Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141180 | XP_013461380.1 | 99.648 | 568 | 2 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1165 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141180 | sp|O49048|VPS45_ARATH | 84.359 | 569 | 88 | 1 | 1 | 568 | 1 | 569 | 0.0 | 997 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141180 | A0A072VB81 | 99.648 | 568 | 2 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1165 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0141180 | Msa0375710 | 0.816690 | 4.856382e-52 | -8.615850e-47 |
| Msa0141180 | Msa0424410 | 0.979942 | 4.344992e-149 | -8.615850e-47 |
| Msa0141180 | Msa0741440 | 0.801128 | 1.042065e-48 | -8.615850e-47 |
| Msa0141180 | Msa0786750 | 0.813439 | 2.558068e-51 | -8.615850e-47 |
| Msa0141180 | Msa0822500 | 0.814055 | 1.871912e-51 | -8.615850e-47 |
| Msa0141180 | Msa1207310 | 0.801005 | 1.104405e-48 | -8.615850e-47 |
| Msa0141180 | Msa1415460 | 0.975728 | 1.732961e-140 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141180 | MtrunA17_Chr3g0126071 | 99.472 | 568 | 2 | 1 | 1 | 568 | 1 | 567 | 0.0 | 1158 |
| Msa0141180 | MtrunA17_Chr4g0056851 | 23.404 | 517 | 346 | 17 | 19 | 499 | 146 | 648 | 4.65e-25 | 110 |
| Msa0141180 | MtrunA17_Chr4g0051171 | 23.614 | 559 | 351 | 21 | 22 | 525 | 39 | 576 | 8.96e-24 | 105 |
| Msa0141180 | MtrunA17_Chr5g0398701 | 23.776 | 429 | 281 | 13 | 19 | 414 | 43 | 458 | 1.69e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141180 | AT1G77140.1 | 84.359 | 569 | 88 | 1 | 1 | 568 | 1 | 569 | 0.0 | 997 |
| Msa0141180 | AT1G02010.3 | 24.405 | 504 | 343 | 16 | 17 | 494 | 41 | 532 | 1.49e-32 | 132 |
| Msa0141180 | AT1G02010.2 | 24.206 | 504 | 344 | 16 | 17 | 494 | 41 | 532 | 1.94e-32 | 132 |
| Msa0141180 | AT1G02010.5 | 24.405 | 504 | 343 | 16 | 17 | 494 | 9 | 500 | 2.12e-32 | 132 |
| Msa0141180 | AT1G02010.1 | 24.206 | 504 | 344 | 16 | 17 | 494 | 41 | 532 | 2.74e-32 | 132 |
| Msa0141180 | AT1G02010.4 | 23.738 | 535 | 338 | 19 | 17 | 494 | 41 | 562 | 1.65e-31 | 130 |
| Msa0141180 | AT4G12120.1 | 23.397 | 624 | 370 | 20 | 22 | 556 | 44 | 648 | 2.68e-30 | 126 |
| Msa0141180 | AT1G12360.1 | 24.277 | 519 | 338 | 16 | 19 | 499 | 41 | 542 | 8.57e-30 | 124 |
| Msa0141180 | AT2G17980.1 | 24.833 | 600 | 355 | 23 | 22 | 554 | 35 | 605 | 5.63e-25 | 109 |
| Msa0141180 | AT1G02010.6 | 24.784 | 347 | 230 | 12 | 170 | 494 | 46 | 383 | 2.10e-22 | 101 |
Find 153 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTCTTCACCGAATAAATT+TGG | 0.154667 | 1_3:+75941720 | Msa0141180:three_prime_UTR |
| CCAAGTCTTCCATCATCTTT+TGG | 0.221604 | 1_3:+75941439 | Msa0141180:three_prime_UTR |
| AAGAGAACTGGTGATCTTTA+TGG | 0.249179 | 1_3:+75939543 | Msa0141180:CDS |
| TGACAATGCTTTCCATGATT+TGG | 0.250559 | 1_3:-75940002 | None:intergenic |
| TGATTTAGCAATGGGGTTAC+AGG | 0.252751 | 1_3:-75937430 | None:intergenic |
| ATTTACCCCAGGTTTGTATT+TGG | 0.273417 | 1_3:-75939189 | None:intergenic |
| ATACATGTTAGCTTTGAAAA+AGG | 0.276081 | 1_3:-75937790 | None:intergenic |
| CACCAACCATTGATCAATTT+AGG | 0.276401 | 1_3:+75941287 | Msa0141180:three_prime_UTR |
| AAACCGAACGCCTGTATTAC+TGG | 0.282191 | 1_3:-75940356 | None:intergenic |
| AGGGTAGTTGTCAACAAATT+TGG | 0.318368 | 1_3:-75938050 | None:intergenic |
| GTTCTTTGATATCTAATAAC+TGG | 0.324443 | 1_3:-75936985 | None:intergenic |
| TATGAGAATTTCGGAGATAT+TGG | 0.329104 | 1_3:+75937810 | Msa0141180:CDS |
| GCTAACATGTATGAGAATTT+CGG | 0.350102 | 1_3:+75937801 | Msa0141180:CDS |
| AAAAGCTGCATTAATTGAAC+AGG | 0.355320 | 1_3:-75939143 | None:intergenic |
| AAATAACACCCAAATTTATT+CGG | 0.360837 | 1_3:-75941729 | None:intergenic |
| CCAGCTGACGACGCATATAC+TGG | 0.362544 | 1_3:-75935909 | None:intergenic |
| CAGCCTGCTTCAAAAGAAAC+TGG | 0.370290 | 1_3:-75939512 | None:intergenic |
| TATCCAACCTCCTGATCCTT+TGG | 0.374257 | 1_3:-75937647 | None:intergenic |
| TGAAAGTGATTCCCAACAAA+TGG | 0.376536 | 1_3:-75940051 | None:intergenic |
| AGGTTTGTATTTGGCAGATC+TGG | 0.379649 | 1_3:-75939180 | None:intergenic |
| GACGTAATTATCTTCATTGT+TGG | 0.380475 | 1_3:+75940289 | Msa0141180:CDS |
| CAATGAAAGCATATCAGATA+TGG | 0.385298 | 1_3:+75939070 | Msa0141180:CDS |
| TATTCACTTACTTGCCGATT+CGG | 0.392826 | 1_3:+75936144 | Msa0141180:CDS |
| TGTCTTCACCGAATAAATTT+GGG | 0.394617 | 1_3:+75941721 | Msa0141180:three_prime_UTR |
| GCTAAATCAATGGACCTATC+AGG | 0.396844 | 1_3:+75937444 | Msa0141180:CDS |
| AGGTCCATTGATTTAGCAAT+GGG | 0.398442 | 1_3:-75937438 | None:intergenic |
| GATGTAGACTACCCATTTGT+TGG | 0.398592 | 1_3:+75940039 | Msa0141180:CDS |
| AAAAGTACAAACCTACTGTT+TGG | 0.401418 | 1_3:-75937893 | None:intergenic |
| TGACGTCCACTTTGTTGTCT+TGG | 0.402333 | 1_3:-75937607 | None:intergenic |
| CATTGCAGCGTTTCAGTGAT+CGG | 0.405105 | 1_3:+75936917 | Msa0141180:CDS |
| TGATCAATTTAGGTGCTAAT+CGG | 0.410119 | 1_3:+75941297 | Msa0141180:three_prime_UTR |
| CGCATCTTACAAGACATATC+TGG | 0.410624 | 1_3:+75934611 | Msa0141180:CDS |
| GGAACAGAAGCGGCTGGTGC+TGG | 0.415969 | 1_3:-75939981 | None:intergenic |
| CTTTGTTGTTGGTGATTGAC+AGG | 0.418863 | 1_3:+75937398 | Msa0141180:CDS |
| GGAAGTTGTCCAGCAAGTTC+AGG | 0.420425 | 1_3:+75936174 | Msa0141180:CDS |
| TTCAGTGATCGGGTTGTTGA+AGG | 0.423672 | 1_3:+75936928 | Msa0141180:CDS |
| CTGTTGTTTGAAGTATATCC+TGG | 0.425517 | 1_3:+75941100 | Msa0141180:exon |
| GCCGCTTCTGTTCCAAATCA+TGG | 0.426968 | 1_3:+75939990 | Msa0141180:CDS |
| CGTTCGTCGTCCTCGGTCGC+TGG | 0.429357 | 1_3:+75934445 | Msa0141180:five_prime_UTR |
| TGGTAAATTTCCAAAGGATC+AGG | 0.431077 | 1_3:+75937637 | Msa0141180:CDS |
| GCATGGCATTATGTGCTGCC+TGG | 0.431512 | 1_3:+75941650 | Msa0141180:three_prime_UTR |
| TCGTCCTCGGTCGCTGGTGG+TGG | 0.436828 | 1_3:+75934451 | Msa0141180:five_prime_UTR |
| AGGTGATATTCTCCGAATCT+AGG | 0.437587 | 1_3:-75935937 | None:intergenic |
| CTACAAAATGCCAGTAATAC+AGG | 0.437679 | 1_3:+75940346 | Msa0141180:CDS |
| CTTCTGTTCTTAATTCGAAA+AGG | 0.438619 | 1_3:+75940392 | Msa0141180:CDS |
| GAGCAGTTACCTGAACTTGC+TGG | 0.439375 | 1_3:-75936183 | None:intergenic |
| ACTTGCCGATTCGGATGAAC+AGG | 0.442987 | 1_3:+75936153 | Msa0141180:CDS |
| GGTACAATGAAAGAAACCTT+TGG | 0.443823 | 1_3:+75941411 | Msa0141180:three_prime_UTR |
| GGAAGTTTCTCCTTTGTTGT+TGG | 0.444492 | 1_3:+75937387 | Msa0141180:CDS |
| ATTGCAGCGTTTCAGTGATC+GGG | 0.449810 | 1_3:+75936918 | Msa0141180:CDS |
| TAATTTCACTGATACCTGAT+AGG | 0.453387 | 1_3:-75937458 | None:intergenic |
| GGCGTTCGGTTTATACTTGG+TGG | 0.454629 | 1_3:+75940367 | Msa0141180:CDS |
| CTGCTAAAGGAGTTCGATGT+TGG | 0.456898 | 1_3:+75941221 | Msa0141180:three_prime_UTR |
| GCTGAAGGATCTACGACAGC+TGG | 0.458094 | 1_3:-75936895 | None:intergenic |
| ATGTAGACTACCCATTTGTT+GGG | 0.461033 | 1_3:+75940040 | Msa0141180:CDS |
| TGACATTGGTTCGCTTGACT+TGG | 0.461059 | 1_3:-75935842 | None:intergenic |
| AAGCACAGTTGCAACGTTGA+TGG | 0.461613 | 1_3:+75941628 | Msa0141180:three_prime_UTR |
| AGAAGAAGGTTTCAGAGTTG+AGG | 0.462996 | 1_3:-75934496 | None:intergenic |
| CGAAAAGACCACTTTCCTCT+TGG | 0.465084 | 1_3:-75937351 | None:intergenic |
| CCAAAAGATGATGGAAGACT+TGG | 0.466156 | 1_3:-75941439 | None:intergenic |
| CCAGTATATGCGTCGTCAGC+TGG | 0.470524 | 1_3:+75935909 | Msa0141180:CDS |
| AAGGTCTCGTTCGTCGTCCT+CGG | 0.470821 | 1_3:+75934438 | Msa0141180:five_prime_UTR |
| AGATATGGACAGACTACGTT+TGG | 0.477621 | 1_3:+75939085 | Msa0141180:CDS |
| AACTTCCTGTTCATCCGAAT+CGG | 0.481907 | 1_3:-75936158 | None:intergenic |
| CAAGAGTTGGCTTGCAATGG+AGG | 0.487233 | 1_3:+75938178 | Msa0141180:CDS |
