AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0375710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0375710 MtrunA17_Chr3g0126071 99.472 568 2 1 1 568 1 567 0.0 1158
Msa0375710 MtrunA17_Chr4g0056851 23.404 517 346 17 19 499 146 648 4.65e-25 110
Msa0375710 MtrunA17_Chr4g0051171 23.614 559 351 21 22 525 39 576 8.96e-24 105
Msa0375710 MtrunA17_Chr5g0398701 23.776 429 281 13 19 414 43 458 1.69e-22 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0375710 AT1G77140.1 84.359 569 88 1 1 568 1 569 0.0 997
Msa0375710 AT1G02010.3 24.405 504 343 16 17 494 41 532 1.49e-32 132
Msa0375710 AT1G02010.2 24.206 504 344 16 17 494 41 532 1.94e-32 132
Msa0375710 AT1G02010.5 24.405 504 343 16 17 494 9 500 2.12e-32 132
Msa0375710 AT1G02010.1 24.206 504 344 16 17 494 41 532 2.74e-32 132
Msa0375710 AT1G02010.4 23.738 535 338 19 17 494 41 562 1.65e-31 130
Msa0375710 AT4G12120.1 23.397 624 370 20 22 556 44 648 2.68e-30 126
Msa0375710 AT1G12360.1 24.277 519 338 16 19 499 41 542 8.57e-30 124
Msa0375710 AT2G17980.1 24.833 600 355 23 22 554 35 605 5.63e-25 109
Msa0375710 AT1G02010.6 24.784 347 230 12 170 494 46 383 2.10e-22 101

Find 153 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTCTTCACCGAATAAATT+TGG 0.154667 3_1:-75489838 Msa0375710:three_prime_UTR
CCAAGTCTTCCATCATCTTT+TGG 0.221604 3_1:-75490119 Msa0375710:three_prime_UTR
AAGAGAACTGGTGATCTTTA+TGG 0.249179 3_1:-75492007 Msa0375710:CDS
TGACAATGCTTTCCATGATT+TGG 0.250559 3_1:+75491548 None:intergenic
TGATTTAGCAATGGGGTTAC+AGG 0.252751 3_1:+75494147 None:intergenic
ACCAAACCATTGATCAATTT+AGG 0.268216 3_1:-75490271 Msa0375710:three_prime_UTR
ATTTACCCCAGGTTTGTATT+TGG 0.273417 3_1:+75492361 None:intergenic
ATACATGTTAGCTTTGAAAA+AGG 0.276081 3_1:+75493789 None:intergenic
AAACCGAACGCCTGTATTAC+TGG 0.282191 3_1:+75491197 None:intergenic
AGGGTAGTTGTCAACAAATT+TGG 0.318368 3_1:+75493529 None:intergenic
GTTCTTTGATATCTAATAAC+TGG 0.324443 3_1:+75494597 None:intergenic
TATGAGAATTTCGGAGATAT+TGG 0.329104 3_1:-75493769 Msa0375710:CDS
GCTAACATGTATGAGAATTT+CGG 0.350102 3_1:-75493778 Msa0375710:CDS
AAAAGCTGCATTAATTGAAC+AGG 0.355320 3_1:+75492407 None:intergenic
AAATAACACCCAAATTTATT+CGG 0.360837 3_1:+75489829 None:intergenic
CCAGCTGACGACGCATATAC+TGG 0.362544 3_1:+75495674 None:intergenic
CAGCCTGCTTCAAAAGAAAC+TGG 0.370290 3_1:+75492038 None:intergenic
ACCTAAATTGATCAATGGTT+TGG 0.370644 3_1:+75490270 None:intergenic
TATCCAACCTCCTGATCCTT+TGG 0.374257 3_1:+75493932 None:intergenic
TGAAAGTGATTCCCAACAAA+TGG 0.376536 3_1:+75491499 None:intergenic
AGGTTTGTATTTGGCAGATC+TGG 0.379649 3_1:+75492370 None:intergenic
GACGTAATTATCTTCATTGT+TGG 0.380475 3_1:-75491264 Msa0375710:CDS
CAATGAAAGCATATCAGATA+TGG 0.385298 3_1:-75492480 Msa0375710:CDS
TATTCACTTACTTGCCGATT+CGG 0.392826 3_1:-75495439 Msa0375710:CDS
TGTCTTCACCGAATAAATTT+GGG 0.394617 3_1:-75489837 Msa0375710:three_prime_UTR
GCTAAATCAATGGACCTATC+AGG 0.396844 3_1:-75494133 Msa0375710:intron
AGGTCCATTGATTTAGCAAT+GGG 0.398442 3_1:+75494139 None:intergenic
GATGTAGACTACCCATTTGT+TGG 0.398592 3_1:-75491511 Msa0375710:CDS
AAAAGTACAAACCTACTGTT+TGG 0.401418 3_1:+75493686 None:intergenic
TGACGTCCACTTTGTTGTCT+TGG 0.402333 3_1:+75493972 None:intergenic
CATTGCAGCGTTTCAGTGAT+CGG 0.405105 3_1:-75494665 Msa0375710:CDS
TGATCAATTTAGGTGCTAAT+CGG 0.410119 3_1:-75490261 Msa0375710:three_prime_UTR
CGCATCTTACAAGACATATC+TGG 0.410624 3_1:-75496981 Msa0375710:CDS
GGAACAGAAGCGGCTGGTGC+TGG 0.415969 3_1:+75491569 None:intergenic
CTTTGTTGTTGGTGATTGAC+AGG 0.418863 3_1:-75494179 Msa0375710:CDS
GGAAGTTGTCCAGCAAGTTC+AGG 0.420425 3_1:-75495409 Msa0375710:intron
TTCAGTGATCGGGTTGTTGA+AGG 0.423672 3_1:-75494654 Msa0375710:CDS
CTGTTGTTTGAAGTATATCC+TGG 0.425517 3_1:-75490459 Msa0375710:exon
GCCGCTTCTGTTCCAAATCA+TGG 0.426968 3_1:-75491560 Msa0375710:CDS
CGTTCGTCGTCCTCGGTCGC+TGG 0.429357 3_1:-75497144 Msa0375710:five_prime_UTR
TGGTAAATTTCCAAAGGATC+AGG 0.431077 3_1:-75493942 Msa0375710:CDS
GCATGGCATTATGTGCTGCC+TGG 0.431512 3_1:-75489908 Msa0375710:three_prime_UTR
TCGTCCTCGGTCGCTGGTGG+TGG 0.436828 3_1:-75497138 Msa0375710:five_prime_UTR
AGGTGATATTCTCCGAATCT+AGG 0.437587 3_1:+75495646 None:intergenic
CTACAAAATGCCAGTAATAC+AGG 0.437679 3_1:-75491207 Msa0375710:CDS
CTTCTGTTCTTAATTCGAAA+AGG 0.438619 3_1:-75491161 Msa0375710:intron
GAGCAGTTACCTGAACTTGC+TGG 0.439375 3_1:+75495400 None:intergenic
ACTTGCCGATTCGGATGAAC+AGG 0.442987 3_1:-75495430 Msa0375710:CDS
GGTACAATGAAAGAAACCTT+TGG 0.443823 3_1:-75490147 Msa0375710:three_prime_UTR
GGAAGTTTCTCCTTTGTTGT+TGG 0.444492 3_1:-75494190 Msa0375710:CDS
ATTGCAGCGTTTCAGTGATC+GGG 0.449810 3_1:-75494664 Msa0375710:CDS
TAATTTCACTGATACCTGAT+AGG 0.453387 3_1:+75494119 None:intergenic
GGCGTTCGGTTTATACTTGG+TGG 0.454629 3_1:-75491186 Msa0375710:CDS
CTGCTAAAGGAGTTCGATGT+TGG 0.456898 3_1:-75490338 Msa0375710:three_prime_UTR
GCTGAAGGATCTACGACAGC+TGG 0.458094 3_1:+75494687 None:intergenic
ATGTAGACTACCCATTTGTT+GGG 0.461033 3_1:-75491510 Msa0375710:CDS
TGACATTGGTTCGCTTGACT+TGG 0.461059 3_1:+75495741 None:intergenic
AGAAGAAGGTTTCAGAGTTG+AGG 0.462996 3_1:+75497093 None:intergenic
CGAAAAGACCACTTTCCTCT+TGG 0.465084 3_1:+75494226 None:intergenic
CCAAAAGATGATGGAAGACT+TGG 0.466156 3_1:+75490119 None:intergenic
TTAGCACCTAAATTGATCAA+TGG 0.468932 3_1:+75490265 None:intergenic
CCAGTATATGCGTCGTCAGC+TGG 0.470524 3_1:-75495674 Msa0375710:CDS
AAGGTCTCGTTCGTCGTCCT+CGG 0.470821 3_1:-75497151 Msa0375710:five_prime_UTR
AGATATGGACAGACTACGTT+TGG 0.477621 3_1:-75492465 Msa0375710:CDS
AACTTCCTGTTCATCCGAAT+CGG 0.481907 3_1:+75495425 None:intergenic
CAAGAGTTGGCTTGCAATGG+AGG 0.487233 3_1:-75493401 Msa0375710:CDS
TAACCCCATTGCTAAATCAA+TGG 0.491624 3_1:-75494143 Msa0375710:CDS
TGAAGCAGTGAATCTACAAA+TGG 0.498700 3_1:+75490007 None:intergenic
ACAGGCGTTCGGTTTATACT+TGG 0.500052 3_1:-75491189 Msa0375710:CDS
ATGTGGAAAGTGAAATGATA+AGG 0.501072 3_1:+75494735 None:intergenic
CATGGCATTATGTGCTGCCT+GGG 0.502158 3_1:-75489907 Msa0375710:three_prime_UTR
CTAGATTAGCCAAAAGATGA+TGG 0.502917 3_1:+75490110 None:intergenic
AAGTGTAAAACGGTGCGTTA+AGG 0.504173 3_1:-75497170 Msa0375710:five_prime_UTR
AGCATATAAATGTAGTTTGA+AGG 0.505144 3_1:+75494711 None:intergenic
GAACAGAAGCGGCTGGTGCT+GGG 0.506152 3_1:+75491570 None:intergenic
GCTATGGTTCATGAATTGAT+AGG 0.508083 3_1:-75493998 Msa0375710:CDS
GTAATTATCTTCATTGTTGG+CGG 0.510705 3_1:-75491261 Msa0375710:CDS
GAAAGTGATTCCCAACAAAT+GGG 0.512036 3_1:+75491500 None:intergenic
TTCACAAACAGAACAAGAGT+TGG 0.512486 3_1:-75493414 Msa0375710:CDS
ATGATGGTCCTTCAATATGT+TGG 0.514547 3_1:+75495461 None:intergenic
CAATGAAGATAATTACGTCC+TGG 0.515072 3_1:+75491268 None:intergenic
