AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1024140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024140 MtrunA17_Chr7g0241831 97.992 498 10 0 1 498 1 498 0.0 1003
Msa1024140 MtrunA17_Chr4g0005991 84.444 495 75 2 3 496 1 494 0.0 840
Msa1024140 MtrunA17_Chr8g0348781 63.211 492 176 4 7 493 8 499 0.0 649
Msa1024140 MtrunA17_Chr1g0170421 55.984 493 211 3 11 498 42 533 0.0 564
Msa1024140 MtrunA17_Chr5g0435581 51.688 474 220 3 24 491 2 472 7.26e-163 470
Msa1024140 MtrunA17_Chr5g0443341 50.313 479 223 7 19 491 60 529 3.55e-155 452
Msa1024140 MtrunA17_Chr3g0096481 48.566 488 227 8 19 495 55 529 3.44e-152 444
Msa1024140 MtrunA17_Chr1g0194391 42.455 497 266 10 9 496 49 534 2.57e-123 371
Msa1024140 MtrunA17_Chr5g0425071 39.800 500 273 7 10 496 2 486 1.67e-116 352
Msa1024140 MtrunA17_Chr3g0096591 54.244 271 123 1 222 491 1 271 1.67e-101 305
Msa1024140 MtrunA17_Chr3g0096581 41.117 197 107 4 19 214 59 247 2.66e-40 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024140 AT2G38110.1 77.778 495 106 2 7 498 8 501 0.0 786
Msa1024140 AT4G00400.1 62.041 490 180 4 7 493 8 494 0.0 609
Msa1024140 AT1G01610.1 61.963 489 179 5 9 493 10 495 0.0 606
Msa1024140 AT3G11430.1 51.452 482 213 4 22 491 9 481 1.18e-163 473
Msa1024140 AT5G06090.1 48.354 486 230 4 18 491 3 479 8.24e-151 440
Msa1024140 AT1G06520.1 46.045 493 241 10 18 491 98 584 1.83e-142 422
Msa1024140 AT1G02390.1 38.086 512 284 11 8 494 27 530 2.52e-105 325
Msa1024140 AT4G01950.1 37.721 509 288 12 2 491 19 517 6.51e-102 315
Msa1024140 AT4G01950.2 37.721 509 288 12 2 491 47 545 2.09e-101 315
Msa1024140 AT3G11325.1 38.043 460 187 10 34 491 6 369 2.41e-87 273
Msa1024140 AT3G11325.2 38.043 460 187 10 34 491 9 372 3.17e-87 273

Find 134 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAAAACACATTAAATT+TGG 0.180394 7_1:+52658003 None:intergenic
TCAGTCTAATTTGCCTGATT+TGG 0.196119 7_1:-52661070 Msa1024140:CDS
TGGAATGTGTTCAATTCTTT+TGG 0.207233 7_1:-52661279 Msa1024140:CDS
CCACTAACTGTAAGCTCTTT+AGG 0.240056 7_1:+52658225 None:intergenic
GCATAATACTTTCCATCTTA+AGG 0.256062 7_1:-52658779 Msa1024140:CDS
CCCAGTTGCCCTTCCCGATT+TGG 0.258883 7_1:+52661155 None:intergenic
GAAAGTGCCACTGCTTTAAT+TGG 0.262083 7_1:+52658522 None:intergenic
TGGTACAATTATAAACTATT+AGG 0.266176 7_1:-52658720 Msa1024140:CDS
TCCTCTGCAGGAAGGGTATA+TGG 0.267172 7_1:-52658931 Msa1024140:intron
AGTGGATCACATTTAATTCT+TGG 0.268820 7_1:+52658906 None:intergenic
GGATTCATGAACACAAAATA+AGG 0.281571 7_1:+52658285 None:intergenic
CAGTCTAATTTGCCTGATTT+GGG 0.282394 7_1:-52661069 Msa1024140:CDS
AGGAGCCTGGTGTTCTTGTT+GGG 0.300559 7_1:-52661125 Msa1024140:CDS
ACCAAATCGGGAAGGGCAAC+TGG 0.300938 7_1:-52661156 Msa1024140:CDS
GAATTGTTGTACTTTGAAAT+TGG 0.303441 7_1:+52661597 None:intergenic
CATAATACTTTCCATCTTAA+GGG 0.319065 7_1:-52658778 Msa1024140:CDS
GGACTTAGAAGTTTAGTTCT+TGG 0.323980 7_1:+52658882 None:intergenic
TAGCCATAGGAATGATAATA+AGG 0.346790 7_1:+52658809 None:intergenic
TCCCTACAAGTTGTTCCTTC+CGG 0.348891 7_1:+52658432 None:intergenic
ATTCCCTTACTACATGCTTA+TGG 0.355427 7_1:-52661508 Msa1024140:CDS
CCTAAAGAGCTTACAGTTAG+TGG 0.359503 7_1:-52658225 Msa1024140:CDS
TATATTCAAAGGGTTCTTGC+TGG 0.360292 7_1:-52658174 Msa1024140:CDS
AGGAATCAAAGTAATTGTTA+AGG 0.363357 7_1:-52658700 Msa1024140:CDS
GTGGTTACAGCAGTTGCATT+AGG 0.369985 7_1:-52658600 Msa1024140:CDS
CGATGGTTTCTGAGACAAAA+AGG 0.373974 7_1:+52661415 None:intergenic
ACGTCCTCAGCGTAGAATTT+CGG 0.374562 7_1:+52661315 None:intergenic
GTAAGAGGATGATTCCTCTT+AGG 0.380558 7_1:+52661466 None:intergenic
GCACCAAGAAAAGGTCAAAA+AGG 0.382407 7_1:-52658663 Msa1024140:CDS
GATAAGTATGCTATGCTTGC+TGG 0.385223 7_1:-52658114 Msa1024140:CDS
ATTAACCGATAGGATTGTTC+CGG 0.386364 7_1:-52658373 Msa1024140:CDS
AAGGAGCCTGGTGTTCTTGT+TGG 0.388349 7_1:-52661126 Msa1024140:CDS
GGAATCAAAGTAATTGTTAA+GGG 0.391051 7_1:-52658699 Msa1024140:CDS
GAATTTGTTGGGAGGTGATA+AGG 0.394560 7_1:-52661202 Msa1024140:CDS
AAGGGCAACTGGGTTTGTTA+AGG 0.407100 7_1:-52661145 Msa1024140:CDS
CCCAACAAATTCTTAACAAA+TGG 0.410137 7_1:+52661213 None:intergenic
TTGCCTTATTATCATTCCTA+TGG 0.412010 7_1:-52658812 Msa1024140:CDS
TAACTATATAGAATTCAAAA+AGG 0.412432 7_1:+52658026 None:intergenic
TCTTAGGAAACTACCGGCTT+CGG 0.414793 7_1:+52661482 None:intergenic
AAATGTGTTATGAGGAGAAA+AGG 0.414960 7_1:+52661714 None:intergenic
TGAAAGGGACGGAGAGTAAG+AGG 0.416211 7_1:+52661451 None:intergenic
AGGGTTCTTGCTGGAACACT+TGG 0.417445 7_1:-52658165 Msa1024140:CDS
ATAAATACTAACCTTGCAAA+TGG 0.421413 7_1:+52661011 None:intergenic
AATGATAATAAGGCAACAAT+AGG 0.421650 7_1:+52658819 None:intergenic
CCATTTGTTAAGAATTTGTT+GGG 0.427000 7_1:-52661213 Msa1024140:CDS
TGAACTTGAGGTGACCAAAT+CGG 0.429869 7_1:-52661169 Msa1024140:CDS
TTGTGATGATGCTCATGAAA+TGG 0.429921 7_1:-52657948 Msa1024140:three_prime_UTR
TTGGGAGGTGATAAGGTGAA+TGG 0.435270 7_1:-52661195 Msa1024140:CDS
CTATCTCCCAGTCCCAAATC+AGG 0.435448 7_1:+52661057 None:intergenic
AGAAGTTTAGTTCTTGGTAG+TGG 0.438170 7_1:+52658888 None:intergenic
GAACTTGAGGTGACCAAATC+GGG 0.438703 7_1:-52661168 Msa1024140:CDS
TAATTTGCCTGATTTGGGAC+TGG 0.444415 7_1:-52661064 Msa1024140:CDS
ACTGGGTTTGTTAAGGAGCC+TGG 0.448681 7_1:-52661138 Msa1024140:CDS
ATGAGGAGAAAAGGAGAAGG+AGG 0.450194 7_1:+52661723 None:intergenic
GCCATTTGTTAAGAATTTGT+TGG 0.451477 7_1:-52661214 Msa1024140:CDS
AATTTGCCTGATTTGGGACT+GGG 0.452524 7_1:-52661063 Msa1024140:CDS
ATGGAAAGTATTATGCCAAT+TGG 0.452627 7_1:+52658786 None:intergenic
TGTTTCGTGTTAATTGCAAC+CGG 0.459361 7_1:+52658354 None:intergenic
CAGTGGCACTTTCAAGAGAA+AGG 0.461557 7_1:-52658512 Msa1024140:CDS
GCGCTGAACCGTAGAAGAAA+TGG 0.471044 7_1:+52658408 None:intergenic
GTAGAGTGAGGTTGAGAAGA+TGG 0.473870 7_1:+52661658 None:intergenic
TTGAACACATTCCACGTCTC+AGG 0.473991 7_1:+52661288 None:intergenic
GTTTAGGTATACCCTTAAGA+TGG 0.476258 7_1:+52658767 None:intergenic
TCATTCCTATGGCTACCAAT+TGG 0.476350 7_1:-52658801 Msa1024140:CDS
ATGCTTATGGCTACCGAAGC+CGG 0.481581 7_1:-52661495 Msa1024140:CDS
GTCCGGAAGGAACAACTTGT+AGG 0.482795 7_1:-52658434 Msa1024140:CDS
AGTGAATGAGGTATTTAGAA+TGG 0.488649 7_1:+52661687 None:intergenic
GTAGGGAACCATTTCTTCTA+CGG 0.489695 7_1:-52658416 Msa1024140:CDS
CACGGCTAGTCCAAGGTTGA+TGG 0.489858 7_1:-52661241 Msa1024140:CDS
CTAAGTCAGATGCAACGGTT+TGG 0.489913 7_1:+52661559 None:intergenic
TTTCTGGTAAGGGAATGTTT+AGG 0.490656 7_1:+52658751 None:intergenic
ACTTTGAAATTGGTTTGAAA+TGG 0.491494 7_1:+52661607 None:intergenic
ACCGTTGCATCTGACTTAGA+TGG 0.496852 7_1:-52661555 Msa1024140:CDS
TGCTTGCTGGTACAGATGGT+AGG 0.502496 7_1:-52658101 Msa1024140:CDS
TGAGGAGAAAAGGAGAAGGA+GGG 0.502630 7_1:+52661724 None:intergenic
AGTTGCAAATTATATTCAAA+GGG 0.504087 7_1:-52658184 Msa1024140:CDS
AAGTTGCAAATTATATTCAA+AGG 0.504845 7_1:-52658185 Msa1024140:CDS
GGAGCCTGGTGTTCTTGTTG+GGG 0.507561 7_1:-52661124 Msa1024140:CDS
AATGGCTCCACCATCAACCT+TGG 0.511121 7_1:+52661231 None:intergenic
ATAAGGAAATTACTTGAAGA+AGG 0.512819 7_1:-52658471 Msa1024140:CDS
TTGATCTTCATAACCTTCGC+AGG 0.513177 7_1:-52661381 Msa1024140:CDS
GAGGAGAAAAGGAGAAGGAG+GGG 0.513481 7_1:+52661725 None:intergenic
GATTCATGAACACAAAATAA+GGG 0.515157 7_1:+52658286 None:intergenic
CCTCCACCAGCACCAAGAAA+AGG 0.520944 7_1:-52658672 Msa1024140:CDS
ACGTTGTCACGGCTAGTCCA+AGG 0.524082 7_1:-52661248 Msa1024140:CDS
TGACTTTATGTCCATTTGCA+AGG 0.526303 7_1:-52661022 Msa1024140:intron
GGTACGTGAAATATATGAAA+GGG 0.527101 7_1:+52661436 None:intergenic
TGGGAGGTGATAAGGTGAAT+GGG 0.527752 7_1:-52661194 Msa1024140:CDS
TAGAGTGAGGTTGAGAAGAT+GGG 0.531254 7_1:+52661659 None:intergenic
GCTTGCTGGTACAGATGGTA+GGG 0.533473 7_1:-52658100 Msa1024140:CDS
TCCGGAAGGAACAACTTGTA+GGG 0.535613 7_1:-52658433 Msa1024140:CDS
ATGACGTGGAGATGGTTTCA+AGG 0.541289 7_1:-52661347 Msa1024140:CDS
AGTGGCACTTTCAAGAGAAA+GGG 0.541416 7_1:-52658511 Msa1024140:CDS
AAGAATGTGATCTCATAAGT+AGG 0.541733 7_1:+52658258 None:intergenic
GTAGCCATAAGCATGTAGTA+AGG 0.544461 7_1:+52661504 None:intergenic
GCTATGCTTGCTGGTACAGA+TGG 0.544625 7_1:-52658105 Msa1024140:CDS
AGATGGGTGTGTAGTGAATG+AGG 0.544655 7_1:+52661675 None:intergenic
TGGTAGGGTTCCATCTAAGA+AGG 0.546476 7_1:-52658085 Msa1024140:CDS
GATTCCTCTTAGGAAACTAC+CGG 0.549927 7_1:+52661476 None:intergenic
GAAGATCAATGACGTGGAGA+TGG 0.550046 7_1:-52661355 Msa1024140:CDS
AGGTGACCTAGTGATTTGTC+CGG 0.552254 7_1:-52658451 Msa1024140:CDS
AGGTACGTGAAATATATGAA+AGG 0.567264 7_1:+52661435 None:intergenic
AGCTCCCCAACAAGAACACC+AGG 0.567606 7_1:+52661120 None:intergenic
AATGCAACTGCTGTAACCAC+AGG 0.568227 7_1:+52658603 None:intergenic
AATAAGGCAACAATAGGTGT+TGG 0.572028 7_1:+52658825 None:intergenic
GTGATCTCATAAGTAGGCAC+AGG 0.573493 7_1:+52658264 None:intergenic
GTTATGAGGAGAAAAGGAGA+AGG 0.577169 7_1:+52661720 None:intergenic
ATGGTTAGAAATGTGTTATG+AGG 0.582509 7_1:+52661706 None:intergenic
TGGAAAGCGTTACGTTGTCA+CGG 0.586333 7_1:-52661259 Msa1024140:CDS
CCAAATCGGGAAGGGCAACT+GGG 0.587982 7_1:-52661155 Msa1024140:CDS
TGAGGTGACCAAATCGGGAA+GGG 0.590584 7_1:-52661163 Msa1024140:CDS
AGGACGTGCGTCCTGAGACG+TGG 0.599900 7_1:-52661299 Msa1024140:CDS
GGCTAGTCCAAGGTTGATGG+TGG 0.602655 7_1:-52661238 Msa1024140:CDS
GCCATCTAAGTCAGATGCAA+CGG 0.603277 7_1:+52661554 None:intergenic
GAAGCCGGTAGTTTCCTAAG+AGG 0.606044 7_1:-52661480 Msa1024140:CDS
TAGCCATAAGCATGTAGTAA+GGG 0.612096 7_1:+52661505 None:intergenic
TGCAACCGGAACAATCCTAT+CGG 0.612877 7_1:+52658368 None:intergenic
ATTGATCTTCAGACCTGCGA+AGG 0.614008 7_1:+52661368 None:intergenic
TTCCTTCCGGACAAATCACT+AGG 0.618250 7_1:+52658445 None:intergenic
AATTTCACCAATTAAAGCAG+TGG 0.621079 7_1:-52658529 Msa1024140:CDS
TTGAGGTGACCAAATCGGGA+AGG 0.622614 7_1:-52661164 Msa1024140:CDS
TTGAAGTAGAAAAGGGACAA+TGG 0.623971 7_1:-52658055 Msa1024140:exon
TTTGTTAAGAATTTGTTGGG+AGG 0.632297 7_1:-52661210 Msa1024140:CDS
TTGAGTGTACTAATTTAACA+AGG 0.633129 7_1:-52658140 Msa1024140:CDS
TTATGCCAATTGGTAGCCAT+AGG 0.634303 7_1:+52658796 None:intergenic
GGTCTAACACTTTGTGTCCG+CGG 0.647498 7_1:+52658307 None:intergenic
CGTGAAATATATGAAAGGGA+CGG 0.648172 7_1:+52661440 None:intergenic
AAAGAGCTTACAGTTAGTGG+AGG 0.649872 7_1:-52658222 Msa1024140:CDS
CCATAAGAAAATGTAGAGTG+AGG 0.655476 7_1:+52661646 None:intergenic
ATGCAACTGCTGTAACCACA+GGG 0.660790 7_1:+52658604 None:intergenic
CAGGGTCTAAAATTGTGCGA+TGG 0.669842 7_1:+52658622 None:intergenic
GACCTAGTGATTTGTCCGGA+AGG 0.669947 7_1:-52658447 Msa1024140:CDS
GGTGAATGGGACTGAACTTG+AGG 0.678672 7_1:-52661181 Msa1024140:CDS
AGGTCTGAAGATCAATGACG+TGG 0.721416 7_1:-52661361 Msa1024140:CDS
GTTGCCGAAATTCTACGCTG+AGG 0.727019 7_1:-52661319 Msa1024140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATATAATTTTAAATTT+TGG - chr7_1:52659099-52659118 Msa1024140:intron 0.0%
!! AAAATTATAAATTTAATTAA+GGG - chr7_1:52660389-52660408 Msa1024140:intron 0.0%
!!! AAGTTTTTTTTTTTTTTTGA+AGG + chr7_1:52658707-52658726 None:intergenic 10.0%
!! AGTTATATGTATATATATAA+GGG + chr7_1:52659023-52659042 None:intergenic 10.0%
!! TAGTTATATGTATATATATA+AGG + chr7_1:52659024-52659043 None:intergenic 10.0%
!!! AAATTTAATTTCCAAATTTA+GGG - chr7_1:52659772-52659791 Msa1024140:intron 10.0%
!! AAAATATATTTGTGTCTAAA+TGG + chr7_1:52658858-52658877 None:intergenic 15.0%
!! TATTAATTCCTTAATACTTT+AGG - chr7_1:52659134-52659153 Msa1024140:intron 15.0%
!!! TTCAACTTAATTTCTATTTT+CGG - chr7_1:52659335-52659354 Msa1024140:intron 15.0%
!! TCTAAATTTAAATTGATGTT+TGG - chr7_1:52659438-52659457 Msa1024140:intron 15.0%
!! AAAAAGAATAATACAATAGA+GGG + chr7_1:52659565-52659584 None:intergenic 15.0%
!! AAAAAAGAATAATACAATAG+AGG + chr7_1:52659566-52659585 None:intergenic 15.0%
!! CTAAATTTGGAAATTAAATT+TGG + chr7_1:52659773-52659792 None:intergenic 15.0%
!!! CAAATTTAATTTCCAAATTT+AGG - chr7_1:52659771-52659790 Msa1024140:intron 15.0%
!!! TCTTATAAATTTGTTTTGTA+AGG - chr7_1:52659953-52659972 Msa1024140:intron 15.0%
!! TAAACAATTATCAAAATGAA+TGG - chr7_1:52660115-52660134 Msa1024140:intron 15.0%
!! AAAATTGTAAACATTAAGTT+GGG + chr7_1:52660178-52660197 None:intergenic 15.0%
!! TAAAATTGTAAACATTAAGT+TGG + chr7_1:52660179-52660198 None:intergenic 15.0%
!!! CATATGACTAATTTATTTTT+TGG - chr7_1:52660246-52660265 Msa1024140:intron 15.0%
!! TAACTATATAGAATTCAAAA+AGG + chr7_1:52661618-52661637 None:intergenic 15.0%
!! ATTTGAAAACACATTAAATT+TGG + chr7_1:52661641-52661660 None:intergenic 15.0%
!! ATCACAACAAATGAAATAAA+TGG - chr7_1:52659263-52659282 Msa1024140:intron 20.0%
!! TTAAGAAAAGTTACTAAGAT+AGG + chr7_1:52659389-52659408 None:intergenic 20.0%
!! AAAAGAATAATACAATAGAG+GGG + chr7_1:52659564-52659583 None:intergenic 20.0%
!!! ATAAATAAGAGTATAGAATG+TGG + chr7_1:52659619-52659638 None:intergenic 20.0%
!!! ACATTCTATACTCTTATTTA+TGG - chr7_1:52659618-52659637 Msa1024140:intron 20.0%
!!! CAATTCATATGACTAATTTT+CGG - chr7_1:52660271-52660290 Msa1024140:intron 20.0%
!!! TTCAACTTTAGAAAATATGA+TGG + chr7_1:52660367-52660386 None:intergenic 20.0%
!!! AGGGTTACAATTTTTAATTA+TGG - chr7_1:52660408-52660427 Msa1024140:intron 20.0%
!!! AATTTGAGACTTTAATCTAA+AGG + chr7_1:52660580-52660599 None:intergenic 20.0%
!! TTAAAGTCTCAAATTTACAT+AGG - chr7_1:52660585-52660604 Msa1024140:intron 20.0%
!! AAATATTGTAGTTAATGACT+TGG + chr7_1:52660690-52660709 None:intergenic 20.0%
!! TGGTACAATTATAAACTATT+AGG - chr7_1:52660921-52660940 Msa1024140:intron 20.0%
!! AAGTTGCAAATTATATTCAA+AGG - chr7_1:52661456-52661475 Msa1024140:CDS 20.0%
!! AGTTGCAAATTATATTCAAA+GGG - chr7_1:52661457-52661476 Msa1024140:CDS 20.0%
!!! ACTTTGAAATTGGTTTGAAA+TGG + chr7_1:52658037-52658056 None:intergenic 25.0%
!!! GAATTGTTGTACTTTGAAAT+TGG + chr7_1:52658047-52658066 None:intergenic 25.0%
!! TATGAAGATCAACATTTTGA+TGG + chr7_1:52658252-52658271 None:intergenic 25.0%
!! CCATTTGTTAAGAATTTGTT+GGG - chr7_1:52658428-52658447 Msa1024140:CDS 25.0%
! ATAAATACTAACCTTGCAAA+TGG + chr7_1:52658633-52658652 None:intergenic 25.0%
! GAAAAGTTAGGAACATATAT+AGG + chr7_1:52658674-52658693 None:intergenic 25.0%
!! TAATTTCTATTTTCGGAAGA+AGG - chr7_1:52659342-52659361 Msa1024140:intron 25.0%
! ATAGAAACAAAATATGGAAG+TGG + chr7_1:52659517-52659536 None:intergenic 25.0%
! GAGAGAATAGAAACAAAATA+TGG + chr7_1:52659523-52659542 None:intergenic 25.0%
!!! ATTTTGTTTCTATTCTCTCA+CGG - chr7_1:52659524-52659543 Msa1024140:intron 25.0%
! TAGTGTTTGAAAGTAGTTAA+GGG + chr7_1:52659721-52659740 None:intergenic 25.0%
! TTAGTGTTTGAAAGTAGTTA+AGG + chr7_1:52659722-52659741 None:intergenic 25.0%
! TTAGTTATATAAGTCATGCA+TGG - chr7_1:52659746-52659765 Msa1024140:intron 25.0%
!! TTGGATTTTATGTTCAAAGT+GGG + chr7_1:52659830-52659849 None:intergenic 25.0%
!! ATTGGATTTTATGTTCAAAG+TGG + chr7_1:52659831-52659850 None:intergenic 25.0%
! ATTAGACTCATGTAAAAGAT+AGG - chr7_1:52659981-52660000 Msa1024140:intron 25.0%
! AGTTATATGATGATAAGCTA+TGG + chr7_1:52660026-52660045 None:intergenic 25.0%
!!! CATTGAGCTTTAAATTTGTA+CGG + chr7_1:52660075-52660094 None:intergenic 25.0%
!! TAATTGAGCTAGTTTCTAAT+TGG + chr7_1:52660343-52660362 None:intergenic 25.0%
!!! AAGTCCAATTATTTTTCATG+AGG - chr7_1:52660776-52660795 Msa1024140:intron 25.0%
!!! AGTCCAATTATTTTTCATGA+GGG - chr7_1:52660777-52660796 Msa1024140:intron 25.0%
! AATGATAATAAGGCAACAAT+AGG + chr7_1:52660825-52660844 None:intergenic 25.0%
! CATAATACTTTCCATCTTAA+GGG - chr7_1:52660863-52660882 Msa1024140:intron 25.0%
! AGGAATCAAAGTAATTGTTA+AGG - chr7_1:52660941-52660960 Msa1024140:intron 25.0%
! GGAATCAAAGTAATTGTTAA+GGG - chr7_1:52660942-52660961 Msa1024140:intron 25.0%
! AAAAAGATGCAGCAAATATA+AGG - chr7_1:52661153-52661172 Msa1024140:CDS 25.0%
! ATAAGGAAATTACTTGAAGA+AGG - chr7_1:52661170-52661189 Msa1024140:CDS 25.0%
! GATTCATGAACACAAAATAA+GGG + chr7_1:52661358-52661377 None:intergenic 25.0%
! TTGAGTGTACTAATTTAACA+AGG - chr7_1:52661501-52661520 Msa1024140:CDS 25.0%
! AAAAAGCTTGAAGTAGAAAA+GGG - chr7_1:52661579-52661598 Msa1024140:CDS 25.0%
AAATGTGTTATGAGGAGAAA+AGG + chr7_1:52657930-52657949 None:intergenic 30.0%
ATGGTTAGAAATGTGTTATG+AGG + chr7_1:52657938-52657957 None:intergenic 30.0%
! AGTGAATGAGGTATTTAGAA+TGG + chr7_1:52657957-52657976 None:intergenic 30.0%
! TCTACATTTTCTTATGGTCA+TGG - chr7_1:52658001-52658020 Msa1024140:three_prime_UTR 30.0%
! CTACATTTTCTTATGGTCAT+GGG - chr7_1:52658002-52658021 Msa1024140:three_prime_UTR 30.0%
GGTACGTGAAATATATGAAA+GGG + chr7_1:52658208-52658227 None:intergenic 30.0%
AGGTACGTGAAATATATGAA+AGG + chr7_1:52658209-52658228 None:intergenic 30.0%
! TGGAATGTGTTCAATTCTTT+TGG - chr7_1:52658362-52658381 Msa1024140:CDS 30.0%
! GCCATTTGTTAAGAATTTGT+TGG - chr7_1:52658427-52658446 Msa1024140:CDS 30.0%
CCCAACAAATTCTTAACAAA+TGG + chr7_1:52658431-52658450 None:intergenic 30.0%
!! TTTGTTAAGAATTTGTTGGG+AGG - chr7_1:52658431-52658450 Msa1024140:CDS 30.0%
! GGAGTATTTGAAGAAAAGTT+AGG + chr7_1:52658686-52658705 None:intergenic 30.0%
! TTTGTCCAAGATTTTCTTTG+AGG - chr7_1:52658799-52658818 Msa1024140:CDS 30.0%
! TTGTCCAAGATTTTCTTTGA+GGG - chr7_1:52658800-52658819 Msa1024140:CDS 30.0%
! TGTGATGTCCTAAAGTATTA+AGG + chr7_1:52659145-52659164 None:intergenic 30.0%
TGTTGTGATCTTAAAAACCA+TGG + chr7_1:52659252-52659271 None:intergenic 30.0%
AGAAAAGTTACTAAGATAGG+TGG + chr7_1:52659386-52659405 None:intergenic 30.0%
AAAATATGGAAGTGGAAGAA+AGG + chr7_1:52659509-52659528 None:intergenic 30.0%
! ATAAGAGTATAGAATGTGGA+TGG + chr7_1:52659615-52659634 None:intergenic 30.0%
AATACAGAGTGGCATATAAA+AGG + chr7_1:52659661-52659680 None:intergenic 30.0%
TTATGACTTATAAGAGAGAG+AGG + chr7_1:52659698-52659717 None:intergenic 30.0%
GATCTATAAAGCCCTAAATT+TGG + chr7_1:52659786-52659805 None:intergenic 30.0%
ATATGATGATAAGCTATGGT+GGG + chr7_1:52660022-52660041 None:intergenic 30.0%
TATATGATGATAAGCTATGG+TGG + chr7_1:52660023-52660042 None:intergenic 30.0%
! TTTTATATAGTTGTGCATGC+TGG - chr7_1:52660194-52660213 Msa1024140:intron 30.0%
AATTATTATCGTTGTCTACG+TGG + chr7_1:52660481-52660500 None:intergenic 30.0%
ATTTACATAGGTGAGAATAG+AGG - chr7_1:52660597-52660616 Msa1024140:intron 30.0%
AGTGGATCACATTTAATTCT+TGG + chr7_1:52660738-52660757 None:intergenic 30.0%
CTACCCTCATGAAAAATAAT+TGG + chr7_1:52660783-52660802 None:intergenic 30.0%
! TTGCCTTATTATCATTCCTA+TGG - chr7_1:52660829-52660848 Msa1024140:intron 30.0%
TAGCCATAGGAATGATAATA+AGG + chr7_1:52660835-52660854 None:intergenic 30.0%
!! ATGGAAAGTATTATGCCAAT+TGG + chr7_1:52660858-52660877 None:intergenic 30.0%
GCATAATACTTTCCATCTTA+AGG - chr7_1:52660862-52660881 Msa1024140:intron 30.0%
!!! CAAGCAATTTTTTCTGGTAA+GGG + chr7_1:52660903-52660922 None:intergenic 30.0%
!!! TTGTACCAAGCAATTTTTTC+TGG + chr7_1:52660909-52660928 None:intergenic 30.0%
AATTTCACCAATTAAAGCAG+TGG - chr7_1:52661112-52661131 Msa1024140:CDS 30.0%
! ACGAAACAAAGTGTGTTTTA+TGG - chr7_1:52661302-52661321 Msa1024140:CDS 30.0%
! AAGTGTGTTTTATGGTACAA+CGG - chr7_1:52661310-52661329 Msa1024140:CDS 30.0%
GGATTCATGAACACAAAATA+AGG + chr7_1:52661359-52661378 None:intergenic 30.0%
AAGAATGTGATCTCATAAGT+AGG + chr7_1:52661386-52661405 None:intergenic 30.0%
GAAAAAGCTTGAAGTAGAAA+AGG - chr7_1:52661578-52661597 Msa1024140:CDS 30.0%
!! AGGGGTTTTTAAAAGGAGTT+GGG + chr7_1:52657901-52657920 None:intergenic 35.0%
CCATAAGAAAATGTAGAGTG+AGG + chr7_1:52657998-52658017 None:intergenic 35.0%
! CCTCACTCTACATTTTCTTA+TGG - chr7_1:52657995-52658014 Msa1024140:three_prime_UTR 35.0%
ATTCCCTTACTACATGCTTA+TGG - chr7_1:52658133-52658152 Msa1024140:CDS 35.0%
TAGCCATAAGCATGTAGTAA+GGG + chr7_1:52658139-52658158 None:intergenic 35.0%
CGTGAAATATATGAAAGGGA+CGG + chr7_1:52658204-52658223 None:intergenic 35.0%
! TCAGTCTAATTTGCCTGATT+TGG - chr7_1:52658571-52658590 Msa1024140:CDS 35.0%
! CAGTCTAATTTGCCTGATTT+GGG - chr7_1:52658572-52658591 Msa1024140:CDS 35.0%
TGACTTTATGTCCATTTGCA+AGG - chr7_1:52658619-52658638 Msa1024140:CDS 35.0%
AACACCCTCAAAGAAAATCT+TGG + chr7_1:52658807-52658826 None:intergenic 35.0%
ATCTTAACGTTGTACAGTTG+TGG - chr7_1:52659225-52659244 Msa1024140:intron 35.0%
!! TAGGTGGATTGAGTCATAAT+TGG + chr7_1:52659370-52659389 None:intergenic 35.0%
TGACTATGACATGTTGCTAT+TGG - chr7_1:52659473-52659492 Msa1024140:intron 35.0%
AATATTTACCACCATGCATG+TGG - chr7_1:52659588-52659607 Msa1024140:intron 35.0%
TACTCAACTGAAATACAGAG+TGG + chr7_1:52659672-52659691 None:intergenic 35.0%
TAACATGGCAGCAAAATACA+AGG + chr7_1:52659854-52659873 None:intergenic 35.0%
CTGCCATGTTAAAGATACAA+CGG - chr7_1:52659863-52659882 Msa1024140:intron 35.0%
ACACCGTTGTATCTTTAACA+TGG + chr7_1:52659869-52659888 None:intergenic 35.0%
TCACGTTGAATGAGATTTAG+TGG - chr7_1:52659918-52659937 Msa1024140:intron 35.0%
CACGTTGAATGAGATTTAGT+GGG - chr7_1:52659919-52659938 Msa1024140:intron 35.0%
ACGTTGAATGAGATTTAGTG+GGG - chr7_1:52659920-52659939 Msa1024140:intron 35.0%
ATCTTCCTATACTCAACCAA+GGG - chr7_1:52660143-52660162 Msa1024140:intron 35.0%
!! GTAAACATTAAGTTGGGACA+TGG + chr7_1:52660172-52660191 None:intergenic 35.0%
! ACTACAATATTTTCCTCTGC+AGG - chr7_1:52660698-52660717 Msa1024140:intron 35.0%
! AATATTTTCCTCTGCAGGAA+GGG - chr7_1:52660703-52660722 Msa1024140:intron 35.0%
!! AGAAGTTTAGTTCTTGGTAG+TGG + chr7_1:52660756-52660775 None:intergenic 35.0%
!! GGACTTAGAAGTTTAGTTCT+TGG + chr7_1:52660762-52660781 None:intergenic 35.0%
AATAAGGCAACAATAGGTGT+TGG + chr7_1:52660819-52660838 None:intergenic 35.0%
GTTTAGGTATACCCTTAAGA+TGG + chr7_1:52660877-52660896 None:intergenic 35.0%
! TTTCTGGTAAGGGAATGTTT+AGG + chr7_1:52660893-52660912 None:intergenic 35.0%
!!! CCAAGCAATTTTTTCTGGTA+AGG + chr7_1:52660904-52660923 None:intergenic 35.0%
CCTTACCAGAAAAAATTGCT+TGG - chr7_1:52660901-52660920 Msa1024140:intron 35.0%
! ACACCTTTTTGACCTTTTCT+TGG + chr7_1:52660984-52661003 None:intergenic 35.0%
! TTTTCGCTGAATTAACCGAT+AGG - chr7_1:52661258-52661277 Msa1024140:CDS 35.0%
ATTAACCGATAGGATTGTTC+CGG - chr7_1:52661268-52661287 Msa1024140:CDS 35.0%
TGTTTCGTGTTAATTGCAAC+CGG + chr7_1:52661290-52661309 None:intergenic 35.0%
TATATTCAAAGGGTTCTTGC+TGG - chr7_1:52661467-52661486 Msa1024140:CDS 35.0%
!! CAAGCTTTTTCCTTCTTAGA+TGG + chr7_1:52661569-52661588 None:intergenic 35.0%
TTGAAGTAGAAAAGGGACAA+TGG - chr7_1:52661586-52661605 Msa1024140:CDS 35.0%
! TTGTGATGATGCTCATGAAA+TGG - chr7_1:52661693-52661712 Msa1024140:five_prime_UTR 35.0%
!! GGTTTTTAAAAGGAGTTGGG+GGG + chr7_1:52657898-52657917 None:intergenic 40.0%
!! GGGTTTTTAAAAGGAGTTGG+GGG + chr7_1:52657899-52657918 None:intergenic 40.0%
!! GGGGTTTTTAAAAGGAGTTG+GGG + chr7_1:52657900-52657919 None:intergenic 40.0%
!! GAGGGGTTTTTAAAAGGAGT+TGG + chr7_1:52657902-52657921 None:intergenic 40.0%
! GAGAAGGAGGGGTTTTTAAA+AGG + chr7_1:52657908-52657927 None:intergenic 40.0%
GTTATGAGGAGAAAAGGAGA+AGG + chr7_1:52657924-52657943 None:intergenic 40.0%
TAGAGTGAGGTTGAGAAGAT+GGG + chr7_1:52657985-52658004 None:intergenic 40.0%
GTAGCCATAAGCATGTAGTA+AGG + chr7_1:52658140-52658159 None:intergenic 40.0%
GATTCCTCTTAGGAAACTAC+CGG + chr7_1:52658168-52658187 None:intergenic 40.0%
GTAAGAGGATGATTCCTCTT+AGG + chr7_1:52658178-52658197 None:intergenic 40.0%
!! CGATGGTTTCTGAGACAAAA+AGG + chr7_1:52658229-52658248 None:intergenic 40.0%
!!! GATCAACATTTTGATGGCGA+TGG + chr7_1:52658246-52658265 None:intergenic 40.0%
TTGATCTTCATAACCTTCGC+AGG - chr7_1:52658260-52658279 Msa1024140:CDS 40.0%
!! GAATTTGTTGGGAGGTGATA+AGG - chr7_1:52658439-52658458 Msa1024140:CDS 40.0%
TGAACTTGAGGTGACCAAAT+CGG - chr7_1:52658472-52658491 Msa1024140:CDS 40.0%
!! TAATTTGCCTGATTTGGGAC+TGG - chr7_1:52658577-52658596 Msa1024140:CDS 40.0%
!! AATTTGCCTGATTTGGGACT+GGG - chr7_1:52658578-52658597 Msa1024140:CDS 40.0%
AGTGGAAGAAAGGCTCATTA+TGG + chr7_1:52659499-52659518 None:intergenic 40.0%
TGGCAGCAAAATACAAGGAT+TGG + chr7_1:52659849-52659868 None:intergenic 40.0%
GATCTTCCTATACTCAACCA+AGG - chr7_1:52660142-52660161 Msa1024140:intron 40.0%
! CAATATTTTCCTCTGCAGGA+AGG - chr7_1:52660702-52660721 Msa1024140:intron 40.0%
TCATTCCTATGGCTACCAAT+TGG - chr7_1:52660840-52660859 Msa1024140:intron 40.0%
! TTATGCCAATTGGTAGCCAT+AGG + chr7_1:52660848-52660867 None:intergenic 40.0%
!! TTTTGACCTTTTCTTGGTGC+TGG + chr7_1:52660978-52660997 None:intergenic 40.0%
GCACCAAGAAAAGGTCAAAA+AGG - chr7_1:52660978-52660997 Msa1024140:intron 40.0%
!! GAAAGTGCCACTGCTTTAAT+TGG + chr7_1:52661122-52661141 None:intergenic 40.0%
AGTGGCACTTTCAAGAGAAA+GGG - chr7_1:52661130-52661149 Msa1024140:CDS 40.0%
GTAGGGAACCATTTCTTCTA+CGG - chr7_1:52661225-52661244 Msa1024140:CDS 40.0%
CCACTAACTGTAAGCTCTTT+AGG + chr7_1:52661419-52661438 None:intergenic 40.0%
CCTAAAGAGCTTACAGTTAG+TGG - chr7_1:52661416-52661435 Msa1024140:CDS 40.0%
AAAGAGCTTACAGTTAGTGG+AGG - chr7_1:52661419-52661438 Msa1024140:CDS 40.0%
GATAAGTATGCTATGCTTGC+TGG - chr7_1:52661527-52661546 Msa1024140:CDS 40.0%
TGAGGAGAAAAGGAGAAGGA+GGG + chr7_1:52657920-52657939 None:intergenic 45.0%
ATGAGGAGAAAAGGAGAAGG+AGG + chr7_1:52657921-52657940 None:intergenic 45.0%
AGATGGGTGTGTAGTGAATG+AGG + chr7_1:52657969-52657988 None:intergenic 45.0%
GTAGAGTGAGGTTGAGAAGA+TGG + chr7_1:52657986-52658005 None:intergenic 45.0%
CTAAGTCAGATGCAACGGTT+TGG + chr7_1:52658085-52658104 None:intergenic 45.0%
ACCGTTGCATCTGACTTAGA+TGG - chr7_1:52658086-52658105 Msa1024140:CDS 45.0%
GCCATCTAAGTCAGATGCAA+CGG + chr7_1:52658090-52658109 None:intergenic 45.0%
!! TCTTAGGAAACTACCGGCTT+CGG + chr7_1:52658162-52658181 None:intergenic 45.0%
ATTGATCTTCAGACCTGCGA+AGG + chr7_1:52658276-52658295 None:intergenic 45.0%
AGGTCTGAAGATCAATGACG+TGG - chr7_1:52658280-52658299 Msa1024140:CDS 45.0%
GAAGATCAATGACGTGGAGA+TGG - chr7_1:52658286-52658305 Msa1024140:CDS 45.0%
ATGACGTGGAGATGGTTTCA+AGG - chr7_1:52658294-52658313 Msa1024140:CDS 45.0%
ACGTCCTCAGCGTAGAATTT+CGG + chr7_1:52658329-52658348 None:intergenic 45.0%
TTGAACACATTCCACGTCTC+AGG + chr7_1:52658356-52658375 None:intergenic 45.0%
!! TGGAAAGCGTTACGTTGTCA+CGG - chr7_1:52658382-52658401 Msa1024140:CDS 45.0%
TTGGGAGGTGATAAGGTGAA+TGG - chr7_1:52658446-52658465 Msa1024140:CDS 45.0%
TGGGAGGTGATAAGGTGAAT+GGG - chr7_1:52658447-52658466 Msa1024140:CDS 45.0%
GAACTTGAGGTGACCAAATC+GGG - chr7_1:52658473-52658492 Msa1024140:CDS 45.0%
!! AAGGGCAACTGGGTTTGTTA+AGG - chr7_1:52658496-52658515 Msa1024140:CDS 45.0%
GGATTCCCTTGGTTGAGTAT+AGG + chr7_1:52660151-52660170 None:intergenic 45.0%
TATCGTTGTCTACGTGGTGT+CGG + chr7_1:52660475-52660494 None:intergenic 45.0%
! CAGGGTCTAAAATTGTGCGA+TGG + chr7_1:52661022-52661041 None:intergenic 45.0%
! TCGCACAATTTTAGACCCTG+TGG - chr7_1:52661022-52661041 Msa1024140:intron 45.0%
ATGCAACTGCTGTAACCACA+GGG + chr7_1:52661040-52661059 None:intergenic 45.0%
AATGCAACTGCTGTAACCAC+AGG + chr7_1:52661041-52661060 None:intergenic 45.0%
GTGGTTACAGCAGTTGCATT+AGG - chr7_1:52661041-52661060 Msa1024140:CDS 45.0%
CAGTGGCACTTTCAAGAGAA+AGG - chr7_1:52661129-52661148 Msa1024140:CDS 45.0%
! AGGTGACCTAGTGATTTGTC+CGG - chr7_1:52661190-52661209 Msa1024140:CDS 45.0%
TTCCTTCCGGACAAATCACT+AGG + chr7_1:52661199-52661218 None:intergenic 45.0%
TCCGGAAGGAACAACTTGTA+GGG - chr7_1:52661208-52661227 Msa1024140:CDS 45.0%
TCCCTACAAGTTGTTCCTTC+CGG + chr7_1:52661212-52661231 None:intergenic 45.0%
TGCAACCGGAACAATCCTAT+CGG + chr7_1:52661276-52661295 None:intergenic 45.0%
! TTTTATGGTACAACGGTCCG+CGG - chr7_1:52661317-52661336 Msa1024140:CDS 45.0%
GTGATCTCATAAGTAGGCAC+AGG + chr7_1:52661380-52661399 None:intergenic 45.0%
TGGTAGGGTTCCATCTAAGA+AGG - chr7_1:52661556-52661575 Msa1024140:CDS 45.0%
!! GAAAATTATAAATTTAATTA+AGG - chr7_1:52660388-52660407 Msa1024140:intron 5.0%
GAGGAGAAAAGGAGAAGGAG+GGG + chr7_1:52657919-52657938 None:intergenic 50.0%
ATGCTTATGGCTACCGAAGC+CGG - chr7_1:52658146-52658165 Msa1024140:CDS 50.0%
GAAGCCGGTAGTTTCCTAAG+AGG - chr7_1:52658161-52658180 Msa1024140:CDS 50.0%
TGAAAGGGACGGAGAGTAAG+AGG + chr7_1:52658193-52658212 None:intergenic 50.0%
GTTGCCGAAATTCTACGCTG+AGG - chr7_1:52658322-52658341 Msa1024140:CDS 50.0%
AATGGCTCCACCATCAACCT+TGG + chr7_1:52658413-52658432 None:intergenic 50.0%
GGTGAATGGGACTGAACTTG+AGG - chr7_1:52658460-52658479 Msa1024140:CDS 50.0%
TTGAGGTGACCAAATCGGGA+AGG - chr7_1:52658477-52658496 Msa1024140:CDS 50.0%
TGAGGTGACCAAATCGGGAA+GGG - chr7_1:52658478-52658497 Msa1024140:CDS 50.0%
!! ACTGGGTTTGTTAAGGAGCC+TGG - chr7_1:52658503-52658522 Msa1024140:CDS 50.0%
AAGGAGCCTGGTGTTCTTGT+TGG - chr7_1:52658515-52658534 Msa1024140:CDS 50.0%
AGGAGCCTGGTGTTCTTGTT+GGG - chr7_1:52658516-52658535 Msa1024140:CDS 50.0%
CTATCTCCCAGTCCCAAATC+AGG + chr7_1:52658587-52658606 None:intergenic 50.0%
CGTTGTACAGTTGTGGACCA+TGG - chr7_1:52659232-52659251 Msa1024140:intron 50.0%
ATGTGGATGGACCACATGCA+TGG + chr7_1:52659602-52659621 None:intergenic 50.0%
AGTTGGGACATGGATTCCCT+TGG + chr7_1:52660162-52660181 None:intergenic 50.0%
! TCCTCTGCAGGAAGGGTATA+TGG - chr7_1:52660710-52660729 Msa1024140:intron 50.0%
ACCATATACCCTTCCTGCAG+AGG + chr7_1:52660714-52660733 None:intergenic 50.0%
!!! TTTTCTTGGTGCTGGTGGAG+GGG + chr7_1:52660970-52660989 None:intergenic 50.0%
!!! CTTTTCTTGGTGCTGGTGGA+GGG + chr7_1:52660971-52660990 None:intergenic 50.0%
!!! TGACCTTTTCTTGGTGCTGG+TGG + chr7_1:52660975-52660994 None:intergenic 50.0%
! GACCTAGTGATTTGTCCGGA+AGG - chr7_1:52661194-52661213 Msa1024140:CDS 50.0%
GTCCGGAAGGAACAACTTGT+AGG - chr7_1:52661207-52661226 Msa1024140:CDS 50.0%
GCGCTGAACCGTAGAAGAAA+TGG + chr7_1:52661236-52661255 None:intergenic 50.0%
GGTCTAACACTTTGTGTCCG+CGG + chr7_1:52661337-52661356 None:intergenic 50.0%
AGGGTTCTTGCTGGAACACT+TGG - chr7_1:52661476-52661495 Msa1024140:CDS 50.0%
! GCTATGCTTGCTGGTACAGA+TGG - chr7_1:52661536-52661555 Msa1024140:CDS 50.0%
! TGCTTGCTGGTACAGATGGT+AGG - chr7_1:52661540-52661559 Msa1024140:CDS 50.0%
! GCTTGCTGGTACAGATGGTA+GGG - chr7_1:52661541-52661560 Msa1024140:CDS 50.0%
! ACGTTGTCACGGCTAGTCCA+AGG - chr7_1:52658393-52658412 Msa1024140:CDS 55.0%
! CACGGCTAGTCCAAGGTTGA+TGG - chr7_1:52658400-52658419 Msa1024140:CDS 55.0%
!! GGCTAGTCCAAGGTTGATGG+TGG - chr7_1:52658403-52658422 Msa1024140:CDS 55.0%
ACCAAATCGGGAAGGGCAAC+TGG - chr7_1:52658485-52658504 Msa1024140:CDS 55.0%
CCAAATCGGGAAGGGCAACT+GGG - chr7_1:52658486-52658505 Msa1024140:CDS 55.0%
GGAGCCTGGTGTTCTTGTTG+GGG - chr7_1:52658517-52658536 Msa1024140:CDS 55.0%
AGCTCCCCAACAAGAACACC+AGG + chr7_1:52658524-52658543 None:intergenic 55.0%
TGGATGGACCACATGCATGG+TGG + chr7_1:52659599-52659618 None:intergenic 55.0%
!!! CCTTTTCTTGGTGCTGGTGG+AGG + chr7_1:52660972-52660991 None:intergenic 55.0%
CCTCCACCAGCACCAAGAAA+AGG - chr7_1:52660969-52660988 Msa1024140:intron 55.0%
CCCAGTTGCCCTTCCCGATT+TGG + chr7_1:52658489-52658508 None:intergenic 60.0%
AGGACGTGCGTCCTGAGACG+TGG - chr7_1:52658342-52658361 Msa1024140:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 52657886 52661777 52657886 ID=Msa1024140;Name=Msa1024140
chr7_1 mRNA 52657886 52661777 52657886 ID=Msa1024140-mRNA-1;Parent=Msa1024140;Name=Msa1024140-mRNA-1;_AED=0.03;_eAED=0.03;_QI=128|1|1|1|1|1|2|188|498
chr7_1 exon 52657886 52658943 52657886 ID=Msa1024140-mRNA-1:exon:10465;Parent=Msa1024140-mRNA-1
chr7_1 exon 52661023 52661777 52661023 ID=Msa1024140-mRNA-1:exon:10464;Parent=Msa1024140-mRNA-1
chr7_1 five_prime_UTR 52661650 52661777 52661650 ID=Msa1024140-mRNA-1:five_prime_utr;Parent=Msa1024140-mRNA-1
chr7_1 CDS 52661023 52661649 52661023 ID=Msa1024140-mRNA-1:cds;Parent=Msa1024140-mRNA-1
chr7_1 CDS 52658074 52658943 52658074 ID=Msa1024140-mRNA-1:cds;Parent=Msa1024140-mRNA-1
chr7_1 three_prime_UTR 52657886 52658073 52657886 ID=Msa1024140-mRNA-1:three_prime_utr;Parent=Msa1024140-mRNA-1
Gene Sequence

>Msa1024140

ATGGTCATGGGAGCATTTCACCATTTCAAACCAATTTCAAAGTACAACAATTCACAAGATAAATCAAACCAAACCGTTGCATCTGACTTAGATGGCACACTTCTTGTATCTAGAGATGCATTCCCTTACTACATGCTTATGGCTACCGAAGCCGGTAGTTTCCTAAGAGGAATCATCCTCTTACTCTCCGTCCCTTTCATATATTTCACGTACCTTTTTGTCTCAGAAACCATCGCCATCAAAATGTTGATCTTCATAACCTTCGCAGGTCTGAAGATCAATGACGTGGAGATGGTTTCAAGGTCAGTGTTGCCGAAATTCTACGCTGAGGACGTGCGTCCTGAGACGTGGAATGTGTTCAATTCTTTTGGAAAGCGTTACGTTGTCACGGCTAGTCCAAGGTTGATGGTGGAGCCATTTGTTAAGAATTTGTTGGGAGGTGATAAGGTGAATGGGACTGAACTTGAGGTGACCAAATCGGGAAGGGCAACTGGGTTTGTTAAGGAGCCTGGTGTTCTTGTTGGGGAGCTCAAGAAAGATGCTGTTGTCAAAGAGTTTCAGTCTAATTTGCCTGATTTGGGACTGGGAGATAGTGAAAGTGATCATGACTTTATGTCCATTTGCAAGGAAGGGTATATGGTTCCAAGAATTAAATGTGATCCACTACCAAGAACTAAACTTCTAAGTCCAATTATTTTTCATGAGGGTAGATTTGTTCAACGACCAACACCTATTGTTGCCTTATTATCATTCCTATGGCTACCAATTGGCATAATACTTTCCATCTTAAGGGTATACCTAAACATTCCCTTACCAGAAAAAATTGCTTGGTACAATTATAAACTATTAGGAATCAAAGTAATTGTTAAGGGTACCCCTCCACCAGCACCAAGAAAAGGTCAAAAAGGTGTATTATTTGTGTGTAACCATCGCACAATTTTAGACCCTGTGGTTACAGCAGTTGCATTAGGAAGAAAAATTAGTTGTGTCACATATAGTATTAGTAAATTTAGTGAAATAATTTCACCAATTAAAGCAGTGGCACTTTCAAGAGAAAGGGAAAAAGATGCAGCAAATATAAGGAAATTACTTGAAGAAGGTGACCTAGTGATTTGTCCGGAAGGAACAACTTGTAGGGAACCATTTCTTCTACGGTTCAGCGCGCTTTTCGCTGAATTAACCGATAGGATTGTTCCGGTTGCAATTAACACGAAACAAAGTGTGTTTTATGGTACAACGGTCCGCGGACACAAAGTGTTAGACCCTTATTTTGTGTTCATGAATCCTGTGCCTACTTATGAGATCACATTCTTGAATCAACTTCCTAAAGAGCTTACAGTTAGTGGAGGAAAATCTGCTATTGAAGTTGCAAATTATATTCAAAGGGTTCTTGCTGGAACACTTGGATTTGAGTGTACTAATTTAACAAGGAAAGATAAGTATGCTATGCTTGCTGGTACAGATGGTAGGGTTCCATCTAAGAAGGAAAAAGCTTGA

Protein sequence

>Msa1024140

MVMGAFHHFKPISKYNNSQDKSNQTVASDLDGTLLVSRDAFPYYMLMATEAGSFLRGIILLLSVPFIYFTYLFVSETIAIKMLIFITFAGLKINDVEMVSRSVLPKFYAEDVRPETWNVFNSFGKRYVVTASPRLMVEPFVKNLLGGDKVNGTELEVTKSGRATGFVKEPGVLVGELKKDAVVKEFQSNLPDLGLGDSESDHDFMSICKEGYMVPRIKCDPLPRTKLLSPIIFHEGRFVQRPTPIVALLSFLWLPIGIILSILRVYLNIPLPEKIAWYNYKLLGIKVIVKGTPPPAPRKGQKGVLFVCNHRTILDPVVTAVALGRKISCVTYSISKFSEIISPIKAVALSREREKDAANIRKLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFYGTTVRGHKVLDPYFVFMNPVPTYEITFLNQLPKELTVSGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYAMLAGTDGRVPSKKEKA*