AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0136890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0136890 MtrunA17_Chr1g0208751 99.821 559 1 0 1 559 1 559 0.0 1132
Msa0136890 MtrunA17_Chr1g0208761 91.771 559 43 3 1 556 1 559 0.0 1000
Msa0136890 MtrunA17_Chr7g0229391 69.053 475 140 3 82 550 17 490 0.0 631
Msa0136890 MtrunA17_CPg0493401 69.118 476 138 4 82 550 17 490 0.0 629
Msa0136890 MtrunA17_Chr3g0090971 68.908 476 139 4 82 550 17 490 0.0 626
Msa0136890 MtrunA17_Chr4g0016371 70.419 453 126 3 104 550 1 451 0.0 613
Msa0136890 MtrunA17_Chr2g0310971 60.152 394 142 6 159 549 29 410 9.58e-158 457
Msa0136890 MtrunA17_Chr2g0310861 60.152 394 142 6 159 549 29 410 9.58e-158 457
Msa0136890 MtrunA17_Chr2g0310911 60.152 394 142 6 159 549 29 410 9.58e-158 457
Msa0136890 MtrunA17_Chr2g0311041 60.152 394 142 6 159 549 29 410 9.58e-158 457
Msa0136890 MtrunA17_Chr7g0222041 63.607 305 82 5 82 379 17 299 5.67e-114 340
Msa0136890 MtrunA17_Chr7g0276011 65.724 283 88 4 82 357 17 297 1.00e-110 333
Msa0136890 MtrunA17_Chr6g0470741 64.286 266 86 4 82 340 17 280 2.87e-99 302
Msa0136890 MtrunA17_Chr7g0227481 64.679 218 52 1 299 516 1 193 2.35e-92 281
Msa0136890 MtrunA17_Chr2g0310901 60.870 161 50 4 1 159 2 151 3.99e-51 173
Msa0136890 MtrunA17_Chr2g0310851 60.870 161 50 4 1 159 2 151 3.99e-51 173
Msa0136890 MtrunA17_Chr2g0310961 60.870 161 50 4 1 159 2 151 3.99e-51 173
Msa0136890 MtrunA17_Chr2g0311031 60.870 161 50 4 1 159 2 151 3.99e-51 173
Msa0136890 MtrunA17_Chr7g0222051 69.298 114 35 0 434 547 1 114 4.43e-49 165
Msa0136890 MtrunA17_Chr1g0187711 68.750 80 25 0 373 452 5 84 1.49e-31 117
Msa0136890 MtrunA17_Chr7g0250051 28.788 396 247 12 121 493 59 442 7.05e-28 117
Msa0136890 MtrunA17_Chr1g0211291 28.846 364 228 8 153 493 89 444 8.58e-28 116
Msa0136890 MtrunA17_Chr4g0003551 47.244 127 61 2 90 210 2 128 2.65e-27 106
Msa0136890 MtrunA17_Chr4g0000341 28.012 332 213 9 180 493 203 526 1.71e-25 110
Msa0136890 MtrunA17_Chr7g0227491 47.321 112 54 1 104 210 1 112 1.10e-23 96.3
Msa0136890 MtrunA17_MTg0490471 25.077 323 221 4 124 434 64 377 2.65e-20 94.4
Msa0136890 MtrunA17_Chr6g0472491 86.957 69 8 1 1 69 1 68 4.33e-18 79.7
Msa0136890 MtrunA17_Chr3g0110291 39.716 141 53 7 2 142 3 111 2.64e-16 75.1
Msa0136890 MtrunA17_Chr4g0015651 24.228 421 277 11 98 506 54 444 6.26e-16 80.9
Msa0136890 MtrunA17_Chr4g0016741 24.228 421 277 11 98 506 54 444 6.26e-16 80.9
Msa0136890 MtrunA17_CPg0492941 24.228 421 277 11 98 506 54 444 6.26e-16 80.9
Msa0136890 MtrunA17_Chr7g0225621 79.487 39 8 0 299 337 1 39 1.15e-15 72.0
Msa0136890 MtrunA17_Chr3g0132421 77.778 45 10 0 98 142 10 54 1.83e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0136890 AT5G08680.1 86.424 523 64 3 37 556 41 559 0.0 917
Msa0136890 AT5G08690.1 84.962 532 72 3 30 556 28 556 0.0 902
Msa0136890 AT5G08670.1 85.824 522 69 2 37 556 38 556 0.0 902
Msa0136890 ATCG00480.1 68.894 479 142 3 82 554 17 494 0.0 635
Msa0136890 AT1G20260.1 28.463 397 248 11 121 493 58 442 2.71e-28 118
Msa0136890 AT1G76030.1 28.788 396 247 11 121 493 58 441 6.70e-28 117
Msa0136890 AT4G38510.5 28.283 396 249 11 121 493 66 449 9.54e-28 117
Msa0136890 AT4G38510.1 28.283 396 249 11 121 493 59 442 1.11e-27 117
Msa0136890 AT4G38510.3 28.283 396 249 11 121 493 59 442 1.11e-27 117
Msa0136890 AT4G38510.4 28.283 396 249 11 121 493 59 442 1.11e-27 117
Msa0136890 AT4G38510.2 28.283 396 249 11 121 493 59 442 1.11e-27 117
Msa0136890 AT1G78900.1 27.350 351 224 10 208 541 229 565 1.54e-25 111
Msa0136890 AT1G78900.2 27.350 351 224 10 208 541 229 565 1.54e-25 111
Msa0136890 ATMG01190.1 26.667 300 199 4 147 434 87 377 3.93e-21 97.4
Msa0136890 AT2G07698.1 26.263 297 198 4 150 434 360 647 9.15e-20 94.0
Msa0136890 ATCG00120.1 23.810 483 298 15 98 546 54 500 9.58e-17 83.6

Find 178 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTTTCTCCACTTATTT+TGG 0.083323 1_3:-69124713 Msa0136890:CDS
CGTGCCCGTGTCGGTCTTAC+TGG 0.200311 1_3:-69126360 Msa0136890:CDS
TCAAGATATCATTGCTATTC+TGG 0.206828 1_3:-69124629 Msa0136890:CDS
GATCCTTGTTACTGGTATTA+AGG 0.259182 1_3:-69126938 Msa0136890:intron
GGACGTATCATGAATGTTAT+TGG 0.260657 1_3:-69127163 Msa0136890:CDS
AAAATTACTGATGAATTTAC+TGG 0.279082 1_3:-69128094 Msa0136890:CDS
TGCTACCACCTTTGCTCACT+TGG 0.289656 1_3:-69124926 Msa0136890:CDS
GGTCAAGTTTGTCAGGTTAT+TGG 0.301021 1_3:-69128058 Msa0136890:CDS
CAATCTCGCGCTTCACCTTA+TGG 0.302992 1_3:-69128214 Msa0136890:CDS
TTCTCTGTGTTTGCTGGTGT+TGG 0.303687 1_3:-69126608 Msa0136890:CDS
GGTGGTTTCTCTGTGTTTGC+TGG 0.310509 1_3:-69126614 Msa0136890:CDS
GTTGGAAGTGGCTCAGCATT+TGG 0.326827 1_3:-69127951 Msa0136890:CDS
AGCTGGTGCGGCGGCGGCAG+CGG 0.335740 1_3:+69128159 None:intergenic
CAAGATATCATTGCTATTCT+GGG 0.368654 1_3:-69124628 Msa0136890:CDS
CCGACACGGGCACGAGCACC+AGG 0.372154 1_3:+69126369 None:intergenic
ATCCAATCTTTCCTCCCCTT+TGG 0.376397 1_3:+69126798 None:intergenic
ACTGATGAATTTACTGGAAA+AGG 0.377841 1_3:-69128088 Msa0136890:CDS
AGAGGTAATTGAACCCTTCT+TGG 0.378135 1_3:+69124996 None:intergenic
GCATTTAGGTTCCCGTTGGC+AGG 0.378643 1_3:-69127195 Msa0136890:intron
AAGAAGGAGGTTCCCGGAGG+TGG 0.379753 1_3:-69128118 Msa0136890:CDS
GACGTTGAGGCAGTGATTGA+TGG 0.383363 1_3:+69128250 None:intergenic
ATTGGATTGTTTGGTGGTGC+TGG 0.384032 1_3:-69126782 Msa0136890:CDS
AATGAAGATGCTAGGGTTTG+TGG 0.384710 1_3:+69128384 None:intergenic
CTATCCTGCTGTTGATCCAT+TGG 0.388341 1_3:-69124749 Msa0136890:CDS
GGAGGAAAGATTGGATTGTT+TGG 0.394972 1_3:-69126791 Msa0136890:CDS
TCTAGATCATTCTTCGAGAT+TGG 0.401462 1_3:-69127975 Msa0136890:CDS
GCAGGAGCTTCTCTATGAAT+AGG 0.403583 1_3:+69126988 None:intergenic
CCAACATTGTCTACTGATCT+TGG 0.404691 1_3:-69125045 Msa0136890:CDS
ATCTTTCCTCCCCTTTGGTA+TGG 0.406086 1_3:+69126803 None:intergenic
CCGGCGAAGAAGGAGGTTCC+CGG 0.406125 1_3:-69128124 Msa0136890:CDS
CCCGTTGGCAGGGCTACCCT+TGG 0.406509 1_3:-69127184 Msa0136890:CDS
TTGGAAGTGGCTCAGCATTT+GGG 0.411969 1_3:-69127950 Msa0136890:CDS
TACCAAAGGGGAGGAAAGAT+TGG 0.412235 1_3:-69126800 Msa0136890:CDS
GAACAACAGATCCTTGTTAC+TGG 0.412746 1_3:-69126946 Msa0136890:CDS