ATGCACAGTTGCAACGTTGA+TGG 0.517425 3_1:-75489930 Msa0375710:three_prime_UTR
TTCCTCATCGATTCACAAGA+TGG 0.517668 3_1:-75497036 Msa0375710:exon
CATCTTTACAAGACAATCCC+AGG 0.518622 3_1:+75489890 None:intergenic
GGAATCACTTTCAACAAGGA+AGG 0.521539 3_1:-75491489 Msa0375710:intron
AATGAAGATAATTACGTCCT+GGG 0.523085 3_1:+75491269 None:intergenic
TGTGACAAAACATGTGACTT+TGG 0.528147 3_1:-75493483 Msa0375710:CDS
ATGCCAGTAATACAGGCGTT+CGG 0.530073 3_1:-75491200 Msa0375710:CDS
ATCCTTTGGAAATTTACCAA+TGG 0.534360 3_1:+75493946 None:intergenic
TAATTATCTTCATTGTTGGC+GGG 0.538382 3_1:-75491260 Msa0375710:CDS
AGATCTGCCAAATACAAACC+TGG 0.542194 3_1:-75492368 Msa0375710:CDS
CAGCTGGCTAGTCCTAGATT+CGG 0.543786 3_1:-75495658 Msa0375710:CDS
GAACAAGAGTTGGCTTGCAA+TGG 0.545187 3_1:-75493404 Msa0375710:CDS
ATAGTGCACACAAAGCATAT+AGG 0.545662 3_1:-75490168 Msa0375710:three_prime_UTR
CTAACTCTTGGAAGAGGACA+TGG 0.547182 3_1:-75493552 Msa0375710:intron
AGAAGCAAAGAAGTGTAAAA+CGG 0.549023 3_1:-75497180 Msa0375710:five_prime_UTR
ATCCATTGGTAAATTTCCAA+AGG 0.552276 3_1:-75493948 Msa0375710:CDS
CACATGATGCAAAATATGCC+AGG 0.556225 3_1:+75490441 None:intergenic
TTGGCTTGCAATGGAGGGCA+AGG 0.558222 3_1:-75493395 Msa0375710:CDS
CTGAAACGCTGCAATGCTGA+AGG 0.561128 3_1:+75494672 None:intergenic
GGACTTGGAAGAAGCTCAGA+GGG 0.564191 3_1:-75490500 Msa0375710:CDS
AAAAGAGAGGGACGAGCCAT+GGG 0.565367 3_1:+75490203 None:intergenic
ACAAGACATATCTGGCATGA+AGG 0.566507 3_1:-75496973 Msa0375710:CDS
GCTGGTGTTGACAAGAGAAC+TGG 0.567007 3_1:-75492019 Msa0375710:CDS
CGAACCAATGTCACATCTCA+AGG 0.567079 3_1:-75495731 Msa0375710:CDS
TCTCATCCTCGATTCTCAAA+CGG 0.569444 3_1:-75496949 Msa0375710:intron
CTGAAGGATCTACGACAGCT+GGG 0.571034 3_1:+75494688 None:intergenic
TAGGTCCATTGATTTAGCAA+TGG 0.572413 3_1:+75494138 None:intergenic
AAATGTAGTTTGAAGGCATG+TGG 0.572855 3_1:+75494718 None:intergenic
AAAGTGGACGTCAAATCCAT+TGG 0.576391 3_1:-75493962 Msa0375710:CDS
GTTGTTGGTGATTGACAGGA+GGG 0.577111 3_1:-75494175 Msa0375710:CDS
TCCATGATTTGGAACAGAAG+CGG 0.577839 3_1:+75491559 None:intergenic
AATGAACATTGCGCGTAACA+TGG 0.578002 3_1:-75491972 Msa0375710:CDS
TGATTTGGAACAGAAGCGGC+TGG 0.579279 3_1:+75491563 None:intergenic
TGGTATGAATATCAAACGAC+TGG 0.579859 3_1:-75493749 Msa0375710:CDS
TCGTCGTCCTCGGTCGCTGG+TGG 0.580101 3_1:-75497141 Msa0375710:five_prime_UTR
GGAAGACTTGGCAAATCCAA+AGG 0.581297 3_1:+75490131 None:intergenic
GGTTGATGAATTTCAACAAG+TGG 0.581420 3_1:-75493728 Msa0375710:CDS
TAACATGGCTCGTGGACTGA+AGG 0.584097 3_1:-75491957 Msa0375710:intron
GATCTGCCAAATACAAACCT+GGG 0.586227 3_1:-75492367 Msa0375710:CDS
TTGAATCGCACTCAATTGCA+AGG 0.586661 3_1:+75490236 None:intergenic
ACAGGAGGTTGTTCTGTCAT+CGG 0.586739 3_1:-75493821 Msa0375710:intron
ATTCAAGAGCAAGCCACCCA+TGG 0.587329 3_1:-75490219 Msa0375710:three_prime_UTR
TGTTGTTGGTGATTGACAGG+AGG 0.601755 3_1:-75494176 Msa0375710:CDS
CAGTTGCAACGTTGATGGCA+TGG 0.603672 3_1:-75489925 Msa0375710:three_prime_UTR
ATATGCTTTACGATATGAGA+AGG 0.606299 3_1:-75492435 Msa0375710:CDS
TAAATTTCCAAAGGATCAGG+AGG 0.607951 3_1:-75493939 Msa0375710:intron
AGATCCACCACCAGCGACCG+AGG 0.611306 3_1:+75497134 None:intergenic
TACTGGATATTCTCTGATGT+AGG 0.612269 3_1:+75495691 None:intergenic
CGGCAAGTAAGTGAATATGA+TGG 0.614988 3_1:+75495445 None:intergenic
AAGAGTTGGCTTGCAATGGA+GGG 0.617235 3_1:-75493400 Msa0375710:CDS
AATCAGAACATCCAAACAGT+AGG 0.619362 3_1:-75493697 Msa0375710:intron
TGGAAAGCATTGTCAAAGGA+CGG 0.621542 3_1:-75491540 Msa0375710:CDS
AGAGAGGGACGAGCCATGGG+TGG 0.623028 3_1:+75490206 None:intergenic
ATTGCGCGTAACATGGCTCG+TGG 0.624579 3_1:-75491965 Msa0375710:CDS
ATCATGGAAAGCATTGTCAA+AGG 0.625157 3_1:-75491544 Msa0375710:CDS
CTGTCAATCACCAACAACAA+AGG 0.629632 3_1:+75494180 None:intergenic
ATCGTACCGTTTGAGAATCG+AGG 0.631514 3_1:+75496943 None:intergenic
TATTCTCTGATGTAGGTCGA+AGG 0.632119 3_1:+75495698 None:intergenic
CGCCATCTTGTGAATCGATG+AGG 0.633199 3_1:+75497034 None:intergenic
ATTGCCTTGAGATGTGACAT+TGG 0.633767 3_1:+75495727 None:intergenic
CTGATGTACCAAGAGGAAAG+TGG 0.644198 3_1:-75494234 Msa0375710:CDS
ATTGTCGTCTAGATCAACAA+TGG 0.653285 3_1:+75490295 None:intergenic
GTTGGGAATCACTTTCAACA+AGG 0.663736 3_1:-75491493 Msa0375710:CDS
GGACAACATATGAAGAGTCA+CGG 0.665146 3_1:-75491239 Msa0375710:CDS
ACAGAAACTGATGTACCAAG+AGG 0.673910 3_1:-75494241 Msa0375710:intron
AAAGCTGCATTAATTGAACA+GGG 0.678420 3_1:+75492408 None:intergenic
ATGAAGATAATTACGTCCTG+GGG 0.679958 3_1:+75491270 None:intergenic
AGGAATCCAAGACAACAAAG+TGG 0.684320 3_1:-75493978 Msa0375710:CDS
GGGACTTGGAAGAAGCTCAG+AGG 0.688488 3_1:-75490501 Msa0375710:CDS
ATCTGCCAAATACAAACCTG+GGG 0.695349 3_1:-75492366 Msa0375710:intron
GGTCCATTGATTTAGCAATG+GGG 0.723808 3_1:+75494140 None:intergenic
GGATATACTTCAAACAACAG+AGG 0.738656 3_1:+75490462 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATGTAACTAAAAAAATA+AGG - chr3_1:75489833-75489852 Msa0375710:three_prime_UTR 10.0%
!!! TTATTTTTGTCATTTAATTA+CGG - chr3_1:75491806-75491825 Msa0375710:intron 10.0%
!!! TTTTTTCATTTATGTTTCAA+AGG - chr3_1:75490951-75490970 Msa0375710:intron 15.0%
!!! TAAATAAATAAGGGTATTAT+AGG - chr3_1:75491963-75491982 Msa0375710:CDS 15.0%
!! CATTAAAAAATTATGCATAT+AGG - chr3_1:75492993-75493012 Msa0375710:intron 15.0%
!! ATCAAAATATTAATTTCCTA+GGG + chr3_1:75494131-75494150 None:intergenic 15.0%
!! AATCAAAATATTAATTTCCT+AGG + chr3_1:75494132-75494151 None:intergenic 15.0%
!! ATATATAACAACAATTAACA+GGG + chr3_1:75494410-75494429 None:intergenic 15.0%
!! TATATATAACAACAATTAAC+AGG + chr3_1:75494411-75494430 None:intergenic 15.0%
!!! TTAATTGTTGTTATATATAC+TGG - chr3_1:75494412-75494431 Msa0375710:intron 15.0%
!!! GCTTTTTATCTTTATAATAT+TGG - chr3_1:75495130-75495149 Msa0375710:intron 15.0%
!!! TAAGAAAAATAGTATGTTTT+TGG - chr3_1:75495209-75495228 Msa0375710:intron 15.0%
!! TTCTATGATAATAATAAACA+TGG + chr3_1:75495707-75495726 None:intergenic 15.0%
!!! GCAATAATGATTTTTATTTT+TGG - chr3_1:75495994-75496013 Msa0375710:intron 15.0%
!! AAATAACTAAGAACTTATTT+GGG + chr3_1:75496301-75496320 None:intergenic 15.0%
!! AAAATAACTAAGAACTTATT+TGG + chr3_1:75496302-75496321 None:intergenic 15.0%
!!! TTTTCTTTATACATATACAT+AGG + chr3_1:75496685-75496704 None:intergenic 15.0%
!! ATTGTGAATGAAAAATTGAT+AGG + chr3_1:75490148-75490167 None:intergenic 20.0%
!!! AGTTTGAATTATGATTCTTT+TGG - chr3_1:75490185-75490204 Msa0375710:three_prime_UTR 20.0%
!!! GTTACTCTTATAATTTTTCT+AGG + chr3_1:75490628-75490647 None:intergenic 20.0%
!! ATTTATGTTTCAAAGGATTA+GGG - chr3_1:75490958-75490977 Msa0375710:intron 20.0%
!! CCTCTTCAAAAAAAAAAAAA+AGG + chr3_1:75491000-75491019 None:intergenic 20.0%