| TAACCCCATTGCTAAATCAA+TGG | 0.491624 | 1_3:+75937434 | Msa0141180:CDS |
| CACCTAAATTGATCAATGGT+TGG | 0.492532 | 1_3:-75941289 | None:intergenic |
| TTAGCACCTAAATTGATCAA+TGG | 0.495510 | 1_3:-75941293 | None:intergenic |
| TGAAGCAGTGAATCTACAAA+TGG | 0.498700 | 1_3:-75941551 | None:intergenic |
| ACAGGCGTTCGGTTTATACT+TGG | 0.500052 | 1_3:+75940364 | Msa0141180:CDS |
| ATGTGGAAAGTGAAATGATA+AGG | 0.501072 | 1_3:-75936847 | None:intergenic |
| CATGGCATTATGTGCTGCCT+GGG | 0.502158 | 1_3:+75941651 | Msa0141180:three_prime_UTR |
| CTAGATTAGCCAAAAGATGA+TGG | 0.502917 | 1_3:-75941448 | None:intergenic |
| AAGTGTAAAACGGTGCGTTA+AGG | 0.504173 | 1_3:+75934419 | Msa0141180:five_prime_UTR |
| AGCATATAAATGTAGTTTGA+AGG | 0.505144 | 1_3:-75936871 | None:intergenic |
| GAACAGAAGCGGCTGGTGCT+GGG | 0.506152 | 1_3:-75939980 | None:intergenic |
| GCTATGGTTCATGAATTGAT+AGG | 0.508083 | 1_3:+75937581 | Msa0141180:CDS |
| GTAATTATCTTCATTGTTGG+CGG | 0.510705 | 1_3:+75940292 | Msa0141180:CDS |
| GAAAGTGATTCCCAACAAAT+GGG | 0.512036 | 1_3:-75940050 | None:intergenic |
| TTCACAAACAGAACAAGAGT+TGG | 0.512486 | 1_3:+75938165 | Msa0141180:CDS |
| ATGATGGTCCTTCAATATGT+TGG | 0.514547 | 1_3:-75936122 | None:intergenic |
| CAATGAAGATAATTACGTCC+TGG | 0.515072 | 1_3:-75940285 | None:intergenic |
| TTCCTCATCGATTCACAAGA+TGG | 0.517668 | 1_3:+75934556 | Msa0141180:exon |
| CATCTTTACAAGACAATCCC+AGG | 0.518622 | 1_3:-75941668 | None:intergenic |
| GGAATCACTTTCAACAAGGA+AGG | 0.521539 | 1_3:+75940061 | Msa0141180:CDS |
| AATGAAGATAATTACGTCCT+GGG | 0.523085 | 1_3:-75940284 | None:intergenic |
| TGTGACAAAACATGTGACTT+TGG | 0.528147 | 1_3:+75938096 | Msa0141180:CDS |
| ATGCCAGTAATACAGGCGTT+CGG | 0.530073 | 1_3:+75940353 | Msa0141180:CDS |
| ATCCTTTGGAAATTTACCAA+TGG | 0.534360 | 1_3:-75937633 | None:intergenic |
| TAATTATCTTCATTGTTGGC+GGG | 0.538382 | 1_3:+75940293 | Msa0141180:CDS |
| AGATCTGCCAAATACAAACC+TGG | 0.542194 | 1_3:+75939182 | Msa0141180:CDS |
| CAGCTGGCTAGTCCTAGATT+CGG | 0.543786 | 1_3:+75935925 | Msa0141180:CDS |
| GAACAAGAGTTGGCTTGCAA+TGG | 0.545187 | 1_3:+75938175 | Msa0141180:CDS |
| ATAGTGCACACAAAGCATAT+AGG | 0.545662 | 1_3:+75941390 | Msa0141180:three_prime_UTR |
| CTAACTCTTGGAAGAGGACA+TGG | 0.547182 | 1_3:+75938027 | Msa0141180:intron |
| CAGTTGCAACGTTGATGGCA+TGG | 0.547860 | 1_3:+75941633 | Msa0141180:three_prime_UTR |
| AGAAGCAAAGAAGTGTAAAA+CGG | 0.549023 | 1_3:+75934409 | Msa0141180:five_prime_UTR |
| ATCCATTGGTAAATTTCCAA+AGG | 0.552276 | 1_3:+75937631 | Msa0141180:CDS |
| CACATGATGCAAAATATGCC+AGG | 0.556225 | 1_3:-75941118 | None:intergenic |
| TTGGCTTGCAATGGAGGGCA+AGG | 0.558222 | 1_3:+75938184 | Msa0141180:CDS |
| CTGAAACGCTGCAATGCTGA+AGG | 0.561128 | 1_3:-75936910 | None:intergenic |
| GGACTTGGAAGAAGCTCAGA+GGG | 0.564191 | 1_3:+75941059 | Msa0141180:CDS |
| AAAAGAGAGGGACGAGCCAT+GGG | 0.565367 | 1_3:-75941355 | None:intergenic |
| ACAAGACATATCTGGCATGA+AGG | 0.566507 | 1_3:+75934619 | Msa0141180:CDS |
| ATTGTCTTCTAGATCAACAA+TGG | 0.566779 | 1_3:-75941264 | None:intergenic |
| GCTGGTGTTGACAAGAGAAC+TGG | 0.567007 | 1_3:+75939531 | Msa0141180:CDS |
| CGAACCAATGTCACATCTCA+AGG | 0.567079 | 1_3:+75935852 | Msa0141180:CDS |
| TCTCATCCTCGATTCTCAAA+CGG | 0.569444 | 1_3:+75934643 | Msa0141180:CDS |
| CTGAAGGATCTACGACAGCT+GGG | 0.571034 | 1_3:-75936894 | None:intergenic |
| TAGGTCCATTGATTTAGCAA+TGG | 0.572413 | 1_3:-75937439 | None:intergenic |
| AAATGTAGTTTGAAGGCATG+TGG | 0.572855 | 1_3:-75936864 | None:intergenic |
| AAAGTGGACGTCAAATCCAT+TGG | 0.576391 | 1_3:+75937617 | Msa0141180:CDS |
| GTTGTTGGTGATTGACAGGA+GGG | 0.577111 | 1_3:+75937402 | Msa0141180:CDS |
| TCCATGATTTGGAACAGAAG+CGG | 0.577839 | 1_3:-75939991 | None:intergenic |
| AATGAACATTGCGCGTAACA+TGG | 0.578002 | 1_3:+75939578 | Msa0141180:CDS |
| TGATTTGGAACAGAAGCGGC+TGG | 0.579279 | 1_3:-75939987 | None:intergenic |
| TGGTATGAATATCAAACGAC+TGG | 0.579859 | 1_3:+75937830 | Msa0141180:CDS |
| TCGTCGTCCTCGGTCGCTGG+TGG | 0.580101 | 1_3:+75934448 | Msa0141180:five_prime_UTR |
| GGAAGACTTGGCAAATCCAA+AGG | 0.581297 | 1_3:-75941427 | None:intergenic |
| GGTTGATGAATTTCAACAAG+TGG | 0.581420 | 1_3:+75937851 | Msa0141180:CDS |
| GCAGGAGGTTGTTCTGTCAT+CGG | 0.583710 | 1_3:+75937758 | Msa0141180:intron |
| TAACATGGCTCGTGGACTGA+AGG | 0.584097 | 1_3:+75939593 | Msa0141180:CDS |
| GATCTGCCAAATACAAACCT+GGG | 0.586227 | 1_3:+75939183 | Msa0141180:CDS |
| TTGAATCGCACTCAATTGCA+AGG | 0.586661 | 1_3:-75941322 | None:intergenic |
| ATTCAAGAGCAAGCCACCCA+TGG | 0.587329 | 1_3:+75941339 | Msa0141180:three_prime_UTR |
| TGTTGTTGGTGATTGACAGG+AGG | 0.601755 | 1_3:+75937401 | Msa0141180:CDS |
| ATATGCTTTACGATATGAGA+AGG | 0.606299 | 1_3:+75939115 | Msa0141180:CDS |
| TAAATTTCCAAAGGATCAGG+AGG | 0.607951 | 1_3:+75937640 | Msa0141180:CDS |
| AGATCCACCACCAGCGACCG+AGG | 0.611306 | 1_3:-75934455 | None:intergenic |
| TACTGGATATTCTCTGATGT+AGG | 0.612269 | 1_3:-75935892 | None:intergenic |
| CGGCAAGTAAGTGAATATGA+TGG | 0.614988 | 1_3:-75936138 | None:intergenic |
| AAGAGTTGGCTTGCAATGGA+GGG | 0.617235 | 1_3:+75938179 | Msa0141180:CDS |
| AATCAGAACATCCAAACAGT+AGG | 0.619362 | 1_3:+75937882 | Msa0141180:CDS |
| TGGAAAGCATTGTCAAAGGA+CGG | 0.621542 | 1_3:+75940010 | Msa0141180:CDS |
| AGAGAGGGACGAGCCATGGG+TGG | 0.623028 | 1_3:-75941352 | None:intergenic |
| ATTGCGCGTAACATGGCTCG+TGG | 0.624579 | 1_3:+75939585 | Msa0141180:CDS |
| ATCATGGAAAGCATTGTCAA+AGG | 0.625157 | 1_3:+75940006 | Msa0141180:CDS |
| CTGTCAATCACCAACAACAA+AGG | 0.629632 | 1_3:-75937397 | None:intergenic |
| ATCGTACCGTTTGAGAATCG+AGG | 0.631514 | 1_3:-75934649 | None:intergenic |
| TATTCTCTGATGTAGGTCGA+AGG | 0.632119 | 1_3:-75935885 | None:intergenic |
| CGCCATCTTGTGAATCGATG+AGG | 0.633199 | 1_3:-75934558 | None:intergenic |
| ATTGCCTTGAGATGTGACAT+TGG | 0.633767 | 1_3:-75935856 | None:intergenic |
| CTGATGTACCAAGAGGAAAG+TGG | 0.644198 | 1_3:+75937343 | Msa0141180:CDS |
| GTTGGGAATCACTTTCAACA+AGG | 0.663736 | 1_3:+75940057 | Msa0141180:CDS |
| GGACAACATATGAAGAGTCA+CGG | 0.665146 | 1_3:+75940314 | Msa0141180:CDS |
| ACAGAAACTGATGTACCAAG+AGG | 0.673910 | 1_3:+75937336 | Msa0141180:intron |
| AAAGCTGCATTAATTGAACA+GGG | 0.678420 | 1_3:-75939142 | None:intergenic |
| ATGAAGATAATTACGTCCTG+GGG | 0.679958 | 1_3:-75940283 | None:intergenic |
| AGGAATCCAAGACAACAAAG+TGG | 0.684320 | 1_3:+75937601 | Msa0141180:CDS |
| GGGACTTGGAAGAAGCTCAG+AGG | 0.688488 | 1_3:+75941058 | Msa0141180:CDS |
| ATCTGCCAAATACAAACCTG+GGG | 0.695349 | 1_3:+75939184 | Msa0141180:CDS |
| GGTCCATTGATTTAGCAATG+GGG | 0.723808 | 1_3:-75937437 | None:intergenic |
| GGATATACTTCAAACAACAG+AGG | 0.738656 | 1_3:-75941097 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATGTAACTAAAAAAATA+AGG | + | chr1_3:75934377-75934396 | Msa0141180:five_prime_UTR | 10.0% |
| !!! | TTATTTTTGTCATTTAATTA+CGG | + | chr1_3:75936344-75936363 | Msa0141180:intron | 10.0% |
| !! | TTAAAAAAAATTATGCATAT+AGG | + | chr1_3:75937527-75937546 | Msa0141180:intron | 10.0% |
| !! | TATGATAATAATAATAAACA+TGG | - | chr1_3:75940212-75940231 | None:intergenic | 10.0% |
| !!! | TTTTTTCATTTATGTTTCAA+AGG | + | chr1_3:75935489-75935508 | Msa0141180:intron | 15.0% |
| !!! | TAAATAAATAAGGGTATTAT+AGG | + | chr1_3:75936501-75936520 | Msa0141180:intron | 15.0% |
| !! | ATCAAAATATTAATTTCCTA+GGG | - | chr1_3:75938665-75938684 | None:intergenic | 15.0% |
| !! | AATCAAAATATTAATTTCCT+AGG | - | chr1_3:75938666-75938685 | None:intergenic | 15.0% |