AGACGGAGCTGGTGCGGCGG+CGG 0.416189 1_3:+69128153 None:intergenic
CATAAGGTGAAGCGCGAGAT+TGG 0.420817 1_3:+69128215 None:intergenic
TTCAACTCAACATATTTGCC+TGG 0.425059 1_3:+69124499 None:intergenic
TTCGAGATTGGTGTTGGAAG+TGG 0.436166 1_3:-69127963 Msa0136890:CDS
TTCTTCGCCGGAGGCGCAGA+CGG 0.437983 1_3:+69128136 None:intergenic
GCCGGAGGCGCAGACGGAGC+TGG 0.440470 1_3:+69128142 None:intergenic
ACCAGCTCCGTCTGCGCCTC+CGG 0.443943 1_3:-69128143 Msa0136890:CDS
AGGTGGAAATGAAAGAATAA+AGG 0.451327 1_3:-69128454 Msa0136890:five_prime_UTR
TGAAAATAGATTTCTGAGCT+TGG 0.452396 1_3:-69124775 Msa0136890:intron
AGAGAGAGAATGAAGATGCT+AGG 0.453668 1_3:+69128376 None:intergenic
GTCTGCGCCTCCGGCGAAGA+AGG 0.456242 1_3:-69128134 Msa0136890:CDS
GGTCGTATTCCATCTGCTGT+TGG 0.461688 1_3:-69125075 Msa0136890:CDS
AGTCAGCAACGCGGTTTAAG+AGG 0.462534 1_3:+69128188 None:intergenic
AGCGGTCGGTCAAGTTTGTC+AGG 0.462609 1_3:-69128065 Msa0136890:CDS
CCTTTGTGTTATTTAATAAG+TGG 0.463636 1_3:-69123564 Msa0136890:three_prime_UTR
TTGTTTGGTGGTGCTGGTGT+AGG 0.469965 1_3:-69126776 Msa0136890:CDS
ATAAGGTGAAGCGCGAGATT+GGG 0.471370 1_3:+69128216 None:intergenic
TGCTCATCACCCAAAATAAG+TGG 0.473721 1_3:+69124703 None:intergenic
GGAGAACACTCAAAGTTTCC+AGG 0.477010 1_3:-69124476 Msa0136890:intron
TGAAGGACAAAATGAGGGGA+GGG 0.478102 1_3:+69123756 None:intergenic
TACTTTCTTGTTAAGAACGT+TGG 0.478851 1_3:-69123517 Msa0136890:three_prime_UTR
TGAATAGATATTTACACTGA+TGG 0.479353 1_3:+69127847 None:intergenic
TATAGATGAAGGACAAAATG+AGG 0.483259 1_3:+69123750 None:intergenic
CCAAGGGTAGCCCTGCCAAC+GGG 0.484569 1_3:+69127184 None:intergenic
GGAGAACCTATCGATCATAA+AGG 0.484786 1_3:-69127142 Msa0136890:CDS
GAGAGAGAATGAAGATGCTA+GGG 0.484830 1_3:+69128377 None:intergenic
AGGCAAATATGTTGAGTTGA+AGG 0.484986 1_3:-69124497 Msa0136890:CDS
GAAGTCTTCACTGGTGCCCC+AGG 0.485134 1_3:-69124517 Msa0136890:CDS
AAGTGAGCAAAGGTGGTAGC+AGG 0.486320 1_3:+69124928 None:intergenic
TGAAGATGCTGCTGATTCCT+TGG 0.486591 1_3:+69123795 None:intergenic
CCCTTTGGTATGGTGCAAGC+AGG 0.487695 1_3:+69126813 None:intergenic
TCCGATCTTGACTGCTCTTG+AGG 0.488534 1_3:-69127999 Msa0136890:CDS
CAGCAGGCACATAGATAGCT+TGG 0.490509 1_3:+69124971 None:intergenic
CATTAAGCTGGGTGAAAAGC+AGG 0.492871 1_3:-69126531 Msa0136890:intron
GCAAAGGTGGTAGCAGGAGC+AGG 0.495043 1_3:+69124934 None:intergenic
AAGACTTCTGCCACGTGGAA+AGG 0.495827 1_3:+69124532 None:intergenic
TACAACAGTGTTGTCTAGAC+AGG 0.501816 1_3:-69124899 Msa0136890:intron
AAGAGAAAAGAAGAAACAAA+CGG 0.503055 1_3:-69128506 Msa0136890:five_prime_UTR
GGGCAGTTGACCACAGAACT+TGG 0.504661 1_3:+69123595 None:intergenic
TCAGAGGTGTCTGCCCTGCT+TGG 0.505198 1_3:-69125096 Msa0136890:CDS
GTTGTACACCACGAGCAGTT+TGG 0.510260 1_3:+69124677 None:intergenic
GAAGATGGCTTCACGCAGAT+TGG 0.511649 1_3:-69128317 Msa0136890:exon
TCAACTCAACATATTTGCCT+GGG 0.512319 1_3:+69124500 None:intergenic
GGAAAGATTGGATTGTTTGG+TGG 0.512411 1_3:-69126788 Msa0136890:CDS
CGCAGACGGAGCTGGTGCGG+CGG 0.513405 1_3:+69128150 None:intergenic
TGAGAGTGGTGTCATTAAGC+TGG 0.514665 1_3:-69126543 Msa0136890:CDS
TCATTCTTCGAGATTGGTGT+TGG 0.515515 1_3:-69127969 Msa0136890:CDS
CCGGGAACCTCCTTCTTCGC+CGG 0.517979 1_3:+69128124 None:intergenic
GGTAATTGAACCCTTCTTGG+TGG 0.519165 1_3:+69124999 None:intergenic
TATAAAATGCCTGCTCTGAA+AGG 0.522100 1_3:+69123863 None:intergenic
AACAATGTTGCTAAGGCTCA+TGG 0.524856 1_3:-69126725 Msa0136890:intron
TATCATTGCTATTCTGGGAA+TGG 0.525736 1_3:-69124623 Msa0136890:CDS
AGCAAATGTGCTCTTGTGTA+TGG 0.527028 1_3:-69126408 Msa0136890:CDS
CGGTTTAAGAGGTAGCCATA+AGG 0.528728 1_3:+69128199 None:intergenic
ACTTATCAACAATGTTGCTA+AGG 0.530040 1_3:-69126732 Msa0136890:CDS
AGAGAAAAGAAGAAACAAAC+GGG 0.534282 1_3:-69128505 Msa0136890:five_prime_UTR
CTGAAGGTGTTGTTCGTGGA+TGG 0.535684 1_3:-69127892 Msa0136890:CDS
GTGGCTCAGCATTTGGGTGA+AGG 0.538038 1_3:-69127944 Msa0136890:CDS
CATTTAGGTTCCCGTTGGCA+GGG 0.541826 1_3:-69127194 Msa0136890:intron
AATTCGCCTTTATGATCGAT+AGG 0.542417 1_3:+69127136 None:intergenic
GGGTTTGTGGAGTGAGAGAG+TGG 0.542477 1_3:+69128397 None:intergenic
GAATCCAATGGATCAACAGC+AGG 0.543347 1_3:+69124745 None:intergenic
CCTGCTTGCACCATACCAAA+GGG 0.545094 1_3:-69126813 Msa0136890:CDS
ATATGATGACCTTTCAGAGC+AGG 0.545699 1_3:-69123872 Msa0136890:CDS
GCGTATTACAACCACCAAGA+AGG 0.546572 1_3:-69125010 Msa0136890:CDS
GCTACTGAAGGTGTTGTTCG+TGG 0.547853 1_3:-69127896 Msa0136890:CDS
GTTGCTTGCTCAACAAAAGC+AGG 0.548745 1_3:+69126970 None:intergenic
GGATCTGTCAAATCATCAGC+AGG 0.549266 1_3:+69124955 None:intergenic
CACGTGGCAGAAGTCTTCAC+TGG 0.550208 1_3:-69124526 Msa0136890:CDS
AGGCGCAGACGGAGCTGGTG+CGG 0.551051 1_3:+69128147 None:intergenic
ATAGATGAAGGACAAAATGA+GGG 0.552141 1_3:+69123751 None:intergenic
ACCTCAAGAGCAGTCAAGAT+CGG 0.553967 1_3:+69127998 None:intergenic
CCTGGTGCTCGTGCCCGTGT+CGG 0.555324 1_3:-69126369 Msa0136890:CDS
TCCAAGGGTAGCCCTGCCAA+CGG 0.557056 1_3:+69127183 None:intergenic
AGAAGGAGGTTCCCGGAGGT+GGG 0.562284 1_3:-69128117 Msa0136890:CDS
GAATAGATATTTACACTGAT+GGG 0.564594 1_3:+69127848 None:intergenic
GTTGACGTCAGATTTGAAGA+AGG 0.565009 1_3:-69128028 Msa0136890:CDS
CAACAAACACTCAGAATGAA+AGG 0.566255 1_3:+69123634 None:intergenic
GACACGGGCACGAGCACCAG+GGG 0.566580 1_3:+69126371 None:intergenic
ACCTGCTTGCACCATACCAA+AGG 0.568701 1_3:-69126814 Msa0136890:CDS
GTTTCGATGAAGATCGGCGA+AGG 0.571803 1_3:+69128272 None:intergenic
TTGATGGTTTCGATGAAGAT+CGG 0.572741 1_3:+69128266 None:intergenic
AACTTACAGGGTGTGTTGGA+TGG 0.575385 1_3:-69123898 Msa0136890:intron
CACATAGATAGCTTGGACAG+AGG 0.576642 1_3:+69124978 None:intergenic
CGTATTACAACCACCAAGAA+GGG 0.576665 1_3:-69125009 Msa0136890:CDS
GGTTGGTAACCAACAGCAGA+TGG 0.577576 1_3:+69125066 None:intergenic
ATGAATAGGCAAATAATGCT+CGG 0.578382 1_3:+69127002 None:intergenic
GGAACCTCCTTCTTCGCCGG+AGG 0.581216 1_3:+69128127 None:intergenic
AGATGGAATACGACCAAGCA+GGG 0.581769 1_3:+69125083 None:intergenic
ATGAAGGACAAAATGAGGGG+AGG 0.583596 1_3:+69123755 None:intergenic
ATACGAGATGTTGAATCCAA+TGG 0.586954 1_3:+69124733 None:intergenic
