AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0147880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147880 MtrunA17_Chr1g0157341 98.895 543 5 1 1 542 1 543 0.0 1093
Msa0147880 MtrunA17_Chr3g0143671 84.461 547 77 2 1 542 1 544 0.0 966
Msa0147880 MtrunA17_Chr4g0038671 76.667 540 119 2 3 542 11 543 0.0 863
Msa0147880 MtrunA17_Chr4g0024861 74.225 516 133 0 23 538 22 537 0.0 814
Msa0147880 MtrunA17_Chr2g0322441 71.455 536 153 0 2 537 4 539 0.0 789
Msa0147880 MtrunA17_Chr4g0075071 70.336 536 158 1 7 542 11 545 0.0 763
Msa0147880 MtrunA17_Chr4g0024641 70.179 446 132 1 90 535 13 457 0.0 661
Msa0147880 MtrunA17_Chr4g0024641 64.634 82 29 0 457 538 875 956 8.15e-28 118
Msa0147880 MtrunA17_Chr4g0024641 64.557 79 28 0 457 535 503 581 4.03e-26 113
Msa0147880 MtrunA17_Chr4g0024641 64.557 79 28 0 457 535 565 643 4.03e-26 113
Msa0147880 MtrunA17_Chr4g0024641 64.557 79 28 0 457 535 627 705 4.03e-26 113
Msa0147880 MtrunA17_Chr4g0024641 64.557 79 28 0 457 535 689 767 4.03e-26 113
Msa0147880 MtrunA17_Chr4g0024641 64.557 79 28 0 457 535 813 891 4.03e-26 113
Msa0147880 MtrunA17_Chr4g0024641 63.291 79 29 0 457 535 441 519 3.67e-25 110
Msa0147880 MtrunA17_Chr4g0024641 63.291 79 29 0 457 535 751 829 4.63e-25 110
Msa0147880 MtrunA17_Chr8g0374271 60.348 517 202 2 23 538 26 540 0.0 650
Msa0147880 MtrunA17_Chr5g0402831 59.266 518 207 2 21 538 24 537 0.0 625
Msa0147880 MtrunA17_Chr8g0374261 56.415 530 222 5 6 534 13 534 0.0 619
Msa0147880 MtrunA17_Chr4g0043251 56.343 536 222 5 5 532 7 538 0.0 597
Msa0147880 MtrunA17_Chr3g0121151 54.444 540 228 5 1 532 48 577 0.0 577
Msa0147880 MtrunA17_Chr3g0121171 54.444 540 228 5 1 532 583 1112 0.0 577
Msa0147880 MtrunA17_Chr3g0121171 54.259 540 229 5 1 532 1158 1687 0.0 574
Msa0147880 MtrunA17_Chr3g0121171 55.470 521 223 4 20 532 18 537 0.0 573
Msa0147880 MtrunA17_Chr3g0121171 52.593 540 229 6 1 532 1733 2253 6.42e-175 545
Msa0147880 MtrunA17_Chr3g0121161 54.259 540 229 5 1 532 48 577 0.0 574
Msa0147880 MtrunA17_Chr4g0043261 53.510 527 240 4 10 532 7 532 0.0 570
Msa0147880 MtrunA17_Chr4g0056511 51.554 547 244 6 7 533 6 551 0.0 530
Msa0147880 MtrunA17_Chr3g0079321 48.825 553 261 7 1 532 1 552 1.21e-176 511
Msa0147880 MtrunA17_Chr7g0234061 52.174 529 227 10 25 532 26 549 2.22e-175 508
Msa0147880 MtrunA17_Chr1g0197301 47.273 330 171 3 206 532 1 330 6.30e-95 292
Msa0147880 MtrunA17_Chr4g0075781 52.404 208 56 2 132 337 1 167 5.99e-61 198
Msa0147880 MtrunA17_Chr5g0404361 29.806 567 344 18 3 531 61 611 5.15e-59 206
Msa0147880 MtrunA17_Chr5g0404341 28.345 568 352 16 6 531 12 566 1.98e-57 201
Msa0147880 MtrunA17_Chr5g0436461 26.964 560 360 12 10 531 6 554 6.43e-57 199
Msa0147880 MtrunA17_Chr3g0104061 30.237 506 308 15 28 497 26 522 1.31e-54 193
Msa0147880 MtrunA17_Chr5g0429511 27.119 531 343 14 1 497 4 524 2.30e-51 184
Msa0147880 MtrunA17_Chr3g0118321 27.692 585 338 25 5 532 7 563 1.17e-50 182
Msa0147880 MtrunA17_Chr4g0005921 27.639 521 345 12 22 511 18 537 2.09e-48 176
Msa0147880 MtrunA17_Chr8g0382691 26.910 576 327 18 23 536 29 572 3.33e-47 173
Msa0147880 MtrunA17_Chr1g0197311 37.247 247 112 5 3 210 1 243 6.19e-45 159
Msa0147880 MtrunA17_Chr7g0237441 26.117 582 364 17 1 531 14 580 6.44e-45 167
Msa0147880 MtrunA17_Chr3g0118331 26.541 584 346 23 9 537 11 566 4.01e-42 159
Msa0147880 MtrunA17_Chr3g0114211 27.551 490 307 14 49 497 54 536 9.15e-42 158
Msa0147880 MtrunA17_Chr5g0431581 26.132 574 358 16 7 531 4 560 4.49e-41 155
Msa0147880 MtrunA17_Chr7g0237491 26.871 521 323 18 28 497 33 546 7.10e-41 155
Msa0147880 MtrunA17_Chr8g0346581 25.414 543 361 14 3 504 5 544 7.25e-41 155
Msa0147880 MtrunA17_Chr7g0240991 29.225 503 303 20 42 496 39 536 1.42e-39 152
Msa0147880 MtrunA17_Chr7g0238981 25.720 521 328 15 28 497 47 559 5.44e-39 150
Msa0147880 MtrunA17_Chr7g0238351 26.095 548 338 18 8 497 9 547 1.29e-38 149
Msa0147880 MtrunA17_Chr7g0238941 25.439 570 372 17 11 531 13 578 1.35e-38 149
Msa0147880 MtrunA17_Chr5g0437681 25.852 499 316 14 46 497 42 533 1.48e-38 149
Msa0147880 MtrunA17_Chr2g0278811 26.306 555 331 18 49 531 59 607 2.86e-37 145
Msa0147880 MtrunA17_Chr4g0031901 25.000 540 359 17 2 497 14 551 1.84e-36 143
Msa0147880 MtrunA17_Chr7g0240971 26.508 547 329 18 1 491 1 530 2.60e-36 142
Msa0147880 MtrunA17_Chr4g0024651 90.323 62 6 0 23 84 22 83 8.91e-34 124
Msa0147880 MtrunA17_Chr4g0008521 24.954 549 357 15 32 531 30 572 2.82e-29 122
Msa0147880 MtrunA17_Chr3g0118351 21.937 351 213 10 231 537 5 338 3.94e-18 85.9
Msa0147880 MtrunA17_Chr3g0118341 35.526 152 87 7 28 173 26 172 7.30e-18 82.4
Msa0147880 MtrunA17_Chr3g0133871 28.436 211 144 5 6 214 13 218 1.33e-17 82.0
Msa0147880 MtrunA17_Chr3g0133861 26.518 313 179 12 225 497 5 306 3.68e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147880 AT1G76160.1 84.310 529 78 2 14 542 18 541 0.0 928
Msa0147880 AT1G41830.1 81.041 538 96 2 5 542 11 542 0.0 911
Msa0147880 AT1G21850.1 78.137 526 113 2 14 539 15 538 0.0 861
Msa0147880 AT1G21860.1 73.913 529 135 3 10 538 12 537 0.0 828
Msa0147880 AT4G22010.1 71.241 532 152 1 12 542 10 541 0.0 795
Msa0147880 AT4G38420.1 67.890 545 169 3 3 541 5 549 0.0 760
Msa0147880 AT4G28090.1 62.454 538 186 7 12 538 9 541 0.0 689
Msa0147880 AT5G66920.1 59.266 518 209 1 21 538 30 545 0.0 651
Msa0147880 AT4G38420.3 66.247 477 155 3 3 473 5 481 0.0 639
Msa0147880 AT1G55570.1 56.410 546 225 5 1 537 5 546 0.0 607
Msa0147880 AT4G38420.2 66.444 450 145 3 3 446 5 454 0.0 601
Msa0147880 AT3G13390.1 58.046 522 209 4 24 536 24 544 0.0 591
Msa0147880 AT3G13400.2 54.833 538 234 4 7 536 6 542 0.0 585
Msa0147880 AT3G13400.1 54.833 538 234 4 7 536 6 542 0.0 585
Msa0147880 AT1G55560.1 54.089 538 238 4 7 536 5 541 0.0 582
Msa0147880 AT4G37160.1 54.802 531 233 4 14 542 16 541 0.0 581