!!! CCTTTTTTTTTTTTTTGAAG+AGG - chr3_1:75490997-75491016 Msa0375710:intron 20.0%
!! CTAAATATTGCTAGTTATAA+TGG - chr3_1:75491039-75491058 Msa0375710:intron 20.0%
!! AATTACAAACTCAATTCATA+AGG + chr3_1:75491481-75491500 None:intergenic 20.0%
!! AAATGACAAAAATAATGAGA+CGG + chr3_1:75491801-75491820 None:intergenic 20.0%
!!! ATTATTTTGATACTATACAC+TGG + chr3_1:75492040-75492059 None:intergenic 20.0%
!!! CTGTTTTTTTGACATTAAAA+CGG - chr3_1:75492422-75492441 Msa0375710:CDS 20.0%
!!! AATCCAATCTATTTGTTATT+TGG - chr3_1:75492689-75492708 Msa0375710:intron 20.0%
!! CAATCATTAATGATATAAGA+TGG + chr3_1:75492740-75492759 None:intergenic 20.0%
!!! TTTTTACTAATTCTTATCAC+AGG - chr3_1:75493206-75493225 Msa0375710:intron 20.0%
!!! AAATATTTGAAATTCTCCTT+TGG - chr3_1:75493701-75493720 Msa0375710:CDS 20.0%
!! ATGTTTCTTAGTTTATTTGA+TGG + chr3_1:75493756-75493775 None:intergenic 20.0%
!! TGTAAATTTCAGAAATTAGA+CGG + chr3_1:75493831-75493850 None:intergenic 20.0%
!! AAAATATTGCAAAGCTTAAA+AGG + chr3_1:75493921-75493940 None:intergenic 20.0%
!! ATAACAGATTAACTACAATA+AGG + chr3_1:75494083-75494102 None:intergenic 20.0%
!! TTTACTCTTATACTTTGTTA+CGG + chr3_1:75494257-75494276 None:intergenic 20.0%
!! CTAATAACAGATATTATTCA+GGG + chr3_1:75494285-75494304 None:intergenic 20.0%
!! ACTAATAACAGATATTATTC+AGG + chr3_1:75494286-75494305 None:intergenic 20.0%
!!! ATAATTTGTTGTGTTAAACA+TGG + chr3_1:75494326-75494345 None:intergenic 20.0%
!! TAGGTTATAAAGTAGAAATT+TGG - chr3_1:75494866-75494885 Msa0375710:intron 20.0%
!!! TGCAAAGTTTTTGTATTTTT+AGG - chr3_1:75495264-75495283 Msa0375710:intron 20.0%
!!! GCAAAGTTTTTGTATTTTTA+GGG - chr3_1:75495265-75495284 Msa0375710:intron 20.0%
!!! AAAGGTATAAAAACTGTATA+GGG - chr3_1:75495293-75495312 Msa0375710:intron 20.0%
!! AATAATTCGATGATTGAATA+TGG + chr3_1:75495357-75495376 None:intergenic 20.0%
!! CAAATTTGGATATAAATCAT+TGG + chr3_1:75495656-75495675 None:intergenic 20.0%
!! TTATTATTATCATAGAACTG+TGG - chr3_1:75495710-75495729 Msa0375710:CDS 20.0%
!! CTCATAAAGATAATTTAGAT+TGG - chr3_1:75495916-75495935 Msa0375710:intron 20.0%
!!! ATTGACAAAAATTTTAGTCA+TGG - chr3_1:75496036-75496055 Msa0375710:intron 20.0%
!!! AAAAATTTTAGTCATGGTAT+GGG - chr3_1:75496042-75496061 Msa0375710:intron 20.0%
!! TTATACAAGAAATGGTAAAA+TGG - chr3_1:75496156-75496175 Msa0375710:intron 20.0%
!!! TTTGAAGTTTGTAAAAGAAA+TGG + chr3_1:75496203-75496222 None:intergenic 20.0%
!! TATAAAGAAAAAACTGCTAA+AGG - chr3_1:75496694-75496713 Msa0375710:intron 20.0%
!!! TTTTAGTATACAAAAGAATG+GGG + chr3_1:75497012-75497031 None:intergenic 20.0%
!!! CTTTTAGTATACAAAAGAAT+GGG + chr3_1:75497013-75497032 None:intergenic 20.0%
!!! TCTTTTAGTATACAAAAGAA+TGG + chr3_1:75497014-75497033 None:intergenic 20.0%
!!! ATAATTTTCAAGTTCAGATT+GGG - chr3_1:75497060-75497079 Msa0375710:five_prime_UTR 20.0%
!! AAATAACACCCAAATTTATT+CGG + chr3_1:75497219-75497238 None:intergenic 20.0%
!!! GGGTGTTATTTTTTTTTTTA+AGG - chr3_1:75497228-75497247 Msa0375710:five_prime_UTR 20.0%
! ATCACGAGTAAATTGTAATT+GGG - chr3_1:75490208-75490227 Msa0375710:three_prime_UTR 25.0%
! TGTTTAAACTATGTAACTTG+TGG + chr3_1:75490327-75490346 None:intergenic 25.0%
! TTTAAACATCAAATTCAAGC+TGG - chr3_1:75490339-75490358 Msa0375710:three_prime_UTR 25.0%
! TTATGTGATATGAAAGTAAC+CGG - chr3_1:75490398-75490417 Msa0375710:three_prime_UTR 25.0%
!!! CACTTAATTTATTTTCGTGT+TGG + chr3_1:75490468-75490487 None:intergenic 25.0%
! CGAAAATAAATTAAGTGTAG+CGG - chr3_1:75490471-75490490 Msa0375710:CDS 25.0%
! AGATCTAGATATTAATGAGT+TGG - chr3_1:75490657-75490676 Msa0375710:intron 25.0%
! TAAGATTTGGATGTTGTTAT+TGG - chr3_1:75490732-75490751 Msa0375710:intron 25.0%
!! AAGATTTGGATGTTGTTATT+GGG - chr3_1:75490733-75490752 Msa0375710:intron 25.0%
! AGTAAATTATCATTGTGAGT+AGG - chr3_1:75490761-75490780 Msa0375710:intron 25.0%
!! TTTTAAACTACTGTACAGTA+TGG - chr3_1:75490902-75490921 Msa0375710:intron 25.0%
! CATTTATGTTTCAAAGGATT+AGG - chr3_1:75490957-75490976 Msa0375710:intron 25.0%
!!! TACCTGGATTATTTGATTTT+TGG - chr3_1:75491153-75491172 Msa0375710:intron 25.0%
!!! AGAAGTATTTTTAGTAGAGT+TGG - chr3_1:75491269-75491288 Msa0375710:CDS 25.0%
! AACAATTAAAGAACCTACAT+AGG + chr3_1:75491422-75491441 None:intergenic 25.0%
! AGAAAACTGTAATTTCAGAA+TGG + chr3_1:75491564-75491583 None:intergenic 25.0%
!! TTTAAAGTTTGTAGTCTGTA+TGG - chr3_1:75491687-75491706 Msa0375710:intron 25.0%
! TAATGAGACGGAATATATAA+GGG + chr3_1:75491789-75491808 None:intergenic 25.0%
! ATAATGAGACGGAATATATA+AGG + chr3_1:75491790-75491809 None:intergenic 25.0%
! AGTGGAGATGTAAATAAATA+AGG - chr3_1:75491953-75491972 Msa0375710:intron 25.0%
! GTGGAGATGTAAATAAATAA+GGG - chr3_1:75491954-75491973 Msa0375710:intron 25.0%
! TCATTTATCAGATAAAGAAC+CGG + chr3_1:75492142-75492161 None:intergenic 25.0%
! AGCATATAAATGTAGTTTGA+AGG + chr3_1:75492337-75492356 None:intergenic 25.0%
! GTTCTTTGATATCTAATAAC+TGG + chr3_1:75492451-75492470 None:intergenic 25.0%
! TTATACTTCGATCATTTCTA+TGG - chr3_1:75492611-75492630 Msa0375710:intron 25.0%
! TATATCATTAATGATTGTGC+TGG - chr3_1:75492743-75492762 Msa0375710:intron 25.0%
!!! TTTGTGGTGTTATATTTTAC+AGG - chr3_1:75493025-75493044 Msa0375710:intron 25.0%
!!! ATACATGTTAGCTTTGAAAA+AGG + chr3_1:75493259-75493278 None:intergenic 25.0%
!!! TTAGTTCTTTCTTTTTGATG+CGG - chr3_1:75494183-75494202 Msa0375710:CDS 25.0%
! ATTTCCAACAATATGAGTTA+AGG - chr3_1:75494223-75494242 Msa0375710:CDS 25.0%
! AATTCATGCGTAAGAATATA+TGG + chr3_1:75494736-75494755 None:intergenic 25.0%
! AAATTGGATAACATCCATTA+AGG + chr3_1:75494776-75494795 None:intergenic 25.0%
! ATTTAAGAACAGCATTTAGA+TGG - chr3_1:75494907-75494926 Msa0375710:intron 25.0%
!! CAAAGGTATAAAAACTGTAT+AGG - chr3_1:75495292-75495311 Msa0375710:intron 25.0%
! TCAATATTGTCAAACTTTAC+AGG - chr3_1:75495323-75495342 Msa0375710:intron 25.0%
! CAATATTGTCAAACTTTACA+GGG - chr3_1:75495324-75495343 Msa0375710:intron 25.0%
! TTATATTTGTGAACTTCTAG+AGG - chr3_1:75495613-75495632 Msa0375710:intron 25.0%
! AATAATAAACATGGAGAAAC+AGG + chr3_1:75495698-75495717 None:intergenic 25.0%
!! TAAAATTTTTGTCAATAGCC+TGG + chr3_1:75496032-75496051 None:intergenic 25.0%
!!! CAAAAATTTTAGTCATGGTA+TGG - chr3_1:75496041-75496060 Msa0375710:intron 25.0%
! CCATTTCTTGTATAAGTATT+TGG + chr3_1:75496151-75496170 None:intergenic 25.0%
! CCAAATACTTATACAAGAAA+TGG - chr3_1:75496148-75496167 Msa0375710:intron 25.0%
!!! AACTTATTTGGGTTGAAAAA+CGG + chr3_1:75496290-75496309 None:intergenic 25.0%
!!! TTACGCTTGTTTTTATTGAT+TGG - chr3_1:75496413-75496432 Msa0375710:intron 25.0%
! TTTCTCAAGAAAAAAAGAGA+GGG + chr3_1:75496857-75496876 None:intergenic 25.0%
!! TTTTCTCAAGAAAAAAAGAG+AGG + chr3_1:75496858-75496877 None:intergenic 25.0%