TAACATTCATGATACGTCCA+AGG 0.587125 1_3:+69127167 None:intergenic
TCTACTTGCTGAATTTGTGA+TGG 0.589025 1_3:-69123444 Msa0136890:three_prime_UTR
CAGATGGAATACGACCAAGC+AGG 0.590811 1_3:+69125082 None:intergenic
TATTGCATTTAGGTTCCCGT+TGG 0.591161 1_3:-69127199 Msa0136890:intron
GTATAACTTACAGGGTGTGT+TGG 0.591327 1_3:-69123902 Msa0136890:intron
TGCGCCTCCGGCGAAGAAGG+AGG 0.594849 1_3:-69128131 Msa0136890:CDS
AGCATCCAAGTGAGCAAAGG+TGG 0.598239 1_3:+69124921 None:intergenic
TTCAAATCTGACGTCAACGA+CGG 0.598861 1_3:+69128033 None:intergenic
TTCAGTAGCATCCATAGCAA+TGG 0.599982 1_3:+69127910 None:intergenic
TGTACAAGTCATTACCCTCA+CGG 0.600998 1_3:+69126576 None:intergenic
GGAGGTTAGCCTCGACGTTG+AGG 0.604126 1_3:+69128237 None:intergenic
GATCAGTAGACAATGTTGGT+TGG 0.607921 1_3:+69125049 None:intergenic
AGGTGAAGCGCGAGATTGGG+AGG 0.610480 1_3:+69128219 None:intergenic
CGACACGGGCACGAGCACCA+GGG 0.613887 1_3:+69126370 None:intergenic
TTTACTGGAAAAGGAGCGGT+CGG 0.614536 1_3:-69128079 Msa0136890:CDS
TGTTGTGAGAACCATTGCTA+TGG 0.617952 1_3:-69127921 Msa0136890:CDS
TGGTGCTTACTTGAGTAAAG+CGG 0.618849 1_3:+69126268 None:intergenic
AAGTCCAGTAAGACCGACAC+GGG 0.620214 1_3:+69126356 None:intergenic
CCAAGATCAGTAGACAATGT+TGG 0.620434 1_3:+69125045 None:intergenic
GTACAAGTCATTACCCTCAC+GGG 0.622213 1_3:+69126577 None:intergenic
CATCTTGTCCTTCAGCATCA+CGG 0.623861 1_3:+69126316 None:intergenic
GAGAGTGGTGTCATTAAGCT+GGG 0.624808 1_3:-69126542 Msa0136890:CDS
ACATTGTCTACTGATCTTGG+AGG 0.626628 1_3:-69125042 Msa0136890:CDS
CCACTTATTAAATAACACAA+AGG 0.632401 1_3:+69123564 None:intergenic
CAACTCAACATATTTGCCTG+GGG 0.640965 1_3:+69124501 None:intergenic
GAGCATTTCCGTGATGCTGA+AGG 0.641193 1_3:-69126324 Msa0136890:CDS
GGATGGAGAGTTCTCAACAC+TGG 0.642951 1_3:-69127875 Msa0136890:CDS
TGTAGCATCCAAGTGAGCAA+AGG 0.644891 1_3:+69124918 None:intergenic
AACATTCATGATACGTCCAA+GGG 0.646240 1_3:+69127168 None:intergenic
TAATAAGTGGAAGATGCAAG+AGG 0.652630 1_3:-69123551 Msa0136890:three_prime_UTR
TATCGATGAAGTCATTGCAA+AGG 0.656711 1_3:-69123830 Msa0136890:CDS
TTTCGATGAAGATCGGCGAA+GGG 0.656946 1_3:+69128273 None:intergenic
GAGCACTACCAAACTGCTCG+TGG 0.658374 1_3:-69124685 Msa0136890:CDS
GTGAGATGTACCAAGTTCTG+TGG 0.663357 1_3:-69123605 Msa0136890:intron
CAGTGAAGACTTCTGCCACG+TGG 0.672728 1_3:+69124527 None:intergenic
TAGATGAAGGACAAAATGAG+GGG 0.673311 1_3:+69123752 None:intergenic
CAATCACTGCCTCAACGTCG+AGG 0.673700 1_3:-69128246 Msa0136890:CDS
TCAAGAGCAGTCAAGATCGG+AGG 0.674140 1_3:+69128001 None:intergenic
CTTGCACCATACCAAAGGGG+AGG 0.675495 1_3:-69126809 Msa0136890:CDS
CTTAAGTCAGCCTTTCCACG+TGG 0.682611 1_3:-69124542 Msa0136890:CDS
AAAGGCAGAGAAGATTGCCA+AGG 0.685398 1_3:-69123812 Msa0136890:CDS
TGAATTTACTGGAAAAGGAG+CGG 0.685743 1_3:-69128083 Msa0136890:CDS
ATTGCTATGGATGCTACTGA+AGG 0.691576 1_3:-69127908 Msa0136890:CDS
TTACCTTAATACCAGTAACA+AGG 0.693188 1_3:+69126935 None:intergenic
TACAGAGAAATGATTGAGAG+TGG 0.693204 1_3:-69126557 Msa0136890:CDS
TAAGTCCAGTAAGACCGACA+CGG 0.693275 1_3:+69126355 None:intergenic
GTTGGAGAAAGAACCCGTGA+GGG 0.695614 1_3:-69126590 Msa0136890:CDS
TGTTGGAGAAAGAACCCGTG+AGG 0.716517 1_3:-69126591 Msa0136890:CDS
ACACGGGCACGAGCACCAGG+GGG 0.726552 1_3:+69126372 None:intergenic
GTAATTGTAGGCTAACTCAG+AGG 0.733224 1_3:-69125112 Msa0136890:intron
GCGAAGAAGGAGGTTCCCGG+AGG 0.734342 1_3:-69128121 Msa0136890:CDS
CTGCTTGCACCATACCAAAG+GGG 0.735053 1_3:-69126812 Msa0136890:CDS
CGGTTGCATAGTCAGCAACG+CGG 0.742675 1_3:+69128179 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTATGTATATATGTTT+CGG - chr1_3:69126016-69126035 Msa0136890:intron 10.0%
!! AAGTTATAAAAATTTCAAAA+TGG + chr1_3:69128261-69128280 None:intergenic 10.0%
!!! TTTTTATTGTTTTTTGATTG+TGG - chr1_3:69124297-69124316 Msa0136890:intron 15.0%
!! GAAAAGTTATAGAAATTAAA+CGG + chr1_3:69124671-69124690 None:intergenic 15.0%
!! TAGACTAAAAATAAATTTAG+AGG + chr1_3:69124826-69124845 None:intergenic 15.0%
!! ATAAAAAGATTTAAGGAAAT+GGG + chr1_3:69125033-69125052 None:intergenic 15.0%
!!! ATTTCCTTAAATCTTTTTAT+GGG - chr1_3:69125033-69125052 Msa0136890:CDS 15.0%
!! AAAAAAAAATAAGGCAAAAT+TGG + chr1_3:69125080-69125099 None:intergenic 15.0%
!!! TTTTAATTTTAGAACTAGTT+CGG - chr1_3:69126549-69126568 Msa0136890:CDS 15.0%
!! AACATTAAAATAGTTCAATT+TGG - chr1_3:69126599-69126618 Msa0136890:CDS 15.0%
!! ATAAATAGACAATGATAAAA+AGG + chr1_3:69126770-69126789 None:intergenic 15.0%
!!! TCTATATTTTAAATTTCTGT+TGG - chr1_3:69127587-69127606 Msa0136890:intron 15.0%
!! TTGCGAAAATTTAATAATTT+AGG - chr1_3:69128200-69128219 Msa0136890:CDS 15.0%
!!! TGAAATTTTTATAACTTGAA+TGG - chr1_3:69128264-69128283 Msa0136890:CDS 15.0%
!! AAAATTACTGATGAATTTAC+TGG - chr1_3:69123832-69123851 Msa0136890:CDS 20.0%
!!! TGAATTTTTTTTGACTTTAC+TGG - chr1_3:69124127-69124146 Msa0136890:intron 20.0%
!!! ATCTGATTTTGAGATAATTT+TGG - chr1_3:69124169-69124188 Msa0136890:intron 20.0%
!!! TAAGTTTTGATTTTTTGAGA+AGG - chr1_3:69124261-69124280 Msa0136890:intron 20.0%
!! CATAAAAAGATTTAAGGAAA+TGG + chr1_3:69125034-69125053 None:intergenic 20.0%
!!! CATTTCCTTAAATCTTTTTA+TGG - chr1_3:69125032-69125051 Msa0136890:CDS 20.0%
!!! TTGCCTTATTTTTTTTTCAT+AGG - chr1_3:69125083-69125102 Msa0136890:CDS 20.0%
!! CAACCTATGAAAAAAAAATA+AGG + chr1_3:69125089-69125108 None:intergenic 20.0%
!! ATGAACAATATTATTGAATG+TGG + chr1_3:69125446-69125465 None:intergenic 20.0%
!!! TATTTTTCGAGCTTAATTTA+AGG + chr1_3:69125985-69126004 None:intergenic 20.0%
!! ATGGAATAAAAAAAGGATAA+AGG + chr1_3:69126125-69126144 None:intergenic 20.0%
!! GACAAAAATGGAATAAAAAA+AGG + chr1_3:69126132-69126151 None:intergenic 20.0%
!!! AAAGTGGAATTACATTTTTT+AGG + chr1_3:69126374-69126393 None:intergenic 20.0%
!!! AAAAAATGTAATTCCACTTT+TGG - chr1_3:69126374-69126393 Msa0136890:CDS 20.0%
!!! TGAAGGTAAACTATTTTTTT+GGG - chr1_3:69126653-69126672 Msa0136890:intron 20.0%
!!! TAATGTTTGGTTTTTATGTA+TGG - chr1_3:69126717-69126736 Msa0136890:intron 20.0%
!!! TATGTATGGTTTTTTATAGA+TGG - chr1_3:69126731-69126750 Msa0136890:CDS 20.0%
!! AAGAACTAAATGATCTTATT+TGG - chr1_3:69127120-69127139 Msa0136890:intron 20.0%
