exon:7978;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21470924 | 21470990 | 21470924 | ID=Msa0062220-mRNA-1:exon:7977;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21471125 | 21471212 | 21471125 | ID=Msa0062220-mRNA-1:exon:7976;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21471307 | 21471423 | 21471307 | ID=Msa0062220-mRNA-1:exon:7975;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21471762 | 21471926 | 21471762 | ID=Msa0062220-mRNA-1:exon:7974;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21472272 | 21472276 | 21472272 | ID=Msa0062220-mRNA-1:exon:7973;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21472381 | 21472420 | 21472381 | ID=Msa0062220-mRNA-1:exon:7972;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21472545 | 21472621 | 21472545 | ID=Msa0062220-mRNA-1:exon:7971;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21473708 | 21473801 | 21473708 | ID=Msa0062220-mRNA-1:exon:7970;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21473933 | 21473996 | 21473933 | ID=Msa0062220-mRNA-1:exon:7969;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21474909 | 21475129 | 21474909 | ID=Msa0062220-mRNA-1:exon:7968;Parent=Msa0062220-mRNA-1 |
| chr1_2 | exon | 21475164 | 21475403 | 21475164 | ID=Msa0062220-mRNA-1:exon:7967;Parent=Msa0062220-mRNA-1 |
| chr1_2 | five_prime_UTR | 21475164 | 21475403 | 21475164 | ID=Msa0062220-mRNA-1:five_prime_utr;Parent=Msa0062220-mRNA-1 |
| chr1_2 | five_prime_UTR | 21475061 | 21475129 | 21475061 | ID=Msa0062220-mRNA-1:five_prime_utr;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21474909 | 21475060 | 21474909 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21473933 | 21473996 | 21473933 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21473708 | 21473801 | 21473708 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21472545 | 21472621 | 21472545 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21472381 | 21472420 | 21472381 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21472272 | 21472276 | 21472272 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21471762 | 21471926 | 21471762 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21471307 | 21471423 | 21471307 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21471125 | 21471212 | 21471125 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21470924 | 21470990 | 21470924 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21470772 | 21470847 | 21470772 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21470575 | 21470692 | 21470575 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21470176 | 21470421 | 21470176 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21469925 | 21470064 | 21469925 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21469635 | 21469817 | 21469635 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21469408 | 21469527 | 21469408 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | CDS | 21469128 | 21469175 | 21469128 | ID=Msa0062220-mRNA-1:cds;Parent=Msa0062220-mRNA-1 |
| chr1_2 | three_prime_UTR | 21468857 | 21469127 | 21468857 | ID=Msa0062220-mRNA-1:three_prime_utr;Parent=Msa0062220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