Msa0147880 AT2G23630.2 55.682 528 231 2 13 540 20 544 0.0 579
Msa0147880 AT2G23630.1 55.682 528 231 2 13 540 15 539 0.0 579
Msa0147880 AT5G48450.1 51.763 539 246 9 7 533 8 544 0.0 548
Msa0147880 AT5G48450.2 51.571 541 248 9 7 535 8 546 0.0 548
Msa0147880 AT4G12420.1 50.906 552 247 8 1 532 1 548 0.0 535
Msa0147880 AT4G12420.2 50.906 552 247 8 1 532 1 548 0.0 535
Msa0147880 AT5G51480.1 50.000 530 244 8 23 532 23 551 0.0 526
Msa0147880 AT1G75790.1 50.462 541 252 5 10 534 4 544 0.0 521
Msa0147880 AT4G25240.2 50.000 552 255 8 1 532 1 551 1.74e-178 516
Msa0147880 AT4G25240.1 50.000 552 255 8 1 532 1 551 1.74e-178 516
Msa0147880 AT4G37160.2 55.172 435 192 3 14 446 16 449 2.30e-167 482
Msa0147880 AT4G39830.1 27.698 556 336 14 2 504 13 555 5.89e-56 197
Msa0147880 AT5G21105.1 27.148 582 336 19 12 532 22 576 1.08e-53 191
Msa0147880 AT5G58910.2 28.785 535 328 16 7 497 8 533 3.53e-53 190
Msa0147880 AT2G38080.1 27.357 541 357 13 23 531 22 558 1.53e-52 188
Msa0147880 AT5G58910.3 28.785 535 327 17 7 497 8 532 1.58e-51 185
Msa0147880 AT5G21105.3 27.829 539 306 18 12 489 22 538 1.88e-51 184
Msa0147880 AT5G21100.1 27.143 560 323 19 32 532 28 561 3.90e-50 181
Msa0147880 AT5G03260.1 27.641 568 354 17 5 531 6 557 4.84e-50 181
Msa0147880 AT5G01190.1 27.087 539 353 12 28 531 25 558 1.39e-48 177
Msa0147880 AT5G01190.2 27.237 514 342 11 49 531 32 544 4.87e-47 172
Msa0147880 AT5G58910.1 29.472 492 288 16 49 497 14 489 6.12e-46 169
Msa0147880 AT4G39830.3 27.549 461 272 12 96 504 8 458 4.58e-40 152
Msa0147880 AT4G39830.2 27.549 461 272 12 96 504 10 460 6.29e-40 152
Msa0147880 AT2G29130.1 26.335 543 343 17 2 496 5 538 9.04e-40 152
Msa0147880 AT2G30210.1 27.108 498 308 16 46 496 46 535 1.05e-39 152
Msa0147880 AT2G46570.1 23.757 543 357 14 28 525 32 562 4.60e-39 150
Msa0147880 AT5G05390.1 27.054 499 313 14 42 497 41 531 6.88e-39 150
Msa0147880 AT3G09220.1 26.365 531 340 14 1 491 8 527 3.52e-38 148
Msa0147880 AT5G48100.1 26.800 500 318 16 49 505 43 537 1.17e-37 146
Msa0147880 AT1G18140.1 24.952 525 333 17 28 497 29 547 2.44e-36 143
Msa0147880 AT5G09360.1 26.136 528 344 16 7 496 15 534 2.58e-36 142
Msa0147880 AT5G01040.1 27.435 503 300 17 39 491 39 526 3.41e-36 142
Msa0147880 AT5G01050.1 26.335 543 341 17 39 533 39 570 3.97e-36 142
Msa0147880 AT4G39830.4 26.681 461 263 12 96 504 10 447 2.26e-35 139
Msa0147880 AT2G40370.1 23.850 587 384 15 1 531 1 580 6.29e-35 139
Msa0147880 AT5G21105.2 27.720 386 231 12 173 532 22 385 2.51e-34 134
Msa0147880 AT5G07130.1 24.955 553 333 18 14 504 10 542 5.66e-34 136
Msa0147880 AT2G46570.2 24.017 483 316 15 85 525 4 477 5.78e-30 123
Msa0147880 AT3G09220.2 25.814 430 278 11 101 491 3 430 1.96e-26 112
Msa0147880 AT5G60020.1 25.846 325 206 7 1 306 1 309 1.82e-25 110
Msa0147880 AT5G60020.2 25.846 325 206 7 1 306 1 309 1.88e-25 110
Msa0147880 AT5G60020.3 26.568 271 179 5 49 306 14 277 2.87e-24 107
Msa0147880 AT5G07130.2 24.790 476 276 18 91 504 2 457 3.54e-23 103
Msa0147880 AT5G07130.3 24.790 476 276 18 91 504 2 457 3.54e-23 103

Find 193 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAACTTGAGGTCAGAATTT+TGG 0.153063 1_4:-7991163 Msa0147880:CDS
CACAAAGCTGCTGGTGGTTT+TGG 0.164848 1_4:-7992556 Msa0147880:CDS
GAAGGATGTCTTCGTCATTT+TGG 0.174286 1_4:+7991470 None:intergenic
TGCTGTCAGGTTTGTCCTAA+TGG 0.243582 1_4:+7991780 None:intergenic
AAATTTGGGAAGATTATAAA+TGG 0.246075 1_4:+7990709 None:intergenic
AACTCTGCAGGTCCAGTTTC+AGG 0.260810 1_4:-7991859 Msa0147880:CDS
ATGTTACAGGAAAGACTTAC+AGG 0.284854 1_4:-7992128 Msa0147880:intron
GGCTACTCTTTCTTTGTTGT+TGG 0.288891 1_4:-7991430 Msa0147880:CDS
TTCTATTATTTCCCATCTCT+TGG 0.289041 1_4:-7992583 Msa0147880:CDS
AGTTCAGCTGGACAAGTTAA+TGG 0.296097 1_4:-7991682 Msa0147880:CDS
AAACAGAAACAATATATTAT+AGG 0.304757 1_4:-7990738 Msa0147880:three_prime_UTR
CCACAAAGTAATGCATTCTT+AGG 0.312465 1_4:+7991062 None:intergenic
GACAATGGACAAGTGATAAA+AGG 0.313235 1_4:-7991286 Msa0147880:CDS
CGTATGAGTTCCTTCTTTGC+TGG 0.315087 1_4:+7992692 None:intergenic
GGTGATTACACTGTCCTTAT+TGG 0.319377 1_4:-7992478 Msa0147880:CDS
GGTTCAAGGACCAATCAATT+TGG 0.323811 1_4:+7991812 None:intergenic
AGTAATGCATTCTTAGGAAT+AGG 0.325123 1_4:+7991068 None:intergenic
GGTCTATCAGAGATGCTTCC+AGG 0.328166 1_4:+7991565 None:intergenic
TTACTTTGTGGTAGGGCAAC+TGG 0.340111 1_4:-7991050 Msa0147880:CDS
TCGAAGGGAACTGGAATTCT+TGG 0.348615 1_4:+7992511 None:intergenic
CCGCAAGGATCATACCATTA+TGG 0.358471 1_4:-7991739 Msa0147880:CDS
GATCCTTGCGGGTTTGGTCT+TGG 0.363379 1_4:+7991751 None:intergenic
GCTACTCTTTCTTTGTTGTT+GGG 0.364251 1_4:-7991429 Msa0147880:intron
ATTGATGCTGTGTTGGTTGA+TGG 0.370387 1_4:-7990822 Msa0147880:three_prime_UTR
CCTAAGAATGCATTACTTTG+TGG 0.376644 1_4:-7991062 Msa0147880:CDS
AAGAAGTCAGCCAGCTTAAG+AGG 0.378912 1_4:+7991610 None:intergenic
TCCACTTGGTGTTCGCCAAC+AGG 0.379493 1_4:-7993696 Msa0147880:intron
GTCTTGGTCCACTTGCTGTC+AGG 0.380810 1_4:+7991767 None:intergenic
CATAATGGTATGATCCTTGC+GGG 0.382551 1_4:+7991740 None:intergenic
CTTCAGAGCTATCATCTTGA+TGG 0.384388 1_4:-7991451 Msa0147880:CDS
TGAACCAAGCCCGCTCCATT+AGG 0.386633 1_4:-7991795 Msa0147880:CDS
CTTCAAGTGAAAGATCAAAT+TGG 0.388160 1_4:-7992610 Msa0147880:CDS
TGGTATGATCCTTGCGGGTT+TGG 0.392790 1_4:+7991745 None:intergenic
CAAAACCACCAGCAGCTTTG+TGG 0.393298 1_4:+7992557 None:intergenic
CTTATCAACGGTCGTGGGTC+TGG 0.394443 1_4:-7992283 Msa0147880:CDS
TCATACGAAGATGGAGTGTT+TGG 0.398452 1_4:-7992676 Msa0147880:CDS
GTTGCTGTAGCGAAGAATTC+CGG 0.398646 1_4:+7991879 None:intergenic
CTTGTTTCCGTTATCAAGTT+GGG 0.404501 1_4:+7992327 None:intergenic
AAGGTCTATATCATATCAAA+TGG 0.405553 1_4:+7993948 None:intergenic
ATGTATGTAAAGTTCTTTCC+AGG 0.413929 1_4:+7992634 None:intergenic
ATCCATACAGGTTCTTCAAC+TGG 0.414214 1_4:-7993742 Msa0147880:CDS
GTAATGCATTCTTAGGAATA+GGG 0.417767 1_4:+7991069 None:intergenic