!!! AGAACTAAATGATCTTATTT+GGG - chr1_3:69127121-69127140 Msa0136890:intron 20.0%
!!! TTAAGAATCGTTGAATTTTA+CGG + chr1_3:69127369-69127388 None:intergenic 20.0%
!! ATTTGAAAAAAAAACTCCTA+AGG + chr1_3:69127799-69127818 None:intergenic 20.0%
!! TTCTGATTATAACTTAACTA+GGG + chr1_3:69127950-69127969 None:intergenic 20.0%
!! ATTCTGATTATAACTTAACT+AGG + chr1_3:69127951-69127970 None:intergenic 20.0%
!!! AAATGGAATATTTTGTTGTT+TGG + chr1_3:69128244-69128263 None:intergenic 20.0%
!! AAATAACACAAAGGAAAAAA+GGG + chr1_3:69128356-69128375 None:intergenic 20.0%
!! TAAATAACACAAAGGAAAAA+AGG + chr1_3:69128357-69128376 None:intergenic 20.0%
! AAGAGAAAAGAAGAAACAAA+CGG - chr1_3:69123420-69123439 Msa0136890:three_prime_UTR 25.0%
! GAATAGATATTTACACTGAT+GGG + chr1_3:69124081-69124100 None:intergenic 25.0%
! TGAATAGATATTTACACTGA+TGG + chr1_3:69124082-69124101 None:intergenic 25.0%
!! AATTTTTATGTTGCGTTTCA+TGG - chr1_3:69124196-69124215 Msa0136890:intron 25.0%
!! AATAAATGGGGTCTTTTTAA+TGG - chr1_3:69124346-69124365 Msa0136890:intron 25.0%
! CGTGATTACAGTAAATTAAA+CGG + chr1_3:69124397-69124416 None:intergenic 25.0%
!!! TACGCTGTACATATTTTAAA+TGG - chr1_3:69124433-69124452 Msa0136890:intron 25.0%
!!! ACGCTGTACATATTTTAAAT+GGG - chr1_3:69124434-69124453 Msa0136890:intron 25.0%
! TTGCAATTAAAAGTAAAAGC+AGG - chr1_3:69124463-69124482 Msa0136890:intron 25.0%
!! AACATACTTAAAACGCTTTT+TGG + chr1_3:69124693-69124712 None:intergenic 25.0%
! TTTGCCCATAAAAAGATTTA+AGG + chr1_3:69125040-69125059 None:intergenic 25.0%
! TATATCCTAACTTAATGCTT+TGG - chr1_3:69125224-69125243 Msa0136890:intron 25.0%
! TGTATCAAAGTCGTTAATTA+TGG - chr1_3:69125476-69125495 Msa0136890:intron 25.0%
!! AGTTTGCATTAGTAAGTTTT+GGG + chr1_3:69125700-69125719 None:intergenic 25.0%
! ATTACCTGAGATTAAGTTAA+GGG + chr1_3:69126094-69126113 None:intergenic 25.0%
!!! TTATTCCATTTTTGTCCTAT+TGG - chr1_3:69126136-69126155 Msa0136890:intron 25.0%
! CTTTCAATCTTCAAATATGT+GGG - chr1_3:69126211-69126230 Msa0136890:intron 25.0%
! ACTGCAATGAAAAAAGATTA+AGG - chr1_3:69126300-69126319 Msa0136890:CDS 25.0%
! GTGAAAAAAAATACCAAAAG+TGG + chr1_3:69126390-69126409 None:intergenic 25.0%
!! TTTTTCACAATAAGTGATGA+TGG - chr1_3:69126486-69126505 Msa0136890:intron 25.0%
! ACTGTGTATAGCTATTATTA+TGG + chr1_3:69126523-69126542 None:intergenic 25.0%
!!! GTGAAGGTAAACTATTTTTT+TGG - chr1_3:69126652-69126671 Msa0136890:intron 25.0%
!!! GTAAACTATTTTTTTGGGTT+TGG - chr1_3:69126658-69126677 Msa0136890:intron 25.0%
!! TAAGAATCGTTGAATTTTAC+GGG + chr1_3:69127368-69127387 None:intergenic 25.0%
! ATAAGAGTAAGGAAGTAAAT+GGG + chr1_3:69127504-69127523 None:intergenic 25.0%
! AATAAGAGTAAGGAAGTAAA+TGG + chr1_3:69127505-69127524 None:intergenic 25.0%
!!! CTGTTTTTACTTTTAAAGCA+TGG - chr1_3:69127611-69127630 Msa0136890:intron 25.0%
! AAAAAAAACTCCTAAGGAAT+AGG + chr1_3:69127793-69127812 None:intergenic 25.0%
! TTGACTTTATTACAAGTGTT+TGG - chr1_3:69127821-69127840 Msa0136890:intron 25.0%
! GTAAGTTATACCATACAAAA+AGG + chr1_3:69128015-69128034 None:intergenic 25.0%
!! TTTTGTATGGTATAACTTAC+AGG - chr1_3:69128015-69128034 Msa0136890:CDS 25.0%
! TTTGTATGGTATAACTTACA+GGG - chr1_3:69128016-69128035 Msa0136890:CDS 25.0%
!! ATTTTCGCAATTATAGATGA+AGG + chr1_3:69128190-69128209 None:intergenic 25.0%
! ATAATTTAGGAACTCTTTCT+TGG - chr1_3:69128213-69128232 Msa0136890:CDS 25.0%
! AATAACACAAAGGAAAAAAG+GGG + chr1_3:69128355-69128374 None:intergenic 25.0%
! CCACTTATTAAATAACACAA+AGG + chr1_3:69128365-69128384 None:intergenic 25.0%
!!! CCTTTGTGTTATTTAATAAG+TGG - chr1_3:69128362-69128381 Msa0136890:intron 25.0%
AGAGAAAAGAAGAAACAAAC+GGG - chr1_3:69123421-69123440 Msa0136890:three_prime_UTR 30.0%
GAAAAATGGAAAAAGAATCG+AGG - chr1_3:69123452-69123471 Msa0136890:three_prime_UTR 30.0%
AGGTGGAAATGAAAGAATAA+AGG - chr1_3:69123472-69123491 Msa0136890:three_prime_UTR 30.0%
ACTGATGAATTTACTGGAAA+AGG - chr1_3:69123838-69123857 Msa0136890:CDS 30.0%
TGATGTCAATCCTCAATAAA+TGG - chr1_3:69124332-69124351 Msa0136890:intron 30.0%
GATGTCAATCCTCAATAAAT+GGG - chr1_3:69124333-69124352 Msa0136890:intron 30.0%
ATGTCAATCCTCAATAAATG+GGG - chr1_3:69124334-69124353 Msa0136890:intron 30.0%
TAAAAAGACCCCATTTATTG+AGG + chr1_3:69124345-69124364 None:intergenic 30.0%
AGTCCAAAAGAAAGTCAAAT+TGG + chr1_3:69124583-69124602 None:intergenic 30.0%
CAAAAGTAAAAACCAATAGC+AGG + chr1_3:69124629-69124648 None:intergenic 30.0%
CATAGTTGTGTATTGCATTT+AGG - chr1_3:69124717-69124736 Msa0136890:CDS 30.0%
TCATCAGTTGAAAATCACTA+TGG + chr1_3:69124879-69124898 None:intergenic 30.0%
ATGAATAGGCAAATAATGCT+CGG + chr1_3:69124927-69124946 None:intergenic 30.0%
TTACCTTAATACCAGTAACA+AGG + chr1_3:69124994-69125013 None:intergenic 30.0%
AGGAAAAACGGTTCTTATTA+TGG - chr1_3:69125170-69125189 Msa0136890:intron 30.0%
ACTTATCAACAATGTTGCTA+AGG - chr1_3:69125194-69125213 Msa0136890:intron 30.0%
! TGGGTGCATGATTTAAATTT+TGG + chr1_3:69125681-69125700 None:intergenic 30.0%
! CAGTTTGCATTAGTAAGTTT+TGG + chr1_3:69125701-69125720 None:intergenic 30.0%
! TGTTCTTTGTGTTTGGTAAT+TGG - chr1_3:69125831-69125850 Msa0136890:intron 30.0%
CATTACCTGAGATTAAGTTA+AGG + chr1_3:69126095-69126114 None:intergenic 30.0%
! CTTAATCTCAGGTAATGTTT+TGG - chr1_3:69126098-69126117 Msa0136890:intron 30.0%
ATGAACCAATAGGACAAAAA+TGG + chr1_3:69126144-69126163 None:intergenic 30.0%
!! ATTTTCAAGCTTGAAATCCA+CGG - chr1_3:69126174-69126193 Msa0136890:intron 30.0%
CCACATATTTGAAGATTGAA+AGG + chr1_3:69126213-69126232 None:intergenic 30.0%
CCTTTCAATCTTCAAATATG+TGG - chr1_3:69126210-69126229 Msa0136890:intron 30.0%
CTTGAAAATCCATATGCAAA+AGG - chr1_3:69126273-69126292 Msa0136890:intron 30.0%
TTAGTCCTTGACTTAATTTC+AGG + chr1_3:69126338-69126357 None:intergenic 30.0%
!! TTTAGGAAAATTTGGTGTCA+CGG + chr1_3:69126438-69126457 None:intergenic 30.0%
!!! TTGCGTGTTTTAGGAAAATT+TGG + chr1_3:69126446-69126465 None:intergenic 30.0%
! GCTAATAAATTGCGTGTTTT+AGG + chr1_3:69126455-69126474 None:intergenic 30.0%
!!! AATTTTAGAACTAGTTCGGT+AGG - chr1_3:69126553-69126572 Msa0136890:CDS 30.0%
!!! ATTTTAGAACTAGTTCGGTA+GGG - chr1_3:69126554-69126573 Msa0136890:CDS 30.0%