!!! CATAATTTTCAAGTTCAGAT+TGG - chr3_1:75497059-75497078 Msa0375710:five_prime_UTR 25.0%
! AGAAGCAAAGAAGTGTAAAA+CGG - chr3_1:75489865-75489884 Msa0375710:three_prime_UTR 30.0%
GATCACGAGTAAATTGTAAT+TGG - chr3_1:75490207-75490226 Msa0375710:three_prime_UTR 30.0%
TCACGAGTAAATTGTAATTG+GGG - chr3_1:75490209-75490228 Msa0375710:three_prime_UTR 30.0%
! ATGAGTTGGATACAACATTA+TGG - chr3_1:75490671-75490690 Msa0375710:intron 30.0%
CTGCCTTTGTTAATTTCTTA+CGG - chr3_1:75490817-75490836 Msa0375710:intron 30.0%
GTTCCGTAAGAAATTAACAA+AGG + chr3_1:75490823-75490842 None:intergenic 30.0%
! ACATTGTTTTCTTTCGACAA+TGG - chr3_1:75490861-75490880 Msa0375710:intron 30.0%
! GGATTAGGGAAAATATTTTG+AGG - chr3_1:75490972-75490991 Msa0375710:intron 30.0%
! TTAGAAGCCTCGTAATATTT+TGG + chr3_1:75491023-75491042 None:intergenic 30.0%
AGCCAAAAATCAAATAATCC+AGG + chr3_1:75491158-75491177 None:intergenic 30.0%
!!! ATTTTTGGCTGTTGTTGATA+AGG - chr3_1:75491168-75491187 Msa0375710:CDS 30.0%
! AGTTTTCTCCAACATATTGA+AGG - chr3_1:75491576-75491595 Msa0375710:CDS 30.0%
AATTCTCATGAAACATGTTC+CGG - chr3_1:75492066-75492085 Msa0375710:intron 30.0%
AATTAGAATACCCTTCTATC+CGG + chr3_1:75492088-75492107 None:intergenic 30.0%
TAGAAAAGGTCACAATTATG+TGG + chr3_1:75492111-75492130 None:intergenic 30.0%
! ATTTGAGATTGCAACACAAA+GGG + chr3_1:75492203-75492222 None:intergenic 30.0%
ATGTGGAAAGTGAAATGATA+AGG + chr3_1:75492313-75492332 None:intergenic 30.0%
! TGCTATTCTTTTTGCAATGT+CGG + chr3_1:75492476-75492495 None:intergenic 30.0%
AAAATACAAGTTAGACAAGG+TGG + chr3_1:75492522-75492541 None:intergenic 30.0%
CACAAAATACAAGTTAGACA+AGG + chr3_1:75492525-75492544 None:intergenic 30.0%
!! CTTGTCTAACTTGTATTTTG+TGG - chr3_1:75492523-75492542 Msa0375710:intron 30.0%
TTCTGAATTGCATAATGCAT+TGG - chr3_1:75492634-75492653 Msa0375710:intron 30.0%
TCTGAATTGCATAATGCATT+GGG - chr3_1:75492635-75492654 Msa0375710:intron 30.0%
CAGCCAAATAACAAATAGAT+TGG + chr3_1:75492695-75492714 None:intergenic 30.0%
!! CAATCTATTTGTTATTTGGC+TGG - chr3_1:75492693-75492712 Msa0375710:intron 30.0%
! TCTTTTCGATTTTAGACGAA+TGG - chr3_1:75492834-75492853 Msa0375710:intron 30.0%
TAATTTCACTGATACCTGAT+AGG + chr3_1:75492929-75492948 None:intergenic 30.0%
ATATAGGTAATGCTCATTTG+TGG - chr3_1:75493009-75493028 Msa0375710:intron 30.0%
! GTGTTATATTTTACAGGCTA+TGG - chr3_1:75493031-75493050 Msa0375710:intron 30.0%
ATCCATTGGTAAATTTCCAA+AGG - chr3_1:75493097-75493116 Msa0375710:intron 30.0%
! ATCCTTTGGAAATTTACCAA+TGG + chr3_1:75493102-75493121 None:intergenic 30.0%
TTACTAATTCTTATCACAGG+AGG - chr3_1:75493209-75493228 Msa0375710:intron 30.0%
GCTAACATGTATGAGAATTT+CGG - chr3_1:75493267-75493286 Msa0375710:intron 30.0%
TATGAGAATTTCGGAGATAT+TGG - chr3_1:75493276-75493295 Msa0375710:intron 30.0%
! AAAAGTACAAACCTACTGTT+TGG + chr3_1:75493362-75493381 None:intergenic 30.0%
CAAGAGTTAGATCATGAAAT+CGG + chr3_1:75493483-75493502 None:intergenic 30.0%
CATTGGTACTAGTAAATAAC+TGG + chr3_1:75493780-75493799 None:intergenic 30.0%
!! TTCAAATGCTTTTTACTGGT+GGG + chr3_1:75493875-75493894 None:intergenic 30.0%
!! TTCCTTCAAATGCTTTTTAC+TGG + chr3_1:75493879-75493898 None:intergenic 30.0%
GAAGGAACAGAAAAAAAATG+TGG - chr3_1:75493892-75493911 Msa0375710:intron 30.0%
CAGATTAACTACAATAAGGA+TGG + chr3_1:75494079-75494098 None:intergenic 30.0%
GTTAATCTGTTATCTGTCTT+CGG - chr3_1:75494090-75494109 Msa0375710:intron 30.0%
! TAGTTCTTTCTTTTTGATGC+GGG - chr3_1:75494184-75494203 Msa0375710:CDS 30.0%
TTGTCCTTAACTCATATTGT+TGG + chr3_1:75494230-75494249 None:intergenic 30.0%
AACAATATGAGTTAAGGACA+AGG - chr3_1:75494229-75494248 Msa0375710:CDS 30.0%
!!! TTATTTTTATCCAACCGACA+TGG - chr3_1:75494364-75494383 Msa0375710:intron 30.0%
TGAGTGATAAGTGATAACTT+TGG - chr3_1:75494501-75494520 Msa0375710:intron 30.0%
! CAATGAAAGCATATCAGATA+TGG - chr3_1:75494565-75494584 Msa0375710:CDS 30.0%
ATATGCTTTACGATATGAGA+AGG - chr3_1:75494610-75494629 Msa0375710:CDS 30.0%
AAAGCTGCATTAATTGAACA+GGG + chr3_1:75494640-75494659 None:intergenic 30.0%
AAAAGCTGCATTAATTGAAC+AGG + chr3_1:75494641-75494660 None:intergenic 30.0%
!!! TGATTTTGCTGCTTTTGATA+TGG - chr3_1:75494931-75494950 Msa0375710:intron 30.0%
!!! TGTATTTTTAGGGACTACAA+AGG - chr3_1:75495275-75495294 Msa0375710:intron 30.0%
TATAAAAACTGTATAGGGAC+TGG - chr3_1:75495298-75495317 Msa0375710:intron 30.0%
! TCGATGATTGAATATGGTTT+TGG + chr3_1:75495351-75495370 None:intergenic 30.0%
AATAATCTGAGTTGTGAAAC+TGG - chr3_1:75495733-75495752 Msa0375710:CDS 30.0%
AATGAAGATAATTACGTCCT+GGG + chr3_1:75495779-75495798 None:intergenic 30.0%
GACGTAATTATCTTCATTGT+TGG - chr3_1:75495781-75495800 Msa0375710:CDS 30.0%
GTAATTATCTTCATTGTTGG+CGG - chr3_1:75495784-75495803 Msa0375710:CDS 30.0%
TAATTATCTTCATTGTTGGC+GGG - chr3_1:75495785-75495804 Msa0375710:CDS 30.0%
CTTCTGTTCTTAATTCGAAA+AGG - chr3_1:75495884-75495903 Msa0375710:intron 30.0%
! AAGTGAAAGTACAGTTTGAA+AGG + chr3_1:75495964-75495983 None:intergenic 30.0%
TTCAAACTGTACTTTCACTT+TGG - chr3_1:75495964-75495983 Msa0375710:intron 30.0%
!! TTTTGGAAATTGATAGTTCC+AGG - chr3_1:75496011-75496030 Msa0375710:intron 30.0%
! TGCAAATGATGTGAGATTTT+TGG + chr3_1:75496115-75496134 None:intergenic 30.0%
TATGAAGTTAGTCATTGTCA+TGG - chr3_1:75496330-75496349 Msa0375710:intron 30.0%
TTTGGGCGATAAAGTTTATT+GGG - chr3_1:75496353-75496372 Msa0375710:intron 30.0%
ACAAAATCTTTCAATCTGCA+AGG + chr3_1:75496394-75496413 None:intergenic 30.0%
!!! TTGTTTTTATTGATTGGTCC+TGG - chr3_1:75496419-75496438 Msa0375710:intron 30.0%
!! TGTTTTTATTGATTGGTCCT+GGG - chr3_1:75496420-75496439 Msa0375710:intron 30.0%
! ATTTTGGATTCTTAGAACAG+AGG - chr3_1:75496493-75496512 Msa0375710:intron 30.0%
ACCAAACCATTGATCAATTT+AGG - chr3_1:75496774-75496793 Msa0375710:intron 30.0%
ACCTAAATTGATCAATGGTT+TGG + chr3_1:75496778-75496797 None:intergenic 30.0%
TTAGCACCTAAATTGATCAA+TGG + chr3_1:75496783-75496802 None:intergenic 30.0%
TGATCAATTTAGGTGCTAAT+CGG - chr3_1:75496784-75496803 Msa0375710:intron 30.0%
TTGTCTTCACCGAATAAATT+TGG - chr3_1:75497207-75497226 Msa0375710:five_prime_UTR 30.0%
TGTCTTCACCGAATAAATTT+GGG - chr3_1:75497208-75497227 Msa0375710:five_prime_UTR 30.0%
! GATAGGATTTGATAGCATTG+TGG + chr3_1:75490131-75490150 None:intergenic 35.0%
CACGAGTAAATTGTAATTGG+GGG - chr3_1:75490210-75490229 Msa0375710:three_prime_UTR 35.0%
AGTAAATTGTAATTGGGGGT+GGG - chr3_1:75490214-75490233 Msa0375710:three_prime_UTR 35.0%
TTGCCTCTGTTAATTTCTCA+CGG - chr3_1:75490270-75490289 Msa0375710:three_prime_UTR 35.0%
ATTCCGTGAGAAATTAACAG+AGG + chr3_1:75490276-75490295 None:intergenic 35.0%
AAACATCAAATTCAAGCTGG+TGG - chr3_1:75490342-75490361 Msa0375710:three_prime_UTR 35.0%