ATTTGGATGGTGGGTCCACC+AGG 0.418556 1_4:+7991829 None:intergenic
TTGTCCTAATGGAGCGGGCT+TGG 0.419822 1_4:+7991791 None:intergenic
TTAAGTTTATCATGCCATAA+TGG 0.419861 1_4:+7991725 None:intergenic
GAATGTCTGGTCCTGGGAAT+TGG 0.420914 1_4:+7993536 None:intergenic
AATGGAGCGGGCTTGGTTCA+AGG 0.421159 1_4:+7991798 None:intergenic
GCGGGATCATCGAAGGGAAC+TGG 0.422110 1_4:+7992502 None:intergenic
AAATGGGAAGGGAAGGGAAG+AGG 0.427971 1_4:+7993925 None:intergenic
CTGGAATTCTTGGCCTACTT+AGG 0.428217 1_4:+7992521 None:intergenic
TAGAATATCAAATGTGGGAT+TGG 0.430691 1_4:-7992103 Msa0147880:CDS
GCCAGCTTAAGAGGAGTATC+GGG 0.437831 1_4:+7991619 None:intergenic
AAGTTCTTTCCAGGTGGAAT+GGG 0.445944 1_4:+7992643 None:intergenic
ACTTGTACCAGTCACCAATA+AGG 0.447264 1_4:+7992464 None:intergenic
GTTCAGCTGGACAAGTTAAT+GGG 0.447873 1_4:-7991681 Msa0147880:CDS
CAAGGGAGGAGTAGGTGGTT+TGG 0.449186 1_4:+7992010 None:intergenic
ATTAATTATTGATGCTGTGT+TGG 0.450071 1_4:-7990829 Msa0147880:three_prime_UTR
AGCCAGCTTAAGAGGAGTAT+CGG 0.452171 1_4:+7991618 None:intergenic
TAGATAGCAGTCCATGACTT+TGG 0.469788 1_4:+7991212 None:intergenic
AGTTATCTAGCTTCTTCACT+TGG 0.472061 1_4:-7993877 Msa0147880:five_prime_UTR
TATTATGTGACAGGATTTGA+AGG 0.472072 1_4:-7992350 Msa0147880:intron
AATAAATAAATGGGAAGGGA+AGG 0.472534 1_4:+7993918 None:intergenic
TGGATGGTGGGTCCACCAGG+GGG 0.473394 1_4:+7991832 None:intergenic
GACCCACCATCCAAATTGAT+TGG 0.477439 1_4:-7991822 Msa0147880:CDS
CAGTGAAATGGCACTGAACT+TGG 0.480159 1_4:-7993822 Msa0147880:exon
CTTGGATTCCACAAAGCTGC+TGG 0.481877 1_4:-7992565 Msa0147880:CDS
TTCATTCATTCATTCATTTG+AGG 0.483019 1_4:-7993848 Msa0147880:five_prime_UTR
TTTGTCACAGAATGAATGTC+TGG 0.484656 1_4:+7993523 None:intergenic
CAGGTTTGTCCTAATGGAGC+GGG 0.488484 1_4:+7991786 None:intergenic
AAAGTTCTTTCCAGGTGGAA+TGG 0.489538 1_4:+7992642 None:intergenic
TTGAAGGCCCAACTTGATAA+CGG 0.491854 1_4:-7992334 Msa0147880:CDS
CCCCGATACTCCTCTTAAGC+TGG 0.492307 1_4:-7991620 Msa0147880:CDS
CCGTTGATAAGAATTCCATC+AGG 0.493378 1_4:+7992295 None:intergenic
ACTTGTTTCCGTTATCAAGT+TGG 0.493576 1_4:+7992326 None:intergenic
CATTTGAGGAGGCAGTGAAA+TGG 0.494458 1_4:-7993834 Msa0147880:exon
ATTCCGGTGGAGGTGAGTAC+AGG 0.496771 1_4:+7991895 None:intergenic
CTCCTCCCTTGACGTTCACG+TGG 0.496861 1_4:-7991998 Msa0147880:CDS
GTGGTAGCTAAGTCATCAAA+GGG 0.499590 1_4:+7991013 None:intergenic
ACACTGTCCTTATTGGTGAC+TGG 0.500102 1_4:-7992471 Msa0147880:CDS
TTAACAATAAATAAATGGGA+AGG 0.500743 1_4:+7993913 None:intergenic
ACAGAATGAATGTCTGGTCC+TGG 0.504301 1_4:+7993529 None:intergenic
ATAGCAGGTGTTTACCGTCC+TGG 0.506103 1_4:-7991583 Msa0147880:CDS
GCACCGCACAGCACATGGCC+AGG 0.506372 1_4:+7993971 None:intergenic
ACTAACCATGAAATGAGAAA+AGG 0.507335 1_4:+7993460 None:intergenic
GGAATGGAGTCCAGCAAAGA+AGG 0.507749 1_4:-7992702 Msa0147880:CDS
TTCCAGTTGAAGAACCTGTA+TGG 0.507790 1_4:+7993740 None:intergenic
GGGAGGAGTAGGTGGTTTGG+AGG 0.508210 1_4:+7992013 None:intergenic
TATCAATGTCTTCAACAGCT+TGG 0.512023 1_4:-7993488 Msa0147880:CDS
AGAATATGTGACCTCGAGTA+GGG 0.513238 1_4:+7990772 None:intergenic
GGAATTCTTATCAACGGTCG+TGG 0.513900 1_4:-7992289 Msa0147880:CDS
AGAATGCATTACTTTGTGGT+AGG 0.515449 1_4:-7991058 Msa0147880:CDS
CTGCGTCTCTAAGATTGTAC+TGG 0.516471 1_4:+7991261 None:intergenic
TTGGATGGTGGGTCCACCAG+GGG 0.516542 1_4:+7991831 None:intergenic
CAAGATGAAGCTGGTAGAAG+TGG 0.521035 1_4:-7992049 Msa0147880:CDS
AACAAGTTACCTTTCCCTGA+TGG 0.521178 1_4:-7992310 Msa0147880:CDS
GCACAGCACATGGCCAGGAA+TGG 0.523227 1_4:+7993976 None:intergenic
GAGGAATTAGAATCCTAAGT+AGG 0.523452 1_4:-7992534 Msa0147880:CDS
GCTGACTTCTTCAAGATAGC+AGG 0.524240 1_4:-7991598 Msa0147880:CDS
TTCAACTGGAACGTTACCTA+TGG 0.528833 1_4:-7993728 Msa0147880:CDS
TTTGGATGGTGGGTCCACCA+GGG 0.529837 1_4:+7991830 None:intergenic
TTGTTGCTGAAGATCCATAC+AGG 0.530698 1_4:-7993754 Msa0147880:CDS
GAATGCATTACTTTGTGGTA+GGG 0.534147 1_4:-7991057 Msa0147880:CDS
GGATTCCACAAAGCTGCTGG+TGG 0.534304 1_4:-7992562 Msa0147880:CDS
GGAGGAGTAGGTGGTTTGGA+GGG 0.534506 1_4:+7992014 None:intergenic
CTTATCAATGGCCAATTCCC+AGG 0.536067 1_4:-7993547 Msa0147880:CDS
CTTCGCTACAGCAACTCTGC+AGG 0.536476 1_4:-7991871 Msa0147880:CDS
ATGATTAGTTACCGTGTGGT+TGG 0.536620 1_4:+7992441 None:intergenic
TTTGGGCACGACAATATCTC+GGG 0.539491 1_4:-7991145 Msa0147880:CDS
GGGAAGGGAAGGGAAGAGGA+AGG 0.539589 1_4:+7993929 None:intergenic
TATGGTGACATTTATCCACT+TGG 0.540771 1_4:-7993710 Msa0147880:CDS
TAACAATAAATAAATGGGAA+GGG 0.545582 1_4:+7993914 None:intergenic
CATCAAGATGATAGCTCTGA+AGG 0.545903 1_4:+7991452 None:intergenic
TATGTTGCACTTGACAATGT+AGG 0.546497 1_4:-7991191 Msa0147880:CDS
ATTGTACTATCAAGTTCAGC+TGG 0.548639 1_4:-7991694 Msa0147880:CDS
TCTGATAGACCTAGTGGTGG+TGG 0.549192 1_4:-7991553 Msa0147880:CDS
ATCAACGGTCGTGGGTCTGG+AGG 0.551590 1_4:-7992280 Msa0147880:CDS
AAGAATATGTGACCTCGAGT+AGG 0.553572 1_4:+7990771 None:intergenic
ATCACCAGCGGGATCATCGA+AGG 0.554567 1_4:+7992495 None:intergenic
CAGGCTTAGAATATCAAATG+TGG 0.556229 1_4:-7992109 Msa0147880:CDS
AGCAACAATAGTAGTGGTGA+TGG 0.560452 1_4:+7993769 None:intergenic
AGAAGGAACTCATACGAAGA+TGG 0.560891 1_4:-7992685 Msa0147880:CDS
GACCAATCAATTTGGATGGT+GGG 0.562075 1_4:+7991820 None:intergenic
CAGAATGAATGTCTGGTCCT+GGG 0.565547 1_4:+7993530 None:intergenic
GCTTTGTGGAATCCAAGAGA+TGG 0.565601 1_4:+7992571 None:intergenic
AATCCTGTACTCACCTCCAC+CGG 0.565757 1_4:-7991898 Msa0147880:CDS
TGTGGTAGCTAAGTCATCAA+AGG 0.567992 1_4:+7991012 None:intergenic
CAAGGACCAATCAATTTGGA+TGG 0.569010 1_4:+7991816 None:intergenic
CCTGATGGAATTCTTATCAA+CGG 0.571020 1_4:-7992295 Msa0147880:CDS
AGGTCTATATCATATCAAAT+GGG 0.572427 1_4:+7993949 None:intergenic
AGGACAAACCTGACAGCAAG+TGG 0.574032 1_4:-7991775 Msa0147880:CDS
ATGCAGGGAATACTTATCAA+TGG 0.575154 1_4:-7993559 Msa0147880:intron
GTGAACGTCAAGGGAGGAGT+AGG 0.576942 1_4:+7992002 None:intergenic