| !!! | ATTTATCTAAGGTTTAAAAT+TGG | - | chr1_3:75939297-75939316 | None:intergenic | 15.0% |
| !!! | GCTTTTTATCTTTATAATAT+TGG | + | chr1_3:75939635-75939654 | Msa0141180:intron | 15.0% |
| !!! | TAAGAAAAATAGTATGTTTT+TGG | + | chr1_3:75939714-75939733 | Msa0141180:intron | 15.0% |
| !!! | GCAATAATGATTTTTATTTT+TGG | + | chr1_3:75940502-75940521 | Msa0141180:intron | 15.0% |
| !! | AAATAACTAAGAACTTATTT+GGG | - | chr1_3:75940809-75940828 | None:intergenic | 15.0% |
| !! | AAAATAACTAAGAACTTATT+TGG | - | chr1_3:75940810-75940829 | None:intergenic | 15.0% |
| !!! | TTTTCTTTATACATATACAT+AGG | - | chr1_3:75941199-75941218 | None:intergenic | 15.0% |
| !! | ATTGTGAATGAAAAATTGAT+AGG | - | chr1_3:75934695-75934714 | None:intergenic | 20.0% |
| !!! | AGTTTGAATTATGATTCTTT+TGG | + | chr1_3:75934732-75934751 | Msa0141180:intron | 20.0% |
| !!! | GTTACTCTTATAATTTTTCT+AGG | - | chr1_3:75935165-75935184 | None:intergenic | 20.0% |
| !! | ATTTATGTTTCAAAGGATTA+GGG | + | chr1_3:75935496-75935515 | Msa0141180:intron | 20.0% |
| !! | CCTCTTCAAAAAAAAAAAAA+AGG | - | chr1_3:75935538-75935557 | None:intergenic | 20.0% |
| !!! | CCTTTTTTTTTTTTTTGAAG+AGG | + | chr1_3:75935535-75935554 | Msa0141180:intron | 20.0% |
| !! | CTAAATATTGCTAGTTATAA+TGG | + | chr1_3:75935577-75935596 | Msa0141180:intron | 20.0% |
| !! | AATTACAAACTCAATTCATA+AGG | - | chr1_3:75936019-75936038 | None:intergenic | 20.0% |
| !! | AAATGACAAAAATAATGAGA+CGG | - | chr1_3:75936339-75936358 | None:intergenic | 20.0% |
| !!! | ATTATTTTGATACTATACAC+TGG | - | chr1_3:75936578-75936597 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTTGACATTAAAA+CGG | + | chr1_3:75936959-75936978 | Msa0141180:CDS | 20.0% |
| !!! | AATCCAATCTATTTGTTATT+TGG | + | chr1_3:75937221-75937240 | Msa0141180:intron | 20.0% |
| !! | CAATCATTAATGATATAAGA+TGG | - | chr1_3:75937272-75937291 | None:intergenic | 20.0% |
| !!! | AAATATTTGAAATTCTCCTT+TGG | + | chr1_3:75938235-75938254 | Msa0141180:intron | 20.0% |
| !! | ATGTTTCTTAGTTTATTTGA+TGG | - | chr1_3:75938290-75938309 | None:intergenic | 20.0% |
| !! | TGTAAATTTCAGAAATTAGA+CGG | - | chr1_3:75938365-75938384 | None:intergenic | 20.0% |
| !! | AAAATATTGCAAAGCTTAAA+AGG | - | chr1_3:75938455-75938474 | None:intergenic | 20.0% |
| !! | ATAACAGATTAACTACAATA+AGG | - | chr1_3:75938617-75938636 | None:intergenic | 20.0% |
| !! | TTTACTCTTATACTTTGTTA+CGG | - | chr1_3:75938791-75938810 | None:intergenic | 20.0% |
| !! | CTAATAACAGATATTATTCA+GGG | - | chr1_3:75938819-75938838 | None:intergenic | 20.0% |
| !! | ACTAATAACAGATATTATTC+AGG | - | chr1_3:75938820-75938839 | None:intergenic | 20.0% |
| !!! | ATAATTTGTTGTGTTAAACA+TGG | - | chr1_3:75938860-75938879 | None:intergenic | 20.0% |
| !! | ACATATAACAACAATTAACA+GGG | - | chr1_3:75938944-75938963 | None:intergenic | 20.0% |
| !! | TACATATAACAACAATTAAC+AGG | - | chr1_3:75938945-75938964 | None:intergenic | 20.0% |
| !!! | TTAATTGTTGTTATATGTAC+TGG | + | chr1_3:75938946-75938965 | Msa0141180:intron | 20.0% |
| !! | TAGGTTATAAAGTAGAAATT+TGG | + | chr1_3:75939371-75939390 | Msa0141180:intron | 20.0% |
| !!! | TGCAAAGTTTTTGTATTTTT+AGG | + | chr1_3:75939769-75939788 | Msa0141180:intron | 20.0% |
| !!! | GCAAAGTTTTTGTATTTTTA+GGG | + | chr1_3:75939770-75939789 | Msa0141180:intron | 20.0% |
| !!! | AAAGGTATAAAAACTGTATA+GGG | + | chr1_3:75939798-75939817 | Msa0141180:intron | 20.0% |
| !! | AATAATTCGATGATTGAATA+TGG | - | chr1_3:75939862-75939881 | None:intergenic | 20.0% |
| !! | CAAATTTGGATATAAATCAT+TGG | - | chr1_3:75940161-75940180 | None:intergenic | 20.0% |
| !! | TTATTATTATCATAGAACTG+TGG | + | chr1_3:75940218-75940237 | Msa0141180:intron | 20.0% |
| !! | CTCATAAAGATAATTTAGAT+TGG | + | chr1_3:75940424-75940443 | Msa0141180:intron | 20.0% |
| !!! | ATTGACAAAAATTTTAGTCA+TGG | + | chr1_3:75940544-75940563 | Msa0141180:intron | 20.0% |
| !!! | AAAAATTTTAGTCATGGTAT+GGG | + | chr1_3:75940550-75940569 | Msa0141180:intron | 20.0% |
| !! | TTATACAAGAAATGGTAAAA+TGG | + | chr1_3:75940664-75940683 | Msa0141180:intron | 20.0% |
| !!! | TTTGAAGTTTGTAAAAGAAA+TGG | - | chr1_3:75940711-75940730 | None:intergenic | 20.0% |
| !! | TATAAAGAAAAAACTGCTAA+AGG | + | chr1_3:75941208-75941227 | Msa0141180:three_prime_UTR | 20.0% |
| !!! | TTTTAGTATACAAAAGAATG+GGG | - | chr1_3:75941525-75941544 | None:intergenic | 20.0% |
| !!! | CTTTTAGTATACAAAAGAAT+GGG | - | chr1_3:75941526-75941545 | None:intergenic | 20.0% |
| !!! | TCTTTTAGTATACAAAAGAA+TGG | - | chr1_3:75941527-75941546 | None:intergenic | 20.0% |
| !!! | ATAATTTTCAAGTTCAGATT+GGG | + | chr1_3:75941573-75941592 | Msa0141180:three_prime_UTR | 20.0% |
| !! | AAATAACACCCAAATTTATT+CGG | - | chr1_3:75941732-75941751 | None:intergenic | 20.0% |
| !!! | TGGGTGTTATTTTTTTTTTA+AGG | + | chr1_3:75941740-75941759 | Msa0141180:three_prime_UTR | 20.0% |
| ! | ATCACGAGTAAATTGTAATT+GGG | + | chr1_3:75934755-75934774 | Msa0141180:intron | 25.0% |
| !! | TTTTCTCAAAGATGAAAACA+CGG | + | chr1_3:75934792-75934811 | Msa0141180:intron | 25.0% |
| ! | TGTTTAAACTATGTAACTTG+TGG | - | chr1_3:75934849-75934868 | None:intergenic | 25.0% |
| ! | TTTAAACATCAAATTCAAGC+TGG | + | chr1_3:75934861-75934880 | Msa0141180:intron | 25.0% |
| !!! | CACTTAATTTATTTTCGTGT+TGG | - | chr1_3:75935005-75935024 | None:intergenic | 25.0% |
| ! | CGAAAATAAATTAAGTGTAG+CGG | + | chr1_3:75935008-75935027 | Msa0141180:intron | 25.0% |
| ! | AGATCTAGATATTAATGAGT+TGG | + | chr1_3:75935194-75935213 | Msa0141180:intron | 25.0% |
| !! | TAAGATTTGGTTGTTGTTAT+TGG | + | chr1_3:75935269-75935288 | Msa0141180:intron | 25.0% |
| !! | AAGATTTGGTTGTTGTTATT+GGG | + | chr1_3:75935270-75935289 | Msa0141180:intron | 25.0% |
| ! | AGTAAATTATCATTGTGAGT+AGG | + | chr1_3:75935298-75935317 | Msa0141180:intron | 25.0% |
| !! | TTTTAAACTACTGTACAGTA+TGG | + | chr1_3:75935439-75935458 | Msa0141180:intron | 25.0% |
| ! | CATTTATGTTTCAAAGGATT+AGG | + | chr1_3:75935495-75935514 | Msa0141180:intron | 25.0% |
| !!! | TACCTGGATTATTTGATTTT+TGG | + | chr1_3:75935691-75935710 | Msa0141180:intron | 25.0% |
| !!! | AGAAGTATTTTTAGTAGAGT+TGG | + | chr1_3:75935807-75935826 | Msa0141180:CDS | 25.0% |
| ! | AACAATTAAAGAACCTACAT+AGG | - | chr1_3:75935960-75935979 | None:intergenic | 25.0% |
| ! | AGAAAACTGTAATTTCAGAA+TGG | - | chr1_3:75936102-75936121 | None:intergenic | 25.0% |
| !! | TTTAAAGTTTGTAGTCTGTA+TGG | + | chr1_3:75936225-75936244 | Msa0141180:intron | 25.0% |
| ! | TAATGAGACGGAATATATAA+GGG | - | chr1_3:75936327-75936346 | None:intergenic | 25.0% |
| ! | ATAATGAGACGGAATATATA+AGG | - | chr1_3:75936328-75936347 | None:intergenic | 25.0% |
| ! | AGTGGAGATGTAAATAAATA+AGG | + | chr1_3:75936491-75936510 | Msa0141180:intron | 25.0% |
| ! | GTGGAGATGTAAATAAATAA+GGG | + | chr1_3:75936492-75936511 | Msa0141180:intron | 25.0% |
| ! | TCATTTATCAGATAAAGAAC+CGG | - | chr1_3:75936680-75936699 | None:intergenic | 25.0% |
| ! | AGCATATAAATGTAGTTTGA+AGG | - | chr1_3:75936874-75936893 | None:intergenic | 25.0% |
| ! | GTTCTTTGATATCTAATAAC+TGG | - | chr1_3:75936988-75937007 | None:intergenic | 25.0% |
| ! | TTATACTTCGATCATTTCTA+TGG | + | chr1_3:75937148-75937167 | Msa0141180:intron | 25.0% |
| ! | TATATCATTAATGATTGTGC+TGG | + | chr1_3:75937275-75937294 | Msa0141180:intron | 25.0% |
| !!! | TTTGTGGTGTTATATTTTAC+AGG | + | chr1_3:75937559-75937578 | Msa0141180:intron | 25.0% |
| !! | TTTTTACTAATTCTTATCGC+AGG | + | chr1_3:75937740-75937759 | Msa0141180:intron | 25.0% |
| !!! | ATACATGTTAGCTTTGAAAA+AGG | - | chr1_3:75937793-75937812 | None:intergenic | 25.0% |