CATATCACATAAAACACCCA+AGG + chr3_1:75490390-75490409 None:intergenic 35.0%
GACAACATTAGAGAGAGTTT+AGG - chr3_1:75490532-75490551 Msa0375710:intron 35.0%
TTTAGGTACTTTGTGCATGT+TGG - chr3_1:75490549-75490568 Msa0375710:intron 35.0%
TTAGGTACTTTGTGCATGTT+GGG - chr3_1:75490550-75490569 Msa0375710:intron 35.0%
AGTCAAATCACTAGAGACAA+AGG - chr3_1:75490598-75490617 Msa0375710:intron 35.0%
! TGTTTTCTTTCGACAATGGA+TGG - chr3_1:75490865-75490884 Msa0375710:intron 35.0%
CTTGTAAAGCTATTACCTGT+GGG - chr3_1:75491097-75491116 Msa0375710:intron 35.0%
! CTATTACCTGTGGGTTATAT+TGG - chr3_1:75491106-75491125 Msa0375710:intron 35.0%
AAGATACCATTGTAACTTGG+TGG - chr3_1:75491130-75491149 Msa0375710:intron 35.0%
! TTTTTCCCTCGAATTTTCAC+AGG - chr3_1:75491200-75491219 Msa0375710:CDS 35.0%
ACTTACCTGTGAAAATTCGA+GGG + chr3_1:75491208-75491227 None:intergenic 35.0%
TACTTACCTGTGAAAATTCG+AGG + chr3_1:75491209-75491228 None:intergenic 35.0%
TACTGGATATTCTCTGATGT+AGG + chr3_1:75491357-75491376 None:intergenic 35.0%
ATGATGGTCCTTCAATATGT+TGG + chr3_1:75491587-75491606 None:intergenic 35.0%
! TATTCACTTACTTGCCGATT+CGG - chr3_1:75491606-75491625 Msa0375710:intron 35.0%
AATACGGACAATGTAGTCAA+AGG + chr3_1:75491890-75491909 None:intergenic 35.0%
TACATTGTCCGTATTGTAGT+AGG - chr3_1:75491895-75491914 Msa0375710:intron 35.0%
ACCAAACTCCTACTACAATA+CGG + chr3_1:75491906-75491925 None:intergenic 35.0%
! GACCTTTTCTATTTACTGTC+CGG - chr3_1:75492120-75492139 Msa0375710:intron 35.0%
AACCGGACAGTAAATAGAAA+AGG + chr3_1:75492125-75492144 None:intergenic 35.0%
! CATTTGAGATTGCAACACAA+AGG + chr3_1:75492204-75492223 None:intergenic 35.0%
TGTGTTGCAATCTCAAATGA+TGG - chr3_1:75492205-75492224 Msa0375710:intron 35.0%
GTGTTGCAATCTCAAATGAT+GGG - chr3_1:75492206-75492225 Msa0375710:intron 35.0%
! AAATGTAGTTTGAAGGCATG+TGG + chr3_1:75492330-75492349 None:intergenic 35.0%
!!! GATGTTGCATTTTAGCTACT+TGG - chr3_1:75492562-75492581 Msa0375710:intron 35.0%
TGATATAAGATGGCATGTTG+TGG + chr3_1:75492730-75492749 None:intergenic 35.0%
TAACCCCATTGCTAAATCAA+TGG - chr3_1:75492902-75492921 Msa0375710:intron 35.0%
!! AGGTCCATTGATTTAGCAAT+GGG + chr3_1:75492909-75492928 None:intergenic 35.0%
!! TAGGTCCATTGATTTAGCAA+TGG + chr3_1:75492910-75492929 None:intergenic 35.0%
GCTATGGTTCATGAATTGAT+AGG - chr3_1:75493047-75493066 Msa0375710:intron 35.0%
TGGTAAATTTCCAAAGGATC+AGG - chr3_1:75493103-75493122 Msa0375710:intron 35.0%
TAAATTTCCAAAGGATCAGG+AGG - chr3_1:75493106-75493125 Msa0375710:intron 35.0%
TTGGATACATTTCTTGCACT+GGG - chr3_1:75493129-75493148 Msa0375710:intron 35.0%
TGGTATGAATATCAAACGAC+TGG - chr3_1:75493296-75493315 Msa0375710:intron 35.0%
!! GGTTGATGAATTTCAACAAG+TGG - chr3_1:75493317-75493336 Msa0375710:intron 35.0%
AATCAGAACATCCAAACAGT+AGG - chr3_1:75493348-75493367 Msa0375710:intron 35.0%
TCATAACTGTAACAGCTGAA+AGG + chr3_1:75493414-75493433 None:intergenic 35.0%
CGATTTCATGATCTAACTCT+TGG - chr3_1:75493481-75493500 Msa0375710:CDS 35.0%
AGGGTAGTTGTCAACAAATT+TGG + chr3_1:75493519-75493538 None:intergenic 35.0%
! CATGCATTTTTCTGTACTCA+GGG + chr3_1:75493538-75493557 None:intergenic 35.0%
CTGAGTACAGAAAAATGCAT+GGG - chr3_1:75493537-75493556 Msa0375710:CDS 35.0%
TGTGACAAAACATGTGACTT+TGG - chr3_1:75493562-75493581 Msa0375710:intron 35.0%
TTCACAAACAGAACAAGAGT+TGG - chr3_1:75493631-75493650 Msa0375710:intron 35.0%
!! TAACTTTTGAGAACAGCCAA+AGG + chr3_1:75493720-75493739 None:intergenic 35.0%
CATAGTGACATTACTGACAT+TGG + chr3_1:75493797-75493816 None:intergenic 35.0%
!! TCAAATGCTTTTTACTGGTG+GGG + chr3_1:75493874-75493893 None:intergenic 35.0%
!! CTTCAAATGCTTTTTACTGG+TGG + chr3_1:75493876-75493895 None:intergenic 35.0%
!! CACCAGTAAAAAGCATTTGA+AGG - chr3_1:75493874-75493893 Msa0375710:intron 35.0%
TTGCTGTAGCAGCATTTATT+GGG - chr3_1:75493977-75493996 Msa0375710:CDS 35.0%
!! AGTGCTGATATTTGTTCGAA+AGG - chr3_1:75494048-75494067 Msa0375710:intron 35.0%
! AGTTCTTTCTTTTTGATGCG+GGG - chr3_1:75494185-75494204 Msa0375710:CDS 35.0%
! AGAGTTGCATTTTTCCATGT+CGG + chr3_1:75494381-75494400 None:intergenic 35.0%
GTCTCTATGTACTCATTTAC+AGG - chr3_1:75494523-75494542 Msa0375710:intron 35.0%
TCTATGTACTCATTTACAGG+CGG - chr3_1:75494526-75494545 Msa0375710:intron 35.0%
ATTTACCCCAGGTTTGTATT+TGG + chr3_1:75494687-75494706 None:intergenic 35.0%
CAACAGTTTAAATTTACCCC+AGG + chr3_1:75494698-75494717 None:intergenic 35.0%
TTAAGGATTAAGAGACGTTC+AGG + chr3_1:75494759-75494778 None:intergenic 35.0%
GAACGTCTCTTAATCCTTAA+TGG - chr3_1:75494759-75494778 Msa0375710:CDS 35.0%
! TAGTGGGGGTGAAATTATTT+TGG - chr3_1:75494814-75494833 Msa0375710:intron 35.0%
! AGTGGGGGTGAAATTATTTT+GGG - chr3_1:75494815-75494834 Msa0375710:intron 35.0%
GTGTTGTCTTGTCATATCTT+CGG - chr3_1:75494840-75494859 Msa0375710:intron 35.0%
CTTGTCATATCTTCGGATTT+AGG - chr3_1:75494847-75494866 Msa0375710:intron 35.0%
AAGAGAACTGGTGATCTTTA+TGG - chr3_1:75495038-75495057 Msa0375710:intron 35.0%
!! TTGATTTGAGTTTTGCTGCA+GGG - chr3_1:75495435-75495454 Msa0375710:CDS 35.0%
TGACAATGCTTTCCATGATT+TGG + chr3_1:75495500-75495519 None:intergenic 35.0%
!! ATCATGGAAAGCATTGTCAA+AGG - chr3_1:75495501-75495520 Msa0375710:intron 35.0%
ATGTAGACTACCCATTTGTT+GGG - chr3_1:75495535-75495554 Msa0375710:intron 35.0%
GAAAGTGATTCCCAACAAAT+GGG + chr3_1:75495548-75495567 None:intergenic 35.0%
TGAAAGTGATTCCCAACAAA+TGG + chr3_1:75495549-75495568 None:intergenic 35.0%
ATGTAGTGGCATCACAAATT+TGG + chr3_1:75495670-75495689 None:intergenic 35.0%
ATGAAGATAATTACGTCCTG+GGG + chr3_1:75495778-75495797 None:intergenic 35.0%
CAATGAAGATAATTACGTCC+TGG + chr3_1:75495780-75495799 None:intergenic 35.0%
CTACAAAATGCCAGTAATAC+AGG - chr3_1:75495838-75495857 Msa0375710:intron 35.0%
CAAGAAATGGTAAAATGGCA+TGG - chr3_1:75496161-75496180 Msa0375710:intron 35.0%
AGTTAGTCATTGTCATGGTT+TGG - chr3_1:75496335-75496354 Msa0375710:intron 35.0%
GTTAGTCATTGTCATGGTTT+GGG - chr3_1:75496336-75496355 Msa0375710:intron 35.0%
GTTTGGGCGATAAAGTTTAT+TGG - chr3_1:75496352-75496371 Msa0375710:intron 35.0%
!!! GGTTTACTTTTTGAACTTGC+AGG - chr3_1:75496514-75496533 Msa0375710:intron 35.0%
! TTTGAACTTGCAGGTTTTTC+AGG - chr3_1:75496523-75496542 Msa0375710:intron 35.0%
! TTGAACTTGCAGGTTTTTCA+GGG - chr3_1:75496524-75496543 Msa0375710:intron 35.0%
GGATATACTTCAAACAACAG+AGG + chr3_1:75496586-75496605 None:intergenic 35.0%
! CTGTTGTTTGAAGTATATCC+TGG - chr3_1:75496586-75496605 Msa0375710:intron 35.0%
! ATAGTTTTTACGACAGCTTC+AGG - chr3_1:75496639-75496658 Msa0375710:intron 35.0%
!!! AGGCTGGGAATTTTAGTTTT+GGG - chr3_1:75496659-75496678 Msa0375710:intron 35.0%
ATTGTCGTCTAGATCAACAA+TGG + chr3_1:75496753-75496772 None:intergenic 35.0%