ATTCATTCATTCATTTGAGG+AGG 0.577066 1_4:-7993845 Msa0147880:five_prime_UTR
CTAGTAACCGCGGATCAACC+TGG 0.581592 1_4:-7991958 Msa0147880:CDS
GTAGGATTGATTCATGTATG+TGG 0.581664 1_4:+7990994 None:intergenic
GGACCAATCAATTTGGATGG+TGG 0.582450 1_4:+7991819 None:intergenic
CTCAGGTATATCCAAAGTCA+TGG 0.583355 1_4:-7991223 Msa0147880:CDS
ATAAATAAATGGGAAGGGAA+GGG 0.583722 1_4:+7993919 None:intergenic
GTAGCGAAGAATTCCGGTGG+AGG 0.585607 1_4:+7991885 None:intergenic
ACAACATGTCCCATTCCACC+TGG 0.586121 1_4:-7992652 Msa0147880:CDS
CTTTGTGGAATCCAAGAGAT+GGG 0.586569 1_4:+7992572 None:intergenic
ACCTGTTGGCGAACACCAAG+TGG 0.587332 1_4:+7993695 None:intergenic
GTTCCCTTCGATGATCCCGC+TGG 0.588900 1_4:-7992499 Msa0147880:CDS
ATGTAGGAATGTGGAACTTG+AGG 0.589636 1_4:-7991175 Msa0147880:CDS
ACAGAATCACAAGATGAAGC+TGG 0.591529 1_4:-7992058 Msa0147880:CDS
AGGCTTAGAATATCAAATGT+GGG 0.595758 1_4:-7992108 Msa0147880:CDS
AATGGGCACCGCACAGCACA+TGG 0.597172 1_4:+7993966 None:intergenic
TTGACCCACGTGAACGTCAA+GGG 0.599164 1_4:+7991993 None:intergenic
AATGTTGCATGCAGTATGGA+TGG 0.602475 1_4:-7991311 Msa0147880:intron
ATAAGAATTCCATCAGGGAA+AGG 0.603702 1_4:+7992301 None:intergenic
TCAGGTTTGTCCTAATGGAG+CGG 0.604135 1_4:+7991785 None:intergenic
AATAAAAGAAGAAGCAGACA+AGG 0.604863 1_4:+7990866 None:intergenic
AAGTGGATAAATGTCACCAT+AGG 0.607359 1_4:+7993712 None:intergenic
AGGACAGTGTAATCACCAGC+GGG 0.611484 1_4:+7992484 None:intergenic
CCATAATGGTATGATCCTTG+CGG 0.613798 1_4:+7991739 None:intergenic
AACGTCAAGGGAGGAGTAGG+TGG 0.614850 1_4:+7992005 None:intergenic
TCATCTCTCAATGTGGAGCA+AGG 0.615730 1_4:-7992256 Msa0147880:intron
ATCTTCAGCAACAATAGTAG+TGG 0.622735 1_4:+7993763 None:intergenic
AGATAAATACCACCACCACT+AGG 0.622790 1_4:+7991544 None:intergenic
TACAGGATTTGTAAATCGAG+AGG 0.631697 1_4:+7991912 None:intergenic
ATTGACCCACGTGAACGTCA+AGG 0.633112 1_4:+7991992 None:intergenic
GAATTCTTATCAACGGTCGT+GGG 0.635498 1_4:-7992288 Msa0147880:CDS
GCAGTATGGATGGAGGACAA+TGG 0.636774 1_4:-7991301 Msa0147880:intron
ATGAAGCTGGTAGAAGTGGA+AGG 0.637021 1_4:-7992045 Msa0147880:CDS
TCCTCCCTTGACGTTCACGT+GGG 0.641683 1_4:-7991997 Msa0147880:CDS
TAGTAGTGGTGATGGCAAAG+AGG 0.643447 1_4:+7993777 None:intergenic
ATCTCTGATAGACCTAGTGG+TGG 0.645124 1_4:-7991556 Msa0147880:CDS
TATGTAAAGTTCTTTCCAGG+TGG 0.645224 1_4:+7992637 None:intergenic
AGTTTCGCGTTCCACCACTC+AGG 0.647895 1_4:-7991240 Msa0147880:CDS
GGACCAAGACCAAACCCGCA+AGG 0.650703 1_4:-7991754 Msa0147880:CDS
TCACCAGCGGGATCATCGAA+GGG 0.652297 1_4:+7992496 None:intergenic
CTGGTACAAGTCCAACCACA+CGG 0.653969 1_4:-7992452 Msa0147880:intron
CACTTGACAATGTAGGAATG+TGG 0.655047 1_4:-7991184 Msa0147880:CDS
TATCAGAGATGCTTCCAGGA+CGG 0.660561 1_4:+7991569 None:intergenic
CGTTGATAAGAATTCCATCA+GGG 0.660738 1_4:+7992296 None:intergenic
GTCTTGACCAGGTTGATCCG+CGG 0.661746 1_4:+7991951 None:intergenic
ACAATATAATAGTCTTGACC+AGG 0.663963 1_4:+7991940 None:intergenic
TGGAGGATCATCTCTCAATG+TGG 0.668048 1_4:-7992263 Msa0147880:CDS
GAATATGTGACCTCGAGTAG+GGG 0.672475 1_4:+7990773 None:intergenic
AGCATCTCTGATAGACCTAG+TGG 0.673066 1_4:-7991559 Msa0147880:CDS
CTATAAATGACCCCTACTCG+AGG 0.675706 1_4:-7990783 Msa0147880:three_prime_UTR
CCAGCTTAAGAGGAGTATCG+GGG 0.687155 1_4:+7991620 None:intergenic
ACCCACGTGAACGTCAAGGG+AGG 0.690184 1_4:+7991996 None:intergenic
AAGGACAGTGTAATCACCAG+CGG 0.694966 1_4:+7992483 None:intergenic
GCTGTAGCGAAGAATTCCGG+TGG 0.700350 1_4:+7991882 None:intergenic
CTTTGGATATACCTGAGTGG+TGG 0.703031 1_4:+7991229 None:intergenic
ATACTCAGTTCTAGTAACCG+CGG 0.703123 1_4:-7991968 Msa0147880:CDS
CAGCTTAAGAGGAGTATCGG+GGG 0.703277 1_4:+7991621 None:intergenic
ATTCCTGGCCATGTGCTGTG+CGG 0.713678 1_4:-7993974 Msa0147880:five_prime_UTR
GTTGCATGCAGTATGGATGG+AGG 0.723579 1_4:-7991308 Msa0147880:intron
ATGGCATGATAAACTTAACG+AGG 0.737321 1_4:-7991720 Msa0147880:CDS
TGACTTTGGATATACCTGAG+TGG 0.778186 1_4:+7991226 None:intergenic
TGGTAGCTAAGTCATCAAAG+GGG 0.778305 1_4:+7991014 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTTAACAATAAATAAA+TGG + chr1_4:7990821-7990840 None:intergenic 10.0%
!!! TCTTTTTATATTCATTTATA+TGG - chr1_4:7991654-7991673 Msa0147880:CDS 10.0%
!!! TTTTTTTTTGAAATAATACT+TGG - chr1_4:7993764-7993783 Msa0147880:CDS 10.0%
!! CAAAAATAACAAATTAAGTT+TGG + chr1_4:7991139-7991158 None:intergenic 15.0%
!! TTTATTATTAATCAATTGCA+AGG + chr1_4:7991978-7991997 None:intergenic 15.0%
!!! ATTCTTTCTTTTCTTTTTTT+GGG + chr1_4:7993820-7993839 None:intergenic 15.0%
!!! TATTCTTTCTTTTCTTTTTT+TGG + chr1_4:7993821-7993840 None:intergenic 15.0%
!! AAACAGAAACAATATATTAT+AGG - chr1_4:7993988-7994007 Msa0147880:five_prime_UTR 15.0%
!! TAACAATAAATAAATGGGAA+GGG + chr1_4:7990815-7990834 None:intergenic 20.0%
!! TTAACAATAAATAAATGGGA+AGG + chr1_4:7990816-7990835 None:intergenic 20.0%
!! TGAAATATAAATATACCTGT+TGG + chr1_4:7991048-7991067 None:intergenic 20.0%
!! ATATGATGAATATGAAGATA+TGG + chr1_4:7991430-7991449 None:intergenic 20.0%
!! TATATTCATTTATATGGAGA+TGG - chr1_4:7991660-7991679 Msa0147880:CDS 20.0%
!! ATTCCAAATTAAGTAGTAAT+TGG - chr1_4:7991714-7991733 Msa0147880:CDS 20.0%
!! AAAGCATGAATAAAGTAAAT+GGG + chr1_4:7991818-7991837 None:intergenic 20.0%
!! AAGTGAAATAGTAGTATATT+AGG - chr1_4:7991888-7991907 Msa0147880:CDS 20.0%
!! AGTGAAATAGTAGTATATTA+GGG - chr1_4:7991889-7991908 Msa0147880:CDS 20.0%
!! CACAATAATTTAAAAAGTAG+TGG + chr1_4:7991921-7991940 None:intergenic 20.0%
!!! GACTCATATAATTTTTCATT+TGG - chr1_4:7992516-7992535 Msa0147880:CDS 20.0%
!!! TTGACACAACTAATATTTTT+TGG - chr1_4:7992563-7992582 Msa0147880:CDS 20.0%
! AGGTCTATATCATATCAAAT+GGG + chr1_4:7990780-7990799 None:intergenic 25.0%
! AAGGTCTATATCATATCAAA+TGG + chr1_4:7990781-7990800 None:intergenic 25.0%
! TTCATTCATTCATTCATTTG+AGG - chr1_4:7990878-7990897 Msa0147880:three_prime_UTR 25.0%
! AAAATGATTCAGATCCAATA+AGG + chr1_4:7991085-7991104 None:intergenic 25.0%
! GATGAAAAAAGAAATGTGAA+AGG + chr1_4:7991297-7991316 None:intergenic 25.0%
!! TGTTATTTACACATAGATAG+AGG + chr1_4:7991328-7991347 None:intergenic 25.0%
!! TATAGTATGTGTGTTTTGTA+AGG + chr1_4:7991553-7991572 None:intergenic 25.0%
!!! CCTCAAAAGTCTTTTTAATT+GGG - chr1_4:7991787-7991806 Msa0147880:CDS 25.0%
! AAGCATGAATAAAGTAAATG+GGG + chr1_4:7991817-7991836 None:intergenic 25.0%
! CAAAGCATGAATAAAGTAAA+TGG + chr1_4:7991819-7991838 None:intergenic 25.0%
! AGATAATTAGCTCAATTTGA+TGG + chr1_4:7991860-7991879 None:intergenic 25.0%
! ACTACTATTTCACTTAATCA+AGG + chr1_4:7991883-7991902 None:intergenic 25.0%
! AAATAGTAGTATATTAGGGT+AGG - chr1_4:7991893-7991912 Msa0147880:CDS 25.0%
! AATAGTAGTATATTAGGGTA+GGG - chr1_4:7991894-7991913 Msa0147880:CDS 25.0%
! TAATAAATGATGACATGACA+TGG - chr1_4:7991991-7992010 Msa0147880:CDS 25.0%
! ATTGTATTGTATTATGTGAC+AGG - chr1_4:7992367-7992386 Msa0147880:intron 25.0%
!!! TATATGAGTCTTATTCATGT+AGG + chr1_4:7992506-7992525 None:intergenic 25.0%
! CAAATTTAGTACTAATGTTG+AGG + chr1_4:7992546-7992565 None:intergenic 25.0%
! TTAAGTTTATCATGCCATAA+TGG + chr1_4:7993004-7993023 None:intergenic 25.0%
! CTATATATATATGTGTGTGA+TGG + chr1_4:7993336-7993355 None:intergenic 25.0%
! ATTAATTATTGATGCTGTGT+TGG - chr1_4:7993897-7993916 Msa0147880:five_prime_UTR 25.0%
ATAAATAAATGGGAAGGGAA+GGG + chr1_4:7990810-7990829 None:intergenic 30.0%
AATAAATAAATGGGAAGGGA+AGG + chr1_4:7990811-7990830 None:intergenic 30.0%
ATTCATTCATTCATTTGAGG+AGG - chr1_4:7990881-7990900 Msa0147880:three_prime_UTR 30.0%
CTTTCATCCTTATACCTTAT+TGG - chr1_4:7991068-7991087 Msa0147880:CDS 30.0%
TTCAGATCCAATAAGGTATA+AGG + chr1_4:7991078-7991097 None:intergenic 30.0%
ACTAACCATGAAATGAGAAA+AGG + chr1_4:7991269-7991288 None:intergenic 30.0%
!!! ATTTTGGGATGTTTGTTTGT+TGG - chr1_4:7991473-7991492 Msa0147880:CDS 30.0%
!!! TTTTGGGATGTTTGTTTGTT+GGG - chr1_4:7991474-7991493 Msa0147880:CDS 30.0%
TGGCCAATTACTACTTAATT+TGG + chr1_4:7991720-7991739 None:intergenic 30.0%
!!! ATTAAAAAGACTTTTGAGGC+AGG + chr1_4:7991786-7991805 None:intergenic 30.0%
! GCCTCAAAAGTCTTTTTAAT+TGG - chr1_4:7991786-7991805 Msa0147880:CDS 30.0%
! CCCAATTAAAAAGACTTTTG+AGG + chr1_4:7991790-7991809 None:intergenic 30.0%
!! CAAAAGTCTTTTTAATTGGG+TGG - chr1_4:7991790-7991809 Msa0147880:CDS 30.0%
ATGTATGTAAAGTTCTTTCC+AGG + chr1_4:7992095-7992114 None:intergenic 30.0%
CTTCAAGTGAAAGATCAAAT+TGG - chr1_4:7992116-7992135 Msa0147880:CDS 30.0%
TTCTATTATTTCCCATCTCT+TGG - chr1_4:7992143-7992162 Msa0147880:intron 30.0%
TATTATGTGACAGGATTTGA+AGG - chr1_4:7992376-7992395 Msa0147880:intron 30.0%
AGGCTTAGAATATCAAATGT+GGG - chr1_4:7992618-7992637 Msa0147880:CDS 30.0%
TAGAATATCAAATGTGGGAT+TGG - chr1_4:7992623-7992642 Msa0147880:CDS 30.0%
! ACAATATAATAGTCTTGACC+AGG + chr1_4:7992789-7992808 None:intergenic 30.0%
TGCATGCAACATTCATATAT+AGG + chr1_4:7993408-7993427 None:intergenic 30.0%
GTAATGCATTCTTAGGAATA+GGG + chr1_4:7993660-7993679 None:intergenic 30.0%
AGTAATGCATTCTTAGGAAT+AGG + chr1_4:7993661-7993680 None:intergenic 30.0%
AATAAAAGAAGAAGCAGACA+AGG + chr1_4:7993863-7993882 None:intergenic 30.0%
! CTGCTTCTTCTTTTATTGTT+CGG - chr1_4:7993866-7993885 Msa0147880:five_prime_UTR 30.0%
! AGTTATCTAGCTTCTTCACT+TGG - chr1_4:7990849-7990868 Msa0147880:three_prime_UTR 35.0%
ATCTTCAGCAACAATAGTAG+TGG + chr1_4:7990966-7990985 None:intergenic 35.0%
AAGTGGATAAATGTCACCAT+AGG + chr1_4:7991017-7991036 None:intergenic 35.0%
TATGGTGACATTTATCCACT+TGG - chr1_4:7991016-7991035 Msa0147880:exon 35.0%
!! TATTTTTGTGACACACATGC+AGG - chr1_4:7991151-7991170 Msa0147880:CDS 35.0%
! ATTTTTGTGACACACATGCA+GGG - chr1_4:7991152-7991171 Msa0147880:CDS 35.0%
ATGCAGGGAATACTTATCAA+TGG - chr1_4:7991167-7991186 Msa0147880:CDS 35.0%
TTTGTCACAGAATGAATGTC+TGG + chr1_4:7991206-7991225 None:intergenic 35.0%
TATCAATGTCTTCAACAGCT+TGG - chr1_4:7991238-7991257 Msa0147880:CDS 35.0%
! ACGAACCTTTTCTCATTTCA+TGG - chr1_4:7991261-7991280 Msa0147880:CDS 35.0%
TTTACACATAGATAGAGGCT+AGG + chr1_4:7991323-7991342 None:intergenic 35.0%
GCATGTTATGTTGTTAGAGT+TGG - chr1_4:7991367-7991386 Msa0147880:intron 35.0%
! CCAGTACTACATCACATTTT+GGG - chr1_4:7991458-7991477 Msa0147880:CDS 35.0%
TATCTCTTGTAGTACTATGC+TGG - chr1_4:7991579-7991598 Msa0147880:CDS 35.0%
! TCAATTTGATGGTTAGCTAG+AGG + chr1_4:7991849-7991868 None:intergenic 35.0%
ACATGACATGGCATAAAAAC+AGG - chr1_4:7992003-7992022 Msa0147880:CDS 35.0%
ACATGGCATAAAAACAGGAA+TGG - chr1_4:7992008-7992027 Msa0147880:CDS 35.0%
TATGTAAAGTTCTTTCCAGG+TGG + chr1_4:7992092-7992111 None:intergenic 35.0%
GAGGAATTAGAATCCTAAGT+AGG - chr1_4:7992192-7992211 Msa0147880:intron 35.0%
! GTAAATGATTAGTTACCGTG+TGG + chr1_4:7992292-7992311 None:intergenic 35.0%
CTTGTTTCCGTTATCAAGTT+GGG + chr1_4:7992402-7992421 None:intergenic 35.0%
ACTTGTTTCCGTTATCAAGT+TGG + chr1_4:7992403-7992422 None:intergenic 35.0%
ATAAGAATTCCATCAGGGAA+AGG + chr1_4:7992428-7992447 None:intergenic 35.0%
! CGTTGATAAGAATTCCATCA+GGG + chr1_4:7992433-7992452 None:intergenic 35.0%
CCTGATGGAATTCTTATCAA+CGG - chr1_4:7992431-7992450 Msa0147880:intron 35.0%
TCCTGTAACATCAATGACAA+GGG + chr1_4:7992589-7992608 None:intergenic 35.0%
TTCCTGTAACATCAATGACA+AGG + chr1_4:7992590-7992609 None:intergenic 35.0%
ATGTTACAGGAAAGACTTAC+AGG - chr1_4:7992598-7992617 Msa0147880:CDS 35.0%
CAGGCTTAGAATATCAAATG+TGG - chr1_4:7992617-7992636 Msa0147880:CDS 35.0%
TACAGGATTTGTAAATCGAG+AGG + chr1_4:7992817-7992836 None:intergenic 35.0%
ATGGCATGATAAACTTAACG+AGG - chr1_4:7993006-7993025 Msa0147880:intron 35.0%
ATTGTACTATCAAGTTCAGC+TGG - chr1_4:7993032-7993051 Msa0147880:intron 35.0%
!! GCTACTCTTTCTTTGTTGTT+GGG - chr1_4:7993297-7993316 Msa0147880:intron 35.0%
TATGAATGTTGCATGCAGTA+TGG - chr1_4:7993411-7993430 Msa0147880:intron 35.0%
GACAATGGACAAGTGATAAA+AGG - chr1_4:7993440-7993459 Msa0147880:intron 35.0%