| !!! | TTAGTTCTTTCTTTTTGATG+CGG | + | chr1_3:75938717-75938736 | Msa0141180:intron | 25.0% |
| ! | ATTTCCAACAATATGAGTTA+AGG | + | chr1_3:75938757-75938776 | Msa0141180:intron | 25.0% |
| ! | AATTCATGCGTAAGAATATA+TGG | - | chr1_3:75939241-75939260 | None:intergenic | 25.0% |
| ! | AAATTGGAAAACATCCATTA+AGG | - | chr1_3:75939281-75939300 | None:intergenic | 25.0% |
| ! | AAACCTTAGATAAATAGTAG+TGG | + | chr1_3:75939302-75939321 | Msa0141180:intron | 25.0% |
| ! | AACCTTAGATAAATAGTAGT+GGG | + | chr1_3:75939303-75939322 | Msa0141180:intron | 25.0% |
| ! | ATTTAAGAACAGCATTTAGA+TGG | + | chr1_3:75939412-75939431 | Msa0141180:intron | 25.0% |
| !! | CAAAGGTATAAAAACTGTAT+AGG | + | chr1_3:75939797-75939816 | Msa0141180:intron | 25.0% |
| ! | TCAATATTGTCAAACTTTAC+AGG | + | chr1_3:75939828-75939847 | Msa0141180:intron | 25.0% |
| ! | CAATATTGTCAAACTTTACA+GGG | + | chr1_3:75939829-75939848 | Msa0141180:intron | 25.0% |
| ! | TTATATTTGTGAACTTCTAG+AGG | + | chr1_3:75940118-75940137 | Msa0141180:intron | 25.0% |
| ! | AATAATAAACATGGAGAAAC+AGG | - | chr1_3:75940203-75940222 | None:intergenic | 25.0% |
| !! | TAAAATTTTTGTCAATAGCC+TGG | - | chr1_3:75940540-75940559 | None:intergenic | 25.0% |
| !!! | CAAAAATTTTAGTCATGGTA+TGG | + | chr1_3:75940549-75940568 | Msa0141180:intron | 25.0% |
| !! | TGTAAATGATGTGACATTTT+TGG | - | chr1_3:75940623-75940642 | None:intergenic | 25.0% |
| ! | CCATTTCTTGTATAAGTATT+TGG | - | chr1_3:75940659-75940678 | None:intergenic | 25.0% |
| ! | CCAAATACTTATACAAGAAA+TGG | + | chr1_3:75940656-75940675 | Msa0141180:intron | 25.0% |
| !!! | AACTTATTTGGGTTGAAAAA+CGG | - | chr1_3:75940798-75940817 | None:intergenic | 25.0% |
| !!! | TTACGCTTGTTTTTATTGAT+TGG | + | chr1_3:75940927-75940946 | Msa0141180:intron | 25.0% |
| !!! | CATAATTTTCAAGTTCAGAT+TGG | + | chr1_3:75941572-75941591 | Msa0141180:three_prime_UTR | 25.0% |
| ! | AGAAGCAAAGAAGTGTAAAA+CGG | + | chr1_3:75934409-75934428 | Msa0141180:five_prime_UTR | 30.0% |
| GATCACGAGTAAATTGTAAT+TGG | + | chr1_3:75934754-75934773 | Msa0141180:intron | 30.0% | |
| TCACGAGTAAATTGTAATTG+GGG | + | chr1_3:75934756-75934775 | Msa0141180:intron | 30.0% | |
| GACAACATTATAGAGAGTTT+AGG | + | chr1_3:75935069-75935088 | Msa0141180:intron | 30.0% | |
| ! | ATGAGTTGGATACAACATTA+TGG | + | chr1_3:75935208-75935227 | Msa0141180:intron | 30.0% |
| ! | ACATTGTTTTCTTTCGACAA+TGG | + | chr1_3:75935398-75935417 | Msa0141180:intron | 30.0% |
| ! | GGATTAGGGAAAATATTTTG+AGG | + | chr1_3:75935510-75935529 | Msa0141180:intron | 30.0% |
| ! | TTAGAAGCCTCGTAATATTT+TGG | - | chr1_3:75935561-75935580 | None:intergenic | 30.0% |
| AGCCAAAAATCAAATAATCC+AGG | - | chr1_3:75935696-75935715 | None:intergenic | 30.0% | |
| !!! | ATTTTTGGCTGTTGTTGATA+AGG | + | chr1_3:75935706-75935725 | Msa0141180:intron | 30.0% |
| ! | AGTTTTCTCCAACATATTGA+AGG | + | chr1_3:75936114-75936133 | Msa0141180:intron | 30.0% |
| AATTCTCATGAAACATGTTC+CGG | + | chr1_3:75936604-75936623 | Msa0141180:intron | 30.0% | |
| AATTAGAATACCCTTCTATC+CGG | - | chr1_3:75936626-75936645 | None:intergenic | 30.0% | |
| TAGAAAAGGTCACAATTATG+TGG | - | chr1_3:75936649-75936668 | None:intergenic | 30.0% | |
| ! | ATTTGAGATTGCAACACAAA+GGG | - | chr1_3:75936740-75936759 | None:intergenic | 30.0% |
| ATGTGGAAAGTGAAATGATA+AGG | - | chr1_3:75936850-75936869 | None:intergenic | 30.0% | |
| ! | TGCTATTCTTTTTGCAATGT+CGG | - | chr1_3:75937013-75937032 | None:intergenic | 30.0% |
| AAAATACAAGTTAGACAAGG+TGG | - | chr1_3:75937059-75937078 | None:intergenic | 30.0% | |
| CACAAAATACAAGTTAGACA+AGG | - | chr1_3:75937062-75937081 | None:intergenic | 30.0% | |
| !! | CTTGTCTAACTTGTATTTTG+TGG | + | chr1_3:75937060-75937079 | Msa0141180:intron | 30.0% |
| TTCTGAATTGCATAATGCAT+TGG | + | chr1_3:75937171-75937190 | Msa0141180:intron | 30.0% | |
| TCTGAATTGCATAATGCATT+GGG | + | chr1_3:75937172-75937191 | Msa0141180:intron | 30.0% | |
| CAGCCAAATAACAAATAGAT+TGG | - | chr1_3:75937227-75937246 | None:intergenic | 30.0% | |
| !! | CAATCTATTTGTTATTTGGC+TGG | + | chr1_3:75937225-75937244 | Msa0141180:intron | 30.0% |
| ! | TCTTTTCGATTTTAGACGAA+TGG | + | chr1_3:75937366-75937385 | Msa0141180:CDS | 30.0% |
| TAATTTCACTGATACCTGAT+AGG | - | chr1_3:75937461-75937480 | None:intergenic | 30.0% | |
| ATATAGGTAATGCTCATTTG+TGG | + | chr1_3:75937543-75937562 | Msa0141180:intron | 30.0% | |
| ! | GTGTTATATTTTACAGGCTA+TGG | + | chr1_3:75937565-75937584 | Msa0141180:intron | 30.0% |
| ATCCATTGGTAAATTTCCAA+AGG | + | chr1_3:75937631-75937650 | Msa0141180:CDS | 30.0% | |
| ! | ATCCTTTGGAAATTTACCAA+TGG | - | chr1_3:75937636-75937655 | None:intergenic | 30.0% |
| GCTAACATGTATGAGAATTT+CGG | + | chr1_3:75937801-75937820 | Msa0141180:CDS | 30.0% | |
| TATGAGAATTTCGGAGATAT+TGG | + | chr1_3:75937810-75937829 | Msa0141180:CDS | 30.0% | |
| ! | AAAAGTACAAACCTACTGTT+TGG | - | chr1_3:75937896-75937915 | None:intergenic | 30.0% |
| CAAGAGTTAGATCATGAAAT+CGG | - | chr1_3:75938017-75938036 | None:intergenic | 30.0% | |
| CATTGGTACTAGTAAATAAC+TGG | - | chr1_3:75938314-75938333 | None:intergenic | 30.0% | |
| !! | TTCAAATGCTTTTTACTGGT+GGG | - | chr1_3:75938409-75938428 | None:intergenic | 30.0% |
| !! | TTCCTTCAAATGCTTTTTAC+TGG | - | chr1_3:75938413-75938432 | None:intergenic | 30.0% |
| CAGATTAACTACAATAAGGA+TGG | - | chr1_3:75938613-75938632 | None:intergenic | 30.0% | |
| GTTAATCTGTTATCTGTCTT+CGG | + | chr1_3:75938624-75938643 | Msa0141180:intron | 30.0% | |
| ! | TAGTTCTTTCTTTTTGATGC+GGG | + | chr1_3:75938718-75938737 | Msa0141180:intron | 30.0% |
| TTGTCCTTAACTCATATTGT+TGG | - | chr1_3:75938764-75938783 | None:intergenic | 30.0% | |
| AACAATATGAGTTAAGGACA+AGG | + | chr1_3:75938763-75938782 | Msa0141180:intron | 30.0% | |
| !!! | TTATTTTTATCCAACCGACA+TGG | + | chr1_3:75938898-75938917 | Msa0141180:intron | 30.0% |
| TGAGTGATAAGTGATAACTT+TGG | + | chr1_3:75939006-75939025 | Msa0141180:intron | 30.0% | |
| ! | CAATGAAAGCATATCAGATA+TGG | + | chr1_3:75939070-75939089 | Msa0141180:CDS | 30.0% |
| ATATGCTTTACGATATGAGA+AGG | + | chr1_3:75939115-75939134 | Msa0141180:CDS | 30.0% | |
| AAAGCTGCATTAATTGAACA+GGG | - | chr1_3:75939145-75939164 | None:intergenic | 30.0% | |
| AAAAGCTGCATTAATTGAAC+AGG | - | chr1_3:75939146-75939165 | None:intergenic | 30.0% | |
| ACCTTAGATAAATAGTAGTG+GGG | + | chr1_3:75939304-75939323 | Msa0141180:intron | 30.0% | |
| !!! | TGATTTTGCTGCTTTTGATA+TGG | + | chr1_3:75939436-75939455 | Msa0141180:intron | 30.0% |
| !!! | TGTATTTTTAGGGACTACAA+AGG | + | chr1_3:75939780-75939799 | Msa0141180:intron | 30.0% |
| TATAAAAACTGTATAGGGAC+TGG | + | chr1_3:75939803-75939822 | Msa0141180:intron | 30.0% | |
| ! | TCGATGATTGAATATGGTTT+TGG | - | chr1_3:75939856-75939875 | None:intergenic | 30.0% |
| AATAATCTGAGTTGTGAAAC+TGG | + | chr1_3:75940241-75940260 | Msa0141180:intron | 30.0% | |
| AATGAAGATAATTACGTCCT+GGG | - | chr1_3:75940287-75940306 | None:intergenic | 30.0% | |
| GACGTAATTATCTTCATTGT+TGG | + | chr1_3:75940289-75940308 | Msa0141180:CDS | 30.0% | |
| GTAATTATCTTCATTGTTGG+CGG | + | chr1_3:75940292-75940311 | Msa0141180:CDS | 30.0% | |
| TAATTATCTTCATTGTTGGC+GGG | + | chr1_3:75940293-75940312 | Msa0141180:CDS | 30.0% | |
| CTTCTGTTCTTAATTCGAAA+AGG | + | chr1_3:75940392-75940411 | Msa0141180:CDS | 30.0% | |
| ! | AAGTGAAAGTACAGTTTGAA+AGG | - | chr1_3:75940472-75940491 | None:intergenic | 30.0% |
| TTCAAACTGTACTTTCACTT+TGG | + | chr1_3:75940472-75940491 | Msa0141180:intron | 30.0% | |