!!! TATTTTAATGTTCAGTCCAG+TGG + chr1_3:69126591-69126610 None:intergenic 30.0%
TGAAAATAGATTTCTGAGCT+TGG - chr1_3:69127151-69127170 Msa0136890:CDS 30.0%
! TATGCTTTCTCCACTTATTT+TGG - chr1_3:69127213-69127232 Msa0136890:intron 30.0%
!! ATGCTTTCTCCACTTATTTT+GGG - chr1_3:69127214-69127233 Msa0136890:intron 30.0%
! TCAAGATATCATTGCTATTC+TGG - chr1_3:69127297-69127316 Msa0136890:intron 30.0%
! CAAGATATCATTGCTATTCT+GGG - chr1_3:69127298-69127317 Msa0136890:intron 30.0%
AGTTAAAACAATCAAGTACC+TGG + chr1_3:69127471-69127490 None:intergenic 30.0%
TAAGAGTAAGGAAGTAAATG+GGG + chr1_3:69127503-69127522 None:intergenic 30.0%
ATACTGTGTCAATAAGAGTA+AGG + chr1_3:69127515-69127534 None:intergenic 30.0%
AGAAAAGACAATAAACCACA+AGG + chr1_3:69127570-69127589 None:intergenic 30.0%
ACGATGCAATTCAATAAAGA+AGG + chr1_3:69127688-69127707 None:intergenic 30.0%
! GTACACTTTTCTATCTGATA+TGG - chr1_3:69127718-69127737 Msa0136890:intron 30.0%
! TGGTTAATGACCTTTTTGTA+TGG - chr1_3:69128002-69128021 Msa0136890:CDS 30.0%
ATAGATGAAGGACAAAATGA+GGG + chr1_3:69128178-69128197 None:intergenic 30.0%
TATAGATGAAGGACAAAATG+AGG + chr1_3:69128179-69128198 None:intergenic 30.0%
ATAACACAAAGGAAAAAAGG+GGG + chr1_3:69128354-69128373 None:intergenic 30.0%
TACTTTCTTGTTAAGAACGT+TGG - chr1_3:69128409-69128428 Msa0136890:five_prime_UTR 30.0%
AACGGGTCGAAAATGAAAAA+TGG - chr1_3:69123438-69123457 Msa0136890:three_prime_UTR 35.0%
AAATGGAAAAAGAATCGAGG+TGG - chr1_3:69123455-69123474 Msa0136890:three_prime_UTR 35.0%
! TTGATGGTTTCGATGAAGAT+CGG + chr1_3:69123663-69123682 None:intergenic 35.0%
TGAATTTACTGGAAAAGGAG+CGG - chr1_3:69123843-69123862 Msa0136890:CDS 35.0%
TCTAGATCATTCTTCGAGAT+TGG - chr1_3:69123951-69123970 Msa0136890:intron 35.0%
ATAAATTGCCCAAACCAAAC+AGG + chr1_3:69124374-69124393 None:intergenic 35.0%
GAAAGTCAAATTGGAGCAAA+TGG + chr1_3:69124574-69124593 None:intergenic 35.0%
!! GCTCCAATTTGACTTTCTTT+TGG - chr1_3:69124577-69124596 Msa0136890:CDS 35.0%
AACATTCATGATACGTCCAA+GGG + chr1_3:69124761-69124780 None:intergenic 35.0%
TAACATTCATGATACGTCCA+AGG + chr1_3:69124762-69124781 None:intergenic 35.0%
GGACGTATCATGAATGTTAT+TGG - chr1_3:69124763-69124782 Msa0136890:CDS 35.0%
AATTCGCCTTTATGATCGAT+AGG + chr1_3:69124793-69124812 None:intergenic 35.0%
GATCCTTGTTACTGGTATTA+AGG - chr1_3:69124988-69125007 Msa0136890:CDS 35.0%
GCTGAGTGTTTCCATATAAT+AGG - chr1_3:69125291-69125310 Msa0136890:intron 35.0%
GAGTGTTTCCATATAATAGG+TGG - chr1_3:69125294-69125313 Msa0136890:intron 35.0%
CAGAGAAACCACCTATTATA+TGG + chr1_3:69125305-69125324 None:intergenic 35.0%
TACAGAGAAATGATTGAGAG+TGG - chr1_3:69125369-69125388 Msa0136890:intron 35.0%
GAACACATGTTCTTTGTGTT+TGG - chr1_3:69125824-69125843 Msa0136890:intron 35.0%
GTGCAAAAAGCAAGTAGAAA+AGG + chr1_3:69125954-69125973 None:intergenic 35.0%
TAGTCCCTTAACTTAATCTC+AGG - chr1_3:69126087-69126106 Msa0136890:intron 35.0%
TCAAATGCAGATGAACCAAT+AGG + chr1_3:69126154-69126173 None:intergenic 35.0%
! AAATCCACGGTTTTCTTTTG+CGG - chr1_3:69126187-69126206 Msa0136890:intron 35.0%
CTTAATTTCAGGCAACAGTT+AGG + chr1_3:69126327-69126346 None:intergenic 35.0%
TGTTGCCTGAAATTAAGTCA+AGG - chr1_3:69126330-69126349 Msa0136890:CDS 35.0%
TAAACACAAGCAGTTCGATT+TGG - chr1_3:69126630-69126649 Msa0136890:intron 35.0%
!! TGTTCATGGTTTGGTTAGTA+TGG + chr1_3:69126693-69126712 None:intergenic 35.0%
ACTAACCAAACCATGAACAA+CGG - chr1_3:69126694-69126713 Msa0136890:intron 35.0%
ATGATGCCTGATGTAATTGT+AGG - chr1_3:69126802-69126821 Msa0136890:CDS 35.0%
! AGTTAGCCTACAATTACATC+AGG + chr1_3:69126811-69126830 None:intergenic 35.0%
ATACGAGATGTTGAATCCAA+TGG + chr1_3:69127196-69127215 None:intergenic 35.0%
! TATCATTGCTATTCTGGGAA+TGG - chr1_3:69127303-69127322 Msa0136890:intron 35.0%
TCAACTCAACATATTTGCCT+GGG + chr1_3:69127429-69127448 None:intergenic 35.0%
TTCAACTCAACATATTTGCC+TGG + chr1_3:69127430-69127449 None:intergenic 35.0%
!! AGGCAAATATGTTGAGTTGA+AGG - chr1_3:69127429-69127448 Msa0136890:intron 35.0%
! ATTAGTTGTTGTTCCAAGCA+TGG - chr1_3:69127533-69127552 Msa0136890:intron 35.0%
!!! CGATACCTGTTAGTTTTGTT+TGG - chr1_3:69127644-69127663 Msa0136890:intron 35.0%
AGCTTCCAAACAAAACTAAC+AGG + chr1_3:69127652-69127671 None:intergenic 35.0%
!!! GTTTTTTCACTGGGTGAAAA+TGG - chr1_3:69127749-69127768 Msa0136890:intron 35.0%
! TATAAAATGCCTGCTCTGAA+AGG + chr1_3:69128066-69128085 None:intergenic 35.0%
! TTCAGAGCAGGCATTTTATA+TGG - chr1_3:69128066-69128085 Msa0136890:CDS 35.0%
TATCGATGAAGTCATTGCAA+AGG - chr1_3:69128096-69128115 Msa0136890:CDS 35.0%
TAGATGAAGGACAAAATGAG+GGG + chr1_3:69128177-69128196 None:intergenic 35.0%
CAACAAACACTCAGAATGAA+AGG + chr1_3:69128295-69128314 None:intergenic 35.0%
TAATAAGTGGAAGATGCAAG+AGG - chr1_3:69128375-69128394 Msa0136890:five_prime_UTR 35.0%
! TCTACTTGCTGAATTTGTGA+TGG - chr1_3:69128482-69128501 Msa0136890:five_prime_UTR 35.0%
AATGAAGATGCTAGGGTTTG+TGG + chr1_3:69123545-69123564 None:intergenic 40.0%
GAGAGAGAATGAAGATGCTA+GGG + chr1_3:69123552-69123571 None:intergenic 40.0%
AGAGAGAGAATGAAGATGCT+AGG + chr1_3:69123553-69123572 None:intergenic 40.0%
! ATCAGTAATTTTCCCACCTC+CGG + chr1_3:69123824-69123843 None:intergenic 40.0%
GGTCAAGTTTGTCAGGTTAT+TGG - chr1_3:69123868-69123887 Msa0136890:CDS 40.0%
TTCAAATCTGACGTCAACGA+CGG + chr1_3:69123896-69123915 None:intergenic 40.0%
GTTGACGTCAGATTTGAAGA+AGG - chr1_3:69123898-69123917 Msa0136890:intron 40.0%
TCATTCTTCGAGATTGGTGT+TGG - chr1_3:69123957-69123976 Msa0136890:intron 40.0%
TGTTGTGAGAACCATTGCTA+TGG - chr1_3:69124005-69124024 Msa0136890:intron 40.0%
TTCAGTAGCATCCATAGCAA+TGG + chr1_3:69124019-69124038 None:intergenic 40.0%
ATTGCTATGGATGCTACTGA+AGG - chr1_3:69124018-69124037 Msa0136890:intron 40.0%
TATGTTGCGTTTCATGGATC+TGG - chr1_3:69124202-69124221 Msa0136890:intron 40.0%
ATGTTGCGTTTCATGGATCT+GGG - chr1_3:69124203-69124222 Msa0136890:intron 40.0%
! TCTTTTTAATGGCGCCTGTT+TGG - chr1_3:69124357-69124376 Msa0136890:intron 40.0%
GTCAGTGCTACATAGCTATA+TGG - chr1_3:69124519-69124538 Msa0136890:CDS 40.0%
! TATTGCATTTAGGTTCCCGT+TGG - chr1_3:69124727-69124746 Msa0136890:CDS 40.0%