TATGTTGCACTTGACAATGT+AGG - chr1_4:7993535-7993554 Msa0147880:CDS 35.0%
! GAACTTGAGGTCAGAATTTT+GGG - chr1_4:7993564-7993583 Msa0147880:intron 35.0%
CCACAAAGTAATGCATTCTT+AGG + chr1_4:7993667-7993686 None:intergenic 35.0%
CCTAAGAATGCATTACTTTG+TGG - chr1_4:7993664-7993683 Msa0147880:intron 35.0%
AGAATGCATTACTTTGTGGT+AGG - chr1_4:7993668-7993687 Msa0147880:intron 35.0%
GAATGCATTACTTTGTGGTA+GGG - chr1_4:7993669-7993688 Msa0147880:intron 35.0%
! GTAGGATTGATTCATGTATG+TGG + chr1_4:7993735-7993754 None:intergenic 35.0%
! AACACTCTTTTGTCCATTCC+TGG - chr1_4:7990737-7990756 Msa0147880:three_prime_UTR 40.0%
AGCAACAATAGTAGTGGTGA+TGG + chr1_4:7990960-7990979 None:intergenic 40.0%
TTGTTGCTGAAGATCCATAC+AGG - chr1_4:7990972-7990991 Msa0147880:three_prime_UTR 40.0%
ATCCATACAGGTTCTTCAAC+TGG - chr1_4:7990984-7991003 Msa0147880:three_prime_UTR 40.0%
TTCCAGTTGAAGAACCTGTA+TGG + chr1_4:7990989-7991008 None:intergenic 40.0%
TTCAACTGGAACGTTACCTA+TGG - chr1_4:7990998-7991017 Msa0147880:three_prime_UTR 40.0%
! TGGCTAGCTAACTAACTAAC+AGG + chr1_4:7991410-7991429 None:intergenic 40.0%
! GCCAGTACTACATCACATTT+TGG - chr1_4:7991457-7991476 Msa0147880:CDS 40.0%
CCCAAAATGTGATGTAGTAC+TGG + chr1_4:7991461-7991480 None:intergenic 40.0%
ACCACTTGTATTGTGTTGTG+TGG - chr1_4:7991501-7991520 Msa0147880:CDS 40.0%
TTGTAGTACTATGCTGGTCA+TGG - chr1_4:7991585-7991604 Msa0147880:CDS 40.0%
AGAAGGAACTCATACGAAGA+TGG - chr1_4:7992041-7992060 Msa0147880:CDS 40.0%
! TCATACGAAGATGGAGTGTT+TGG - chr1_4:7992050-7992069 Msa0147880:CDS 40.0%
AAGTTCTTTCCAGGTGGAAT+GGG + chr1_4:7992086-7992105 None:intergenic 40.0%
AAAGTTCTTTCCAGGTGGAA+TGG + chr1_4:7992087-7992106 None:intergenic 40.0%
CTTTGTGGAATCCAAGAGAT+GGG + chr1_4:7992157-7992176 None:intergenic 40.0%
GGTGATTACACTGTCCTTAT+TGG - chr1_4:7992248-7992267 Msa0147880:intron 40.0%
ACTTGTACCAGTCACCAATA+AGG + chr1_4:7992265-7992284 None:intergenic 40.0%
! ATGATTAGTTACCGTGTGGT+TGG + chr1_4:7992288-7992307 None:intergenic 40.0%
TTGAAGGCCCAACTTGATAA+CGG - chr1_4:7992392-7992411 Msa0147880:intron 40.0%
AACAAGTTACCTTTCCCTGA+TGG - chr1_4:7992416-7992435 Msa0147880:intron 40.0%
! CCGTTGATAAGAATTCCATC+AGG + chr1_4:7992434-7992453 None:intergenic 40.0%
GAATTCTTATCAACGGTCGT+GGG - chr1_4:7992438-7992457 Msa0147880:intron 40.0%
ACAGAATCACAAGATGAAGC+TGG - chr1_4:7992668-7992687 Msa0147880:CDS 40.0%
! ATACTCAGTTCTAGTAACCG+CGG - chr1_4:7992758-7992777 Msa0147880:intron 40.0%
GACCAATCAATTTGGATGGT+GGG + chr1_4:7992909-7992928 None:intergenic 40.0%
CAAGGACCAATCAATTTGGA+TGG + chr1_4:7992913-7992932 None:intergenic 40.0%
GGTTCAAGGACCAATCAATT+TGG + chr1_4:7992917-7992936 None:intergenic 40.0%
CATAATGGTATGATCCTTGC+GGG + chr1_4:7992989-7993008 None:intergenic 40.0%
CCATAATGGTATGATCCTTG+CGG + chr1_4:7992990-7993009 None:intergenic 40.0%
AGTTCAGCTGGACAAGTTAA+TGG - chr1_4:7993044-7993063 Msa0147880:intron 40.0%
GTTCAGCTGGACAAGTTAAT+GGG - chr1_4:7993045-7993064 Msa0147880:intron 40.0%
AGATAAATACCACCACCACT+AGG + chr1_4:7993185-7993204 None:intergenic 40.0%
! GAAGGATGTCTTCGTCATTT+TGG + chr1_4:7993259-7993278 None:intergenic 40.0%
!! CATCAAGATGATAGCTCTGA+AGG + chr1_4:7993277-7993296 None:intergenic 40.0%
CTTCAGAGCTATCATCTTGA+TGG - chr1_4:7993275-7993294 Msa0147880:intron 40.0%
! GGCTACTCTTTCTTTGTTGT+TGG - chr1_4:7993296-7993315 Msa0147880:intron 40.0%
AATGTTGCATGCAGTATGGA+TGG - chr1_4:7993415-7993434 Msa0147880:intron 40.0%
TGACTTTGGATATACCTGAG+TGG + chr1_4:7993503-7993522 None:intergenic 40.0%
CTCAGGTATATCCAAAGTCA+TGG - chr1_4:7993503-7993522 Msa0147880:CDS 40.0%
TAGATAGCAGTCCATGACTT+TGG + chr1_4:7993517-7993536 None:intergenic 40.0%
CACTTGACAATGTAGGAATG+TGG - chr1_4:7993542-7993561 Msa0147880:CDS 40.0%
ATGTAGGAATGTGGAACTTG+AGG - chr1_4:7993551-7993570 Msa0147880:CDS 40.0%
! GGAACTTGAGGTCAGAATTT+TGG - chr1_4:7993563-7993582 Msa0147880:intron 40.0%
! TTTTGGGCACGACAATATCT+CGG - chr1_4:7993580-7993599 Msa0147880:intron 40.0%
TGGTAGCTAAGTCATCAAAG+GGG + chr1_4:7993715-7993734 None:intergenic 40.0%
GTGGTAGCTAAGTCATCAAA+GGG + chr1_4:7993716-7993735 None:intergenic 40.0%
TGTGGTAGCTAAGTCATCAA+AGG + chr1_4:7993717-7993736 None:intergenic 40.0%
!! ATTGATGCTGTGTTGGTTGA+TGG - chr1_4:7993904-7993923 Msa0147880:five_prime_UTR 40.0%
AGAATATGTGACCTCGAGTA+GGG + chr1_4:7993957-7993976 None:intergenic 40.0%
AAGAATATGTGACCTCGAGT+AGG + chr1_4:7993958-7993977 None:intergenic 40.0%
CATTTGAGGAGGCAGTGAAA+TGG - chr1_4:7990892-7990911 Msa0147880:three_prime_UTR 45.0%
! CAGTGAAATGGCACTGAACT+TGG - chr1_4:7990904-7990923 Msa0147880:three_prime_UTR 45.0%
!! TAGTAGTGGTGATGGCAAAG+AGG + chr1_4:7990952-7990971 None:intergenic 45.0%
CTTATCAATGGCCAATTCCC+AGG - chr1_4:7991179-7991198 Msa0147880:CDS 45.0%
CAGAATGAATGTCTGGTCCT+GGG + chr1_4:7991199-7991218 None:intergenic 45.0%
ACAGAATGAATGTCTGGTCC+TGG + chr1_4:7991200-7991219 None:intergenic 45.0%
CACATAGATAGAGGCTAGGA+TGG + chr1_4:7991319-7991338 None:intergenic 45.0%
GCCACACAACACAATACAAG+TGG + chr1_4:7991505-7991524 None:intergenic 45.0%
ATTGTGTTGTGTGGCTGCAA+AGG - chr1_4:7991510-7991529 Msa0147880:CDS 45.0%
TAGTACTATGCTGGTCATGG+TGG - chr1_4:7991588-7991607 Msa0147880:CDS 45.0%
AGTACTATGCTGGTCATGGT+GGG - chr1_4:7991589-7991608 Msa0147880:CDS 45.0%
CAAGTGAAGCTAGCAGATCT+GGG + chr1_4:7991628-7991647 None:intergenic 45.0%
ACAAGTGAAGCTAGCAGATC+TGG + chr1_4:7991629-7991648 None:intergenic 45.0%
AATTGGCCAGCACTGCAATT+TGG - chr1_4:7991731-7991750 Msa0147880:CDS 45.0%
AGAAAGCCAAATTGCAGTGC+TGG + chr1_4:7991740-7991759 None:intergenic 45.0%
!!! AAAAGACTTTTGAGGCAGGC+AGG + chr1_4:7991782-7991801 None:intergenic 45.0%
CGTATGAGTTCCTTCTTTGC+TGG + chr1_4:7992037-7992056 None:intergenic 45.0%
GCTTTGTGGAATCCAAGAGA+TGG + chr1_4:7992158-7992177 None:intergenic 45.0%