| !! | TTTTGGAAATTGATAGTTCC+AGG | + | chr1_3:75940519-75940538 | Msa0141180:intron | 30.0% |
| TTTGGGCGATAAAGTTTATT+GGG | + | chr1_3:75940867-75940886 | Msa0141180:intron | 30.0% | |
| ACAAAATCTTTCAATCTGCA+AGG | - | chr1_3:75940908-75940927 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTATTGATTGGTCC+TGG | + | chr1_3:75940933-75940952 | Msa0141180:intron | 30.0% |
| !! | TGTTTTTATTGATTGGTCCT+GGG | + | chr1_3:75940934-75940953 | Msa0141180:intron | 30.0% |
| ! | ATTTTGGATTCTTAGAACAG+AGG | + | chr1_3:75941007-75941026 | Msa0141180:intron | 30.0% |
| ATTGTCTTCTAGATCAACAA+TGG | - | chr1_3:75941267-75941286 | None:intergenic | 30.0% | |
| TTAGCACCTAAATTGATCAA+TGG | - | chr1_3:75941296-75941315 | None:intergenic | 30.0% | |
| TGATCAATTTAGGTGCTAAT+CGG | + | chr1_3:75941297-75941316 | Msa0141180:three_prime_UTR | 30.0% | |
| TTTCTCGAGAAAAAAAGAGA+GGG | - | chr1_3:75941370-75941389 | None:intergenic | 30.0% | |
| ! | TTTTCTCGAGAAAAAAAGAG+AGG | - | chr1_3:75941371-75941390 | None:intergenic | 30.0% |
| TTGTCTTCACCGAATAAATT+TGG | + | chr1_3:75941720-75941739 | Msa0141180:three_prime_UTR | 30.0% | |
| TGTCTTCACCGAATAAATTT+GGG | + | chr1_3:75941721-75941740 | Msa0141180:three_prime_UTR | 30.0% | |
| ! | GATAGGATTTGATAGCATTG+TGG | - | chr1_3:75934678-75934697 | None:intergenic | 35.0% |
| CACGAGTAAATTGTAATTGG+GGG | + | chr1_3:75934757-75934776 | Msa0141180:intron | 35.0% | |
| AGTAAATTGTAATTGGGGGT+GGG | + | chr1_3:75934761-75934780 | Msa0141180:intron | 35.0% | |
| AAACATCAAATTCAAGCTGG+TGG | + | chr1_3:75934864-75934883 | Msa0141180:intron | 35.0% | |
| CATATCACATAAAACACCCA+AGG | - | chr1_3:75934906-75934925 | None:intergenic | 35.0% | |
| TTTAGGTACTTTGTGCATGT+TGG | + | chr1_3:75935086-75935105 | Msa0141180:intron | 35.0% | |
| TTAGGTACTTTGTGCATGTT+GGG | + | chr1_3:75935087-75935106 | Msa0141180:intron | 35.0% | |
| AGTCAAATCACTAGAGACAA+AGG | + | chr1_3:75935135-75935154 | Msa0141180:intron | 35.0% | |
| CTACTTAGTGGGATAAGATT+TGG | + | chr1_3:75935256-75935275 | Msa0141180:intron | 35.0% | |
| CTGCCTTCGTTAATTTCTTA+CGG | + | chr1_3:75935354-75935373 | Msa0141180:intron | 35.0% | |
| GTTCCGTAAGAAATTAACGA+AGG | - | chr1_3:75935360-75935379 | None:intergenic | 35.0% | |
| ! | TGTTTTCTTTCGACAATGGA+TGG | + | chr1_3:75935402-75935421 | Msa0141180:intron | 35.0% |
| CTTGTAAAGCTATTACCTGT+GGG | + | chr1_3:75935635-75935654 | Msa0141180:intron | 35.0% | |
| ! | CTATTACCTGTGGGTTATAT+TGG | + | chr1_3:75935644-75935663 | Msa0141180:intron | 35.0% |
| AAGATACCATTGTAACTTGG+TGG | + | chr1_3:75935668-75935687 | Msa0141180:intron | 35.0% | |
| TACTGGATATTCTCTGATGT+AGG | - | chr1_3:75935895-75935914 | None:intergenic | 35.0% | |
| ATGATGGTCCTTCAATATGT+TGG | - | chr1_3:75936125-75936144 | None:intergenic | 35.0% | |
| ! | TATTCACTTACTTGCCGATT+CGG | + | chr1_3:75936144-75936163 | Msa0141180:CDS | 35.0% |
| AATACGGACAATGTAGTCAA+AGG | - | chr1_3:75936428-75936447 | None:intergenic | 35.0% | |
| TACATTGTCCGTATTGTAGT+AGG | + | chr1_3:75936433-75936452 | Msa0141180:intron | 35.0% | |
| ACCAAACTCCTACTACAATA+CGG | - | chr1_3:75936444-75936463 | None:intergenic | 35.0% | |
| ! | GACCTTTTCTATTTACTGTC+CGG | + | chr1_3:75936658-75936677 | Msa0141180:intron | 35.0% |
| AACCGGACAGTAAATAGAAA+AGG | - | chr1_3:75936663-75936682 | None:intergenic | 35.0% | |
| ! | CATTTGAGATTGCAACACAA+AGG | - | chr1_3:75936741-75936760 | None:intergenic | 35.0% |
| TGTGTTGCAATCTCAAATGA+TGG | + | chr1_3:75936742-75936761 | Msa0141180:intron | 35.0% | |
| GTGTTGCAATCTCAAATGAT+GGG | + | chr1_3:75936743-75936762 | Msa0141180:intron | 35.0% | |
| ! | AAATGTAGTTTGAAGGCATG+TGG | - | chr1_3:75936867-75936886 | None:intergenic | 35.0% |
| !!! | GATGTTGCATTTTAGCTACT+TGG | + | chr1_3:75937099-75937118 | Msa0141180:intron | 35.0% |
| TGATATAAGATGGCATGTTG+TGG | - | chr1_3:75937262-75937281 | None:intergenic | 35.0% | |
| TAACCCCATTGCTAAATCAA+TGG | + | chr1_3:75937434-75937453 | Msa0141180:CDS | 35.0% | |
| !! | AGGTCCATTGATTTAGCAAT+GGG | - | chr1_3:75937441-75937460 | None:intergenic | 35.0% |
| !! | TAGGTCCATTGATTTAGCAA+TGG | - | chr1_3:75937442-75937461 | None:intergenic | 35.0% |
| GCTATGGTTCATGAATTGAT+AGG | + | chr1_3:75937581-75937600 | Msa0141180:CDS | 35.0% | |
| TGGTAAATTTCCAAAGGATC+AGG | + | chr1_3:75937637-75937656 | Msa0141180:CDS | 35.0% | |
| TAAATTTCCAAAGGATCAGG+AGG | + | chr1_3:75937640-75937659 | Msa0141180:CDS | 35.0% | |
| TTGGATACATTTCTTGCACT+GGG | + | chr1_3:75937663-75937682 | Msa0141180:intron | 35.0% | |
| TTACTAATTCTTATCGCAGG+AGG | + | chr1_3:75937743-75937762 | Msa0141180:intron | 35.0% | |
| TGGTATGAATATCAAACGAC+TGG | + | chr1_3:75937830-75937849 | Msa0141180:CDS | 35.0% | |
| !! | GGTTGATGAATTTCAACAAG+TGG | + | chr1_3:75937851-75937870 | Msa0141180:CDS | 35.0% |
| AATCAGAACATCCAAACAGT+AGG | + | chr1_3:75937882-75937901 | Msa0141180:CDS | 35.0% | |
| TCATAACTGTAACAGCTGAA+AGG | - | chr1_3:75937948-75937967 | None:intergenic | 35.0% | |
| CGATTTCATGATCTAACTCT+TGG | + | chr1_3:75938015-75938034 | Msa0141180:intron | 35.0% | |
| AGGGTAGTTGTCAACAAATT+TGG | - | chr1_3:75938053-75938072 | None:intergenic | 35.0% | |
| ! | CATGCATTTTTCTGTACTCA+GGG | - | chr1_3:75938072-75938091 | None:intergenic | 35.0% |
| CTGAGTACAGAAAAATGCAT+GGG | + | chr1_3:75938071-75938090 | Msa0141180:CDS | 35.0% | |
| TGTGACAAAACATGTGACTT+TGG | + | chr1_3:75938096-75938115 | Msa0141180:CDS | 35.0% | |
| TTCACAAACAGAACAAGAGT+TGG | + | chr1_3:75938165-75938184 | Msa0141180:CDS | 35.0% | |
| !! | TAACTTTTGAGAACAGCCAA+AGG | - | chr1_3:75938254-75938273 | None:intergenic | 35.0% |
| CATAGTGACATTACTGACAT+TGG | - | chr1_3:75938331-75938350 | None:intergenic | 35.0% | |
| !! | TCAAATGCTTTTTACTGGTG+GGG | - | chr1_3:75938408-75938427 | None:intergenic | 35.0% |
| !! | CTTCAAATGCTTTTTACTGG+TGG | - | chr1_3:75938410-75938429 | None:intergenic | 35.0% |
| !! | CACCAGTAAAAAGCATTTGA+AGG | + | chr1_3:75938408-75938427 | Msa0141180:intron | 35.0% |
| TTGCTGTAGCAGCATTTATT+GGG | + | chr1_3:75938511-75938530 | Msa0141180:intron | 35.0% | |
| !! | AGTGCTGATATTTGTTCGAA+AGG | + | chr1_3:75938582-75938601 | Msa0141180:intron | 35.0% |
| ! | AGTTCTTTCTTTTTGATGCG+GGG | + | chr1_3:75938719-75938738 | Msa0141180:intron | 35.0% |
| ! | AGAGTTGCATTTTTCCATGT+CGG | - | chr1_3:75938915-75938934 | None:intergenic | 35.0% |
| ATTTACCCCAGGTTTGTATT+TGG | - | chr1_3:75939192-75939211 | None:intergenic | 35.0% | |
| CAACAGTTTAAATTTACCCC+AGG | - | chr1_3:75939203-75939222 | None:intergenic | 35.0% | |
| TTAAGGATTAAGAGACGTTC+AGG | - | chr1_3:75939264-75939283 | None:intergenic | 35.0% | |
| GAACGTCTCTTAATCCTTAA+TGG | + | chr1_3:75939264-75939283 | Msa0141180:intron | 35.0% | |
| CCTTAGATAAATAGTAGTGG+GGG | + | chr1_3:75939305-75939324 | Msa0141180:intron | 35.0% | |
| ! | TAGTGGGGGTGAAATTATTT+TGG | + | chr1_3:75939319-75939338 | Msa0141180:intron | 35.0% |
| ! | AGTGGGGGTGAAATTATTTT+GGG | + | chr1_3:75939320-75939339 | Msa0141180:intron | 35.0% |
| AAGAGAACTGGTGATCTTTA+TGG | + | chr1_3:75939543-75939562 | Msa0141180:CDS | 35.0% | |
| !! | TTGATTTGAGTTTTGCTGCA+GGG | + | chr1_3:75939940-75939959 | Msa0141180:intron | 35.0% |
| TGACAATGCTTTCCATGATT+TGG | - | chr1_3:75940005-75940024 | None:intergenic | 35.0% | |
| !! | ATCATGGAAAGCATTGTCAA+AGG | + | chr1_3:75940006-75940025 | Msa0141180:CDS | 35.0% |
| ATGTAGACTACCCATTTGTT+GGG | + | chr1_3:75940040-75940059 | Msa0141180:CDS | 35.0% | |
| GAAAGTGATTCCCAACAAAT+GGG | - | chr1_3:75940053-75940072 | None:intergenic | 35.0% | |