ATAGTGCACACAAAGCATAT+AGG - chr3_1:75496877-75496896 Msa0375710:intron 35.0%
GGTACAATGAAAGAAACCTT+TGG - chr3_1:75496898-75496917 Msa0375710:intron 35.0%
! CTAGATTAGCCAAAAGATGA+TGG + chr3_1:75496938-75496957 None:intergenic 35.0%
!! CTTTTGGCTAATCTAGTATC+AGG - chr3_1:75496942-75496961 Msa0375710:intron 35.0%
!!! GTATCAGGTTTTATTGACAC+TGG - chr3_1:75496957-75496976 Msa0375710:CDS 35.0%
TGAAGCAGTGAATCTACAAA+TGG + chr3_1:75497041-75497060 None:intergenic 35.0%
AAGTGTAAAACGGTGCGTTA+AGG - chr3_1:75489875-75489894 Msa0375710:three_prime_UTR 40.0%
AGAAGAAGGTTTCAGAGTTG+AGG + chr3_1:75489955-75489974 None:intergenic 40.0%
AGTCGAGAAGAAGAAGAAGA+AGG + chr3_1:75489969-75489988 None:intergenic 40.0%
!! TTCCTCATCGATTCACAAGA+TGG - chr3_1:75490009-75490028 Msa0375710:three_prime_UTR 40.0%
CGCATCTTACAAGACATATC+TGG - chr3_1:75490064-75490083 Msa0375710:three_prime_UTR 40.0%
ACAAGACATATCTGGCATGA+AGG - chr3_1:75490072-75490091 Msa0375710:three_prime_UTR 40.0%
TCTCATCCTCGATTCTCAAA+CGG - chr3_1:75490096-75490115 Msa0375710:three_prime_UTR 40.0%
GAGTAAATTGTAATTGGGGG+TGG - chr3_1:75490213-75490232 Msa0375710:three_prime_UTR 40.0%
ATTCAAGCTGGTGGTTGAAA+TGG - chr3_1:75490351-75490370 Msa0375710:three_prime_UTR 40.0%
TTCAAGCTGGTGGTTGAAAT+GGG - chr3_1:75490352-75490371 Msa0375710:three_prime_UTR 40.0%
ACATAAAACACCCAAGGTCA+AGG + chr3_1:75490384-75490403 None:intergenic 40.0%
TGTTGTATGAGACAGAGTGT+TGG - chr3_1:75490424-75490443 Msa0375710:three_prime_UTR 40.0%
! GTTGTATGAGACAGAGTGTT+GGG - chr3_1:75490425-75490444 Msa0375710:three_prime_UTR 40.0%
! AATTAAGTGTAGCGGAGATG+AGG - chr3_1:75490479-75490498 Msa0375710:CDS 40.0%
! GGATGTTGCATTGATGTGAT+AGG - chr3_1:75490500-75490519 Msa0375710:CDS 40.0%
CTGCTTAGTGGGATAAGATT+TGG - chr3_1:75490719-75490738 Msa0375710:intron 40.0%
GAAGAGGCCAAAATATTACG+AGG - chr3_1:75491013-75491032 Msa0375710:intron 40.0%
GCTTGTAAAGCTATTACCTG+TGG - chr3_1:75491096-75491115 Msa0375710:intron 40.0%
ATCTTGCCAATATAACCCAC+AGG + chr3_1:75491115-75491134 None:intergenic 40.0%
GGCAAGATACCATTGTAACT+TGG - chr3_1:75491127-75491146 Msa0375710:intron 40.0%
ATTGCCTTGAGATGTGACAT+TGG + chr3_1:75491321-75491340 None:intergenic 40.0%
TATTCTCTGATGTAGGTCGA+AGG + chr3_1:75491350-75491369 None:intergenic 40.0%
AGGTGATATTCTCCGAATCT+AGG + chr3_1:75491402-75491421 None:intergenic 40.0%
TCGGAGAATATCACCTATGT+AGG - chr3_1:75491406-75491425 Msa0375710:intron 40.0%
CGGCAAGTAAGTGAATATGA+TGG + chr3_1:75491603-75491622 None:intergenic 40.0%
AACTTCCTGTTCATCCGAAT+CGG + chr3_1:75491623-75491642 None:intergenic 40.0%
AAGTTCAGGTAACTGCTCAT+GGG - chr3_1:75491650-75491669 Msa0375710:intron 40.0%
GAGACGGAATATATAAGGGT+TGG + chr3_1:75491785-75491804 None:intergenic 40.0%
TCCGTATTGTAGTAGGAGTT+TGG - chr3_1:75491902-75491921 Msa0375710:intron 40.0%
GTATTGTAGTAGGAGTTTGG+TGG - chr3_1:75491905-75491924 Msa0375710:intron 40.0%
TGAAACATGTTCCGGATAGA+AGG - chr3_1:75492074-75492093 Msa0375710:intron 40.0%
GAAACATGTTCCGGATAGAA+GGG - chr3_1:75492075-75492094 Msa0375710:intron 40.0%
ATTGCAACACAAAGGGTAGA+GGG + chr3_1:75492196-75492215 None:intergenic 40.0%
ATAGTACTCCTGGATGATCA+GGG + chr3_1:75492269-75492288 None:intergenic 40.0%
!!! CATTTTAGCTACTTGGTCGA+TGG - chr3_1:75492569-75492588 Msa0375710:intron 40.0%
ACAGAAACTGATGTACCAAG+AGG - chr3_1:75492804-75492823 Msa0375710:intron 40.0%
! GGAAGTTTCTCCTTTGTTGT+TGG - chr3_1:75492855-75492874 Msa0375710:intron 40.0%
CTGTCAATCACCAACAACAA+AGG + chr3_1:75492868-75492887 None:intergenic 40.0%
!! CTTTGTTGTTGGTGATTGAC+AGG - chr3_1:75492866-75492885 Msa0375710:intron 40.0%
TGATTTAGCAATGGGGTTAC+AGG + chr3_1:75492901-75492920 None:intergenic 40.0%
!! GGTCCATTGATTTAGCAATG+GGG + chr3_1:75492908-75492927 None:intergenic 40.0%
GCTAAATCAATGGACCTATC+AGG - chr3_1:75492912-75492931 Msa0375710:intron 40.0%
AGGAATCCAAGACAACAAAG+TGG - chr3_1:75493067-75493086 Msa0375710:intron 40.0%
AAAGTGGACGTCAAATCCAT+TGG - chr3_1:75493083-75493102 Msa0375710:intron 40.0%
GTTGGATACATTTCTTGCAC+TGG - chr3_1:75493128-75493147 Msa0375710:intron 40.0%
CATGATCTAACTCTTGGAAG+AGG - chr3_1:75493487-75493506 Msa0375710:CDS 40.0%
! CCATGCATTTTTCTGTACTC+AGG + chr3_1:75493539-75493558 None:intergenic 40.0%
CCTGAGTACAGAAAAATGCA+TGG - chr3_1:75493536-75493555 Msa0375710:CDS 40.0%
! CTTGCTGTAGCAGCATTTAT+TGG - chr3_1:75493976-75493995 Msa0375710:CDS 40.0%
TGCTGTAGCAGCATTTATTG+GGG - chr3_1:75493978-75493997 Msa0375710:CDS 40.0%
GAAACTCTACATTGTTCCCT+AGG - chr3_1:75494112-75494131 Msa0375710:intron 40.0%
! TTGCATTTTTCCATGTCGGT+TGG + chr3_1:75494377-75494396 None:intergenic 40.0%
AGATATGGACAGACTACGTT+TGG - chr3_1:75494580-75494599 Msa0375710:CDS 40.0%
AGGTTTGTATTTGGCAGATC+TGG + chr3_1:75494678-75494697 None:intergenic 40.0%
AGATCTGCCAAATACAAACC+TGG - chr3_1:75494677-75494696 Msa0375710:CDS 40.0%
GATCTGCCAAATACAAACCT+GGG - chr3_1:75494678-75494697 Msa0375710:CDS 40.0%
ATCTGCCAAATACAAACCTG+GGG - chr3_1:75494679-75494698 Msa0375710:CDS 40.0%
!!! TGTCCAGTTTCTTTTGAAGC+AGG - chr3_1:75495004-75495023 Msa0375710:intron 40.0%
AATGAACATTGCGCGTAACA+TGG - chr3_1:75495073-75495092 Msa0375710:intron 40.0%
! GCACTTTTAGTCCCATGTAA+GGG + chr3_1:75495247-75495266 None:intergenic 40.0%
! TGCACTTTTAGTCCCATGTA+AGG + chr3_1:75495248-75495267 None:intergenic 40.0%
TCAAGCATATGATGCTACAG+TGG + chr3_1:75495388-75495407 None:intergenic 40.0%
!! CTTGATTTGAGTTTTGCTGC+AGG - chr3_1:75495434-75495453 Msa0375710:CDS 40.0%
! TCCATGATTTGGAACAGAAG+CGG + chr3_1:75495489-75495508 None:intergenic 40.0%
!! TGGAAAGCATTGTCAAAGGA+CGG - chr3_1:75495505-75495524 Msa0375710:intron 40.0%
GATGTAGACTACCCATTTGT+TGG - chr3_1:75495534-75495553 Msa0375710:intron 40.0%
GTTGGGAATCACTTTCAACA+AGG - chr3_1:75495552-75495571 Msa0375710:intron 40.0%
GGAATCACTTTCAACAAGGA+AGG - chr3_1:75495556-75495575 Msa0375710:intron 40.0%
AGAAACAGGCAACAATGTAG+TGG + chr3_1:75495684-75495703 None:intergenic 40.0%
CTGGTGACTGTATAAAAACC+AGG - chr3_1:75495752-75495771 Msa0375710:CDS 40.0%
GGACAACATATGAAGAGTCA+CGG - chr3_1:75495806-75495825 Msa0375710:CDS 40.0%
GGCGATAAAGTTTATTGGGT+AGG - chr3_1:75496357-75496376 Msa0375710:intron 40.0%
ATCCAACATTTGCTTTGCAC+AGG - chr3_1:75496466-75496485 Msa0375710:intron 40.0%
TACCTGTGCAAAGCAAATGT+TGG + chr3_1:75496471-75496490 None:intergenic 40.0%
CACATGATGCAAAATATGCC+AGG + chr3_1:75496607-75496626 None:intergenic 40.0%
! CTGGCATATTTTGCATCATG+TGG - chr3_1:75496605-75496624 Msa0375710:intron 40.0%
!!! CAGGCTGGGAATTTTAGTTT+TGG - chr3_1:75496658-75496677 Msa0375710:intron 40.0%
TTGAATCGCACTCAATTGCA+AGG + chr3_1:75496812-75496831 None:intergenic 40.0%
!! CCAAAAGATGATGGAAGACT+TGG + chr3_1:75496929-75496948 None:intergenic 40.0%