GGAGAACCTATCGATCATAA+AGG - chr1_3:69124784-69124803 Msa0136890:intron 40.0%
GAACAACAGATCCTTGTTAC+TGG - chr1_3:69124980-69124999 Msa0136890:CDS 40.0%
GGAGGAAAGATTGGATTGTT+TGG - chr1_3:69125135-69125154 Msa0136890:intron 40.0%
GGAAAGATTGGATTGTTTGG+TGG - chr1_3:69125138-69125157 Msa0136890:intron 40.0%
AACAATGTTGCTAAGGCTCA+TGG - chr1_3:69125201-69125220 Msa0136890:intron 40.0%
! AAGCGCCAAAGCATTAAGTT+AGG + chr1_3:69125232-69125251 None:intergenic 40.0%
TGTACAAGTCATTACCCTCA+CGG + chr1_3:69125353-69125372 None:intergenic 40.0%
AGCAAATGTGCTCTTGTGTA+TGG - chr1_3:69125518-69125537 Msa0136890:intron 40.0%
TGGTGCTTACTTGAGTAAAG+CGG + chr1_3:69125661-69125680 None:intergenic 40.0%
CAGTTCAATAGCACACAGTT+CGG + chr1_3:69125778-69125797 None:intergenic 40.0%
! ACTGTGTGCTATTGAACTGT+TGG - chr1_3:69125779-69125798 Msa0136890:intron 40.0%
GCAAGTTTCAGACACAAACA+CGG + chr1_3:69125884-69125903 None:intergenic 40.0%
! GCAGTTTGTCCTTTTGCATA+TGG + chr1_3:69126285-69126304 None:intergenic 40.0%
CATTACCGTTGTTCATGGTT+TGG + chr1_3:69126702-69126721 None:intergenic 40.0%
CCAAACATTACCGTTGTTCA+TGG + chr1_3:69126707-69126726 None:intergenic 40.0%
CCATGAACAACGGTAATGTT+TGG - chr1_3:69126704-69126723 Msa0136890:intron 40.0%
GTAATTGTAGGCTAACTCAG+AGG - chr1_3:69126814-69126833 Msa0136890:CDS 40.0%
GATCAGTAGACAATGTTGGT+TGG + chr1_3:69126880-69126899 None:intergenic 40.0%
CCAAGATCAGTAGACAATGT+TGG + chr1_3:69126884-69126903 None:intergenic 40.0%
CCAACATTGTCTACTGATCT+TGG - chr1_3:69126881-69126900 Msa0136890:intron 40.0%
ACATTGTCTACTGATCTTGG+AGG - chr1_3:69126884-69126903 Msa0136890:intron 40.0%
CGTATTACAACCACCAAGAA+GGG - chr1_3:69126917-69126936 Msa0136890:intron 40.0%
AGAGGTAATTGAACCCTTCT+TGG + chr1_3:69126933-69126952 None:intergenic 40.0%
TACAACAGTGTTGTCTAGAC+AGG - chr1_3:69127027-69127046 Msa0136890:intron 40.0%
TGCTCATCACCCAAAATAAG+TGG + chr1_3:69127226-69127245 None:intergenic 40.0%
CAACTCAACATATTTGCCTG+GGG + chr1_3:69127428-69127447 None:intergenic 40.0%
AGACAATAAACCACAAGGCA+AGG + chr1_3:69127565-69127584 None:intergenic 40.0%
GAATTGCATCGTACTCGAAA+TGG - chr1_3:69127696-69127715 Msa0136890:intron 40.0%
TCTATCTGATATGGACCTCT+TGG - chr1_3:69127727-69127746 Msa0136890:intron 40.0%
!!! GACCTCTTGGTTTTTTCACT+GGG - chr1_3:69127740-69127759 Msa0136890:intron 40.0%
AAATGGATCTCTCTTTGTGC+TGG - chr1_3:69127766-69127785 Msa0136890:intron 40.0%
GTATAACTTACAGGGTGTGT+TGG - chr1_3:69128024-69128043 Msa0136890:CDS 40.0%
ATATGATGACCTTTCAGAGC+AGG - chr1_3:69128054-69128073 Msa0136890:CDS 40.0%
! GAGCAGGCATTTTATATGGT+CGG - chr1_3:69128070-69128089 Msa0136890:CDS 40.0%
TCTCTCTCTCTCATCGAAGA+TGG - chr1_3:69123594-69123613 Msa0136890:three_prime_UTR 45.0%
TTTCGATGAAGATCGGCGAA+GGG + chr1_3:69123656-69123675 None:intergenic 45.0%
ATAAGGTGAAGCGCGAGATT+GGG + chr1_3:69123713-69123732 None:intergenic 45.0%
CGGTTTAAGAGGTAGCCATA+AGG + chr1_3:69123730-69123749 None:intergenic 45.0%
! TCAGTAATTTTCCCACCTCC+GGG + chr1_3:69123823-69123842 None:intergenic 45.0%
TTTACTGGAAAAGGAGCGGT+CGG - chr1_3:69123847-69123866 Msa0136890:CDS 45.0%
ACCTCAAGAGCAGTCAAGAT+CGG + chr1_3:69123931-69123950 None:intergenic 45.0%
!! TTCGAGATTGGTGTTGGAAG+TGG - chr1_3:69123963-69123982 Msa0136890:intron 45.0%
TTGGAAGTGGCTCAGCATTT+GGG - chr1_3:69123976-69123995 Msa0136890:intron 45.0%
TTAATGGCGCCTGTTTGGTT+TGG - chr1_3:69124362-69124381 Msa0136890:intron 45.0%
! TAATGGCGCCTGTTTGGTTT+GGG - chr1_3:69124363-69124382 Msa0136890:intron 45.0%
CAGAGTAACACAGACACATG+TGG + chr1_3:69124500-69124519 None:intergenic 45.0%
GGACTTGAATCTTGCAAGCA+CGG - chr1_3:69124598-69124617 Msa0136890:CDS 45.0%
! AGCACGGATTTTCCTGCTAT+TGG - chr1_3:69124614-69124633 Msa0136890:CDS 45.0%
GCAGGAGCTTCTCTATGAAT+AGG + chr1_3:69124941-69124960 None:intergenic 45.0%
GTTGCTTGCTCAACAAAAGC+AGG + chr1_3:69124959-69124978 None:intergenic 45.0%
ATCTTTCCTCCCCTTTGGTA+TGG + chr1_3:69125126-69125145 None:intergenic 45.0%
TACCAAAGGGGAGGAAAGAT+TGG - chr1_3:69125126-69125145 Msa0136890:intron 45.0%
ATCCAATCTTTCCTCCCCTT+TGG + chr1_3:69125131-69125150 None:intergenic 45.0%
!! ATTGGATTGTTTGGTGGTGC+TGG - chr1_3:69125144-69125163 Msa0136890:intron 45.0%
!! TGGTGCTGGTGTAGGAAAAA+CGG - chr1_3:69125158-69125177 Msa0136890:intron 45.0%
! TTCTCTGTGTTTGCTGGTGT+TGG - chr1_3:69125318-69125337 Msa0136890:intron 45.0%
GTACAAGTCATTACCCTCAC+GGG + chr1_3:69125352-69125371 None:intergenic 45.0%
!! TGAGAGTGGTGTCATTAAGC+TGG - chr1_3:69125383-69125402 Msa0136890:intron 45.0%
!! GAGAGTGGTGTCATTAAGCT+GGG - chr1_3:69125384-69125403 Msa0136890:intron 45.0%
CATTAAGCTGGGTGAAAAGC+AGG - chr1_3:69125395-69125414 Msa0136890:intron 45.0%
TAAGTCCAGTAAGACCGACA+CGG + chr1_3:69125574-69125593 None:intergenic 45.0%
CATCTTGTCCTTCAGCATCA+CGG + chr1_3:69125613-69125632 None:intergenic 45.0%
CAATAGCACACAGTTCGGTT+TGG + chr1_3:69125773-69125792 None:intergenic 45.0%
!! TCACACACAGTTTGCTGCAA+TGG - chr1_3:69126406-69126425 Msa0136890:CDS 45.0%
! TAGGGAAGCATAAGAACCAC+TGG - chr1_3:69126572-69126591 Msa0136890:CDS 45.0%
!! CAAGCAGTTCGATTTGGTGA+AGG - chr1_3:69126636-69126655 Msa0136890:intron 45.0%
AGATGGAATACGACCAAGCA+GGG + chr1_3:69126846-69126865 None:intergenic 45.0%
GCGTATTACAACCACCAAGA+AGG - chr1_3:69126916-69126935 Msa0136890:intron 45.0%
GGTAATTGAACCCTTCTTGG+TGG + chr1_3:69126930-69126949 None:intergenic 45.0%
CACATAGATAGCTTGGACAG+AGG + chr1_3:69126951-69126970 None:intergenic 45.0%
GGATCTGTCAAATCATCAGC+AGG + chr1_3:69126974-69126993 None:intergenic 45.0%
TGTAGCATCCAAGTGAGCAA+AGG + chr1_3:69127011-69127030 None:intergenic 45.0%
CTATCCTGCTGTTGATCCAT+TGG - chr1_3:69127177-69127196 Msa0136890:CDS 45.0%
GAATCCAATGGATCAACAGC+AGG + chr1_3:69127184-69127203 None:intergenic 45.0%
GGAGAACACTCAAAGTTTCC+AGG - chr1_3:69127450-69127469 Msa0136890:intron 45.0%
ATGGAAGAAACCTTGCCTTG+TGG - chr1_3:69127552-69127571 Msa0136890:intron 45.0%
!!! GGACCTCTTGGTTTTTTCAC+TGG - chr1_3:69127739-69127758 Msa0136890:intron 45.0%
CACCCAGTGAAAAAACCAAG+AGG + chr1_3:69127745-69127764 None:intergenic 45.0%