| TGAAAGTGATTCCCAACAAA+TGG | - | chr1_3:75940054-75940073 | None:intergenic | 35.0% | |
| ATGTAGTGGCATCACAAATT+TGG | - | chr1_3:75940175-75940194 | None:intergenic | 35.0% | |
| ATGAAGATAATTACGTCCTG+GGG | - | chr1_3:75940286-75940305 | None:intergenic | 35.0% | |
| CAATGAAGATAATTACGTCC+TGG | - | chr1_3:75940288-75940307 | None:intergenic | 35.0% | |
| CTACAAAATGCCAGTAATAC+AGG | + | chr1_3:75940346-75940365 | Msa0141180:CDS | 35.0% | |
| CAAGAAATGGTAAAATGGCA+TGG | + | chr1_3:75940669-75940688 | Msa0141180:intron | 35.0% | |
| GTTAGTCATTGTCATTGTCA+TGG | + | chr1_3:75940844-75940863 | Msa0141180:intron | 35.0% | |
| TCATTGTCATTGTCATGGTT+TGG | + | chr1_3:75940849-75940868 | Msa0141180:intron | 35.0% | |
| CATTGTCATTGTCATGGTTT+GGG | + | chr1_3:75940850-75940869 | Msa0141180:intron | 35.0% | |
| GTTTGGGCGATAAAGTTTAT+TGG | + | chr1_3:75940866-75940885 | Msa0141180:intron | 35.0% | |
| !!! | GGTTTACTTTTTGAACTTGC+AGG | + | chr1_3:75941028-75941047 | Msa0141180:intron | 35.0% |
| ! | TTTGAACTTGCAGGTTTTTC+AGG | + | chr1_3:75941037-75941056 | Msa0141180:intron | 35.0% |
| ! | TTGAACTTGCAGGTTTTTCA+GGG | + | chr1_3:75941038-75941057 | Msa0141180:intron | 35.0% |
| GGATATACTTCAAACAACAG+AGG | - | chr1_3:75941100-75941119 | None:intergenic | 35.0% | |
| ! | CTGTTGTTTGAAGTATATCC+TGG | + | chr1_3:75941100-75941119 | Msa0141180:exon | 35.0% |
| ! | ATAGTTTTTACGACAGCTTC+AGG | + | chr1_3:75941153-75941172 | Msa0141180:three_prime_UTR | 35.0% |
| !!! | AGGCTGGGAATTTTAGTTTT+GGG | + | chr1_3:75941173-75941192 | Msa0141180:three_prime_UTR | 35.0% |
| CACCAACCATTGATCAATTT+AGG | + | chr1_3:75941287-75941306 | Msa0141180:three_prime_UTR | 35.0% | |
| CACCTAAATTGATCAATGGT+TGG | - | chr1_3:75941292-75941311 | None:intergenic | 35.0% | |
| ATAGTGCACACAAAGCATAT+AGG | + | chr1_3:75941390-75941409 | Msa0141180:three_prime_UTR | 35.0% | |
| GGTACAATGAAAGAAACCTT+TGG | + | chr1_3:75941411-75941430 | Msa0141180:three_prime_UTR | 35.0% | |
| ! | CTAGATTAGCCAAAAGATGA+TGG | - | chr1_3:75941451-75941470 | None:intergenic | 35.0% |
| !! | CTTTTGGCTAATCTAGTATC+AGG | + | chr1_3:75941455-75941474 | Msa0141180:three_prime_UTR | 35.0% |
| !!! | GTATCAGGTTTTATTGACAC+TGG | + | chr1_3:75941470-75941489 | Msa0141180:three_prime_UTR | 35.0% |
| TGAAGCAGTGAATCTACAAA+TGG | - | chr1_3:75941554-75941573 | None:intergenic | 35.0% | |
| AAGTGTAAAACGGTGCGTTA+AGG | + | chr1_3:75934419-75934438 | Msa0141180:five_prime_UTR | 40.0% | |
| AGAAGAAGGTTTCAGAGTTG+AGG | - | chr1_3:75934499-75934518 | None:intergenic | 40.0% | |
| CGAGAAGAAGAAGAAGAAGA+AGG | - | chr1_3:75934513-75934532 | None:intergenic | 40.0% | |
| !! | TTCCTCATCGATTCACAAGA+TGG | + | chr1_3:75934556-75934575 | Msa0141180:exon | 40.0% |
| CGCATCTTACAAGACATATC+TGG | + | chr1_3:75934611-75934630 | Msa0141180:CDS | 40.0% | |
| ACAAGACATATCTGGCATGA+AGG | + | chr1_3:75934619-75934638 | Msa0141180:CDS | 40.0% | |
| TCTCATCCTCGATTCTCAAA+CGG | + | chr1_3:75934643-75934662 | Msa0141180:CDS | 40.0% | |
| GAGTAAATTGTAATTGGGGG+TGG | + | chr1_3:75934760-75934779 | Msa0141180:intron | 40.0% | |
| ATTCAAGCTGGTGGTTGAAA+TGG | + | chr1_3:75934873-75934892 | Msa0141180:intron | 40.0% | |
| TTCAAGCTGGTGGTTGAAAT+GGG | + | chr1_3:75934874-75934893 | Msa0141180:intron | 40.0% | |
| TGTTGTATGAGACAGAGTGT+TGG | + | chr1_3:75934956-75934975 | Msa0141180:intron | 40.0% | |
| ! | GTTGTATGAGACAGAGTGTT+GGG | + | chr1_3:75934957-75934976 | Msa0141180:intron | 40.0% |
| ! | AATTAAGTGTAGCGGAGATG+AGG | + | chr1_3:75935016-75935035 | Msa0141180:intron | 40.0% |
| ! | GGATGTTGCATTGATGTGAT+AGG | + | chr1_3:75935037-75935056 | Msa0141180:intron | 40.0% |
| ACTAAGTAGAGTATGCTGCA+AGG | - | chr1_3:75935245-75935264 | None:intergenic | 40.0% | |
| TTGCAGCATACTCTACTTAG+TGG | + | chr1_3:75935244-75935263 | Msa0141180:intron | 40.0% | |
| TGCAGCATACTCTACTTAGT+GGG | + | chr1_3:75935245-75935264 | Msa0141180:intron | 40.0% | |
| GAAGAGGCCAAAATATTACG+AGG | + | chr1_3:75935551-75935570 | Msa0141180:intron | 40.0% | |
| GCTTGTAAAGCTATTACCTG+TGG | + | chr1_3:75935634-75935653 | Msa0141180:intron | 40.0% | |
| ATCTTGCCAATATAACCCAC+AGG | - | chr1_3:75935653-75935672 | None:intergenic | 40.0% | |
| GGCAAGATACCATTGTAACT+TGG | + | chr1_3:75935665-75935684 | Msa0141180:intron | 40.0% | |
| ! | TTTTTCCCTCGAATTTTCGC+AGG | + | chr1_3:75935738-75935757 | Msa0141180:intron | 40.0% |
| ACTTACCTGCGAAAATTCGA+GGG | - | chr1_3:75935746-75935765 | None:intergenic | 40.0% | |
| TACTTACCTGCGAAAATTCG+AGG | - | chr1_3:75935747-75935766 | None:intergenic | 40.0% | |
| ATTGCCTTGAGATGTGACAT+TGG | - | chr1_3:75935859-75935878 | None:intergenic | 40.0% | |
| TATTCTCTGATGTAGGTCGA+AGG | - | chr1_3:75935888-75935907 | None:intergenic | 40.0% | |
| AGGTGATATTCTCCGAATCT+AGG | - | chr1_3:75935940-75935959 | None:intergenic | 40.0% | |
| TCGGAGAATATCACCTATGT+AGG | + | chr1_3:75935944-75935963 | Msa0141180:intron | 40.0% | |
| CGGCAAGTAAGTGAATATGA+TGG | - | chr1_3:75936141-75936160 | None:intergenic | 40.0% | |
| AACTTCCTGTTCATCCGAAT+CGG | - | chr1_3:75936161-75936180 | None:intergenic | 40.0% | |
| AAGTTCAGGTAACTGCTCAT+GGG | + | chr1_3:75936188-75936207 | Msa0141180:intron | 40.0% | |
| GAGACGGAATATATAAGGGT+TGG | - | chr1_3:75936323-75936342 | None:intergenic | 40.0% | |
| TCCGTATTGTAGTAGGAGTT+TGG | + | chr1_3:75936440-75936459 | Msa0141180:intron | 40.0% | |
| GTATTGTAGTAGGAGTTTGG+TGG | + | chr1_3:75936443-75936462 | Msa0141180:intron | 40.0% | |
| TGAAACATGTTCCGGATAGA+AGG | + | chr1_3:75936612-75936631 | Msa0141180:intron | 40.0% | |
| GAAACATGTTCCGGATAGAA+GGG | + | chr1_3:75936613-75936632 | Msa0141180:intron | 40.0% | |
| ATAGTACTCCTGGATGATCA+GGG | - | chr1_3:75936806-75936825 | None:intergenic | 40.0% | |
| !!! | CATTTTAGCTACTTGGTCGA+TGG | + | chr1_3:75937106-75937125 | Msa0141180:intron | 40.0% |
| ACAGAAACTGATGTACCAAG+AGG | + | chr1_3:75937336-75937355 | Msa0141180:intron | 40.0% | |
| ! | GGAAGTTTCTCCTTTGTTGT+TGG | + | chr1_3:75937387-75937406 | Msa0141180:CDS | 40.0% |
| CTGTCAATCACCAACAACAA+AGG | - | chr1_3:75937400-75937419 | None:intergenic | 40.0% | |
| !! | CTTTGTTGTTGGTGATTGAC+AGG | + | chr1_3:75937398-75937417 | Msa0141180:CDS | 40.0% |
| TGATTTAGCAATGGGGTTAC+AGG | - | chr1_3:75937433-75937452 | None:intergenic | 40.0% | |
| !! | GGTCCATTGATTTAGCAATG+GGG | - | chr1_3:75937440-75937459 | None:intergenic | 40.0% |
| GCTAAATCAATGGACCTATC+AGG | + | chr1_3:75937444-75937463 | Msa0141180:CDS | 40.0% | |
| AGGAATCCAAGACAACAAAG+TGG | + | chr1_3:75937601-75937620 | Msa0141180:CDS | 40.0% | |
| AAAGTGGACGTCAAATCCAT+TGG | + | chr1_3:75937617-75937636 | Msa0141180:CDS | 40.0% | |
| GTTGGATACATTTCTTGCAC+TGG | + | chr1_3:75937662-75937681 | Msa0141180:intron | 40.0% | |
| CATGATCTAACTCTTGGAAG+AGG | + | chr1_3:75938021-75938040 | Msa0141180:intron | 40.0% | |
| ! | CCATGCATTTTTCTGTACTC+AGG | - | chr1_3:75938073-75938092 | None:intergenic | 40.0% |
| CCTGAGTACAGAAAAATGCA+TGG | + | chr1_3:75938070-75938089 | Msa0141180:CDS | 40.0% | |
| ! | CTTGCTGTAGCAGCATTTAT+TGG | + | chr1_3:75938510-75938529 | Msa0141180:intron | 40.0% |
| TGCTGTAGCAGCATTTATTG+GGG | + | chr1_3:75938512-75938531 | Msa0141180:intron | 40.0% | |
| GAAACTCTACATTGTTCCCT+AGG | + | chr1_3:75938646-75938665 | Msa0141180:intron | 40.0% | |
| ! | TTGCATTTTTCCATGTCGGT+TGG | - | chr1_3:75938911-75938930 | None:intergenic | 40.0% |
| GTCTCTATGCACTCATTTAC+AGG | + | chr1_3:75939028-75939047 | Msa0141180:intron | 40.0% | |
| TCTATGCACTCATTTACAGG+CGG | + | chr1_3:75939031-75939050 | Msa0141180:intron | 40.0% | |
| AGATATGGACAGACTACGTT+TGG | + | chr1_3:75939085-75939104 | Msa0141180:CDS | 40.0% | |
| AGGTTTGTATTTGGCAGATC+TGG | - | chr1_3:75939183-75939202 | None:intergenic | 40.0% | |
| AGATCTGCCAAATACAAACC+TGG | + | chr1_3:75939182-75939201 | Msa0141180:CDS | 40.0% | |
| GATCTGCCAAATACAAACCT+GGG | + | chr1_3:75939183-75939202 | Msa0141180:CDS | 40.0% | |
| ATCTGCCAAATACAAACCTG+GGG | + | chr1_3:75939184-75939203 | Msa0141180:CDS | 40.0% | |
| CCCCCACTACTATTTATCTA+AGG | - | chr1_3:75939308-75939327 | None:intergenic | 40.0% | |
| !!! | TGTCCAGTTTCTTTTGAAGC+AGG | + | chr1_3:75939509-75939528 | Msa0141180:CDS | 40.0% |
| AATGAACATTGCGCGTAACA+TGG | + | chr1_3:75939578-75939597 | Msa0141180:CDS | 40.0% | |
| ! | GCACTTTTAGTCCCATGTAA+GGG | - | chr1_3:75939752-75939771 | None:intergenic | 40.0% |
| ! | TGCACTTTTAGTCCCATGTA+AGG | - | chr1_3:75939753-75939772 | None:intergenic | 40.0% |
| TCAAGCATATGATGCTACAG+TGG | - | chr1_3:75939893-75939912 | None:intergenic | 40.0% | |
| !! | CTTGATTTGAGTTTTGCTGC+AGG | + | chr1_3:75939939-75939958 | Msa0141180:intron | 40.0% |
| ! | TCCATGATTTGGAACAGAAG+CGG | - | chr1_3:75939994-75940013 | None:intergenic | 40.0% |
| !! | TGGAAAGCATTGTCAAAGGA+CGG | + | chr1_3:75940010-75940029 | Msa0141180:CDS | 40.0% |
| GATGTAGACTACCCATTTGT+TGG | + | chr1_3:75940039-75940058 | Msa0141180:CDS | 40.0% | |
| GTTGGGAATCACTTTCAACA+AGG | + | chr1_3:75940057-75940076 | Msa0141180:CDS | 40.0% | |
| GGAATCACTTTCAACAAGGA+AGG | + | chr1_3:75940061-75940080 | Msa0141180:CDS | 40.0% | |
| AGAAACAGGCAACAATGTAG+TGG | - | chr1_3:75940189-75940208 | None:intergenic | 40.0% | |
| CTGGTGACTGTATAAAAACC+AGG | + | chr1_3:75940260-75940279 | Msa0141180:intron | 40.0% | |
| GGACAACATATGAAGAGTCA+CGG | + | chr1_3:75940314-75940333 | Msa0141180:CDS | 40.0% | |
| GGCGATAAAGTTTATTGGGT+AGG | + | chr1_3:75940871-75940890 | Msa0141180:intron | 40.0% | |
| ATCCAACATTTGCTTTGCAC+AGG | + | chr1_3:75940980-75940999 | Msa0141180:intron | 40.0% | |
| TACCTGTGCAAAGCAAATGT+TGG | - | chr1_3:75940985-75941004 | None:intergenic | 40.0% | |
| CACATGATGCAAAATATGCC+AGG | - | chr1_3:75941121-75941140 | None:intergenic | 40.0% | |
| ! | CTGGCATATTTTGCATCATG+TGG | + | chr1_3:75941119-75941138 | Msa0141180:three_prime_UTR | 40.0% |
| !!! | CAGGCTGGGAATTTTAGTTT+TGG | + | chr1_3:75941172-75941191 | Msa0141180:three_prime_UTR | 40.0% |
| TTGAATCGCACTCAATTGCA+AGG | - | chr1_3:75941325-75941344 | None:intergenic | 40.0% | |
| !! | CCAAAAGATGATGGAAGACT+TGG | - | chr1_3:75941442-75941461 | None:intergenic | 40.0% |
| ! | CCAAGTCTTCCATCATCTTT+TGG | + | chr1_3:75941439-75941458 | Msa0141180:three_prime_UTR | 40.0% |
| CATCTTTACAAGACAATCCC+AGG | - | chr1_3:75941671-75941690 | None:intergenic | 40.0% | |
| ATCGTACCGTTTGAGAATCG+AGG | - | chr1_3:75934652-75934671 | None:intergenic | 45.0% | |
| TCAAGCTGGTGGTTGAAATG+GGG | + | chr1_3:75934875-75934894 | Msa0141180:intron | 45.0% | |
| TTGAAATGGGGGATGACCTT+GGG | + | chr1_3:75934887-75934906 | Msa0141180:intron | 45.0% | |
| TAACGCTCAAGCTGAAAGAC+CGG | + | chr1_3:75934930-75934949 | Msa0141180:intron | 45.0% | |
| TCTGTCTCATACAACATCGC+CGG | - | chr1_3:75934952-75934971 | None:intergenic | 45.0% | |
| TTTCGACAATGGATGGCAAG+AGG | + | chr1_3:75935409-75935428 | Msa0141180:intron | 45.0% | |
| CAGGTACCACCAAGTTACAA+TGG | - | chr1_3:75935677-75935696 | None:intergenic | 45.0% | |
| ! | CATTGTAACTTGGTGGTACC+TGG | + | chr1_3:75935675-75935694 | Msa0141180:intron | 45.0% |
| !! | TGACATTGGTTCGCTTGACT+TGG | - | chr1_3:75935845-75935864 | None:intergenic | 45.0% |
| CGAACCAATGTCACATCTCA+AGG | + | chr1_3:75935852-75935871 | Msa0141180:CDS | 45.0% | |
| CAAGTTCAGGTAACTGCTCA+TGG | + | chr1_3:75936187-75936206 | Msa0141180:intron | 45.0% | |
| AGTTCAGGTAACTGCTCATG+GGG | + | chr1_3:75936189-75936208 | Msa0141180:intron | 45.0% | |
| CACTGTTGAGCTTGAAGCTT+TGG | + | chr1_3:75936707-75936726 | Msa0141180:intron | 45.0% | |
| GATTGCAACACAAAGGGTAG+AGG | - | chr1_3:75936734-75936753 | None:intergenic | 45.0% | |
| ! | ATTTGTTGCCCTGATCATCC+AGG | + | chr1_3:75936795-75936814 | Msa0141180:intron | 45.0% |
| CATAGTACTCCTGGATGATC+AGG | - | chr1_3:75936807-75936826 | None:intergenic | 45.0% | |
| CAAAGTCTGCATAGTACTCC+TGG | - | chr1_3:75936816-75936835 | None:intergenic | 45.0% | |
| CATTGCAGCGTTTCAGTGAT+CGG | + | chr1_3:75936917-75936936 | Msa0141180:CDS | 45.0% | |
| ATTGCAGCGTTTCAGTGATC+GGG | + | chr1_3:75936918-75936937 | Msa0141180:CDS | 45.0% | |
| ! | TTCAGTGATCGGGTTGTTGA+AGG | + | chr1_3:75936928-75936947 | Msa0141180:CDS | 45.0% |
| CTGATGTACCAAGAGGAAAG+TGG | + | chr1_3:75937343-75937362 | Msa0141180:CDS | 45.0% | |
| CGAAAAGACCACTTTCCTCT+TGG | - | chr1_3:75937354-75937373 | None:intergenic | 45.0% | |
| !! | TGTTGTTGGTGATTGACAGG+AGG | + | chr1_3:75937401-75937420 | Msa0141180:CDS | 45.0% |
| !! | GTTGTTGGTGATTGACAGGA+GGG | + | chr1_3:75937402-75937421 | Msa0141180:CDS | 45.0% |
| ! | TGACGTCCACTTTGTTGTCT+TGG | - | chr1_3:75937610-75937629 | None:intergenic | 45.0% |
| TTTCCAAAGGATCAGGAGGT+TGG | + | chr1_3:75937644-75937663 | Msa0141180:intron | 45.0% | |
| TATCCAACCTCCTGATCCTT+TGG | - | chr1_3:75937650-75937669 | None:intergenic | 45.0% | |
| CTAACTCTTGGAAGAGGACA+TGG | + | chr1_3:75938027-75938046 | Msa0141180:intron | 45.0% | |
| !! | GAACAAGAGTTGGCTTGCAA+TGG | + | chr1_3:75938175-75938194 | Msa0141180:CDS | 45.0% |
| !! | AAGAGTTGGCTTGCAATGGA+GGG | + | chr1_3:75938179-75938198 | Msa0141180:CDS | 45.0% |
| TGTAGCAGCATTTATTGGGG+TGG | + | chr1_3:75938515-75938534 | Msa0141180:intron | 45.0% | |
| GCATTTATTGGGGTGGTTCT+AGG | + | chr1_3:75938522-75938541 | Msa0141180:intron | 45.0% | |
| CAGCCTGCTTCAAAAGAAAC+TGG | - | chr1_3:75939515-75939534 | None:intergenic | 45.0% | |
| !!! | CAGTTTCTTTTGAAGCAGGC+TGG | + | chr1_3:75939513-75939532 | Msa0141180:CDS | 45.0% |
| !!! | GTATGTTTTTGGTCCCTCAC+TGG | + | chr1_3:75939725-75939744 | Msa0141180:intron | 45.0% |
| ATGCCAGTAATACAGGCGTT+CGG | + | chr1_3:75940353-75940372 | Msa0141180:CDS | 45.0% | |
| AAACCGAACGCCTGTATTAC+TGG | - | chr1_3:75940359-75940378 | None:intergenic | 45.0% | |
| ACAGGCGTTCGGTTTATACT+TGG | + | chr1_3:75940364-75940383 | Msa0141180:CDS | 45.0% | |
| TCATGGTATGGGCTTACTAG+AGG | + | chr1_3:75940561-75940580 | Msa0141180:intron | 45.0% | |
| GCTGCTAAACTAATCAACCC+AGG | - | chr1_3:75940954-75940973 | None:intergenic | 45.0% | |
| ! | GCTTTGCACAGGTAGCATTT+TGG | + | chr1_3:75940991-75941010 | Msa0141180:intron | 45.0% |
| !!! | TTGCAGGTTTTTCAGGGACT+TGG | + | chr1_3:75941044-75941063 | Msa0141180:intron | 45.0% |
| ! | TTTTTACGACAGCTTCAGGC+TGG | + | chr1_3:75941157-75941176 | Msa0141180:three_prime_UTR | 45.0% |
| ! | TTTTACGACAGCTTCAGGCT+GGG | + | chr1_3:75941158-75941177 | Msa0141180:three_prime_UTR | 45.0% |
| CTGCTAAAGGAGTTCGATGT+TGG | + | chr1_3:75941221-75941240 | Msa0141180:three_prime_UTR | 45.0% | |
| GGAAGACTTGGCAAATCCAA+AGG | - | chr1_3:75941430-75941449 | None:intergenic | 45.0% | |
| AAGCACAGTTGCAACGTTGA+TGG | + | chr1_3:75941628-75941647 | Msa0141180:three_prime_UTR | 45.0% | |
| !! | TATTATTATTATTAATATAG+TGG | + | chr1_3:75936473-75936492 | Msa0141180:intron | 5.0% |
| !!! | ATTTTTCAAAAAATTTAAAA+AGG | - | chr1_3:75940759-75940778 | None:intergenic | 5.0% |
| CGCCATCTTGTGAATCGATG+AGG | - | chr1_3:75934561-75934580 | None:intergenic | 50.0% | |
| CAAGCTGGTGGTTGAAATGG+GGG | + | chr1_3:75934876-75934895 | Msa0141180:intron | 50.0% | |