! CCAAGTCTTCCATCATCTTT+TGG - chr3_1:75496926-75496945 Msa0375710:intron 40.0%
CATCTTTACAAGACAATCCC+AGG + chr3_1:75497158-75497177 None:intergenic 40.0%
ATCGTACCGTTTGAGAATCG+AGG + chr3_1:75490105-75490124 None:intergenic 45.0%
TCAAGCTGGTGGTTGAAATG+GGG - chr3_1:75490353-75490372 Msa0375710:three_prime_UTR 45.0%
TCTGTCTCATACAACATCGC+CGG + chr3_1:75490420-75490439 None:intergenic 45.0%
ACTAAGCAGAGTATGCTGCA+AGG + chr3_1:75490708-75490727 None:intergenic 45.0%
TTGCAGCATACTCTGCTTAG+TGG - chr3_1:75490707-75490726 Msa0375710:intron 45.0%
TGCAGCATACTCTGCTTAGT+GGG - chr3_1:75490708-75490727 Msa0375710:intron 45.0%
TTTCGACAATGGATGGCAAG+AGG - chr3_1:75490872-75490891 Msa0375710:intron 45.0%
CAGGTACCACCAAGTTACAA+TGG + chr3_1:75491139-75491158 None:intergenic 45.0%
! CATTGTAACTTGGTGGTACC+TGG - chr3_1:75491137-75491156 Msa0375710:intron 45.0%
!! TGACATTGGTTCGCTTGACT+TGG + chr3_1:75491307-75491326 None:intergenic 45.0%
CGAACCAATGTCACATCTCA+AGG - chr3_1:75491314-75491333 Msa0375710:intron 45.0%
CAAGTTCAGGTAACTGCTCA+TGG - chr3_1:75491649-75491668 Msa0375710:intron 45.0%
AGTTCAGGTAACTGCTCATG+GGG - chr3_1:75491651-75491670 Msa0375710:intron 45.0%
CACTGTTGAGCTTGAAGCTT+TGG - chr3_1:75492169-75492188 Msa0375710:intron 45.0%
GATTGCAACACAAAGGGTAG+AGG + chr3_1:75492197-75492216 None:intergenic 45.0%
! ATTTGTTGCCCTGATCATCC+AGG - chr3_1:75492258-75492277 Msa0375710:intron 45.0%
CATAGTACTCCTGGATGATC+AGG + chr3_1:75492270-75492289 None:intergenic 45.0%
CAAAGTCTGCATAGTACTCC+TGG + chr3_1:75492279-75492298 None:intergenic 45.0%
CATTGCAGCGTTTCAGTGAT+CGG - chr3_1:75492380-75492399 Msa0375710:CDS 45.0%
ATTGCAGCGTTTCAGTGATC+GGG - chr3_1:75492381-75492400 Msa0375710:CDS 45.0%
! TTCAGTGATCGGGTTGTTGA+AGG - chr3_1:75492391-75492410 Msa0375710:CDS 45.0%
CTGATGTACCAAGAGGAAAG+TGG - chr3_1:75492811-75492830 Msa0375710:intron 45.0%
CGAAAAGACCACTTTCCTCT+TGG + chr3_1:75492822-75492841 None:intergenic 45.0%
!! TGTTGTTGGTGATTGACAGG+AGG - chr3_1:75492869-75492888 Msa0375710:intron 45.0%
!! GTTGTTGGTGATTGACAGGA+GGG - chr3_1:75492870-75492889 Msa0375710:intron 45.0%
! TGACGTCCACTTTGTTGTCT+TGG + chr3_1:75493076-75493095 None:intergenic 45.0%
TTTCCAAAGGATCAGGAGGT+TGG - chr3_1:75493110-75493129 Msa0375710:intron 45.0%
TATCCAACCTCCTGATCCTT+TGG + chr3_1:75493116-75493135 None:intergenic 45.0%
ACAGGAGGTTGTTCTGTCAT+CGG - chr3_1:75493224-75493243 Msa0375710:intron 45.0%
CTAACTCTTGGAAGAGGACA+TGG - chr3_1:75493493-75493512 Msa0375710:CDS 45.0%
!! GAACAAGAGTTGGCTTGCAA+TGG - chr3_1:75493641-75493660 Msa0375710:intron 45.0%
!! AAGAGTTGGCTTGCAATGGA+GGG - chr3_1:75493645-75493664 Msa0375710:intron 45.0%
TGTAGCAGCATTTATTGGGG+TGG - chr3_1:75493981-75494000 Msa0375710:CDS 45.0%
GCATTTATTGGGGTGGTTCT+AGG - chr3_1:75493988-75494007 Msa0375710:CDS 45.0%
CAGCCTGCTTCAAAAGAAAC+TGG + chr3_1:75495010-75495029 None:intergenic 45.0%
!!! CAGTTTCTTTTGAAGCAGGC+TGG - chr3_1:75495008-75495027 Msa0375710:intron 45.0%
!!! GTATGTTTTTGGTCCCTCAC+TGG - chr3_1:75495220-75495239 Msa0375710:intron 45.0%
ATGCCAGTAATACAGGCGTT+CGG - chr3_1:75495845-75495864 Msa0375710:intron 45.0%
AAACCGAACGCCTGTATTAC+TGG + chr3_1:75495851-75495870 None:intergenic 45.0%
ACAGGCGTTCGGTTTATACT+TGG - chr3_1:75495856-75495875 Msa0375710:intron 45.0%
TCATGGTATGGGCTTACTAG+AGG - chr3_1:75496053-75496072 Msa0375710:intron 45.0%
GCTGCTAAACTAATCAACCC+AGG + chr3_1:75496440-75496459 None:intergenic 45.0%
! GCTTTGCACAGGTAGCATTT+TGG - chr3_1:75496477-75496496 Msa0375710:intron 45.0%
!!! TTGCAGGTTTTTCAGGGACT+TGG - chr3_1:75496530-75496549 Msa0375710:intron 45.0%
! TTTTTACGACAGCTTCAGGC+TGG - chr3_1:75496643-75496662 Msa0375710:intron 45.0%
! TTTTACGACAGCTTCAGGCT+GGG - chr3_1:75496644-75496663 Msa0375710:intron 45.0%
CTGCTAAAGGAGTTCGATGT+TGG - chr3_1:75496707-75496726 Msa0375710:intron 45.0%
GGAAGACTTGGCAAATCCAA+AGG + chr3_1:75496917-75496936 None:intergenic 45.0%
ATGCACAGTTGCAACGTTGA+TGG - chr3_1:75497115-75497134 Msa0375710:five_prime_UTR 45.0%
!! TATTATTATTATTAATATAG+TGG - chr3_1:75491935-75491954 Msa0375710:intron 5.0%
!!! ATTTTTCAAAAAATTTAAAA+AGG + chr3_1:75496251-75496270 None:intergenic 5.0%
CGCCATCTTGTGAATCGATG+AGG + chr3_1:75490014-75490033 None:intergenic 50.0%
CAAGCTGGTGGTTGAAATGG+GGG - chr3_1:75490354-75490373 Msa0375710:three_prime_UTR 50.0%
AATGGATGGCAAGAGGTTGC+AGG - chr3_1:75490879-75490898 Msa0375710:intron 50.0%
! CAGCTGGCTAGTCCTAGATT+CGG - chr3_1:75491387-75491406 Msa0375710:intron 50.0%
!! ACTTGCCGATTCGGATGAAC+AGG - chr3_1:75491615-75491634 Msa0375710:intron 50.0%
GGAAGTTGTCCAGCAAGTTC+AGG - chr3_1:75491636-75491655 Msa0375710:intron 50.0%
GAGCAGTTACCTGAACTTGC+TGG + chr3_1:75491648-75491667 None:intergenic 50.0%
CTGAAGGATCTACGACAGCT+GGG + chr3_1:75492360-75492379 None:intergenic 50.0%
CTGAAACGCTGCAATGCTGA+AGG + chr3_1:75492376-75492395 None:intergenic 50.0%
!! CAAGAGTTGGCTTGCAATGG+AGG - chr3_1:75493644-75493663 Msa0375710:intron 50.0%
! TTTTTCGCCTGCTCTGCACA+TGG - chr3_1:75493951-75493970 Msa0375710:CDS 50.0%
!! GCTGGTGTTGACAAGAGAAC+TGG - chr3_1:75495026-75495045 Msa0375710:intron 50.0%
! TAACATGGCTCGTGGACTGA+AGG - chr3_1:75495088-75495107 Msa0375710:intron 50.0%
! TGATTTGGAACAGAAGCGGC+TGG + chr3_1:75495485-75495504 None:intergenic 50.0%
GCCGCTTCTGTTCCAAATCA+TGG - chr3_1:75495485-75495504 Msa0375710:intron 50.0%
! GTGAACTTCTAGAGGTCTCG+TGG - chr3_1:75495621-75495640 Msa0375710:intron 50.0%
CTGTATAAAAACCAGGCCCC+AGG - chr3_1:75495759-75495778 Msa0375710:CDS 50.0%
GGCGTTCGGTTTATACTTGG+TGG - chr3_1:75495859-75495878 Msa0375710:intron 50.0%
GGACTTGGAAGAAGCTCAGA+GGG - chr3_1:75496545-75496564 Msa0375710:intron 50.0%
ATTCAAGAGCAAGCCACCCA+TGG - chr3_1:75496826-75496845 Msa0375710:intron 50.0%
AAAAGAGAGGGACGAGCCAT+GGG + chr3_1:75496845-75496864 None:intergenic 50.0%
AAAAAGAGAGGGACGAGCCA+TGG + chr3_1:75496846-75496865 None:intergenic 50.0%
!! CAGTTGCAACGTTGATGGCA+TGG - chr3_1:75497120-75497139 Msa0375710:five_prime_UTR 50.0%
CATGGCATTATGTGCTGCCT+GGG - chr3_1:75497138-75497157 Msa0375710:five_prime_UTR 50.0%
AAGGTCTCGTTCGTCGTCCT+CGG - chr3_1:75489894-75489913 Msa0375710:three_prime_UTR 55.0%
ATGGGGGATGACCTTGACCT+TGG - chr3_1:75490370-75490389 Msa0375710:three_prime_UTR 55.0%
TGGGGGATGACCTTGACCTT+GGG - chr3_1:75490371-75490390 Msa0375710:three_prime_UTR 55.0%
CCAGCTGACGACGCATATAC+TGG + chr3_1:75491374-75491393 None:intergenic 55.0%
CCAGTATATGCGTCGTCAGC+TGG - chr3_1:75491371-75491390 Msa0375710:intron 55.0%
GCTGAAGGATCTACGACAGC+TGG + chr3_1:75492361-75492380 None:intergenic 55.0%
!! TTGGCTTGCAATGGAGGGCA+AGG - chr3_1:75493650-75493669 Msa0375710:intron 55.0%