TTGTGCTGGACCTATTCCTT+AGG - chr1_3:69127780-69127799 Msa0136890:intron 45.0%
GTCATCTGTGAACTAGTGCA+TGG - chr1_3:69127982-69128001 Msa0136890:CDS 45.0%
AACTTACAGGGTGTGTTGGA+TGG - chr1_3:69128028-69128047 Msa0136890:CDS 45.0%
! CAGGCATTTTATATGGTCGG+TGG - chr1_3:69128073-69128092 Msa0136890:CDS 45.0%
AAAGGCAGAGAAGATTGCCA+AGG - chr1_3:69128114-69128133 Msa0136890:CDS 45.0%
!! TGAAGATGCTGCTGATTCCT+TGG + chr1_3:69128134-69128153 None:intergenic 45.0%
TGAAGGACAAAATGAGGGGA+GGG + chr1_3:69128173-69128192 None:intergenic 45.0%
ATGAAGGACAAAATGAGGGG+AGG + chr1_3:69128174-69128193 None:intergenic 45.0%
! TTCTGAGTGTTTGTTGCCGA+CGG - chr1_3:69128299-69128318 Msa0136890:CDS 45.0%
AACTTGGTACATCTCACCGT+CGG + chr1_3:69128318-69128337 None:intergenic 45.0%
GTGAGATGTACCAAGTTCTG+TGG - chr1_3:69128321-69128340 Msa0136890:exon 45.0%
!!! ATAATTAAATTAAATTTTGT+TGG - chr1_3:69126039-69126058 Msa0136890:intron 5.0%
CGATGAGAGAGAGAGAGAGA+GGG + chr1_3:69123590-69123609 None:intergenic 50.0%
TCGATGAGAGAGAGAGAGAG+AGG + chr1_3:69123591-69123610 None:intergenic 50.0%
GAAGATGGCTTCACGCAGAT+TGG - chr1_3:69123609-69123628 Msa0136890:intron 50.0%
GTTTCGATGAAGATCGGCGA+AGG + chr1_3:69123657-69123676 None:intergenic 50.0%
GACGTTGAGGCAGTGATTGA+TGG + chr1_3:69123679-69123698 None:intergenic 50.0%
CATAAGGTGAAGCGCGAGAT+TGG + chr1_3:69123714-69123733 None:intergenic 50.0%
CAATCTCGCGCTTCACCTTA+TGG - chr1_3:69123712-69123731 Msa0136890:intron 50.0%
AGTCAGCAACGCGGTTTAAG+AGG + chr1_3:69123741-69123760 None:intergenic 50.0%
TCAAGAGCAGTCAAGATCGG+AGG + chr1_3:69123928-69123947 None:intergenic 50.0%
TCCGATCTTGACTGCTCTTG+AGG - chr1_3:69123927-69123946 Msa0136890:intron 50.0%
GTTGGAAGTGGCTCAGCATT+TGG - chr1_3:69123975-69123994 Msa0136890:intron 50.0%
!! GCTACTGAAGGTGTTGTTCG+TGG - chr1_3:69124030-69124049 Msa0136890:intron 50.0%
!! CTGAAGGTGTTGTTCGTGGA+TGG - chr1_3:69124034-69124053 Msa0136890:intron 50.0%
GGATGGAGAGTTCTCAACAC+TGG - chr1_3:69124051-69124070 Msa0136890:intron 50.0%
! CATTTAGGTTCCCGTTGGCA+GGG - chr1_3:69124732-69124751 Msa0136890:CDS 50.0%
ACCTGCTTGCACCATACCAA+AGG - chr1_3:69125112-69125131 Msa0136890:intron 50.0%
CCTGCTTGCACCATACCAAA+GGG - chr1_3:69125113-69125132 Msa0136890:intron 50.0%
CTGCTTGCACCATACCAAAG+GGG - chr1_3:69125114-69125133 Msa0136890:intron 50.0%
!! TTGTTTGGTGGTGCTGGTGT+AGG - chr1_3:69125150-69125169 Msa0136890:intron 50.0%
GGTGGTTTCTCTGTGTTTGC+TGG - chr1_3:69125312-69125331 Msa0136890:intron 50.0%
TGTTGGAGAAAGAACCCGTG+AGG - chr1_3:69125335-69125354 Msa0136890:intron 50.0%
GTTGGAGAAAGAACCCGTGA+GGG - chr1_3:69125336-69125355 Msa0136890:intron 50.0%
AAGTCCAGTAAGACCGACAC+GGG + chr1_3:69125573-69125592 None:intergenic 50.0%
GAGCATTTCCGTGATGCTGA+AGG - chr1_3:69125602-69125621 Msa0136890:intron 50.0%
GTAATTGGCAGCAGCAAGCT+TGG - chr1_3:69125846-69125865 Msa0136890:intron 50.0%
AAGGCCGCAAAAGAAAACCG+TGG + chr1_3:69126194-69126213 None:intergenic 50.0%
CAGATGGAATACGACCAAGC+AGG + chr1_3:69126847-69126866 None:intergenic 50.0%
GGTCGTATTCCATCTGCTGT+TGG - chr1_3:69126851-69126870 Msa0136890:intron 50.0%
!! GGTTGGTAACCAACAGCAGA+TGG + chr1_3:69126863-69126882 None:intergenic 50.0%
CAGCAGGCACATAGATAGCT+TGG + chr1_3:69126958-69126977 None:intergenic 50.0%
AAGTGAGCAAAGGTGGTAGC+AGG + chr1_3:69127001-69127020 None:intergenic 50.0%
TGCTACCACCTTTGCTCACT+TGG - chr1_3:69127000-69127019 Msa0136890:CDS 50.0%
AGCATCCAAGTGAGCAAAGG+TGG + chr1_3:69127008-69127027 None:intergenic 50.0%
GTTGTACACCACGAGCAGTT+TGG + chr1_3:69127252-69127271 None:intergenic 50.0%
CTTAAGTCAGCCTTTCCACG+TGG - chr1_3:69127384-69127403 Msa0136890:intron 50.0%
AAGACTTCTGCCACGTGGAA+AGG + chr1_3:69127397-69127416 None:intergenic 50.0%
GGCAAGGTTTCTTCCATGCT+TGG + chr1_3:69127549-69127568 None:intergenic 50.0%
GGGTTTGTGGAGTGAGAGAG+TGG + chr1_3:69123532-69123551 None:intergenic 55.0%
GAGAGAGGGAGAGAGAGAGA+GGG + chr1_3:69123576-69123595 None:intergenic 55.0%
AGAGAGAGGGAGAGAGAGAG+AGG + chr1_3:69123577-69123596 None:intergenic 55.0%
CAATCACTGCCTCAACGTCG+AGG - chr1_3:69123680-69123699 Msa0136890:three_prime_UTR 55.0%
CGGTTGCATAGTCAGCAACG+CGG + chr1_3:69123750-69123769 None:intergenic 55.0%
AGCGGTCGGTCAAGTTTGTC+AGG - chr1_3:69123861-69123880 Msa0136890:CDS 55.0%
GTGGCTCAGCATTTGGGTGA+AGG - chr1_3:69123982-69124001 Msa0136890:intron 55.0%
! GCATTTAGGTTCCCGTTGGC+AGG - chr1_3:69124731-69124750 Msa0136890:CDS 55.0%
CCCTTTGGTATGGTGCAAGC+AGG + chr1_3:69125116-69125135 None:intergenic 55.0%
CTTGCACCATACCAAAGGGG+AGG - chr1_3:69125117-69125136 Msa0136890:intron 55.0%
GAGCACTACCAAACTGCTCG+TGG - chr1_3:69127241-69127260 Msa0136890:intron 55.0%
CAGTGAAGACTTCTGCCACG+TGG + chr1_3:69127402-69127421 None:intergenic 55.0%
CACGTGGCAGAAGTCTTCAC+TGG - chr1_3:69127400-69127419 Msa0136890:intron 55.0%
GGGCAGTTGACCACAGAACT+TGG + chr1_3:69128334-69128353 None:intergenic 55.0%
!! GGAGGTTAGCCTCGACGTTG+AGG + chr1_3:69123692-69123711 None:intergenic 60.0%
AGGTGAAGCGCGAGATTGGG+AGG + chr1_3:69123710-69123729 None:intergenic 60.0%
AAGAAGGAGGTTCCCGGAGG+TGG - chr1_3:69123808-69123827 Msa0136890:CDS 60.0%
AGAAGGAGGTTCCCGGAGGT+GGG - chr1_3:69123809-69123828 Msa0136890:CDS 60.0%
TCCAAGGGTAGCCCTGCCAA+CGG + chr1_3:69124746-69124765 None:intergenic 60.0%
GGTCAGATGAATGAGCCCCC+TGG - chr1_3:69125539-69125558 Msa0136890:intron 60.0%
!! TCAGAGGTGTCTGCCCTGCT+TGG - chr1_3:69126830-69126849 Msa0136890:intron 60.0%
GCAAAGGTGGTAGCAGGAGC+AGG + chr1_3:69126995-69127014 None:intergenic 60.0%
GAAGTCTTCACTGGTGCCCC+AGG - chr1_3:69127409-69127428 Msa0136890:intron 60.0%
! TTCTTCGCCGGAGGCGCAGA+CGG + chr1_3:69123793-69123812 None:intergenic 65.0%
GGAACCTCCTTCTTCGCCGG+AGG + chr1_3:69123802-69123821 None:intergenic 65.0%
CCGGGAACCTCCTTCTTCGC+CGG + chr1_3:69123805-69123824 None:intergenic 65.0%
CCGGCGAAGAAGGAGGTTCC+CGG - chr1_3:69123802-69123821 Msa0136890:CDS 65.0%
GCGAAGAAGGAGGTTCCCGG+AGG - chr1_3:69123805-69123824 Msa0136890:CDS 65.0%
CCAAGGGTAGCCCTGCCAAC+GGG + chr1_3:69124745-69124764 None:intergenic 65.0%
! CGTGCCCGTGTCGGTCTTAC+TGG - chr1_3:69125566-69125585 Msa0136890:intron 65.0%
AGGCGCAGACGGAGCTGGTG+CGG + chr1_3:69123782-69123801 None:intergenic 70.0%
ACCAGCTCCGTCTGCGCCTC+CGG - chr1_3:69123783-69123802 Msa0136890:exon 70.0%
GTCTGCGCCTCCGGCGAAGA+AGG - chr1_3:69123792-69123811 Msa0136890:CDS 70.0%
TGCGCCTCCGGCGAAGAAGG+AGG - chr1_3:69123795-69123814 Msa0136890:CDS 70.0%
CCCGTTGGCAGGGCTACCCT+TGG - chr1_3:69124742-69124761 Msa0136890:CDS 70.0%
ACACGGGCACGAGCACCAGG+GGG + chr1_3:69125557-69125576 None:intergenic 70.0%
GACACGGGCACGAGCACCAG+GGG + chr1_3:69125558-69125577 None:intergenic 70.0%
CGACACGGGCACGAGCACCA+GGG + chr1_3:69125559-69125578 None:intergenic 70.0%
CCTGGTGCTCGTGCCCGTGT+CGG - chr1_3:69125557-69125576 Msa0136890:intron 70.0%
AGACGGAGCTGGTGCGGCGG+CGG + chr1_3:69123776-69123795 None:intergenic 75.0%
CGCAGACGGAGCTGGTGCGG+CGG + chr1_3:69123779-69123798 None:intergenic 75.0%
CCGACACGGGCACGAGCACC+AGG + chr1_3:69125560-69125579 None:intergenic 75.0%
! AGCTGGTGCGGCGGCGGCAG+CGG + chr1_3:69123770-69123789 None:intergenic 80.0%
!! GCCGGAGGCGCAGACGGAGC+TGG + chr1_3:69123787-69123806 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 69123415 69128533 69123415 ID=Msa0136890;Name=Msa0136890
chr1_3 mRNA 69123415 69128533 69123415 ID=Msa0136890-mRNA-1;Parent=Msa0136890;Name=Msa0136890-mRNA-1;_AED=0.26;_eAED=0.26;_QI=178|1|1|1|0.72|0.58|12|309|559
chr1_3 exon 69123415 69123616 69123415 ID=Msa0136890-mRNA-1:exon:23895;Parent=Msa0136890-mRNA-1
chr1_3 exon 69123642 69123704 69123642 ID=Msa0136890-mRNA-1:exon:23894;Parent=Msa0136890-mRNA-1
chr1_3 exon 69123745 69123911 69123745 ID=Msa0136890-mRNA-1:exon:23893;Parent=Msa0136890-mRNA-1
chr1_3 exon 69124477 69124788 69124477 ID=Msa0136890-mRNA-1:exon:23892;Parent=Msa0136890-mRNA-1
chr1_3 exon 69124900 69125124 69124900 ID=Msa0136890-mRNA-1:exon:23891;Parent=Msa0136890-mRNA-1
chr1_3 exon 69126278 69126436 69126278 ID=Msa0136890-mRNA-1:exon:23890;Parent=Msa0136890-mRNA-1
chr1_3 exon 69126532 69126635 69126532 ID=Msa0136890-mRNA-1:exon:23889;Parent=Msa0136890-mRNA-1
chr1_3 exon 69126726 69126843 69126726 ID=Msa0136890-mRNA-1:exon:23888;Parent=Msa0136890-mRNA-1
chr1_3 exon 69126939 69127027 69126939 ID=Msa0136890-mRNA-1:exon:23887;Parent=Msa0136890-mRNA-1
chr1_3 exon 69127134 69127209 69127134 ID=Msa0136890-mRNA-1:exon:23886;Parent=Msa0136890-mRNA-1
chr1_3 exon 69127862 69128351 69127862 ID=Msa0136890-mRNA-1:exon:23885;Parent=Msa0136890-mRNA-1
chr1_3 exon 69128372 69128533 69128372 ID=Msa0136890-mRNA-1:exon:23884;Parent=Msa0136890-mRNA-1
chr1_3 five_prime_UTR 69128372 69128533 69128372 ID=Msa0136890-mRNA-1:five_prime_utr;Parent=Msa0136890-mRNA-1
chr1_3 five_prime_UTR 69128336 69128351 69128336 ID=Msa0136890-mRNA-1:five_prime_utr;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69127862 69128335 69127862 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69127134 69127209 69127134 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69126939 69127027 69126939 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69126726 69126843 69126726 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69126532 69126635 69126532 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69126278 69126436 69126278 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69124900 69125124 69124900 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69124477 69124788 69124477 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 CDS 69123789 69123911 69123789 ID=Msa0136890-mRNA-1:cds;Parent=Msa0136890-mRNA-1
chr1_3 three_prime_UTR 69123745 69123788 69123745 ID=Msa0136890-mRNA-1:three_prime_utr;Parent=Msa0136890-mRNA-1
chr1_3 three_prime_UTR 69123642 69123704 69123642 ID=Msa0136890-mRNA-1:three_prime_utr;Parent=Msa0136890-mRNA-1
chr1_3 three_prime_UTR 69123415 69123616 69123415 ID=Msa0136890-mRNA-1:three_prime_utr;Parent=Msa0136890-mRNA-1
Gene Sequence

>Msa0136890

ATGGCTTCACGCAGATTGGTATCATCTCTGATTCGATCTTCCCTTCGCCGATCTTCATCGAAACCATCAATCACTGCCTCAACGTCGAGGCTAACCTCCCAATCTCGCGCTTCACCTTATGGCTACCTCTTAAACCGCGTTGCTGACTATGCAACCGCTGCCGCCGCCGCACCAGCTCCGTCTGCGCCTCCGGCGAAGAAGGAGGTTCCCGGAGGTGGGAAAATTACTGATGAATTTACTGGAAAAGGAGCGGTCGGTCAAGTTTGTCAGGTTATTGGTGCCGTCGTTGACGTCAGATTTGAAGAAGGTTTGCCTCCGATCTTGACTGCTCTTGAGGTTCTAGATCATTCTTCGAGATTGGTGTTGGAAGTGGCTCAGCATTTGGGTGAAGGTGTTGTGAGAACCATTGCTATGGATGCTACTGAAGGTGTTGTTCGTGGATGGAGAGTTCTCAACACTGGTTCTCCCATCAGTGTTCCCGTTGGCAGGGCTACCCTTGGACGTATCATGAATGTTATTGGAGAACCTATCGATCATAAAGGCGAATTCAAAACCGAGCATTATTTGCCTATTCATAGAGAAGCTCCTGCTTTTGTTGAGCAAGCAACTGAACAACAGATCCTTGTTACTGGTATTAAGGTTGTAGACCTGCTTGCACCATACCAAAGGGGAGGAAAGATTGGATTGTTTGGTGGTGCTGGTGTAGGAAAAACGGTTCTTATTATGGAACTTATCAACAATGTTGCTAAGGCTCATGGTGGTTTCTCTGTGTTTGCTGGTGTTGGAGAAAGAACCCGTGAGGGTAATGACTTGTACAGAGAAATGATTGAGAGTGGTGTCATTAAGCTGGGTGAAAAGCAGAGTGAGAGCAAATGTGCTCTTGTGTATGGTCAGATGAATGAGCCCCCTGGTGCTCGTGCCCGTGTCGGTCTTACTGGACTTACTGTTGCTGAGCATTTCCGTGATGCTGAAGGACAAGATGTGCTTCTTTTTGTTGACAACATTTTCCGCTTTACTCAAGCTAACTCAGAGGTGTCTGCCCTGCTTGGTCGTATTCCATCTGCTGTTGGTTACCAACCAACATTGTCTACTGATCTTGGAGGTCTTCAAGAGCGTATTACAACCACCAAGAAGGGTTCAATTACCTCTGTCCAAGCTATCTATGTGCCTGCTGATGATTTGACAGATCCTGCTCCTGCTACCACCTTTGCTCACTTGGATGCTACAACAGTGTTGTCTAGACAGATTTCTGAGCTTGGTATCTATCCTGCTGTTGATCCATTGGATTCAACATCTCGTATGCTTTCTCCACTTATTTTGGGTGATGAGCACTACCAAACTGCTCGTGGTGTACAACAAGTTCTTCAAAACTACAAGAATCTTCAAGATATCATTGCTATTCTGGGAATGGATGAACTTAGTGAAGATGATAAATTGACTGTTGCACGTGCCCGTAAAATTCAACGATTCTTAAGTCAGCCTTTCCACGTGGCAGAAGTCTTCACTGGTGCCCCAGGCAAATATGTTGAGTTGAAGGAGAACACTCAAAGTTTCCAGGGTGTGTTGGATGGCAAATATGATGACCTTTCAGAGCAGGCATTTTATATGGTCGGTGGTATCGATGAAGTCATTGCAAAGGCAGAGAAGATTGCCAAGGAATCAGCAGCATCTTCATCTTAG
Protein sequence

>Msa0136890

MASRRLVSSLIRSSLRRSSSKPSITASTSRLTSQSRASPYGYLLNRVADYATAAAAAPAPSAPPAKKEVPGGGKITDEFTGKGAVGQVCQVIGAVVDVRFEEGLPPILTALEVLDHSSRLVLEVAQHLGEGVVRTIAMDATEGVVRGWRVLNTGSPISVPVGRATLGRIMNVIGEPIDHKGEFKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLSTDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPLILGDEHYQTARGVQQVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKENTQSFQGVLDGKYDDLSEQAFYMVGGIDEVIAKAEKIAKESAASSS*