CTGGAATTCTTGGCCTACTT+AGG + chr1_4:7992208-7992227 None:intergenic 45.0%
TCGAAGGGAACTGGAATTCT+TGG + chr1_4:7992218-7992237 None:intergenic 45.0%
AAGGACAGTGTAATCACCAG+CGG + chr1_4:7992246-7992265 None:intergenic 45.0%
! ACACTGTCCTTATTGGTGAC+TGG - chr1_4:7992255-7992274 Msa0147880:intron 45.0%
GGAATTCTTATCAACGGTCG+TGG - chr1_4:7992437-7992456 Msa0147880:intron 45.0%
TGGAGGATCATCTCTCAATG+TGG - chr1_4:7992463-7992482 Msa0147880:CDS 45.0%
TCATCTCTCAATGTGGAGCA+AGG - chr1_4:7992470-7992489 Msa0147880:CDS 45.0%
GCCCTTGTCATTGATGTTAC+AGG - chr1_4:7992585-7992604 Msa0147880:CDS 45.0%
CAAGATGAAGCTGGTAGAAG+TGG - chr1_4:7992677-7992696 Msa0147880:CDS 45.0%
ATGAAGCTGGTAGAAGTGGA+AGG - chr1_4:7992681-7992700 Msa0147880:CDS 45.0%
GTTGCTGTAGCGAAGAATTC+CGG + chr1_4:7992850-7992869 None:intergenic 45.0%
GACCCACCATCCAAATTGAT+TGG - chr1_4:7992904-7992923 Msa0147880:intron 45.0%
GGACCAATCAATTTGGATGG+TGG + chr1_4:7992910-7992929 None:intergenic 45.0%
TCAGGTTTGTCCTAATGGAG+CGG + chr1_4:7992944-7992963 None:intergenic 45.0%
TGCTGTCAGGTTTGTCCTAA+TGG + chr1_4:7992949-7992968 None:intergenic 45.0%
CCGCAAGGATCATACCATTA+TGG - chr1_4:7992987-7993006 Msa0147880:intron 45.0%
! AGCCAGCTTAAGAGGAGTAT+CGG + chr1_4:7993111-7993130 None:intergenic 45.0%
AAGAAGTCAGCCAGCTTAAG+AGG + chr1_4:7993119-7993138 None:intergenic 45.0%
! GCTGACTTCTTCAAGATAGC+AGG - chr1_4:7993128-7993147 Msa0147880:intron 45.0%
TATCAGAGATGCTTCCAGGA+CGG + chr1_4:7993160-7993179 None:intergenic 45.0%
AGCATCTCTGATAGACCTAG+TGG - chr1_4:7993167-7993186 Msa0147880:intron 45.0%
ATCTCTGATAGACCTAGTGG+TGG - chr1_4:7993170-7993189 Msa0147880:intron 45.0%
!! CTGCGTCTCTAAGATTGTAC+TGG + chr1_4:7993468-7993487 None:intergenic 45.0%
CTTTGGATATACCTGAGTGG+TGG + chr1_4:7993500-7993519 None:intergenic 45.0%
TTTGGGCACGACAATATCTC+GGG - chr1_4:7993581-7993600 Msa0147880:intron 45.0%
TTACTTTGTGGTAGGGCAAC+TGG - chr1_4:7993676-7993695 Msa0147880:intron 45.0%
CTATAAATGACCCCTACTCG+AGG - chr1_4:7993943-7993962 Msa0147880:five_prime_UTR 45.0%
GAATATGTGACCTCGAGTAG+GGG + chr1_4:7993956-7993975 None:intergenic 45.0%
!!! TTTTTTAACAATAAATAAAT+GGG + chr1_4:7990820-7990839 None:intergenic 5.0%
!! AAAAAAAAAAAAAAATAAGT+AGG + chr1_4:7993753-7993772 None:intergenic 5.0%
AAATGGGAAGGGAAGGGAAG+AGG + chr1_4:7990804-7990823 None:intergenic 50.0%
GAATGTCTGGTCCTGGGAAT+TGG + chr1_4:7991193-7991212 None:intergenic 50.0%
GTTGTGTGGCTGCAAAGGAT+AGG - chr1_4:7991515-7991534 Msa0147880:CDS 50.0%
GGAATGGAGTCCAGCAAAGA+AGG - chr1_4:7992024-7992043 Msa0147880:CDS 50.0%
ACAACATGTCCCATTCCACC+TGG - chr1_4:7992074-7992093 Msa0147880:CDS 50.0%
CTTGGATTCCACAAAGCTGC+TGG - chr1_4:7992161-7992180 Msa0147880:intron 50.0%
CAAAACCACCAGCAGCTTTG+TGG + chr1_4:7992172-7992191 None:intergenic 50.0%
! CACAAAGCTGCTGGTGGTTT+TGG - chr1_4:7992170-7992189 Msa0147880:intron 50.0%
!!! AAAGCTGCTGGTGGTTTTGG+AGG - chr1_4:7992173-7992192 Msa0147880:intron 50.0%
AGGACAGTGTAATCACCAGC+GGG + chr1_4:7992245-7992264 None:intergenic 50.0%
CTGGTACAAGTCCAACCACA+CGG - chr1_4:7992274-7992293 Msa0147880:CDS 50.0%
TTGACCCACGTGAACGTCAA+GGG + chr1_4:7992736-7992755 None:intergenic 50.0%
ATTGACCCACGTGAACGTCA+AGG + chr1_4:7992737-7992756 None:intergenic 50.0%
AATCCTGTACTCACCTCCAC+CGG - chr1_4:7992828-7992847 Msa0147880:intron 50.0%
AACTCTGCAGGTCCAGTTTC+AGG - chr1_4:7992867-7992886 Msa0147880:intron 50.0%
CAGGTTTGTCCTAATGGAGC+GGG + chr1_4:7992943-7992962 None:intergenic 50.0%
AGGACAAACCTGACAGCAAG+TGG - chr1_4:7992951-7992970 Msa0147880:intron 50.0%
TGGTATGATCCTTGCGGGTT+TGG + chr1_4:7992984-7993003 None:intergenic 50.0%
!! CAGCTTAAGAGGAGTATCGG+GGG + chr1_4:7993108-7993127 None:intergenic 50.0%
!! CCAGCTTAAGAGGAGTATCG+GGG + chr1_4:7993109-7993128 None:intergenic 50.0%
!! GCCAGCTTAAGAGGAGTATC+GGG + chr1_4:7993110-7993129 None:intergenic 50.0%
ATAGCAGGTGTTTACCGTCC+TGG - chr1_4:7993143-7993162 Msa0147880:intron 50.0%
GGTCTATCAGAGATGCTTCC+AGG + chr1_4:7993164-7993183 None:intergenic 50.0%
TCTGATAGACCTAGTGGTGG+TGG - chr1_4:7993173-7993192 Msa0147880:intron 50.0%
GTTGCATGCAGTATGGATGG+AGG - chr1_4:7993418-7993437 Msa0147880:intron 50.0%
GCAGTATGGATGGAGGACAA+TGG - chr1_4:7993425-7993444 Msa0147880:intron 50.0%
ATTCCTGGCCATGTGCTGTG+CGG - chr1_4:7990752-7990771 Msa0147880:three_prime_UTR 55.0%
!! TCCACTTGGTGTTCGCCAAC+AGG - chr1_4:7991030-7991049 Msa0147880:CDS 55.0%
ACCTGTTGGCGAACACCAAG+TGG + chr1_4:7991034-7991053 None:intergenic 55.0%
GCTAGCAGATCTGGGTGGAA+TGG + chr1_4:7991620-7991639 None:intergenic 55.0%
GTGAAGCTAGCAGATCTGGG+TGG + chr1_4:7991625-7991644 None:intergenic 55.0%
GGATTCCACAAAGCTGCTGG+TGG - chr1_4:7992164-7992183 Msa0147880:intron 55.0%
TCACCAGCGGGATCATCGAA+GGG + chr1_4:7992233-7992252 None:intergenic 55.0%
ATCACCAGCGGGATCATCGA+AGG + chr1_4:7992234-7992253 None:intergenic 55.0%
CTTATCAACGGTCGTGGGTC+TGG - chr1_4:7992443-7992462 Msa0147880:intron 55.0%
! GGAGGAGTAGGTGGTTTGGA+GGG + chr1_4:7992715-7992734 None:intergenic 55.0%
CAAGGGAGGAGTAGGTGGTT+TGG + chr1_4:7992719-7992738 None:intergenic 55.0%
AACGTCAAGGGAGGAGTAGG+TGG + chr1_4:7992724-7992743 None:intergenic 55.0%
GTGAACGTCAAGGGAGGAGT+AGG + chr1_4:7992727-7992746 None:intergenic 55.0%
TCCTCCCTTGACGTTCACGT+GGG - chr1_4:7992729-7992748 Msa0147880:intron 55.0%
CTAGTAACCGCGGATCAACC+TGG - chr1_4:7992768-7992787 Msa0147880:intron 55.0%
!! GTCTTGACCAGGTTGATCCG+CGG + chr1_4:7992778-7992797 None:intergenic 55.0%
ATTCCGGTGGAGGTGAGTAC+AGG + chr1_4:7992834-7992853 None:intergenic 55.0%
GTAGCGAAGAATTCCGGTGG+AGG + chr1_4:7992844-7992863 None:intergenic 55.0%
GCTGTAGCGAAGAATTCCGG+TGG + chr1_4:7992847-7992866 None:intergenic 55.0%
CTTCGCTACAGCAACTCTGC+AGG - chr1_4:7992855-7992874 Msa0147880:intron 55.0%
!! TTTGGATGGTGGGTCCACCA+GGG + chr1_4:7992899-7992918 None:intergenic 55.0%
!! ATTTGGATGGTGGGTCCACC+AGG + chr1_4:7992900-7992919 None:intergenic 55.0%