!!! AGGGCAAGGAGCTGCTTTTG+AGG - chr3_1:75493664-75493683 Msa0375710:intron 55.0%
GCAAGTACCATGTGCAGAGC+AGG + chr3_1:75493961-75493980 None:intergenic 55.0%
ATTGCGCGTAACATGGCTCG+TGG - chr3_1:75495080-75495099 Msa0375710:intron 55.0%
TCCCTCACTGGACCCTTACA+TGG - chr3_1:75495232-75495251 Msa0375710:intron 55.0%
CCCATGTAAGGGTCCAGTGA+GGG + chr3_1:75495236-75495255 None:intergenic 55.0%
CCCTCACTGGACCCTTACAT+GGG - chr3_1:75495233-75495252 Msa0375710:intron 55.0%
TCCCATGTAAGGGTCCAGTG+AGG + chr3_1:75495237-75495256 None:intergenic 55.0%
GATAATTACGTCCTGGGGCC+TGG + chr3_1:75495773-75495792 None:intergenic 55.0%
GGGACTTGGAAGAAGCTCAG+AGG - chr3_1:75496544-75496563 Msa0375710:intron 55.0%
GCATGGCATTATGTGCTGCC+TGG - chr3_1:75497137-75497156 Msa0375710:five_prime_UTR 55.0%
GAACAGAAGCGGCTGGTGCT+GGG + chr3_1:75495478-75495497 None:intergenic 60.0%
AGATCCACCACCAGCGACCG+AGG + chr3_1:75489914-75489933 None:intergenic 65.0%
GGAACAGAAGCGGCTGGTGC+TGG + chr3_1:75495479-75495498 None:intergenic 65.0%
AGAGAGGGACGAGCCATGGG+TGG + chr3_1:75496842-75496861 None:intergenic 65.0%
CGTTCGTCGTCCTCGGTCGC+TGG - chr3_1:75489901-75489920 Msa0375710:three_prime_UTR 70.0%
TCGTCGTCCTCGGTCGCTGG+TGG - chr3_1:75489904-75489923 Msa0375710:three_prime_UTR 70.0%
TCGTCCTCGGTCGCTGGTGG+TGG - chr3_1:75489907-75489926 Msa0375710:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 75489809 75497258 75489809 ID=Msa0375710;Name=Msa0375710
chr3_1 mRNA 75489809 75497258 75489809 ID=Msa0375710-mRNA-1;Parent=Msa0375710;Name=Msa0375710-mRNA-1;_AED=0.09;_eAED=0.09;_QI=219|1|1|1|1|1|13|662|568
chr3_1 exon 75489809 75490531 75489809 ID=Msa0375710-mRNA-1:exon:17739;Parent=Msa0375710-mRNA-1
chr3_1 exon 75491162 75491293 75491162 ID=Msa0375710-mRNA-1:exon:17738;Parent=Msa0375710-mRNA-1
chr3_1 exon 75491490 75491611 75491490 ID=Msa0375710-mRNA-1:exon:17737;Parent=Msa0375710-mRNA-1
chr3_1 exon 75491958 75492065 75491958 ID=Msa0375710-mRNA-1:exon:17736;Parent=Msa0375710-mRNA-1
chr3_1 exon 75492367 75492522 75492367 ID=Msa0375710-mRNA-1:exon:17735;Parent=Msa0375710-mRNA-1
chr3_1 exon 75493382 75493560 75493382 ID=Msa0375710-mRNA-1:exon:17734;Parent=Msa0375710-mRNA-1
chr3_1 exon 75493698 75493839 75493698 ID=Msa0375710-mRNA-1:exon:17733;Parent=Msa0375710-mRNA-1
chr3_1 exon 75493940 75494020 75493940 ID=Msa0375710-mRNA-1:exon:17732;Parent=Msa0375710-mRNA-1
chr3_1 exon 75494134 75494259 75494134 ID=Msa0375710-mRNA-1:exon:17731;Parent=Msa0375710-mRNA-1
chr3_1 exon 75494560 75494787 75494560 ID=Msa0375710-mRNA-1:exon:17730;Parent=Msa0375710-mRNA-1
chr3_1 exon 75495410 75495489 75495410 ID=Msa0375710-mRNA-1:exon:17729;Parent=Msa0375710-mRNA-1
chr3_1 exon 75495644 75495845 75495644 ID=Msa0375710-mRNA-1:exon:17728;Parent=Msa0375710-mRNA-1
chr3_1 exon 75496950 75497258 75496950 ID=Msa0375710-mRNA-1:exon:17727;Parent=Msa0375710-mRNA-1
chr3_1 five_prime_UTR 75497040 75497258 75497040 ID=Msa0375710-mRNA-1:five_prime_utr;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75496950 75497039 75496950 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75495644 75495845 75495644 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75495410 75495489 75495410 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75494560 75494787 75494560 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75494134 75494259 75494134 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75493940 75494020 75493940 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75493698 75493839 75493698 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75493382 75493560 75493382 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75492367 75492522 75492367 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75491958 75492065 75491958 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75491490 75491611 75491490 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75491162 75491293 75491162 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 CDS 75490471 75490531 75490471 ID=Msa0375710-mRNA-1:cds;Parent=Msa0375710-mRNA-1
chr3_1 three_prime_UTR 75489809 75490470 75489809 ID=Msa0375710-mRNA-1:three_prime_utr;Parent=Msa0375710-mRNA-1
Gene Sequence

>Msa0375710

ATGGCGCTGACATCATCTGCGCGTGATTACATAAATCGCATCTTACAAGACATATCTGGCATGAAGGTTCTCATCCTCGATTCTCAAACGGTAAGTATTGTGAGTGTTGTGTATTCACAATCAGAGCTTCTTCAGAAAGAAGTATTTTTAGTAGAGTTGGTTGATTCAATTTCCAAGTCAAGCGAACCAATGTCACATCTCAAGGCAATTTACTTCCTTCGACCTACATCAGAGAATATCCAGTATATGCGTCGTCAGCTGGCTAGTCCTAGATTCGGAGAATATCACCTATTTTTCTCCAACATATTGAAGGACCATCATATTCACTTACTTGCCGATTCGGATGAACAGGAAGTTGTCCAGCAAGTTCAGGAGTACTATGCAGACTTTGTTGCTATTGATCCTTATCATTTCACTTTCCACATGCCTTCAAACTACATTTATATGCTCCCAGCTGTCGTAGATCCTTCAGCATTGCAGCGTTTCAGTGATCGGGTTGTTGAAGGTCTTGCTGCTGTTTTTTTGACATTAAAACGGAGACCAGTTATTAGATATCAAAGAACATCCGACATTGCAAAAAGAATAGCACATGAAGCATCTAAACTGATGTACCAAGAGGAAAGTGGTCTTTTCGATTTTAGACGAATGGAAGTTTCTCCTTTGTTGTTGGTGATTGACAGGAGGGATGATCCTGTAACCCCATTGCTAAATCAATGGACCTATCAGGCTATGGTTCATGAATTGATAGGAATCCAAGACAACAAAGTGGACGTCAAATCCATTGGTAAATTTCCAAAGGATCAGGAGGAGGTTGTTCTGTCATCGGAACAAGATTCCTTTTTCAAAGCTAACATGTATGAGAATTTCGGAGATATTGGTATGAATATCAAACGACTGGTTGATGAATTTCAACAAGTGGCAAAGAGTAATCAGAACATCCAAACAGTAGAGGACATGGCCAAATTTGTTGACAACTACCCTGAGTACAGAAAAATGCATGGGAATGTGACAAAACATGTGACTTTGGTAACAGAAATGAGCAAGATAGTTGAAGAGCGAAAACTTATGTTAGTTTCACAAACAGAACAAGAGTTGGCTTGCAATGGAGGGCAAGGAGCTGCTTTTGAGGCGGTGACTAATCTACTAAACAATGAAAGCATATCAGATATGGACAGACTACGTTTGGTCATGCTATATGCTTTACGATATGAGAAGGAGAGCCCTGTTCAATTAATGCAGCTTTTCAACAAACTTGCTTCCAGATCTGCCAAATACAAACCTGGGCTTGTCCAGTTTCTTTTGAAGCAGGCTGGTGTTGACAAGAGAACTGGTGATCTTTATGGAAATCGAGATCTAATGAACATTGCGCGTAACATGGCTCGTGGACTGAAGGGTGTTGAGAATGTTTACACCCAGCACCAGCCGCTTCTGTTCCAAATCATGGAAAGCATTGTCAAAGGACGGTTGAGAGATGTAGACTACCCATTTGTTGGGAATCACTTTCAACAAGGAAGGCCCCAGGACGTAATTATCTTCATTGTTGGCGGGACAACATATGAAGAGTCACGGTCTGTTGCTCTACAAAATGCCAGTAATACAGGCGTTCGGTTTATACTTGGTGGCTCTTCTGTTCTTAATTCGAAAAGGTTTTTCAGGGACTTGGAAGAAGCTCAGAGGGTAGCTCGTTCTAGCACCTCTGTTGTTTGA
Protein sequence

>Msa0375710

MALTSSARDYINRILQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISKSSEPMSHLKAIYFLRPTSENIQYMRRQLASPRFGEYHLFFSNILKDHHIHLLADSDEQEVVQQVQEYYADFVAIDPYHFTFHMPSNYIYMLPAVVDPSALQRFSDRVVEGLAAVFLTLKRRPVIRYQRTSDIAKRIAHEASKLMYQEESGLFDFRRMEVSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDVKSIGKFPKDQEEVVLSSEQDSFFKANMYENFGDIGMNIKRLVDEFQQVAKSNQNIQTVEDMAKFVDNYPEYRKMHGNVTKHVTLVTEMSKIVEERKLMLVSQTEQELACNGGQGAAFEAVTNLLNNESISDMDRLRLVMLYALRYEKESPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRTGDLYGNRDLMNIARNMARGLKGVENVYTQHQPLLFQIMESIVKGRLRDVDYPFVGNHFQQGRPQDVIIFIVGGTTYEESRSVALQNASNTGVRFILGGSSVLNSKRFFRDLEEAQRVARSSTSVV*