| GTTGAAATGGGGGATGACCT+TGG | + | chr1_3:75934886-75934905 | Msa0141180:intron | 50.0% | |
| AATGGATGGCAAGAGGTTGC+AGG | + | chr1_3:75935416-75935435 | Msa0141180:intron | 50.0% | |
| ! | CAGCTGGCTAGTCCTAGATT+CGG | + | chr1_3:75935925-75935944 | Msa0141180:CDS | 50.0% |
| !! | ACTTGCCGATTCGGATGAAC+AGG | + | chr1_3:75936153-75936172 | Msa0141180:CDS | 50.0% |
| GGAAGTTGTCCAGCAAGTTC+AGG | + | chr1_3:75936174-75936193 | Msa0141180:CDS | 50.0% | |
| GAGCAGTTACCTGAACTTGC+TGG | - | chr1_3:75936186-75936205 | None:intergenic | 50.0% | |
| CTGAAGGATCTACGACAGCT+GGG | - | chr1_3:75936897-75936916 | None:intergenic | 50.0% | |
| CTGAAACGCTGCAATGCTGA+AGG | - | chr1_3:75936913-75936932 | None:intergenic | 50.0% | |
| GCAGGAGGTTGTTCTGTCAT+CGG | + | chr1_3:75937758-75937777 | Msa0141180:intron | 50.0% | |
| !! | CAAGAGTTGGCTTGCAATGG+AGG | + | chr1_3:75938178-75938197 | Msa0141180:CDS | 50.0% |
| ! | TTTTTCGCCTGCTCTGCACA+TGG | + | chr1_3:75938485-75938504 | Msa0141180:intron | 50.0% |
| !! | GCTGGTGTTGACAAGAGAAC+TGG | + | chr1_3:75939531-75939550 | Msa0141180:CDS | 50.0% |
| ! | TAACATGGCTCGTGGACTGA+AGG | + | chr1_3:75939593-75939612 | Msa0141180:CDS | 50.0% |
| ! | TGATTTGGAACAGAAGCGGC+TGG | - | chr1_3:75939990-75940009 | None:intergenic | 50.0% |
| GCCGCTTCTGTTCCAAATCA+TGG | + | chr1_3:75939990-75940009 | Msa0141180:CDS | 50.0% | |
| ! | GTGAACTTCTAGAGGTCTCG+TGG | + | chr1_3:75940126-75940145 | Msa0141180:intron | 50.0% |
| CTGTATAAAAACCAGGCCCC+AGG | + | chr1_3:75940267-75940286 | Msa0141180:intron | 50.0% | |
| GGCGTTCGGTTTATACTTGG+TGG | + | chr1_3:75940367-75940386 | Msa0141180:CDS | 50.0% | |
| GGACTTGGAAGAAGCTCAGA+GGG | + | chr1_3:75941059-75941078 | Msa0141180:CDS | 50.0% | |
| ATTCAAGAGCAAGCCACCCA+TGG | + | chr1_3:75941339-75941358 | Msa0141180:three_prime_UTR | 50.0% | |
| AAAAGAGAGGGACGAGCCAT+GGG | - | chr1_3:75941358-75941377 | None:intergenic | 50.0% | |
| AAAAAGAGAGGGACGAGCCA+TGG | - | chr1_3:75941359-75941378 | None:intergenic | 50.0% | |
| !! | CAGTTGCAACGTTGATGGCA+TGG | + | chr1_3:75941633-75941652 | Msa0141180:three_prime_UTR | 50.0% |
| CATGGCATTATGTGCTGCCT+GGG | + | chr1_3:75941651-75941670 | Msa0141180:three_prime_UTR | 50.0% | |
| AAGGTCTCGTTCGTCGTCCT+CGG | + | chr1_3:75934438-75934457 | Msa0141180:five_prime_UTR | 55.0% | |
| CCAGCTGACGACGCATATAC+TGG | - | chr1_3:75935912-75935931 | None:intergenic | 55.0% | |
| CCAGTATATGCGTCGTCAGC+TGG | + | chr1_3:75935909-75935928 | Msa0141180:CDS | 55.0% | |
| GCTGAAGGATCTACGACAGC+TGG | - | chr1_3:75936898-75936917 | None:intergenic | 55.0% | |
| !! | TTGGCTTGCAATGGAGGGCA+AGG | + | chr1_3:75938184-75938203 | Msa0141180:CDS | 55.0% |
| !!! | AGGGCAAGGAGCTGCTTTTG+AGG | + | chr1_3:75938198-75938217 | Msa0141180:CDS | 55.0% |
| GCAAGTACCATGTGCAGAGC+AGG | - | chr1_3:75938495-75938514 | None:intergenic | 55.0% | |
| ATTGCGCGTAACATGGCTCG+TGG | + | chr1_3:75939585-75939604 | Msa0141180:CDS | 55.0% | |
| TCCCTCACTGGACCCTTACA+TGG | + | chr1_3:75939737-75939756 | Msa0141180:intron | 55.0% | |
| CCCATGTAAGGGTCCAGTGA+GGG | - | chr1_3:75939741-75939760 | None:intergenic | 55.0% | |
| CCCTCACTGGACCCTTACAT+GGG | + | chr1_3:75939738-75939757 | Msa0141180:intron | 55.0% | |
| TCCCATGTAAGGGTCCAGTG+AGG | - | chr1_3:75939742-75939761 | None:intergenic | 55.0% | |
| GATAATTACGTCCTGGGGCC+TGG | - | chr1_3:75940281-75940300 | None:intergenic | 55.0% | |
| GGGACTTGGAAGAAGCTCAG+AGG | + | chr1_3:75941058-75941077 | Msa0141180:CDS | 55.0% | |
| GCATGGCATTATGTGCTGCC+TGG | + | chr1_3:75941650-75941669 | Msa0141180:three_prime_UTR | 55.0% | |
| GAACAGAAGCGGCTGGTGCT+GGG | - | chr1_3:75939983-75940002 | None:intergenic | 60.0% | |
| AGATCCACCACCAGCGACCG+AGG | - | chr1_3:75934458-75934477 | None:intergenic | 65.0% | |
| GGAACAGAAGCGGCTGGTGC+TGG | - | chr1_3:75939984-75940003 | None:intergenic | 65.0% | |
| AGAGAGGGACGAGCCATGGG+TGG | - | chr1_3:75941355-75941374 | None:intergenic | 65.0% | |
| CGTTCGTCGTCCTCGGTCGC+TGG | + | chr1_3:75934445-75934464 | Msa0141180:five_prime_UTR | 70.0% | |
| TCGTCGTCCTCGGTCGCTGG+TGG | + | chr1_3:75934448-75934467 | Msa0141180:five_prime_UTR | 70.0% | |
| TCGTCCTCGGTCGCTGGTGG+TGG | + | chr1_3:75934451-75934470 | Msa0141180:five_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 75934353 | 75941770 | 75934353 | ID=Msa0141180;Name=Msa0141180 |
| chr1_3 | mRNA | 75934353 | 75941770 | 75934353 | ID=Msa0141180-mRNA-1;Parent=Msa0141180;Name=Msa0141180-mRNA-1;_AED=0.09;_eAED=0.09;_QI=222|1|1|1|1|1|13|660|568 |
| chr1_3 | exon | 75934353 | 75934664 | 75934353 | ID=Msa0141180-mRNA-1:exon:26509;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75935760 | 75935961 | 75935760 | ID=Msa0141180-mRNA-1:exon:26510;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75936116 | 75936195 | 75936116 | ID=Msa0141180-mRNA-1:exon:26511;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75936817 | 75937044 | 75936817 | ID=Msa0141180-mRNA-1:exon:26512;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75937340 | 75937465 | 75937340 | ID=Msa0141180-mRNA-1:exon:26513;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75937581 | 75937661 | 75937581 | ID=Msa0141180-mRNA-1:exon:26514;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75937762 | 75937903 | 75937762 | ID=Msa0141180-mRNA-1:exon:26515;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75938041 | 75938219 | 75938041 | ID=Msa0141180-mRNA-1:exon:26516;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75939050 | 75939205 | 75939050 | ID=Msa0141180-mRNA-1:exon:26517;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75939507 | 75939614 | 75939507 | ID=Msa0141180-mRNA-1:exon:26518;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75939961 | 75940082 | 75939961 | ID=Msa0141180-mRNA-1:exon:26519;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75940282 | 75940413 | 75940282 | ID=Msa0141180-mRNA-1:exon:26520;Parent=Msa0141180-mRNA-1 |
| chr1_3 | exon | 75941050 | 75941770 | 75941050 | ID=Msa0141180-mRNA-1:exon:26521;Parent=Msa0141180-mRNA-1 |
| chr1_3 | five_prime_UTR | 75934353 | 75934574 | 75934353 | ID=Msa0141180-mRNA-1:five_prime_utr;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75934575 | 75934664 | 75934575 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75935760 | 75935961 | 75935760 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75936116 | 75936195 | 75936116 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75936817 | 75937044 | 75936817 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75937340 | 75937465 | 75937340 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75937581 | 75937661 | 75937581 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75937762 | 75937903 | 75937762 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75938041 | 75938219 | 75938041 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75939050 | 75939205 | 75939050 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75939507 | 75939614 | 75939507 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75939961 | 75940082 | 75939961 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75940282 | 75940413 | 75940282 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | CDS | 75941050 | 75941110 | 75941050 | ID=Msa0141180-mRNA-1:cds;Parent=Msa0141180-mRNA-1 |
| chr1_3 | three_prime_UTR | 75941111 | 75941770 | 75941111 | ID=Msa0141180-mRNA-1:three_prime_utr;Parent=Msa0141180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