! AATGGAGCGGGCTTGGTTCA+AGG + chr1_4:7992931-7992950 None:intergenic 55.0%
TGAACCAAGCCCGCTCCATT+AGG - chr1_4:7992931-7992950 Msa0147880:intron 55.0%
! TTGTCCTAATGGAGCGGGCT+TGG + chr1_4:7992938-7992957 None:intergenic 55.0%
!! GTCTTGGTCCACTTGCTGTC+AGG + chr1_4:7992962-7992981 None:intergenic 55.0%
! GATCCTTGCGGGTTTGGTCT+TGG + chr1_4:7992978-7992997 None:intergenic 55.0%
CCCCGATACTCCTCTTAAGC+TGG - chr1_4:7993106-7993125 Msa0147880:intron 55.0%
AGTTTCGCGTTCCACCACTC+AGG - chr1_4:7993486-7993505 Msa0147880:CDS 55.0%
GCACAGCACATGGCCAGGAA+TGG + chr1_4:7990753-7990772 None:intergenic 60.0%
! AATGGGCACCGCACAGCACA+TGG + chr1_4:7990763-7990782 None:intergenic 60.0%
GGGAAGGGAAGGGAAGAGGA+AGG + chr1_4:7990800-7990819 None:intergenic 60.0%
!!! GACTTTTGAGGCAGGCAGGC+AGG + chr1_4:7991778-7991797 None:intergenic 60.0%
GCGGGATCATCGAAGGGAAC+TGG + chr1_4:7992227-7992246 None:intergenic 60.0%
GTTCCCTTCGATGATCCCGC+TGG - chr1_4:7992227-7992246 Msa0147880:intron 60.0%
ATCAACGGTCGTGGGTCTGG+AGG - chr1_4:7992446-7992465 Msa0147880:intron 60.0%
! GGGAGGAGTAGGTGGTTTGG+AGG + chr1_4:7992716-7992735 None:intergenic 60.0%
CTCCTCCCTTGACGTTCACG+TGG - chr1_4:7992728-7992747 Msa0147880:intron 60.0%
ACCCACGTGAACGTCAAGGG+AGG + chr1_4:7992733-7992752 None:intergenic 60.0%
!! TTGGATGGTGGGTCCACCAG+GGG + chr1_4:7992898-7992917 None:intergenic 60.0%
GGACCAAGACCAAACCCGCA+AGG - chr1_4:7992972-7992991 Msa0147880:intron 60.0%
CCAGGGGGTGGACCTGAAAC+TGG + chr1_4:7992882-7992901 None:intergenic 65.0%
! CCAGTTTCAGGTCCACCCCC+TGG - chr1_4:7992879-7992898 Msa0147880:intron 65.0%
! GTTTCAGGTCCACCCCCTGG+TGG - chr1_4:7992882-7992901 Msa0147880:intron 65.0%
!! TGGATGGTGGGTCCACCAGG+GGG + chr1_4:7992897-7992916 None:intergenic 65.0%
GCACCGCACAGCACATGGCC+AGG + chr1_4:7990758-7990777 None:intergenic 70.0%
!! ATGGTGGGTCCACCAGGGGG+TGG + chr1_4:7992894-7992913 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 7990715 7994033 7990715 ID=Msa0147880;Name=Msa0147880
chr1_4 mRNA 7990715 7994033 7990715 ID=Msa0147880-mRNA-1;Parent=Msa0147880;Name=Msa0147880-mRNA-1;_AED=0.08;_eAED=0.08;_QI=196|1|1|1|1|1|6|313|542
chr1_4 exon 7990715 7991319 7990715 ID=Msa0147880-mRNA-1:exon:3444;Parent=Msa0147880-mRNA-1
chr1_4 exon 7991430 7992141 7991430 ID=Msa0147880-mRNA-1:exon:3443;Parent=Msa0147880-mRNA-1
chr1_4 exon 7992257 7992359 7992257 ID=Msa0147880-mRNA-1:exon:3442;Parent=Msa0147880-mRNA-1
chr1_4 exon 7992453 7992723 7992453 ID=Msa0147880-mRNA-1:exon:3441;Parent=Msa0147880-mRNA-1
chr1_4 exon 7993466 7993575 7993466 ID=Msa0147880-mRNA-1:exon:3440;Parent=Msa0147880-mRNA-1
chr1_4 exon 7993697 7994033 7993697 ID=Msa0147880-mRNA-1:exon:3439;Parent=Msa0147880-mRNA-1
chr1_4 five_prime_UTR 7993838 7994033 7993838 ID=Msa0147880-mRNA-1:five_prime_utr;Parent=Msa0147880-mRNA-1
chr1_4 CDS 7993697 7993837 7993697 ID=Msa0147880-mRNA-1:cds;Parent=Msa0147880-mRNA-1
chr1_4 CDS 7993466 7993575 7993466 ID=Msa0147880-mRNA-1:cds;Parent=Msa0147880-mRNA-1
chr1_4 CDS 7992453 7992723 7992453 ID=Msa0147880-mRNA-1:cds;Parent=Msa0147880-mRNA-1
chr1_4 CDS 7992257 7992359 7992257 ID=Msa0147880-mRNA-1:cds;Parent=Msa0147880-mRNA-1
chr1_4 CDS 7991430 7992141 7991430 ID=Msa0147880-mRNA-1:cds;Parent=Msa0147880-mRNA-1
chr1_4 CDS 7991028 7991319 7991028 ID=Msa0147880-mRNA-1:cds;Parent=Msa0147880-mRNA-1
chr1_4 three_prime_UTR 7990715 7991027 7990715 ID=Msa0147880-mRNA-1:three_prime_utr;Parent=Msa0147880-mRNA-1
Gene Sequence

>Msa0147880

ATGGCACTGAACTTGGTGTTATTATGTGTTAGTGTTTACCTCTTTGCCATCACCACTACTATTGTTGCTGAAGATCCATACAGGTTCTTCAACTGGAACGTTACCTATGGTGACATTTATCCACTTGGTGTTCGCCAACAGGGAATACTTATCAATGGCCAATTCCCAGGACCAGACATTCATTCTGTGACAAATGATAATCTCATTATCAATGTCTTCAACAGCTTGGACGAACCTTTTCTCATTTCATGGAATGGAGTCCAGCAAAGAAGGAACTCATACGAAGATGGAGTGTTTGGAACAACATGTCCCATTCCACCTGGAAAGAACTTTACATACATACTTCAAGTGAAAGATCAAATTGGTAGTTTCTATTATTTCCCATCTCTTGGATTCCACAAAGCTGCTGGTGGTTTTGGAGGAATTAGAATCCTAAGTAGGCCAAGAATTCCAGTTCCCTTCGATGATCCCGCTGGTGATTACACTGTCCTTATTGGTGACTGGTACAAGTCCAACCACACGGATTTGAAGGCCCAACTTGATAACGGAAACAAGTTACCTTTCCCTGATGGAATTCTTATCAACGGTCGTGGGTCTGGAGGATCATCTCTCAATGTGGAGCAAGGAAAGACTTACAGGCTTAGAATATCAAATGTGGGATTGGAAAATTCACTCAACTTTCGCATACAGAATCACAAGATGAAGCTGGTAGAAGTGGAAGGAACACACACCCTCCAAACCACCTACTCCTCCCTTGACGTTCACGTGGGTCAATCATACTCAGTTCTAGTAACCGCGGATCAACCTGGTCAAGACTATTATATTGTTGTTTCCTCTCGATTTACAAATCCTGTACTCACCTCCACCGGAATTCTTCGCTACAGCAACTCTGCAGGTCCAGTTTCAGGTCCACCCCCTGGTGGACCCACCATCCAAATTGATTGGTCCTTGAACCAAGCCCGCTCCATTAGGACAAACCTGACAGCAAGTGGACCAAGACCAAACCCGCAAGGATCATACCATTATGGCATGATAAACTTAACGAGGACAATTGTACTATCAAGTTCAGCTGGACAAGTTAATGGGAAACAAAGATACGCAATTAACAGTGTGTCTTATGTTGCCCCCGATACTCCTCTTAAGCTGGCTGACTTCTTCAAGATAGCAGGTGTTTACCGTCCTGGAAGCATCTCTGATAGACCTAGTGGTGGTGGTATTTATCTCGACACTTCTGTTATGCAAACTGACTACAGAACATTTGTTGAGATTGTTTTCCAAAATGACGAAGACATCCTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTTGTTGGTATGGATGGAGGACAATGGACAAGTGATAAAAGGAACCAGTACAATCTTAGAGACGCAGTTTCGCGTTCCACCACTCAGGTATATCCAAAGTCATGGACTGCTATCTATGTTGCACTTGACAATGTAGGAATGTGGAACTTGAGGTCAGAATTTTGGGCACGACAATATCTCGGGCAACAGTTTTATATGCGTGTATACACAACATCAACATCACTCAGAGATGAATACCCTATTCCTAAGAATGCATTACTTTGTGGTAGGGCAACTGGAAGACATACTCGACCCCTTTGA
Protein sequence

>Msa0147880

MALNLVLLCVSVYLFAITTTIVAEDPYRFFNWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLISWNGVQQRRNSYEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLGFHKAAGGFGGIRILSRPRIPVPFDDPAGDYTVLIGDWYKSNHTDLKAQLDNGNKLPFPDGILINGRGSGGSSLNVEQGKTYRLRISNVGLENSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPGQDYYIVVSSRFTNPVLTSTGILRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINLTRTIVLSSSAGQVNGKQRYAINSVSYVAPDTPLKLADFFKIAGVYRPGSISDRPSGGGIYLDTSVMQTDYRTFVEIVFQNDEDILQSYHLDGYSFFVVGMDGGQWTSDKRNQYNLRDAVSRSTTQVYPKSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYPIPKNALLCGRATGRHTRPL*