AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0155870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0155870 MtrunA17_Chr1g0166471 92.971 1195 77 2 1 1188 1 1195 0.0 2229
Msa0155870 MtrunA17_Chr1g0187491 59.211 1292 393 23 1 1185 1 1265 0.0 1328
Msa0155870 MtrunA17_Chr2g0281781 33.645 535 268 20 1 480 1 503 2.68e-63 233
Msa0155870 MtrunA17_Chr2g0318031 34.050 558 251 22 1 491 1 508 2.44e-62 232
Msa0155870 MtrunA17_Chr8g0344661 34.979 243 119 5 1 242 1 205 1.14e-31 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0155870 AT5G43310.2 40.796 1282 548 36 1 1179 1 1174 0.0 724
Msa0155870 AT5G43310.4 40.551 1270 544 36 1 1167 1 1162 0.0 706
Msa0155870 AT5G43310.3 40.551 1270 544 36 1 1167 1 1162 0.0 706
Msa0155870 AT5G43310.1 39.059 1339 548 37 1 1179 1 1231 0.0 696
Msa0155870 AT5G43310.5 43.369 1033 418 28 1 943 1 956 0.0 657
Msa0155870 AT1G61100.1 41.246 337 162 10 1 324 1 314 3.10e-63 231
Msa0155870 AT1G61100.2 40.950 337 162 10 1 324 1 313 5.00e-63 231
Msa0155870 AT4G27430.1 34.563 515 268 18 1 485 1 476 1.75e-62 233
Msa0155870 AT4G27430.2 34.563 515 268 18 1 485 1 476 1.75e-62 233
Msa0155870 AT3G14172.1 37.975 237 106 5 7 242 7 203 1.38e-35 147
Msa0155870 AT3G14172.2 35.443 237 104 6 7 242 7 195 8.21e-29 125
Msa0155870 AT1G17360.1 29.918 244 112 3 1 240 1 189 9.33e-28 122
Msa0155870 AT1G72410.1 30.417 240 123 3 1 240 1 196 1.84e-27 121
Msa0155870 AT1G72410.2 30.417 240 123 3 1 240 1 196 2.09e-27 121
Msa0155870 AT3G14172.3 34.021 194 87 5 50 242 12 165 8.00e-19 93.6

Find 281 sgRNAs with CRISPR-Local

Find 547 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTTTCAATAAATAATTT+TGG 0.125059 1_4:-21517558 None:intergenic
GCAATACTGATTCCGAAAAT+TGG 0.139663 1_4:+21517218 Msa0155870:CDS
GTGAAGAACCGCCTACATTT+TGG 0.144291 1_4:-21517984 None:intergenic
CCTTTATCAGCTCCTCTTTC+AGG 0.158311 1_4:-21517919 None:intergenic
TTCCCTATCAGAACTGTTTC+TGG 0.176787 1_4:+21518560 Msa0155870:CDS
TTTCCATTTCAAACTGGTTT+TGG 0.221184 1_4:-21517606 None:intergenic
TTCGGTTTACCCCTTCTTAT+TGG 0.223545 1_4:-21518126 None:intergenic
AAAGTAGAACCTTGAGAATA+TGG 0.244404 1_4:-21519969 None:intergenic
TTGCTATGTAATTGATATTT+CGG 0.254052 1_4:-21517366 None:intergenic
GCATTTCCCTCAATATTTAC+TGG 0.254633 1_4:-21517817 None:intergenic
CAATTCAGCTGGTTGATAAT+TGG 0.258877 1_4:-21517887 None:intergenic
TCAGATCATGCCAATGAAAT+TGG 0.271227 1_4:+21520230 Msa0155870:CDS
CTCATCATGGATTCTCCCCT+TGG 0.277319 1_4:+21517008 Msa0155870:CDS
GGGTACCATATTTGTTCTTA+AGG 0.285305 1_4:-21519221 None:intergenic
CAGTTCTGATAGGGAATCTT+TGG 0.290351 1_4:-21518553 None:intergenic
ACTCAGTTTCAAGCAAATTA+AGG 0.300293 1_4:+21518642 Msa0155870:CDS
AACCAGTTTGAAATGGAAAA+AGG 0.304808 1_4:+21517610 Msa0155870:CDS
TCCAATGGACTAGGTTTATT+CGG 0.311582 1_4:-21518144 None:intergenic
ATGTTATTCAAACACTGATT+TGG 0.314913 1_4:+21517732 Msa0155870:CDS
CACAGATTTGTGAACTTCTT+CGG 0.318693 1_4:-21517440 None:intergenic
TTCATCCTTAAGAACAAATA+TGG 0.322487 1_4:+21519216 Msa0155870:CDS
AGTCAAATCTAAAGGATCTT+TGG 0.322673 1_4:-21517665 None:intergenic
TTTCTCAGGAAGGAAGATTA+AGG 0.327949 1_4:+21515179 Msa0155870:intron
TTTCTCAAGTGTAGAGTTCC+TGG 0.329903 1_4:-21520096 None:intergenic
CTCAGCTACTGGGCACAATA+TGG 0.331389 1_4:+21520205 Msa0155870:CDS
GTTGAGAAGAACAACCTTAA+TGG 0.342119 1_4:-21512468 None:intergenic
TGTGTAAATTAGGTTTGATT+TGG 0.342294 1_4:+21513506 Msa0155870:intron
CGTTAGCACACCTGAGATAC+TGG 0.344479 1_4:+21514281 Msa0155870:CDS
TGATGGCATGGTTGACTTGA+TGG 0.344805 1_4:-21518435 None:intergenic
TTAAGGCGGCTGTTAAAGTT+TGG 0.352341 1_4:+21520167 Msa0155870:CDS
TTATCCAACATCTTAGATCT+TGG 0.354724 1_4:-21518048 None:intergenic
GCCTTCAAGTGGCATAGAAA+TGG 0.356780 1_4:-21513579 None:intergenic
TGCATAAATGCACTGTTTCC+TGG 0.360729 1_4:-21517109 None:intergenic
GTAGAAAATTCATGTCTCTA+TGG 0.365149 1_4:+21516046 Msa0155870:CDS
CTGATTGTTATTGATGCCTT+AGG 0.372566 1_4:-21518722 None:intergenic
AACAGCCGCCTTAACCCTTT+CGG 0.373492 1_4:-21520158 None:intergenic
TTGAAGAGTTCATTGCTGAT+AGG 0.375273 1_4:-21512678 None:intergenic
ATCGACTGGTCTTCTTCCTT+CGG 0.376420 1_4:-21517312 None:intergenic
ACCATTCACTCCAATTTCAT+TGG 0.377073 1_4:-21520240 None:intergenic
AACGGTGGGAAAACAAATTC+AGG 0.377594 1_4:+21516183 Msa0155870:CDS
CCCATTTCTATGCCACTTGA+AGG 0.382899 1_4:+21513578 Msa0155870:CDS
TAACCAAAACCAGTTTGAAA+TGG 0.386484 1_4:+21517603 Msa0155870:CDS
GCAAAGACTGAACATTCTTC+TGG 0.387326 1_4:+21517385 Msa0155870:CDS
GCACCTTCTGAATTCATAGA+AGG 0.389192 1_4:-21518962 None:intergenic
AAATACATCCCACACTGAAA+TGG 0.391049 1_4:+21516149 Msa0155870:CDS
CGTGCACGAAATTCTGAGTA+TGG 0.391898 1_4:+21520002 Msa0155870:CDS
TTGGTTCTCCAAGGTTCCTA+TGG 0.398407 1_4:-21519242 None:intergenic
TCTGTCCTCTGCACCCATTA+AGG 0.398416 1_4:+21512454 Msa0155870:five_prime_UTR
CCTGAAAGAGGAGCTGATAA+AGG 0.399892 1_4:+21517919 Msa0155870:CDS
GTTTCTCATCGTTGATATCA+AGG 0.404605 1_4:-21519093 None:intergenic
GGTTGACTTGATGGTTGGTT+TGG 0.410947 1_4:-21518426 None:intergenic
CCACCAGAAACAGTTCTGAT+AGG 0.414129 1_4:-21518563 None:intergenic
GCGATGTCACGTGGTTTACC+AGG 0.414225 1_4:+21513661 Msa0155870:CDS
AAGAATCACAACTCAGCTAC+TGG 0.415755 1_4:+21520194 Msa0155870:CDS
TTTGCACGTGCTGTTGCTGC+AGG 0.417654 1_4:+21515805 Msa0155870:CDS
TATGCTTCTATAGGTTTGTT+CGG 0.418446 1_4:+21514256 Msa0155870:intron
TCAAGACCTCCAACCTTGTA+AGG 0.420661 1_4:-21515231 None:intergenic
AAGGTGCTTCCATTTGCTTC+AGG 0.422954 1_4:-21515333 None:intergenic
TGCTCAAGATCAAATGGATA+AGG 0.428238 1_4:+21513602 Msa0155870:CDS
AGCAGAAATCTTTCTTCTCT+CGG 0.430111 1_4:-21518846 None:intergenic
CAACATCTTAGATCTTGGTT+TGG 0.430532 1_4:-21518043 None:intergenic
GCACCACCCTTCTCTTGCTT+AGG 0.430866 1_4:-21518689 None:intergenic
AAGAATCACACTACCTTCAT+TGG 0.433393 1_4:-21520267 None:intergenic
TGTTTCTTTGTTTGCAGTGA+TGG 0.434867 1_4:-21518452 None:intergenic
CGTGCTTCATCCAATGGACT+AGG 0.435666 1_4:-21518153 None:intergenic
GAGGTTGAATTCAACTGATA+AGG 0.436286 1_4:+21517504 Msa0155870:CDS
CACTTGTGATTGGTTCTCCA+AGG 0.436342 1_4:-21519251 None:intergenic
CAATACTGATTCCGAAAATT+GGG 0.438108 1_4:+21517219 Msa0155870:CDS
TGGCCTGTTCATTCTCTCCC+AGG 0.443478 1_4:+21517028 Msa0155870:CDS
ATTGTTCTTGTGCCTGAGAA+TGG 0.448018 1_4:+21513636 Msa0155870:CDS
AGGGAATCTTTGGAAGGGTA+AGG 0.449155 1_4:-21518543 None:intergenic
CCCTACTATCCGACTTATCC+AGG 0.450089 1_4:+21517091 Msa0155870:CDS
TTCTGAGTCCATTTCAGTGT+GGG 0.450980 1_4:-21516157 None:intergenic
GAAGAGGCAATTGCAATTCA+AGG 0.453910 1_4:+21514342 Msa0155870:CDS
GTAGAGAAGTCTGCACGATT+AGG 0.454317 1_4:-21516123 None:intergenic
CTTTGTTTGCAGTGATGGCA+TGG 0.455953 1_4:-21518447 None:intergenic
ATACGTGCTTCACTTGTGAT+TGG 0.456390 1_4:-21519261 None:intergenic
CCTTCAAGTGGCATAGAAAT+GGG 0.457201 1_4:-21513578 None:intergenic
TGGAACACTGGCAAAGCACC+TGG 0.458080 1_4:-21517046 None:intergenic
GAAGGCTGCTCAAGATCAAA+TGG 0.458794 1_4:+21513596 Msa0155870:CDS
GGAAATAATTCCATAGGGAT+TGG 0.461155 1_4:+21514363 Msa0155870:CDS
ACAAAGGGCCATTGGAGCTC+AGG 0.461912 1_4:-21520755 None:intergenic
ATATTCTCAAGGTTCTACTT+TGG 0.462744 1_4:+21519971 Msa0155870:CDS
TTCCAAAATTATTTATTGAA+AGG 0.463711 1_4:+21517556 Msa0155870:CDS
GATTTGGTCATAACTGTGAA+TGG 0.465222 1_4:+21513522 Msa0155870:CDS
AGCTTGGAAATTACATCAAT+CGG 0.465229 1_4:+21520041 Msa0155870:CDS
CAAGGTTCTACTTTGGAAGA+TGG 0.467240 1_4:+21519978 Msa0155870:CDS
ATTGACCTTGAATATTAGCT+TGG 0.467631 1_4:-21516982 None:intergenic
AAGTAGAACCTTGAGAATAT+GGG 0.468607 1_4:-21519968 None:intergenic
GGAAACCAAGCTAATATTCA+AGG 0.469213 1_4:+21516977 Msa0155870:intron
TCAGCTAGACAAAGGGCCAT+TGG 0.470944 1_4:-21520763 None:intergenic
AGATGACAAAGATAAAGAAA+TGG 0.471735 1_4:+21519147 Msa0155870:CDS
GGAAGATATAAAACGTATAG+AGG 0.473176 1_4:+21518352 Msa0155870:CDS
AGAAAGTAAATTCCTCAAAG+TGG 0.473440 1_4:-21520453 None:intergenic
ACAACAGTCTTATCAATCAT+AGG 0.474737 1_4:-21519040 None:intergenic
AAGATCTAAGATGTTGGATA+AGG 0.475169 1_4:+21518050 Msa0155870:CDS
TCCTGGATAAGTCGGATAGT+AGG 0.475381 1_4:-21517092 None:intergenic
GTGACATCGCATCCATTCTC+AGG 0.478150 1_4:-21513648 None:intergenic
ACTTTGATCAGCATGTAGTC+GGG 0.479549 1_4:-21517158 None:intergenic
AAACAAGTGGAAAGCAATGA+AGG 0.479950 1_4:+21514487 Msa0155870:CDS
AGAAGTGATTCTGCTATTTG+AGG 0.480061 1_4:+21520684 Msa0155870:three_prime_UTR
AGGACTCACCGAAAGGGTTA+AGG 0.481628 1_4:+21520150 Msa0155870:CDS
GCCAATGAAATTGGAGTGAA+TGG 0.483121 1_4:+21520239 Msa0155870:CDS
TAAAGCACCTCCCACGAGCT+TGG 0.483432 1_4:+21520025 Msa0155870:CDS
ATTCAAGGAAATAATTCCAT+AGG 0.484407 1_4:+21514357 Msa0155870:CDS
ATCGTTGATATCAAGGGCAC+AGG 0.484960 1_4:-21519086 None:intergenic
TGGAAGGGTAAGGATGATCT+TGG 0.485146 1_4:-21518533 None:intergenic
GCAGCCAGGTTGTCCGCCTA+TGG 0.485231 1_4:+21517129 Msa0155870:CDS
ACACAGCCGCCTGAAGCAAA+TGG 0.485624 1_4:+21515324 Msa0155870:CDS
AAAGATCCTTTAGATTTGAC+TGG 0.486545 1_4:+21517667 Msa0155870:CDS
TGAAGAGTTCATTGCTGATA+GGG 0.486644 1_4:-21512677 None:intergenic
TTGAGAAGAACAACCTTAAT+GGG 0.487116 1_4:-21512467 None:intergenic
TAGTTAAACCACGGAGCTCT+AGG 0.487681 1_4:+21518792 Msa0155870:CDS
AGACCGTTGGGCCAATAAGA+AGG 0.489549 1_4:+21518115 Msa0155870:CDS
TTGTACTGCTGTCTGTGCAC+TGG 0.490019 1_4:+21519192 Msa0155870:CDS
GGTATGCCTTCGACTGCATA+AGG 0.496321 1_4:-21517070 None:intergenic
GAAAGCAGTTGTTCCTTACA+AGG 0.498826 1_4:+21515218 Msa0155870:CDS
TGAGGATTCTCATTTACCTC+AGG 0.499698 1_4:-21520122 None:intergenic
GGCAACAAGCTCAATTCAGC+TGG 0.500888 1_4:-21517898 None:intergenic
AACAGTGCATTTATGCAGCC+AGG 0.501107 1_4:+21517115 Msa0155870:CDS
TATACACGTTCCAGTATCTC+AGG 0.501233 1_4:-21514291 None:intergenic
TCAGATGTGGCTGCTGTCAA+TGG 0.501499 1_4:+21517706 Msa0155870:CDS
ACTTACAGTGCCAATCCCTA+TGG 0.501968 1_4:-21514373 None:intergenic
GGCATGGTTGACTTGATGGT+TGG 0.505042 1_4:-21518431 None:intergenic
CTGAAAGAGGAGCTGATAAA+GGG 0.505391 1_4:+21517920 Msa0155870:CDS
ACCGAATAAACCTAGTCCAT+TGG 0.505979 1_4:+21518143 Msa0155870:CDS
AATGAACTCTTCAACAAGGT+TGG 0.506439 1_4:+21512687 Msa0155870:exon
AAATGTAGGCGGTTCTTCAC+AGG 0.507600 1_4:+21517987 Msa0155870:CDS
GAGAGGGAAGGTTTACAGAC+TGG 0.508456 1_4:+21517286 Msa0155870:CDS
TCTCCAGGACTCTCAAAAGC+TGG 0.508606 1_4:-21515744 None:intergenic
TTGAGCTTGTTGCCTGAAAG+AGG 0.509072 1_4:+21517907 Msa0155870:CDS
TACTTTGATCAGCATGTAGT+CGG 0.511799 1_4:-21517159 None:intergenic
CTATCAGAACTACTTGGTGT+AGG 0.513355 1_4:-21518087 None:intergenic
CCATTGGAGCTCAGGAAAAG+AGG 0.514321 1_4:-21520747 None:intergenic
CGTGCTCGTGCTTCATCCAA+TGG 0.516240 1_4:-21518159 None:intergenic
AATGATCCAGTAAATATTGA+GGG 0.517326 1_4:+21517811 Msa0155870:CDS
GGAAATTACATCAATCGGTA+TGG 0.517461 1_4:+21520046 Msa0155870:CDS
GACCGTTGGGCCAATAAGAA+GGG 0.517785 1_4:+21518116 Msa0155870:CDS
TGGTTCTCCAAGGTTCCTAT+GGG 0.517790 1_4:-21519241 None:intergenic
CATAACTGTGAATGGAAAGA+AGG 0.518280 1_4:+21513530 Msa0155870:CDS
ACCCCTTCTTATTGGCCCAA+CGG 0.519584 1_4:-21518118 None:intergenic
GCTCAAGATCAAATGGATAA+GGG 0.523028 1_4:+21513603 Msa0155870:CDS
TTTACGTCTGTCTGATCGAC+TGG 0.523536 1_4:-21517326 None:intergenic
GCTTCGAAACGGCGATAACA+AGG 0.525377 1_4:-21520627 None:intergenic
TCCTCCATAGGCGGACAACC+TGG 0.526889 1_4:-21517133 None:intergenic
CCTGGATAAGTCGGATAGTA+GGG 0.528333 1_4:-21517091 None:intergenic
TGAAAATTTGTGAATGGTCA+CGG 0.529827 1_4:-21520713 None:intergenic
GGGAGAGAATGAACAGGCCA+AGG 0.532488 1_4:-21517025 None:intergenic
CACCAGAAACAGTTCTGATA+GGG 0.533084 1_4:-21518562 None:intergenic
TATGGTACCCATAGGAACCT+TGG 0.533109 1_4:+21519234 Msa0155870:CDS
GATTAAGGAGGATAGTAATG+TGG 0.534555 1_4:+21515194 Msa0155870:CDS
CAATGATCCAGTAAATATTG+AGG 0.535175 1_4:+21517810 Msa0155870:CDS
TTCGGTGAGTCCTTCACCTG+AGG 0.539668 1_4:-21520140 None:intergenic
GCACCTGGGAGAGAATGAAC+AGG 0.539952 1_4:-21517031 None:intergenic
AATCACACTACCTTCATTGG+TGG 0.540126 1_4:-21520264 None:intergenic
AACCTTGAGAATATGGGGTG+CGG 0.540426 1_4:-21519962 None:intergenic
TGCTTAGGTTCATGCAGAAG+AGG 0.540945 1_4:-21518674 None:intergenic
TCGACACAGAAGACATTCCA+TGG 0.541792 1_4:+21517183 Msa0155870:CDS
AGTTCCCGAATGAAGGAAAA+CGG 0.542855 1_4:+21517857 Msa0155870:CDS
CCTATCAGAACTGTTTCTGG+TGG 0.542960 1_4:+21518563 Msa0155870:CDS
ACGTGACACTTATAAAGTAA+AGG 0.543431 1_4:-21520863 None:intergenic
TTCAAGGAAATAATTCCATA+GGG 0.544467 1_4:+21514358 Msa0155870:CDS
ACGTATAGAGGCTTTAAAGA+AGG 0.544709 1_4:+21518364 Msa0155870:CDS
AATGGGTGCAGAGGACAGAC+AGG 0.544821 1_4:-21512450 None:intergenic
ACCTTGAGAATATGGGGTGC+GGG 0.545773 1_4:-21519961 None:intergenic
CAAACCAAGATCTAAGATGT+TGG 0.546643 1_4:+21518044 Msa0155870:CDS
TTTCGACATCGACTCCATAC+CGG 0.547087 1_4:+21515828 Msa0155870:CDS
AAAATGCAGGCCCAAAATGT+AGG 0.547274 1_4:+21517973 Msa0155870:CDS
TCTCGGCTGTTGCTTCGAAA+CGG 0.548968 1_4:-21520638 None:intergenic
GTGAATGGTTCCACCAATGA+AGG 0.549246 1_4:+21520254 Msa0155870:CDS
GTTATGAAGACACACCTTCG+AGG 0.549746 1_4:-21519284 None:intergenic
TGATGTAATTTCCAAGCTCG+TGG 0.549858 1_4:-21520036 None:intergenic
GACTCCGAGTTCCCGAATGA+AGG 0.550593 1_4:+21517850 Msa0155870:CDS
AAGAAGGAGAAAATTGCCTC+AGG 0.552161 1_4:+21513546 Msa0155870:CDS
TGGGGTGCGGGATGTTTCCT+CGG 0.554213 1_4:-21519949 None:intergenic
ACTGCCAGTACTCAGTCTGC+TGG 0.554392 1_4:-21518615 None:intergenic
GACTTACCAGTCAAATCTAA+AGG 0.554520 1_4:-21517673 None:intergenic
AAACTTTGATCCTTTATGCA+CGG 0.554780 1_4:-21518498 None:intergenic
GGAGCTCTAGGACAATTTCA+AGG 0.555550 1_4:+21518804 Msa0155870:CDS
ACACCTTTCGATAGTTCCCC+TGG 0.558995 1_4:-21513679 None:intergenic
GAACCGACTTACGTGTCTCC+AGG 0.559003 1_4:-21515759 None:intergenic
AGAGCTCCGTGGTTTAACTA+AGG 0.560859 1_4:-21518789 None:intergenic
AAGAAACAGACGGAGGACAT+TGG 0.562247 1_4:+21517527 Msa0155870:CDS
AAGACTGTTGTGATGCTTGA+GGG 0.563067 1_4:+21519052 Msa0155870:CDS
GATCTTGAGCAGCCTTCAAG+TGG 0.564742 1_4:-21513590 None:intergenic
TGCACTAGACTACAAAATGC+AGG 0.565964 1_4:+21517960 Msa0155870:CDS
GGATGAAATGGATATAGAGA+GGG 0.567513 1_4:+21517270 Msa0155870:CDS
GCACTGTTTCCTGGATAAGT+CGG 0.567853 1_4:-21517100 None:intergenic
TGCCTTCGACTGCATAAGGA+TGG 0.569650 1_4:-21517066 None:intergenic
TGAAATCTTACAAATTGAAG+AGG 0.569859 1_4:+21514326 Msa0155870:CDS
TTTCTCATCGTTGATATCAA+GGG 0.570208 1_4:-21519092 None:intergenic
GAATGTTACCTAGTTCTAGT+TGG 0.570813 1_4:-21512733 None:intergenic
GAAAGCATGAGAGTGGCCTA+TGG 0.573218 1_4:+21516073 Msa0155870:CDS
AGGTGAAGGACTCACCGAAA+GGG 0.574266 1_4:+21520144 Msa0155870:CDS
TCTGATAGGGAATCTTTGGA+AGG 0.574354 1_4:-21518549 None:intergenic
AGGATGAAATGGATATAGAG+AGG 0.574373 1_4:+21517269 Msa0155870:CDS
TGAGGTAAATGAGAATCCTC+AGG 0.574652 1_4:+21520124 Msa0155870:CDS
TGTAGTCGGGGATCCTCCAT+AGG 0.574800 1_4:-21517145 None:intergenic
GAAAGTAAATTCCTCAAAGT+GGG 0.576384 1_4:-21520452 None:intergenic
CGGGTAAGGCATCTTTGAAG+AGG 0.578595 1_4:+21517485 Msa0155870:CDS
GCATGAACCTAAGCAAGAGA+AGG 0.580604 1_4:+21518682 Msa0155870:CDS
AAAACCAGCAGACTGAGTAC+TGG 0.581304 1_4:+21518611 Msa0155870:CDS
AGAAAACCAAATAAAACAAG+TGG 0.581755 1_4:+21514474 Msa0155870:CDS
GCCAGGTTGTCCGCCTATGG+AGG 0.582828 1_4:+21517132 Msa0155870:CDS
GTGAACTTCTTCGGTTTCAG+TGG 0.583630 1_4:-21517431 None:intergenic
GAGCACACGTGTCTGACACC+AGG 0.585272 1_4:+21520078 Msa0155870:CDS
GATGTAATTTCCAAGCTCGT+GGG 0.585616 1_4:-21520035 None:intergenic
ATTGCCGTGTCTATTATCCA+TGG 0.587443 1_4:-21517200 None:intergenic
TTCCATCCTTATGCAGTCGA+AGG 0.589892 1_4:+21517064 Msa0155870:CDS
ACAGCAGCCACATCTGATGA+AGG 0.590451 1_4:-21517700 None:intergenic
AACTAAGGAAGTCGGACGAA+TGG 0.590497 1_4:-21518774 None:intergenic
AAGCTTCGATTTCAAGCCAT+AGG 0.590742 1_4:-21516089 None:intergenic
TGGTGCTGCAAACAATCCTA+AGG 0.591197 1_4:+21518706 Msa0155870:CDS
AGAATCACAACTCAGCTACT+GGG 0.592893 1_4:+21520195 Msa0155870:CDS
TCAGCAAATGACATCAAAGC+CGG 0.600657 1_4:-21515847 None:intergenic
GACAAAAGAGAATCGCTGCT+AGG 0.600959 1_4:+21518390 Msa0155870:CDS
AAATGACATCAAAGCCGGTA+TGG 0.601021 1_4:-21515842 None:intergenic
AAATGAGAATCCTCAGGTGA+AGG 0.601096 1_4:+21520130 Msa0155870:CDS
GGAGAGAATGAACAGGCCAA+GGG 0.602517 1_4:-21517024 None:intergenic
CTCAGGAAGGAAGATTAAGG+AGG 0.603054 1_4:+21515182 Msa0155870:intron
TTTCTGAGTCCATTTCAGTG+TGG 0.604849 1_4:-21516158 None:intergenic
TTAATTTGCTTGAAACTGAG+TGG 0.605033 1_4:-21518640 None:intergenic
TCGGTTCTGCAGAAAGAGCA+AGG 0.606081 1_4:+21515775 Msa0155870:CDS
CATGAACCTAAGCAAGAGAA+GGG 0.607805 1_4:+21518683 Msa0155870:CDS
GTCACATCCTTCATCAGATG+TGG 0.610196 1_4:+21517693 Msa0155870:CDS
CTGATAGGGAATCTTTGGAA+GGG 0.610358 1_4:-21518548 None:intergenic
AACAAGTGGAAAGCAATGAA+GGG 0.611055 1_4:+21514488 Msa0155870:CDS
TGTGAATGATGACTCAATCA+TGG 0.612634 1_4:+21517774 Msa0155870:CDS
CGATGTCACGTGGTTTACCA+GGG 0.613143 1_4:+21513662 Msa0155870:CDS
ATCAACGATGAGAAACCAAG+AGG 0.613605 1_4:+21519100 Msa0155870:CDS
CAGGTGAAGGACTCACCGAA+AGG 0.614742 1_4:+21520143 Msa0155870:CDS
AGAACAAATATGGTACCCAT+AGG 0.615784 1_4:+21519226 Msa0155870:CDS
AAGCCTTCTATGAATTCAGA+AGG 0.616561 1_4:+21518959 Msa0155870:CDS
AACAACCTTAATGGGTGCAG+AGG 0.617479 1_4:-21512459 None:intergenic
AGCTCACACCAACTAGAACT+AGG 0.617680 1_4:+21512725 Msa0155870:CDS
AATTTCATCTCTATCATCAG+TGG 0.620734 1_4:-21519017 None:intergenic
AATGGAAGCACCTTGTCACA+AGG 0.620770 1_4:+21515342 Msa0155870:CDS
TCAACGATGAGAAACCAAGA+GGG 0.623201 1_4:+21519101 Msa0155870:CDS
TCCCGCACCCCATATTCTCA+AGG 0.624442 1_4:+21519960 Msa0155870:CDS
AGAGGACAGACAGGAAAATG+AGG 0.627562 1_4:-21512441 None:intergenic
TCGTTGATATCAAGGGCACA+GGG 0.630937 1_4:-21519085 None:intergenic
ACCGTTGGGCCAATAAGAAG+GGG 0.632454 1_4:+21518117 Msa0155870:CDS
ATCTAGCAGTCACACTGCCG+AGG 0.633660 1_4:+21519932 Msa0155870:CDS
CTTTGATCAGCATGTAGTCG+GGG 0.635109 1_4:-21517157 None:intergenic
TGGAAAAGAAAGCATGAGAG+TGG 0.636097 1_4:+21516066 Msa0155870:CDS
AGTAGAACCTTGAGAATATG+GGG 0.636460 1_4:-21519967 None:intergenic
GTGCTTCCATTTGCTTCAGG+CGG 0.638764 1_4:-21515330 None:intergenic
CAGCAATGAACTCTTCAACA+AGG 0.641291 1_4:+21512683 Msa0155870:exon
TAAGACTGTTGTGATGCTTG+AGG 0.642521 1_4:+21519051 Msa0155870:CDS
TGAGGGAAATGCTATTGACA+TGG 0.646419 1_4:+21517828 Msa0155870:CDS
AGTGAAGCACGTATCCTCGA+AGG 0.649063 1_4:+21519270 Msa0155870:CDS
GAAATGGATATAGAGAGGGA+AGG 0.651048 1_4:+21517274 Msa0155870:CDS
ACTGCATAAGGATGGAACAC+TGG 0.651978 1_4:-21517058 None:intergenic
TCTGCAGAAAGAGCAAGGAA+TGG 0.655915 1_4:+21515780 Msa0155870:CDS
CATTCCATGGATAATAGACA+CGG 0.656178 1_4:+21517196 Msa0155870:CDS
GTAATTTCCAAGCTCGTGGG+AGG 0.656825 1_4:-21520032 None:intergenic
TGGACTCAGAAAGTAACGGT+GGG 0.657200 1_4:+21516169 Msa0155870:CDS
ATGGACTCAGAAAGTAACGG+TGG 0.657320 1_4:+21516168 Msa0155870:CDS
GAAATTGTCCTAGAGCTCCG+TGG 0.662085 1_4:-21518800 None:intergenic
GGAACACTGGCAAAGCACCT+GGG 0.665869 1_4:-21517045 None:intergenic
CAAGATCAAATGGATAAGGG+TGG 0.666245 1_4:+21513606 Msa0155870:CDS
AGTCCTGGAGACACGTAAGT+CGG 0.667114 1_4:+21515756 Msa0155870:CDS
ACTGATAAGGAAGAAACAGA+CGG 0.669219 1_4:+21517517 Msa0155870:CDS
CGTGGTTTAACTAAGGAAGT+CGG 0.669786 1_4:-21518782 None:intergenic
TTACCAGGGGAACTATCGAA+AGG 0.671985 1_4:+21513676 Msa0155870:CDS
ACTCACCGAAAGGGTTAAGG+CGG 0.674801 1_4:+21520153 Msa0155870:CDS
CATACTCAGAATTTCGTGCA+CGG 0.675649 1_4:-21520001 None:intergenic
GTTTACAGACTGGAGACCGA+AGG 0.676522 1_4:+21517296 Msa0155870:CDS
AGACAGACGTAAATCTAGCA+CGG 0.677192 1_4:+21517336 Msa0155870:CDS
CGACTTCCTTAGTTAAACCA+CGG 0.680430 1_4:+21518783 Msa0155870:CDS
AGTCGGGGATCCTCCATAGG+CGG 0.684813 1_4:-21517142 None:intergenic
GAACCTAAGCAAGAGAAGGG+TGG 0.688918 1_4:+21518686 Msa0155870:CDS
GAGAGAATGAACAGGCCAAG+GGG 0.691412 1_4:-21517023 None:intergenic
TACACTTGAGAAAATTCCTG+AGG 0.691658 1_4:+21520106 Msa0155870:CDS
ATGCAGGCCCAAAATGTAGG+CGG 0.696884 1_4:+21517976 Msa0155870:CDS
AGAATGGATGCGATGTCACG+TGG 0.699807 1_4:+21513652 Msa0155870:CDS
AAATGGGCTGAGCAAACCTG+AGG 0.708672 1_4:-21513562 None:intergenic
GAAATGGACTCAGAAAGTAA+CGG 0.722926 1_4:+21516165 Msa0155870:CDS
GATGTCACGTGGTTTACCAG+GGG 0.735286 1_4:+21513663 Msa0155870:CDS
GATAAGGAAGAAACAGACGG+AGG 0.782208 1_4:+21517520 Msa0155870:CDS
CAGACGTAAATCTAGCACGG+TGG 0.815638 1_4:+21517339 Msa0155870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTTATAAATAAAGTTAA+TGG - chr1_4:21512795-21512814 None:intergenic 10.0%
!!! ATATAGATATTCAATTTTTA+TGG + chr1_4:21520302-21520321 Msa0155870:intron 10.0%
!! AATATATACAATTCCAAAAT+GGG - chr1_4:21512634-21512653 None:intergenic 15.0%
!! AAATATATACAATTCCAAAA+TGG - chr1_4:21512635-21512654 None:intergenic 15.0%
!!! ATTGCAAGATATATATTTTT+TGG + chr1_4:21512831-21512850 Msa0155870:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + chr1_4:21514825-21514844 Msa0155870:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + chr1_4:21514826-21514845 Msa0155870:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr1_4:21514890-21514909 Msa0155870:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr1_4:21514891-21514910 Msa0155870:intron 15.0%
!! TGATAAATCAATATAAGTTT+AGG - chr1_4:21515260-21515279 None:intergenic 15.0%
!! ATATATAATATATAAGAGCA+AGG + chr1_4:21516677-21516696 Msa0155870:intron 15.0%
!! TATATAATATATAAGAGCAA+GGG + chr1_4:21516678-21516697 Msa0155870:intron 15.0%
!! ATTTAAAGATATGTTTCATA+TGG + chr1_4:21516937-21516956 Msa0155870:intron 15.0%
!! TTCCAAAATTATTTATTGAA+AGG + chr1_4:21517556-21517575 Msa0155870:CDS 15.0%
!!! TTCTATTATTTCTAATAATC+AGG + chr1_4:21518325-21518344 Msa0155870:intron 15.0%
!! AAAAAATGAAAATTTGTGAA+TGG - chr1_4:21520722-21520741 None:intergenic 15.0%
!!! GTTTTCAAGTTTATTTTCAT+TGG + chr1_4:21513140-21513159 Msa0155870:intron 20.0%
!! TACAAAAACAAAAATCATGT+TGG - chr1_4:21513176-21513195 None:intergenic 20.0%
!!! ATTTTTGTTTTTGTAACTAG+TGG + chr1_4:21513181-21513200 Msa0155870:intron 20.0%
!!! CATTTTCATTAGTGTAAATT+TGG + chr1_4:21513214-21513233 Msa0155870:intron 20.0%
!! TTAAATTGATCTAAGTTCTT+TGG + chr1_4:21513258-21513277 Msa0155870:intron 20.0%
!!! ATTTCCTTATTTCTTAAACT+CGG - chr1_4:21513342-21513361 None:intergenic 20.0%
!!! TATTTGTTGATAATTCTTGT+TGG + chr1_4:21513722-21513741 Msa0155870:intron 20.0%
!!! TTAATTTTCTATGCTTCTAT+AGG + chr1_4:21514247-21514266 Msa0155870:intron 20.0%
!! TATGAACAATTTAATTGTTG+TGG - chr1_4:21514427-21514446 None:intergenic 20.0%
!!! GTTTTTTGTTTAATACAAGT+TGG - chr1_4:21514591-21514610 None:intergenic 20.0%
!! TTGGATTAACAACTTAATTA+AGG + chr1_4:21514655-21514674 Msa0155870:intron 20.0%
!! TGGATTAACAACTTAATTAA+GGG + chr1_4:21514656-21514675 Msa0155870:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + chr1_4:21514827-21514846 Msa0155870:intron 20.0%
!! AAAGTCGAATATATTGTATT+GGG + chr1_4:21514850-21514869 Msa0155870:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr1_4:21514960-21514979 Msa0155870:intron 20.0%
!!! ATTTTCTACAAATGTAAAAG+TGG + chr1_4:21515621-21515640 Msa0155870:intron 20.0%
!!! ACCATTTTTTACTTAATCAT+TGG + chr1_4:21515916-21515935 Msa0155870:intron 20.0%
!! ACCAATGATTAAGTAAAAAA+TGG - chr1_4:21515920-21515939 None:intergenic 20.0%
!! CAGAAATAATATGCATTTAA+TGG - chr1_4:21515981-21516000 None:intergenic 20.0%
!!! TCTAAATTTTTTCACATTTC+AGG + chr1_4:21516016-21516035 Msa0155870:intron 20.0%
!!! CTAAATTTTTTCACATTTCA+GGG + chr1_4:21516017-21516036 Msa0155870:intron 20.0%
!!! AATTTTCAAAGATATGCTTT+AGG - chr1_4:21516262-21516281 None:intergenic 20.0%
!! AAAAACAAAAAACCTTTACA+TGG - chr1_4:21516435-21516454 None:intergenic 20.0%
!!! GGTTTTTTGTTTTTTGTTTT+TGG + chr1_4:21516441-21516460 Msa0155870:intron 20.0%
!!! TTTGTTTTTGGATAAATTAG+TGG + chr1_4:21516453-21516472 Msa0155870:intron 20.0%
!! AAAACCATTATAAGATTATG+TGG - chr1_4:21516715-21516734 None:intergenic 20.0%
!! TAAAAGTTTGTCAATTTGAT+AGG + chr1_4:21516768-21516787 Msa0155870:intron 20.0%
!! AAATAATCTACGTACATTAA+GGG - chr1_4:21516912-21516931 None:intergenic 20.0%
!! AAAATAATCTACGTACATTA+AGG - chr1_4:21516913-21516932 None:intergenic 20.0%
!!! AACTTCAAAAACAAGTTTTA+AGG + chr1_4:21517249-21517268 Msa0155870:CDS 20.0%
!! TTGCTATGTAATTGATATTT+CGG - chr1_4:21517369-21517388 None:intergenic 20.0%
!!! CACCTTTCAATAAATAATTT+TGG - chr1_4:21517561-21517580 None:intergenic 20.0%
!! TAAATTGTTAAAATTGCATC+AGG + chr1_4:21519566-21519585 Msa0155870:intron 20.0%
!! CAAATTCTATATATAAGCAT+TGG - chr1_4:21519634-21519653 None:intergenic 20.0%
!! CAATGCTTATATATAGAATT+TGG + chr1_4:21519632-21519651 Msa0155870:intron 20.0%
!! TATAGAATTTGGATATGATA+TGG + chr1_4:21519643-21519662 Msa0155870:intron 20.0%
!! TTTATTTGAATTCTGTGTAT+GGG + chr1_4:21519816-21519835 Msa0155870:intron 20.0%
!! ATATATTATCTTCCAAATTC+AGG + chr1_4:21519869-21519888 Msa0155870:intron 20.0%
!!! TATTCATTTTAACCTGAATT+TGG - chr1_4:21519884-21519903 None:intergenic 20.0%
!! CATAACAAATCAAAATATGA+TGG - chr1_4:21520421-21520440 None:intergenic 20.0%
!!! TTGTCATTATCTTTTTTTCT+CGG - chr1_4:21520658-21520677 None:intergenic 20.0%
!! GAATGATCATTGATAAAAAA+AGG - chr1_4:21520817-21520836 None:intergenic 20.0%
! AGTCTTACCAATAATTGTTT+CGG + chr1_4:21512886-21512905 Msa0155870:intron 25.0%
! TCATGCAACAAATTCAAATT+GGG + chr1_4:21513023-21513042 Msa0155870:intron 25.0%
! TTTGAGGAGTGATTAATTTA+TGG + chr1_4:21513057-21513076 Msa0155870:intron 25.0%
! TATTTAATTGTCATGTGCAT+TGG + chr1_4:21513108-21513127 Msa0155870:intron 25.0%
! AATTAGCATAGTAACTGTAT+TGG + chr1_4:21513285-21513304 Msa0155870:intron 25.0%
! AGAAATAAGGAAATTTACTG+AGG + chr1_4:21513348-21513367 Msa0155870:intron 25.0%
! GAAATAAGGAAATTTACTGA+GGG + chr1_4:21513349-21513368 Msa0155870:intron 25.0%
! AAATAAGGAAATTTACTGAG+GGG + chr1_4:21513350-21513369 Msa0155870:intron 25.0%
! AAATATCAAAGCAACAAATC+AGG - chr1_4:21513478-21513497 None:intergenic 25.0%
! CAAACCTAATTTACACAAAA+GGG - chr1_4:21513503-21513522 None:intergenic 25.0%
! TCAAACCTAATTTACACAAA+AGG - chr1_4:21513504-21513523 None:intergenic 25.0%
! TGTGTAAATTAGGTTTGATT+TGG + chr1_4:21513506-21513525 Msa0155870:intron 25.0%
! TAATTCTTGTTGGCATATAT+TGG + chr1_4:21513732-21513751 Msa0155870:intron 25.0%
!!! TATTTTTTTGAGCGATTTAG+AGG + chr1_4:21513957-21513976 Msa0155870:intron 25.0%
! ATGTTTCGACAAATGAAAAA+CGG - chr1_4:21514034-21514053 None:intergenic 25.0%
! TAGAACAAAATAGGCTTAAA+GGG - chr1_4:21514070-21514089 None:intergenic 25.0%
!!! ATCACTTATAACTCTAAGAT+TGG + chr1_4:21514165-21514184 Msa0155870:intron 25.0%
! TGAAATCTTACAAATTGAAG+AGG + chr1_4:21514326-21514345 Msa0155870:CDS 25.0%
! ATTCAAGGAAATAATTCCAT+AGG + chr1_4:21514357-21514376 Msa0155870:CDS 25.0%
! TTCAAGGAAATAATTCCATA+GGG + chr1_4:21514358-21514377 Msa0155870:CDS 25.0%
! AGAAAACCAAATAAAACAAG+TGG + chr1_4:21514474-21514493 Msa0155870:CDS 25.0%
!!! TTTGTTTAATACAAGTTGGT+TGG - chr1_4:21514587-21514606 None:intergenic 25.0%
! ATAAGCACTTATCATATAAG+TGG + chr1_4:21514687-21514706 Msa0155870:intron 25.0%
! GAAAGTCGAATATATTGTAT+TGG + chr1_4:21514849-21514868 Msa0155870:intron 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + chr1_4:21514937-21514956 Msa0155870:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + chr1_4:21514938-21514957 Msa0155870:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr1_4:21514959-21514978 Msa0155870:intron 25.0%
!!! TGTTTTCAGCTTATTTCTAT+AGG - chr1_4:21515042-21515061 None:intergenic 25.0%
!!! GAGTATAGAATTTTAGTTGA+TGG + chr1_4:21515413-21515432 Msa0155870:intron 25.0%
! TCGAGAAACTATTATTGATA+TGG + chr1_4:21515490-21515509 Msa0155870:intron 25.0%
! GAAACTATTATTGATATGGT+TGG + chr1_4:21515494-21515513 Msa0155870:intron 25.0%
! TTATTCATCATAAAGCAGTT+GGG - chr1_4:21515550-21515569 None:intergenic 25.0%
! TTTATTCATCATAAAGCAGT+TGG - chr1_4:21515551-21515570 None:intergenic 25.0%
! TATGATGAATAAAGTGACAT+TGG + chr1_4:21515558-21515577 Msa0155870:intron 25.0%
! ACTATGCGAAAGAATTATTA+AGG + chr1_4:21516566-21516585 Msa0155870:intron 25.0%
!! GGTTTTCTTACTTTCATAAA+TGG + chr1_4:21516587-21516606 Msa0155870:intron 25.0%
! ACCAAAATTTGCAGAAATTT+CGG - chr1_4:21516746-21516765 None:intergenic 25.0%
! AATAATCTACGTACATTAAG+GGG - chr1_4:21516911-21516930 None:intergenic 25.0%
!!! AACAAGTTTTAAGGATGAAA+TGG + chr1_4:21517258-21517277 Msa0155870:CDS 25.0%
!! ATGTTATTCAAACACTGATT+TGG + chr1_4:21517732-21517751 Msa0155870:CDS 25.0%
! AATGATCCAGTAAATATTGA+GGG + chr1_4:21517811-21517830 Msa0155870:CDS 25.0%
!!! TTTTTTCTATCAGAACTACT+TGG - chr1_4:21518096-21518115 None:intergenic 25.0%
!! TATTTCTAATAATCAGGAAG+AGG + chr1_4:21518331-21518350 Msa0155870:intron 25.0%
! AGATGACAAAGATAAAGAAA+TGG + chr1_4:21519147-21519166 Msa0155870:CDS 25.0%
! TTCATCCTTAAGAACAAATA+TGG + chr1_4:21519216-21519235 Msa0155870:CDS 25.0%
! AACTAGAGTAGATTTATCAT+TGG + chr1_4:21519304-21519323 Msa0155870:intron 25.0%
!! TGTTTTCTATAGTTTATGCT+TGG + chr1_4:21519494-21519513 Msa0155870:intron 25.0%
! AGAGAAAAAATCTATGAAAG+TGG - chr1_4:21519607-21519626 None:intergenic 25.0%
!!! ATTCTATATATAAGCATTGG+TGG - chr1_4:21519631-21519650 None:intergenic 25.0%
!! ACCTTTAAGTTTAACAGTAT+TGG + chr1_4:21519747-21519766 Msa0155870:intron 25.0%
! GTTTATTTGAATTCTGTGTA+TGG + chr1_4:21519815-21519834 Msa0155870:intron 25.0%
! TCTTAGTACTTCAGTTAATT+TGG + chr1_4:21519845-21519864 Msa0155870:intron 25.0%
!!! TTTATGGCACTTTCTAAAAT+AGG + chr1_4:21520318-21520337 Msa0155870:intron 25.0%
!! AATCAAAATATGATGGTGTT+AGG - chr1_4:21520414-21520433 None:intergenic 25.0%
TTGAGAAGAACAACCTTAAT+GGG - chr1_4:21512470-21512489 None:intergenic 30.0%
!! ATTTTGGTGACTTACTTTAC+AGG - chr1_4:21512606-21512625 None:intergenic 30.0%
! ACCAAAATCTAAACCCATTT+TGG + chr1_4:21512618-21512637 Msa0155870:intron 30.0%
!! TCCAAAATGGGTTTAGATTT+TGG - chr1_4:21512622-21512641 None:intergenic 30.0%
! CAATCTCTCATTTTCAAATC+CGG - chr1_4:21512913-21512932 None:intergenic 30.0%
GTCATGCAACAAATTCAAAT+TGG + chr1_4:21513022-21513041 Msa0155870:intron 30.0%
GAAACCGAGTTTAAGAAATA+AGG + chr1_4:21513335-21513354 Msa0155870:intron 30.0%
TGATAGTTCACTGAAAACAT+TGG + chr1_4:21513435-21513454 Msa0155870:intron 30.0%
! TTCTCCCTTTTGTGTAAATT+AGG + chr1_4:21513496-21513515 Msa0155870:intron 30.0%
CTTTGTACTAAATAGCGTAA+TGG - chr1_4:21513819-21513838 None:intergenic 30.0%
TCAATCACAGATTGCAAAAA+TGG - chr1_4:21513906-21513925 None:intergenic 30.0%
ATTTAGAGGTTTGAGCTTAT+TGG + chr1_4:21513971-21513990 Msa0155870:intron 30.0%
CTAGAACAAAATAGGCTTAA+AGG - chr1_4:21514071-21514090 None:intergenic 30.0%
GGAAAAAGCTAGAACAAAAT+AGG - chr1_4:21514079-21514098 None:intergenic 30.0%
! TATGCTTCTATAGGTTTGTT+CGG + chr1_4:21514256-21514275 Msa0155870:intron 30.0%
!!! TGCTTTCCACTTGTTTTATT+TGG - chr1_4:21514483-21514502 None:intergenic 30.0%
GCTGAAATTCATAATCTGAT+TGG + chr1_4:21514636-21514655 Msa0155870:intron 30.0%
TCAAATAACTCAATCACAAC+AGG + chr1_4:21515136-21515155 Msa0155870:intron 30.0%
AAAAGCAACAAGTTCTCTTA+GGG - chr1_4:21515162-21515181 None:intergenic 30.0%
TGAAATTCATTAAGTGCCAA+TGG + chr1_4:21515451-21515470 Msa0155870:intron 30.0%
! TACTTTTGACAATGCAAAAC+AGG + chr1_4:21515672-21515691 Msa0155870:intron 30.0%
GTAGAAAATTCATGTCTCTA+TGG + chr1_4:21516046-21516065 Msa0155870:CDS 30.0%
TTTACAAGATCAGAATTTGC+TGG - chr1_4:21516221-21516240 None:intergenic 30.0%
ATCCAAGCATGTATATGTAA+GGG - chr1_4:21516338-21516357 None:intergenic 30.0%
TTGAAGTATAGGCTAATAAC+AGG - chr1_4:21516401-21516420 None:intergenic 30.0%
!! CTCTAGATTCTTTGAAGTAT+AGG - chr1_4:21516412-21516431 None:intergenic 30.0%
TCTCCTTCTTAAAATTCCTT+CGG + chr1_4:21516507-21516526 Msa0155870:intron 30.0%
!! AAACCGAAGGAATTTTAAGA+AGG - chr1_4:21516513-21516532 None:intergenic 30.0%
ATAATATATAAGAGCAAGGG+TGG + chr1_4:21516681-21516700 Msa0155870:intron 30.0%
GAAGCCACATAATCTTATAA+TGG + chr1_4:21516708-21516727 Msa0155870:intron 30.0%
! TCCGAAATTTCTGCAAATTT+TGG + chr1_4:21516742-21516761 Msa0155870:intron 30.0%
CTGCCAAGAATAATATATCT+GGG + chr1_4:21516854-21516873 Msa0155870:intron 30.0%
TTGCCCAGATATATTATTCT+TGG - chr1_4:21516860-21516879 None:intergenic 30.0%
ATAATCTACGTACATTAAGG+GGG - chr1_4:21516910-21516929 None:intergenic 30.0%
ATTGACCTTGAATATTAGCT+TGG - chr1_4:21516985-21517004 None:intergenic 30.0%
!! CAATACTGATTCCGAAAATT+GGG + chr1_4:21517219-21517238 Msa0155870:CDS 30.0%
! AGTTTCAATGTCCCAATTTT+CGG - chr1_4:21517233-21517252 None:intergenic 30.0%
!!! TTCAAACTGGTTTTGGTTAA+TGG - chr1_4:21517602-21517621 None:intergenic 30.0%
TAACCAAAACCAGTTTGAAA+TGG + chr1_4:21517603-21517622 Msa0155870:CDS 30.0%
!! TTTCCATTTCAAACTGGTTT+TGG - chr1_4:21517609-21517628 None:intergenic 30.0%
! AACCAGTTTGAAATGGAAAA+AGG + chr1_4:21517610-21517629 Msa0155870:CDS 30.0%
AGTCAAATCTAAAGGATCTT+TGG - chr1_4:21517668-21517687 None:intergenic 30.0%
AAAGATCCTTTAGATTTGAC+TGG + chr1_4:21517667-21517686 Msa0155870:CDS 30.0%
CAATGATCCAGTAAATATTG+AGG + chr1_4:21517810-21517829 Msa0155870:CDS 30.0%
! ATTTTCCGTTTTCCTTCATT+CGG - chr1_4:21517865-21517884 None:intergenic 30.0%
TCACAGGATAAAAAGAACAA+AGG + chr1_4:21518003-21518022 Msa0155870:CDS 30.0%
CACAGGATAAAAAGAACAAA+GGG + chr1_4:21518004-21518023 Msa0155870:CDS 30.0%
ACAGGATAAAAAGAACAAAG+GGG + chr1_4:21518005-21518024 Msa0155870:CDS 30.0%
TTATCCAACATCTTAGATCT+TGG - chr1_4:21518051-21518070 None:intergenic 30.0%
! AAGATCTAAGATGTTGGATA+AGG + chr1_4:21518050-21518069 Msa0155870:CDS 30.0%
GGAAGATATAAAACGTATAG+AGG + chr1_4:21518352-21518371 Msa0155870:CDS 30.0%
AAACTTTGATCCTTTATGCA+CGG - chr1_4:21518501-21518520 None:intergenic 30.0%
!!! TGAGGGTTTTAAAGAATCAT+TGG - chr1_4:21518591-21518610 None:intergenic 30.0%
!! TTAATTTGCTTGAAACTGAG+TGG - chr1_4:21518643-21518662 None:intergenic 30.0%
ACTCAGTTTCAAGCAAATTA+AGG + chr1_4:21518642-21518661 Msa0155870:CDS 30.0%
! GATATTCTGATTTTCAGTTC+TGG - chr1_4:21518908-21518927 None:intergenic 30.0%
!! AATTTCACTTTTCTTCAGCA+AGG - chr1_4:21518987-21519006 None:intergenic 30.0%
AATTTCATCTCTATCATCAG+TGG - chr1_4:21519020-21519039 None:intergenic 30.0%
! ACAACAGTCTTATCAATCAT+AGG - chr1_4:21519043-21519062 None:intergenic 30.0%
TTTCTCATCGTTGATATCAA+GGG - chr1_4:21519095-21519114 None:intergenic 30.0%
GACATTTATAACCATACTCA+CGG - chr1_4:21519400-21519419 None:intergenic 30.0%
!! TGAAAGTGGACTAATGTTTA+AGG - chr1_4:21519593-21519612 None:intergenic 30.0%
GCCAATACTGTTAAACTTAA+AGG - chr1_4:21519751-21519770 None:intergenic 30.0%
AAGTAGAACCTTGAGAATAT+GGG - chr1_4:21519971-21519990 None:intergenic 30.0%
AAAGTAGAACCTTGAGAATA+TGG - chr1_4:21519972-21519991 None:intergenic 30.0%
ATATTCTCAAGGTTCTACTT+TGG + chr1_4:21519971-21519990 Msa0155870:CDS 30.0%
AGCTTGGAAATTACATCAAT+CGG + chr1_4:21520041-21520060 Msa0155870:CDS 30.0%
GAAAGTAAATTCCTCAAAGT+GGG - chr1_4:21520455-21520474 None:intergenic 30.0%
AGAAAGTAAATTCCTCAAAG+TGG - chr1_4:21520456-21520475 None:intergenic 30.0%
TTGATCTTGACATCTGAATA+TGG + chr1_4:21520561-21520580 Msa0155870:intron 30.0%
TGAAAATTTGTGAATGGTCA+CGG - chr1_4:21520716-21520735 None:intergenic 30.0%
ACGTGACACTTATAAAGTAA+AGG - chr1_4:21520866-21520885 None:intergenic 30.0%
GTTGAGAAGAACAACCTTAA+TGG - chr1_4:21512471-21512490 None:intergenic 35.0%
TGAAGAGTTCATTGCTGATA+GGG - chr1_4:21512680-21512699 None:intergenic 35.0%
TTGAAGAGTTCATTGCTGAT+AGG - chr1_4:21512681-21512700 None:intergenic 35.0%
AATGAACTCTTCAACAAGGT+TGG + chr1_4:21512687-21512706 Msa0155870:exon 35.0%
!! GAATGTTACCTAGTTCTAGT+TGG - chr1_4:21512736-21512755 None:intergenic 35.0%
GTCTCAATGATTGTTCGATT+CGG + chr1_4:21512853-21512872 Msa0155870:intron 35.0%
TACCAATAATTGTTTCGGTC+CGG + chr1_4:21512891-21512910 Msa0155870:intron 35.0%
GCAACAAATTCAAATTGGGA+TGG + chr1_4:21513027-21513046 Msa0155870:intron 35.0%
!! TTTCTAGCATCGATTACTGA+AGG - chr1_4:21513319-21513338 None:intergenic 35.0%
! GATTTGGTCATAACTGTGAA+TGG + chr1_4:21513522-21513541 Msa0155870:CDS 35.0%
CATAACTGTGAATGGAAAGA+AGG + chr1_4:21513530-21513549 Msa0155870:CDS 35.0%
TGCTCAAGATCAAATGGATA+AGG + chr1_4:21513602-21513621 Msa0155870:CDS 35.0%
GCTCAAGATCAAATGGATAA+GGG + chr1_4:21513603-21513622 Msa0155870:CDS 35.0%
!! TACAAAGTGTTGTCAGATAG+AGG + chr1_4:21513832-21513851 Msa0155870:intron 35.0%
!! AACGGCTTCTAAAATAGCAT+TGG - chr1_4:21514016-21514035 None:intergenic 35.0%
GGAAATAATTCCATAGGGAT+TGG + chr1_4:21514363-21514382 Msa0155870:CDS 35.0%
TTATTATCTTCTGTGCCTGT+AGG + chr1_4:21514447-21514466 Msa0155870:intron 35.0%
AAACAAGTGGAAAGCAATGA+AGG + chr1_4:21514487-21514506 Msa0155870:CDS 35.0%
AACAAGTGGAAAGCAATGAA+GGG + chr1_4:21514488-21514507 Msa0155870:CDS 35.0%
CAAAGTAGGTCAATTAAACC+GGG - chr1_4:21514790-21514809 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG - chr1_4:21514791-21514810 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr1_4:21514804-21514823 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr1_4:21514973-21514992 Msa0155870:intron 35.0%
!! CTTATTTCTATAGGTTCTCC+TGG - chr1_4:21515033-21515052 None:intergenic 35.0%
TTAAGCACTTGTGAGACTTT+AGG - chr1_4:21515102-21515121 None:intergenic 35.0%
AGTTATTTGAGCTTATCGAC+TGG - chr1_4:21515126-21515145 None:intergenic 35.0%
GAAAAGCAACAAGTTCTCTT+AGG - chr1_4:21515163-21515182 None:intergenic 35.0%
TTTCTCAGGAAGGAAGATTA+AGG + chr1_4:21515179-21515198 Msa0155870:intron 35.0%
GATTAAGGAGGATAGTAATG+TGG + chr1_4:21515194-21515213 Msa0155870:CDS 35.0%
CTAATCATAATCAGTCTGTG+TGG + chr1_4:21515284-21515303 Msa0155870:intron 35.0%
!! CTTTGATTTTCCTTGTGACA+AGG - chr1_4:21515355-21515374 None:intergenic 35.0%
ATATGCATTTAATGGCCAGA+TGG - chr1_4:21515973-21515992 None:intergenic 35.0%
AAATACATCCCACACTGAAA+TGG + chr1_4:21516149-21516168 Msa0155870:CDS 35.0%
! GAAATGGACTCAGAAAGTAA+CGG + chr1_4:21516165-21516184 Msa0155870:CDS 35.0%
GGAAAACAAATTCAGGTACA+TGG + chr1_4:21516190-21516209 Msa0155870:intron 35.0%
AGTCATTACTCATTACTCAC+TGG + chr1_4:21516286-21516305 Msa0155870:intron 35.0%
AACCCTTACATATACATGCT+TGG + chr1_4:21516333-21516352 Msa0155870:intron 35.0%
GATCCAAGCATGTATATGTA+AGG - chr1_4:21516339-21516358 None:intergenic 35.0%
! AAGAATCTAGAGCCATGTAA+AGG + chr1_4:21516420-21516439 Msa0155870:intron 35.0%
! TAGTGGTCATGTTAGTTTCT+AGG + chr1_4:21516470-21516489 Msa0155870:intron 35.0%
! AGTGGTCATGTTAGTTTCTA+GGG + chr1_4:21516471-21516490 Msa0155870:intron 35.0%
!! AATTTTAAGAAGGAGACCCA+GGG - chr1_4:21516503-21516522 None:intergenic 35.0%
! TAAGCGTAGAAACTTGTTTG+AGG + chr1_4:21516612-21516631 Msa0155870:intron 35.0%
TAGTGGAAGGAAGATTTAAC+TGG + chr1_4:21516801-21516820 Msa0155870:intron 35.0%
CCAGATATATTATTCTTGGC+AGG - chr1_4:21516856-21516875 None:intergenic 35.0%
CCTGCCAAGAATAATATATC+TGG + chr1_4:21516853-21516872 Msa0155870:intron 35.0%
GGAAACCAAGCTAATATTCA+AGG + chr1_4:21516977-21516996 Msa0155870:intron 35.0%
! CAAGGTCAATTTTCTCATCA+TGG + chr1_4:21516995-21517014 Msa0155870:CDS 35.0%
TACTTTGATCAGCATGTAGT+CGG - chr1_4:21517162-21517181 None:intergenic 35.0%
CATTCCATGGATAATAGACA+CGG + chr1_4:21517196-21517215 Msa0155870:CDS 35.0%
!! GCAATACTGATTCCGAAAAT+TGG + chr1_4:21517218-21517237 Msa0155870:CDS 35.0%
AGGATGAAATGGATATAGAG+AGG + chr1_4:21517269-21517288 Msa0155870:CDS 35.0%
GGATGAAATGGATATAGAGA+GGG + chr1_4:21517270-21517289 Msa0155870:CDS 35.0%
GAGGTTGAATTCAACTGATA+AGG + chr1_4:21517504-21517523 Msa0155870:CDS 35.0%
ACTGATAAGGAAGAAACAGA+CGG + chr1_4:21517517-21517536 Msa0155870:CDS 35.0%
! CACCTTTTTCCATTTCAAAC+TGG - chr1_4:21517615-21517634 None:intergenic 35.0%
GACTTACCAGTCAAATCTAA+AGG - chr1_4:21517676-21517695 None:intergenic 35.0%
TGTGAATGATGACTCAATCA+TGG + chr1_4:21517774-21517793 Msa0155870:CDS 35.0%
GCATTTCCCTCAATATTTAC+TGG - chr1_4:21517820-21517839 None:intergenic 35.0%
! TTTTCCGTTTTCCTTCATTC+GGG - chr1_4:21517864-21517883 None:intergenic 35.0%
!! CAATTCAGCTGGTTGATAAT+TGG - chr1_4:21517890-21517909 None:intergenic 35.0%
! TAAAAAGAACAAAGGGGCAT+TGG + chr1_4:21518011-21518030 Msa0155870:CDS 35.0%
CAACATCTTAGATCTTGGTT+TGG - chr1_4:21518046-21518065 None:intergenic 35.0%
! CAAACCAAGATCTAAGATGT+TGG + chr1_4:21518044-21518063 Msa0155870:CDS 35.0%
TCTGATAGAAAAAAGACCGT+TGG + chr1_4:21518102-21518121 Msa0155870:CDS 35.0%
CTGATAGAAAAAAGACCGTT+GGG + chr1_4:21518103-21518122 Msa0155870:CDS 35.0%
!! TCCAATGGACTAGGTTTATT+CGG - chr1_4:21518147-21518166 None:intergenic 35.0%
! CCTTCTCTTTCTTCAGTTTT+TGG - chr1_4:21518218-21518237 None:intergenic 35.0%
CCAAAAACTGAAGAAAGAGA+AGG + chr1_4:21518215-21518234 Msa0155870:CDS 35.0%
!! CTCACTCAAGTTGAAGTAAT+TGG + chr1_4:21518240-21518259 Msa0155870:intron 35.0%
!! ACGTATAGAGGCTTTAAAGA+AGG + chr1_4:21518364-21518383 Msa0155870:CDS 35.0%
! TGTTTCTTTGTTTGCAGTGA+TGG - chr1_4:21518455-21518474 None:intergenic 35.0%
! TTTTTGTCAACCGTGCATAA+AGG + chr1_4:21518488-21518507 Msa0155870:CDS 35.0%
! CTGATTGTTATTGATGCCTT+AGG - chr1_4:21518725-21518744 None:intergenic 35.0%
AGCAGAAATCTTTCTTCTCT+CGG - chr1_4:21518849-21518868 None:intergenic 35.0%
!!! TCTGATTTTCAGTTCTGGAA+GGG - chr1_4:21518903-21518922 None:intergenic 35.0%
!!! TTCTGATTTTCAGTTCTGGA+AGG - chr1_4:21518904-21518923 None:intergenic 35.0%
AAGCCTTCTATGAATTCAGA+AGG + chr1_4:21518959-21518978 Msa0155870:CDS 35.0%
GTTTCTCATCGTTGATATCA+AGG - chr1_4:21519096-21519115 None:intergenic 35.0%
GGGTACCATATTTGTTCTTA+AGG - chr1_4:21519224-21519243 None:intergenic 35.0%
AGAACAAATATGGTACCCAT+AGG + chr1_4:21519226-21519245 Msa0155870:CDS 35.0%
CAAAAAGATCACATGCTGTT+AGG - chr1_4:21519430-21519449 None:intergenic 35.0%
! CTGCTAGATGATGATTTTGA+AGG - chr1_4:21519921-21519940 None:intergenic 35.0%
AGTAGAACCTTGAGAATATG+GGG - chr1_4:21519970-21519989 None:intergenic 35.0%
GGAAATTACATCAATCGGTA+TGG + chr1_4:21520046-21520065 Msa0155870:CDS 35.0%
TACACTTGAGAAAATTCCTG+AGG + chr1_4:21520106-21520125 Msa0155870:CDS 35.0%
TCAGATCATGCCAATGAAAT+TGG + chr1_4:21520230-21520249 Msa0155870:CDS 35.0%
ACCATTCACTCCAATTTCAT+TGG - chr1_4:21520243-21520262 None:intergenic 35.0%
AAGAATCACACTACCTTCAT+TGG - chr1_4:21520270-21520289 None:intergenic 35.0%
! TTGAATTGCTTACGCTTTTG+AGG - chr1_4:21520509-21520528 None:intergenic 35.0%
! AGAAGTGATTCTGCTATTTG+AGG + chr1_4:21520684-21520703 Msa0155870:three_prime_UTR 35.0%
! GATGTTTTCAGCTAGACAAA+GGG - chr1_4:21520773-21520792 None:intergenic 35.0%
! TGATGTTTTCAGCTAGACAA+AGG - chr1_4:21520774-21520793 None:intergenic 35.0%
CAGCAATGAACTCTTCAACA+AGG + chr1_4:21512683-21512702 Msa0155870:exon 40.0%
!! TCAATGATTGTTCGATTCGG+AGG + chr1_4:21512856-21512875 Msa0155870:intron 40.0%
ATCCGGACCGAAACAATTAT+TGG - chr1_4:21512896-21512915 None:intergenic 40.0%
!!! TTGGGATGGTTGCTATTTTG+AGG + chr1_4:21513041-21513060 Msa0155870:intron 40.0%
AAGAAGGAGAAAATTGCCTC+AGG + chr1_4:21513546-21513565 Msa0155870:CDS 40.0%
CCTTCAAGTGGCATAGAAAT+GGG - chr1_4:21513581-21513600 None:intergenic 40.0%
CAAGATCAAATGGATAAGGG+TGG + chr1_4:21513606-21513625 Msa0155870:CDS 40.0%
ATTGTTCTTGTGCCTGAGAA+TGG + chr1_4:21513636-21513655 Msa0155870:CDS 40.0%
AATTAGCGACTATAGCGTAG+TGG + chr1_4:21513768-21513787 Msa0155870:intron 40.0%
CTGTGATTGACAACATTGCT+TGG + chr1_4:21513916-21513935 Msa0155870:intron 40.0%
AGAGGTTTGAGCTTATTGGT+TGG + chr1_4:21513975-21513994 Msa0155870:intron 40.0%
!!! TCTAGCTTTTTCCAAAGCAG+AGG + chr1_4:21514086-21514105 Msa0155870:intron 40.0%
!! CTAGCTTTTTCCAAAGCAGA+GGG + chr1_4:21514087-21514106 Msa0155870:intron 40.0%
TATACACGTTCCAGTATCTC+AGG - chr1_4:21514294-21514313 None:intergenic 40.0%
GAAGAGGCAATTGCAATTCA+AGG + chr1_4:21514342-21514361 Msa0155870:CDS 40.0%
!!! TTTGGTTTTCTTCCACCTAC+AGG - chr1_4:21514465-21514484 None:intergenic 40.0%
! GCAATGAAGGGACTTTTGAA+AGG + chr1_4:21514500-21514519 Msa0155870:CDS 40.0%
CCGGTTTAATTGACCTACTT+TGG + chr1_4:21514788-21514807 Msa0155870:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr1_4:21514974-21514993 Msa0155870:intron 40.0%
!! GCTGTTTTCATAAGTCATCC+AGG + chr1_4:21515012-21515031 Msa0155870:intron 40.0%
!!! GAGAACTTGTTGCTTTTCTC+AGG + chr1_4:21515165-21515184 Msa0155870:intron 40.0%
!!! ACTTGTTGCTTTTCTCAGGA+AGG + chr1_4:21515169-21515188 Msa0155870:intron 40.0%
GAAAGCAGTTGTTCCTTACA+AGG + chr1_4:21515218-21515237 Msa0155870:CDS 40.0%
AAATGACATCAAAGCCGGTA+TGG - chr1_4:21515845-21515864 None:intergenic 40.0%
TCAGCAAATGACATCAAAGC+CGG - chr1_4:21515850-21515869 None:intergenic 40.0%
AAGAATCCAGCATCTCACTA+AGG - chr1_4:21515948-21515967 None:intergenic 40.0%
! TGGAAAAGAAAGCATGAGAG+TGG + chr1_4:21516066-21516085 Msa0155870:CDS 40.0%
AAGCTTCGATTTCAAGCCAT+AGG - chr1_4:21516092-21516111 None:intergenic 40.0%
TTCTGAGTCCATTTCAGTGT+GGG - chr1_4:21516160-21516179 None:intergenic 40.0%
TTTCTGAGTCCATTTCAGTG+TGG - chr1_4:21516161-21516180 None:intergenic 40.0%
AACGGTGGGAAAACAAATTC+AGG + chr1_4:21516183-21516202 Msa0155870:CDS 40.0%
!! GAATTTTAAGAAGGAGACCC+AGG - chr1_4:21516504-21516523 None:intergenic 40.0%
GTCAATTTGATAGGTTTCCG+TGG + chr1_4:21516777-21516796 Msa0155870:intron 40.0%
AATCTTCCTTCCACTAACCA+CGG - chr1_4:21516797-21516816 None:intergenic 40.0%
! ATGGACTAAAAACCAACTGC+AGG + chr1_4:21516956-21516975 Msa0155870:intron 40.0%
TGCATAAATGCACTGTTTCC+TGG - chr1_4:21517112-21517131 None:intergenic 40.0%
ACTTTGATCAGCATGTAGTC+GGG - chr1_4:21517161-21517180 None:intergenic 40.0%
ATTGCCGTGTCTATTATCCA+TGG - chr1_4:21517203-21517222 None:intergenic 40.0%
GAAATGGATATAGAGAGGGA+AGG + chr1_4:21517274-21517293 Msa0155870:CDS 40.0%
AGACAGACGTAAATCTAGCA+CGG + chr1_4:21517336-21517355 Msa0155870:CDS 40.0%
GCAAAGACTGAACATTCTTC+TGG + chr1_4:21517385-21517404 Msa0155870:CDS 40.0%
GTGAAGACCTCAAAAAGAAG+AGG + chr1_4:21517460-21517479 Msa0155870:CDS 40.0%
GACCTCAAAAAGAAGAGGAT+CGG + chr1_4:21517465-21517484 Msa0155870:CDS 40.0%
ACCTCAAAAAGAAGAGGATC+GGG + chr1_4:21517466-21517485 Msa0155870:CDS 40.0%
AAAAAGAAGAGGATCGGGTA+AGG + chr1_4:21517471-21517490 Msa0155870:CDS 40.0%
TGAGGGAAATGCTATTGACA+TGG + chr1_4:21517828-21517847 Msa0155870:CDS 40.0%
! TTTTCCTTCATTCGGGAACT+CGG - chr1_4:21517857-21517876 None:intergenic 40.0%
AGTTCCCGAATGAAGGAAAA+CGG + chr1_4:21517857-21517876 Msa0155870:CDS 40.0%
CTGAAAGAGGAGCTGATAAA+GGG + chr1_4:21517920-21517939 Msa0155870:CDS 40.0%
TGCACTAGACTACAAAATGC+AGG + chr1_4:21517960-21517979 Msa0155870:CDS 40.0%
AAAATGCAGGCCCAAAATGT+AGG + chr1_4:21517973-21517992 Msa0155870:CDS 40.0%
! TGAAGAACCGCCTACATTTT+GGG - chr1_4:21517986-21518005 None:intergenic 40.0%
!! CTATCAGAACTACTTGGTGT+AGG - chr1_4:21518090-21518109 None:intergenic 40.0%
TTCGGTTTACCCCTTCTTAT+TGG - chr1_4:21518129-21518148 None:intergenic 40.0%
ACCGAATAAACCTAGTCCAT+TGG + chr1_4:21518143-21518162 Msa0155870:CDS 40.0%
! CTGATAGGGAATCTTTGGAA+GGG - chr1_4:21518551-21518570 None:intergenic 40.0%
TCTGATAGGGAATCTTTGGA+AGG - chr1_4:21518552-21518571 None:intergenic 40.0%
! CAGTTCTGATAGGGAATCTT+TGG - chr1_4:21518556-21518575 None:intergenic 40.0%
TTCCCTATCAGAACTGTTTC+TGG + chr1_4:21518560-21518579 Msa0155870:CDS 40.0%
! CACCAGAAACAGTTCTGATA+GGG - chr1_4:21518565-21518584 None:intergenic 40.0%
CATGAACCTAAGCAAGAGAA+GGG + chr1_4:21518683-21518702 Msa0155870:CDS 40.0%
! GGACGAATGGTACTCATTTT+AGG - chr1_4:21518764-21518783 None:intergenic 40.0%
CGTGGTTTAACTAAGGAAGT+CGG - chr1_4:21518785-21518804 None:intergenic 40.0%
CGACTTCCTTAGTTAAACCA+CGG + chr1_4:21518783-21518802 Msa0155870:CDS 40.0%
GCACCTTCTGAATTCATAGA+AGG - chr1_4:21518965-21518984 None:intergenic 40.0%
TAAGACTGTTGTGATGCTTG+AGG + chr1_4:21519051-21519070 Msa0155870:CDS 40.0%
AAGACTGTTGTGATGCTTGA+GGG + chr1_4:21519052-21519071 Msa0155870:CDS 40.0%
ATCAACGATGAGAAACCAAG+AGG + chr1_4:21519100-21519119 Msa0155870:CDS 40.0%
TCAACGATGAGAAACCAAGA+GGG + chr1_4:21519101-21519120 Msa0155870:CDS 40.0%
ATACGTGCTTCACTTGTGAT+TGG - chr1_4:21519264-21519283 None:intergenic 40.0%
CATAAACATGACCGTGAGTA+TGG + chr1_4:21519386-21519405 Msa0155870:intron 40.0%
TCAAGTAACGTAACTCTTGC+AGG - chr1_4:21519472-21519491 None:intergenic 40.0%
! CAAGGTTCTACTTTGGAAGA+TGG + chr1_4:21519978-21519997 Msa0155870:CDS 40.0%
CATACTCAGAATTTCGTGCA+CGG - chr1_4:21520004-21520023 None:intergenic 40.0%
GATGTAATTTCCAAGCTCGT+GGG - chr1_4:21520038-21520057 None:intergenic 40.0%
TGATGTAATTTCCAAGCTCG+TGG - chr1_4:21520039-21520058 None:intergenic 40.0%
TTTCTCAAGTGTAGAGTTCC+TGG - chr1_4:21520099-21520118 None:intergenic 40.0%
TGAGGATTCTCATTTACCTC+AGG - chr1_4:21520125-21520144 None:intergenic 40.0%
TGAGGTAAATGAGAATCCTC+AGG + chr1_4:21520124-21520143 Msa0155870:CDS 40.0%
AAATGAGAATCCTCAGGTGA+AGG + chr1_4:21520130-21520149 Msa0155870:CDS 40.0%
TTAAGGCGGCTGTTAAAGTT+TGG + chr1_4:21520167-21520186 Msa0155870:CDS 40.0%
AAGAATCACAACTCAGCTAC+TGG + chr1_4:21520194-21520213 Msa0155870:CDS 40.0%
AGAATCACAACTCAGCTACT+GGG + chr1_4:21520195-21520214 Msa0155870:CDS 40.0%
GCCAATGAAATTGGAGTGAA+TGG + chr1_4:21520239-21520258 Msa0155870:CDS 40.0%
AATCACACTACCTTCATTGG+TGG - chr1_4:21520267-21520286 None:intergenic 40.0%
! TTTTCTTAGCTCCCACTTTG+AGG + chr1_4:21520441-21520460 Msa0155870:intron 40.0%
! AACAACCTTAATGGGTGCAG+AGG - chr1_4:21512462-21512481 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAA+GGG - chr1_4:21512558-21512577 None:intergenic 45.0%
AGCTCACACCAACTAGAACT+AGG + chr1_4:21512725-21512744 Msa0155870:CDS 45.0%
! CCCATTTCTATGCCACTTGA+AGG + chr1_4:21513578-21513597 Msa0155870:CDS 45.0%
GCCTTCAAGTGGCATAGAAA+TGG - chr1_4:21513582-21513601 None:intergenic 45.0%
GAAGGCTGCTCAAGATCAAA+TGG + chr1_4:21513596-21513615 Msa0155870:CDS 45.0%
TTACCAGGGGAACTATCGAA+AGG + chr1_4:21513676-21513695 Msa0155870:CDS 45.0%
TCCAAAGCAGAGGGATTTAC+TGG + chr1_4:21514096-21514115 Msa0155870:intron 45.0%
CCAAAGCAGAGGGATTTACT+GGG + chr1_4:21514097-21514116 Msa0155870:intron 45.0%
CAAAGCAGAGGGATTTACTG+GGG + chr1_4:21514098-21514117 Msa0155870:intron 45.0%
AGAGGGATTTACTGGGGAAA+TGG + chr1_4:21514104-21514123 Msa0155870:intron 45.0%
ACTTACAGTGCCAATCCCTA+TGG - chr1_4:21514376-21514395 None:intergenic 45.0%
TTATCTTCTGTGCCTGTAGG+TGG + chr1_4:21514450-21514469 Msa0155870:intron 45.0%
!! GAAGGGACTTTTGAAAGGAC+AGG + chr1_4:21514505-21514524 Msa0155870:CDS 45.0%
GTAGGTCAATTAAACCGGGA+CGG - chr1_4:21514786-21514805 None:intergenic 45.0%
CTCAGGAAGGAAGATTAAGG+AGG + chr1_4:21515182-21515201 Msa0155870:intron 45.0%
GCAGTTGTTCCTTACAAGGT+TGG + chr1_4:21515222-21515241 Msa0155870:intron 45.0%
GTTGTTCCTTACAAGGTTGG+AGG + chr1_4:21515225-21515244 Msa0155870:intron 45.0%
TCAAGACCTCCAACCTTGTA+AGG - chr1_4:21515234-21515253 None:intergenic 45.0%
! AAGGTGCTTCCATTTGCTTC+AGG - chr1_4:21515336-21515355 None:intergenic 45.0%
!! AATGGAAGCACCTTGTCACA+AGG + chr1_4:21515342-21515361 Msa0155870:CDS 45.0%
TTAAGTGCCAATGGCAGACA+TGG + chr1_4:21515460-21515479 Msa0155870:intron 45.0%
GTGATATCCATGTCTGCCAT+TGG - chr1_4:21515470-21515489 None:intergenic 45.0%
CATAAAGCAGTTGGGCATGT+TGG - chr1_4:21515542-21515561 None:intergenic 45.0%
TCTGCAGAAAGAGCAAGGAA+TGG + chr1_4:21515780-21515799 Msa0155870:CDS 45.0%
!! TTTCGACATCGACTCCATAC+CGG + chr1_4:21515828-21515847 Msa0155870:CDS 45.0%
TTAGTGCCTTAGTGAGATGC+TGG + chr1_4:21515939-21515958 Msa0155870:intron 45.0%
ATGCTGGATTCTTCACCATC+TGG + chr1_4:21515955-21515974 Msa0155870:intron 45.0%
GTAGAGAAGTCTGCACGATT+AGG - chr1_4:21516126-21516145 None:intergenic 45.0%
ATGGACTCAGAAAGTAACGG+TGG + chr1_4:21516168-21516187 Msa0155870:CDS 45.0%
TGGACTCAGAAAGTAACGGT+GGG + chr1_4:21516169-21516188 Msa0155870:CDS 45.0%
!! TAGCTTGGTTGGTGAGCTAA+GGG - chr1_4:21516536-21516555 None:intergenic 45.0%
TGATAGGTTTCCGTGGTTAG+TGG + chr1_4:21516784-21516803 Msa0155870:intron 45.0%
! TTAGCTTGGTTTCCTGCAGT+TGG - chr1_4:21516971-21516990 None:intergenic 45.0%
ACTGCATAAGGATGGAACAC+TGG - chr1_4:21517061-21517080 None:intergenic 45.0%
TTCCATCCTTATGCAGTCGA+AGG + chr1_4:21517064-21517083 Msa0155870:CDS 45.0%
CCTGGATAAGTCGGATAGTA+GGG - chr1_4:21517094-21517113 None:intergenic 45.0%
TCCTGGATAAGTCGGATAGT+AGG - chr1_4:21517095-21517114 None:intergenic 45.0%
GCACTGTTTCCTGGATAAGT+CGG - chr1_4:21517103-21517122 None:intergenic 45.0%
AACAGTGCATTTATGCAGCC+AGG + chr1_4:21517115-21517134 Msa0155870:CDS 45.0%
CTTTGATCAGCATGTAGTCG+GGG - chr1_4:21517160-21517179 None:intergenic 45.0%
TCGACACAGAAGACATTCCA+TGG + chr1_4:21517183-21517202 Msa0155870:CDS 45.0%
!! ATCGACTGGTCTTCTTCCTT+CGG - chr1_4:21517315-21517334 None:intergenic 45.0%
TTTACGTCTGTCTGATCGAC+TGG - chr1_4:21517329-21517348 None:intergenic 45.0%
! ACCCGATCCTCTTCTTTTTG+AGG - chr1_4:21517470-21517489 None:intergenic 45.0%
GATAAGGAAGAAACAGACGG+AGG + chr1_4:21517520-21517539 Msa0155870:CDS 45.0%
AAGAAACAGACGGAGGACAT+TGG + chr1_4:21517527-21517546 Msa0155870:CDS 45.0%
GTCACATCCTTCATCAGATG+TGG + chr1_4:21517693-21517712 Msa0155870:CDS 45.0%
!! TTGAGCTTGTTGCCTGAAAG+AGG + chr1_4:21517907-21517926 Msa0155870:CDS 45.0%
CCTTTATCAGCTCCTCTTTC+AGG - chr1_4:21517922-21517941 None:intergenic 45.0%
CCTGAAAGAGGAGCTGATAA+AGG + chr1_4:21517919-21517938 Msa0155870:CDS 45.0%
! GTGAAGAACCGCCTACATTT+TGG - chr1_4:21517987-21518006 None:intergenic 45.0%
AAATGTAGGCGGTTCTTCAC+AGG + chr1_4:21517987-21518006 Msa0155870:CDS 45.0%
GACAAAAGAGAATCGCTGCT+AGG + chr1_4:21518390-21518409 Msa0155870:CDS 45.0%
!! GGTTGACTTGATGGTTGGTT+TGG - chr1_4:21518429-21518448 None:intergenic 45.0%
!! TGATGGCATGGTTGACTTGA+TGG - chr1_4:21518438-21518457 None:intergenic 45.0%
! CTTTGTTTGCAGTGATGGCA+TGG - chr1_4:21518450-21518469 None:intergenic 45.0%
TGGAAGGGTAAGGATGATCT+TGG - chr1_4:21518536-21518555 None:intergenic 45.0%
! AGGGAATCTTTGGAAGGGTA+AGG - chr1_4:21518546-21518565 None:intergenic 45.0%
! CCACCAGAAACAGTTCTGAT+AGG - chr1_4:21518566-21518585 None:intergenic 45.0%
!! CCTATCAGAACTGTTTCTGG+TGG + chr1_4:21518563-21518582 Msa0155870:CDS 45.0%
!!! CTCAGTCTGCTGGTTTTTGA+GGG - chr1_4:21518608-21518627 None:intergenic 45.0%
!!! ACTCAGTCTGCTGGTTTTTG+AGG - chr1_4:21518609-21518628 None:intergenic 45.0%
AAAACCAGCAGACTGAGTAC+TGG + chr1_4:21518611-21518630 Msa0155870:CDS 45.0%
TGCTTAGGTTCATGCAGAAG+AGG - chr1_4:21518677-21518696 None:intergenic 45.0%
GCATGAACCTAAGCAAGAGA+AGG + chr1_4:21518682-21518701 Msa0155870:CDS 45.0%
!! TGGTGCTGCAAACAATCCTA+AGG + chr1_4:21518706-21518725 Msa0155870:CDS 45.0%
AACTAAGGAAGTCGGACGAA+TGG - chr1_4:21518777-21518796 None:intergenic 45.0%
AGAGCTCCGTGGTTTAACTA+AGG - chr1_4:21518792-21518811 None:intergenic 45.0%
TAGTTAAACCACGGAGCTCT+AGG + chr1_4:21518792-21518811 Msa0155870:CDS 45.0%
!! GGAGCTCTAGGACAATTTCA+AGG + chr1_4:21518804-21518823 Msa0155870:CDS 45.0%
! TCGTTGATATCAAGGGCACA+GGG - chr1_4:21519088-21519107 None:intergenic 45.0%
! ATCGTTGATATCAAGGGCAC+AGG - chr1_4:21519089-21519108 None:intergenic 45.0%
!! GCTATCGTTGTTTTCCCTCT+TGG - chr1_4:21519118-21519137 None:intergenic 45.0%
TATGGTACCCATAGGAACCT+TGG + chr1_4:21519234-21519253 Msa0155870:CDS 45.0%
TGGTTCTCCAAGGTTCCTAT+GGG - chr1_4:21519244-21519263 None:intergenic 45.0%
! TTGGTTCTCCAAGGTTCCTA+TGG - chr1_4:21519245-21519264 None:intergenic 45.0%
! CACTTGTGATTGGTTCTCCA+AGG - chr1_4:21519254-21519273 None:intergenic 45.0%
GTTATGAAGACACACCTTCG+AGG - chr1_4:21519287-21519306 None:intergenic 45.0%
AACCTTGAGAATATGGGGTG+CGG - chr1_4:21519965-21519984 None:intergenic 45.0%
CGTGCACGAAATTCTGAGTA+TGG + chr1_4:21520002-21520021 Msa0155870:CDS 45.0%
GTGAATGGTTCCACCAATGA+AGG + chr1_4:21520254-21520273 Msa0155870:CDS 45.0%
!!! TTATATATACTTTTTTTTTA+GGG - chr1_4:21516665-21516684 None:intergenic 5.0%
!!! ATTATATATACTTTTTTTTT+AGG - chr1_4:21516666-21516685 None:intergenic 5.0%
!!! TAGAAAAATAATAATTTTTA+TGG + chr1_4:21520354-21520373 Msa0155870:intron 5.0%
TCTGTCCTCTGCACCCATTA+AGG + chr1_4:21512454-21512473 Msa0155870:five_prime_UTR 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG - chr1_4:21512559-21512578 None:intergenic 50.0%
!! AAATGGGCTGAGCAAACCTG+AGG - chr1_4:21513565-21513584 None:intergenic 50.0%
GATCTTGAGCAGCCTTCAAG+TGG - chr1_4:21513593-21513612 None:intergenic 50.0%
GTGACATCGCATCCATTCTC+AGG - chr1_4:21513651-21513670 None:intergenic 50.0%
AGAATGGATGCGATGTCACG+TGG + chr1_4:21513652-21513671 Msa0155870:CDS 50.0%
CGATGTCACGTGGTTTACCA+GGG + chr1_4:21513662-21513681 Msa0155870:CDS 50.0%
GATGTCACGTGGTTTACCAG+GGG + chr1_4:21513663-21513682 Msa0155870:CDS 50.0%
ACACCTTTCGATAGTTCCCC+TGG - chr1_4:21513682-21513701 None:intergenic 50.0%
AGGGGAACTATCGAAAGGTG+TGG + chr1_4:21513681-21513700 Msa0155870:intron 50.0%
CCCAGTAAATCCCTCTGCTT+TGG - chr1_4:21514100-21514119 None:intergenic 50.0%
CGTTAGCACACCTGAGATAC+TGG + chr1_4:21514281-21514300 Msa0155870:CDS 50.0%
GTCAATTAAACCGGGACGGA+GGG - chr1_4:21514782-21514801 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr1_4:21514978-21514997 Msa0155870:intron 50.0%
GTGCTTCCATTTGCTTCAGG+CGG - chr1_4:21515333-21515352 None:intergenic 50.0%
!! AGTCCAGCTTTTGAGAGTCC+TGG + chr1_4:21515741-21515760 Msa0155870:CDS 50.0%
TCTCCAGGACTCTCAAAAGC+TGG - chr1_4:21515747-21515766 None:intergenic 50.0%
AGTCCTGGAGACACGTAAGT+CGG + chr1_4:21515756-21515775 Msa0155870:CDS 50.0%
TCGGTTCTGCAGAAAGAGCA+AGG + chr1_4:21515775-21515794 Msa0155870:CDS 50.0%
! GAAAGCATGAGAGTGGCCTA+TGG + chr1_4:21516073-21516092 Msa0155870:CDS 50.0%
!! AGTTTCTAGGGTTTGTGCCC+TGG + chr1_4:21516483-21516502 Msa0155870:intron 50.0%
!! GTTTCTAGGGTTTGTGCCCT+GGG + chr1_4:21516484-21516503 Msa0155870:intron 50.0%
!! GTAGCTTGGTTGGTGAGCTA+AGG - chr1_4:21516537-21516556 None:intergenic 50.0%
ACCAACCAAGCTACCTACGT+GGG + chr1_4:21516543-21516562 Msa0155870:intron 50.0%
ATAGTCCCACGTAGGTAGCT+TGG - chr1_4:21516551-21516570 None:intergenic 50.0%
TCTTTCGCATAGTCCCACGT+AGG - chr1_4:21516559-21516578 None:intergenic 50.0%
AGGTTTCCGTGGTTAGTGGA+AGG + chr1_4:21516788-21516807 Msa0155870:intron 50.0%
CTCATCATGGATTCTCCCCT+TGG + chr1_4:21517008-21517027 Msa0155870:CDS 50.0%
GAGAGAATGAACAGGCCAAG+GGG - chr1_4:21517026-21517045 None:intergenic 50.0%
GGAGAGAATGAACAGGCCAA+GGG - chr1_4:21517027-21517046 None:intergenic 50.0%
TGCCTTCGACTGCATAAGGA+TGG - chr1_4:21517069-21517088 None:intergenic 50.0%
GGTATGCCTTCGACTGCATA+AGG - chr1_4:21517073-21517092 None:intergenic 50.0%
CCCTACTATCCGACTTATCC+AGG + chr1_4:21517091-21517110 Msa0155870:CDS 50.0%
GAGAGGGAAGGTTTACAGAC+TGG + chr1_4:21517286-21517305 Msa0155870:CDS 50.0%
GTTTACAGACTGGAGACCGA+AGG + chr1_4:21517296-21517315 Msa0155870:CDS 50.0%
CAGACGTAAATCTAGCACGG+TGG + chr1_4:21517339-21517358 Msa0155870:CDS 50.0%
! CGGGTAAGGCATCTTTGAAG+AGG + chr1_4:21517485-21517504 Msa0155870:CDS 50.0%
ACAGCAGCCACATCTGATGA+AGG - chr1_4:21517703-21517722 None:intergenic 50.0%
TCAGATGTGGCTGCTGTCAA+TGG + chr1_4:21517706-21517725 Msa0155870:CDS 50.0%
GGCAACAAGCTCAATTCAGC+TGG - chr1_4:21517901-21517920 None:intergenic 50.0%
ATGCAGGCCCAAAATGTAGG+CGG + chr1_4:21517976-21517995 Msa0155870:CDS 50.0%
AGACCGTTGGGCCAATAAGA+AGG + chr1_4:21518115-21518134 Msa0155870:CDS 50.0%
GACCGTTGGGCCAATAAGAA+GGG + chr1_4:21518116-21518135 Msa0155870:CDS 50.0%
ACCGTTGGGCCAATAAGAAG+GGG + chr1_4:21518117-21518136 Msa0155870:CDS 50.0%
ACCCCTTCTTATTGGCCCAA+CGG - chr1_4:21518121-21518140 None:intergenic 50.0%
! CGTGCTTCATCCAATGGACT+AGG - chr1_4:21518156-21518175 None:intergenic 50.0%
!! GGCATGGTTGACTTGATGGT+TGG - chr1_4:21518434-21518453 None:intergenic 50.0%
GAACCTAAGCAAGAGAAGGG+TGG + chr1_4:21518686-21518705 Msa0155870:CDS 50.0%
GAAATTGTCCTAGAGCTCCG+TGG - chr1_4:21518803-21518822 None:intergenic 50.0%
TTGTACTGCTGTCTGTGCAC+TGG + chr1_4:21519192-21519211 Msa0155870:CDS 50.0%
AGTGAAGCACGTATCCTCGA+AGG + chr1_4:21519270-21519289 Msa0155870:CDS 50.0%
ACCTTGAGAATATGGGGTGC+GGG - chr1_4:21519964-21519983 None:intergenic 50.0%
GTAATTTCCAAGCTCGTGGG+AGG - chr1_4:21520035-21520054 None:intergenic 50.0%
AGGTGAAGGACTCACCGAAA+GGG + chr1_4:21520144-21520163 Msa0155870:CDS 50.0%
AGGACTCACCGAAAGGGTTA+AGG + chr1_4:21520150-21520169 Msa0155870:CDS 50.0%
ACTCACCGAAAGGGTTAAGG+CGG + chr1_4:21520153-21520172 Msa0155870:CDS 50.0%
AACAGCCGCCTTAACCCTTT+CGG - chr1_4:21520161-21520180 None:intergenic 50.0%
CTCAGCTACTGGGCACAATA+TGG + chr1_4:21520205-21520224 Msa0155870:CDS 50.0%
!! ACGCTTTTGAGGAGTTGCGT+TGG - chr1_4:21520498-21520517 None:intergenic 50.0%
GCTTCGAAACGGCGATAACA+AGG - chr1_4:21520630-21520649 None:intergenic 50.0%
! TCTCGGCTGTTGCTTCGAAA+CGG - chr1_4:21520641-21520660 None:intergenic 50.0%
CCATTGGAGCTCAGGAAAAG+AGG - chr1_4:21520750-21520769 None:intergenic 50.0%
! CCTCTTTTCCTGAGCTCCAA+TGG + chr1_4:21520747-21520766 Msa0155870:three_prime_UTR 50.0%
TCAGCTAGACAAAGGGCCAT+TGG - chr1_4:21520766-21520785 None:intergenic 50.0%
AATGGGTGCAGAGGACAGAC+AGG - chr1_4:21512453-21512472 None:intergenic 55.0%
GCGATGTCACGTGGTTTACC+AGG + chr1_4:21513661-21513680 Msa0155870:CDS 55.0%
GGTCAATTAAACCGGGACGG+AGG - chr1_4:21514783-21514802 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr1_4:21514982-21515001 Msa0155870:intron 55.0%
AGCTTATACTCCCTCCGTCC+CGG - chr1_4:21514995-21515014 None:intergenic 55.0%
ACACAGCCGCCTGAAGCAAA+TGG + chr1_4:21515324-21515343 Msa0155870:CDS 55.0%
! GAACCGACTTACGTGTCTCC+AGG - chr1_4:21515762-21515781 None:intergenic 55.0%
! TTTGCACGTGCTGTTGCTGC+AGG + chr1_4:21515805-21515824 Msa0155870:CDS 55.0%
GGTGAGCTAAGGGAAACCGA+AGG - chr1_4:21516526-21516545 None:intergenic 55.0%
CACCAACCAAGCTACCTACG+TGG + chr1_4:21516542-21516561 Msa0155870:intron 55.0%
TCCCACGTAGGTAGCTTGGT+TGG - chr1_4:21516547-21516566 None:intergenic 55.0%
GGGAGAGAATGAACAGGCCA+AGG - chr1_4:21517028-21517047 None:intergenic 55.0%
TGGCCTGTTCATTCTCTCCC+AGG + chr1_4:21517028-21517047 Msa0155870:CDS 55.0%
GCACCTGGGAGAGAATGAAC+AGG - chr1_4:21517034-21517053 None:intergenic 55.0%
! GGAACACTGGCAAAGCACCT+GGG - chr1_4:21517048-21517067 None:intergenic 55.0%
! TGGAACACTGGCAAAGCACC+TGG - chr1_4:21517049-21517068 None:intergenic 55.0%
TGTAGTCGGGGATCCTCCAT+AGG - chr1_4:21517148-21517167 None:intergenic 55.0%
GACTCCGAGTTCCCGAATGA+AGG + chr1_4:21517850-21517869 Msa0155870:CDS 55.0%
CGTGCTCGTGCTTCATCCAA+TGG - chr1_4:21518162-21518181 None:intergenic 55.0%
ACTGCCAGTACTCAGTCTGC+TGG - chr1_4:21518618-21518637 None:intergenic 55.0%
GCACCACCCTTCTCTTGCTT+AGG - chr1_4:21518692-21518711 None:intergenic 55.0%
ATCTAGCAGTCACACTGCCG+AGG + chr1_4:21519932-21519951 Msa0155870:CDS 55.0%
TCCCGCACCCCATATTCTCA+AGG + chr1_4:21519960-21519979 Msa0155870:CDS 55.0%
! TAAAGCACCTCCCACGAGCT+TGG + chr1_4:21520025-21520044 Msa0155870:CDS 55.0%
TTCGGTGAGTCCTTCACCTG+AGG - chr1_4:21520143-21520162 None:intergenic 55.0%
CAGGTGAAGGACTCACCGAA+AGG + chr1_4:21520143-21520162 Msa0155870:CDS 55.0%
ACAAAGGGCCATTGGAGCTC+AGG - chr1_4:21520758-21520777 None:intergenic 55.0%
ACAAGCTACTCCCTCCGTCC+CGG + chr1_4:21514769-21514788 Msa0155870:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr1_4:21514981-21515000 Msa0155870:intron 60.0%
TCCTCCATAGGCGGACAACC+TGG - chr1_4:21517136-21517155 None:intergenic 60.0%
AGTCGGGGATCCTCCATAGG+CGG - chr1_4:21517145-21517164 None:intergenic 60.0%
TGGGGTGCGGGATGTTTCCT+CGG - chr1_4:21519952-21519971 None:intergenic 60.0%
GAGCACACGTGTCTGACACC+AGG + chr1_4:21520078-21520097 Msa0155870:CDS 60.0%
GCAGCCAGGTTGTCCGCCTA+TGG + chr1_4:21517129-21517148 Msa0155870:CDS 65.0%
GCCAGGTTGTCCGCCTATGG+AGG + chr1_4:21517132-21517151 Msa0155870:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 21512444 21520924 21512444 ID=Msa0155870;Name=Msa0155870
chr1_4 mRNA 21512444 21520924 21512444 ID=Msa0155870-mRNA-1;Parent=Msa0155870;Name=Msa0155870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=56|1|1|1|0.92|0.85|14|242|1190
chr1_4 exon 21512444 21512475 21512444 ID=Msa0155870-mRNA-1:exon:7763;Parent=Msa0155870-mRNA-1
chr1_4 exon 21512664 21512746 21512664 ID=Msa0155870-mRNA-1:exon:7764;Parent=Msa0155870-mRNA-1
chr1_4 exon 21513518 21513697 21513518 ID=Msa0155870-mRNA-1:exon:7765;Parent=Msa0155870-mRNA-1
chr1_4 exon 21514269 21514389 21514269 ID=Msa0155870-mRNA-1:exon:7766;Parent=Msa0155870-mRNA-1
chr1_4 exon 21514469 21514526 21514469 ID=Msa0155870-mRNA-1:exon:7767;Parent=Msa0155870-mRNA-1
chr1_4 exon 21515187 21515239 21515187 ID=Msa0155870-mRNA-1:exon:7768;Parent=Msa0155870-mRNA-1
chr1_4 exon 21515318 21515373 21515318 ID=Msa0155870-mRNA-1:exon:7769;Parent=Msa0155870-mRNA-1
chr1_4 exon 21515741 21515893 21515741 ID=Msa0155870-mRNA-1:exon:7770;Parent=Msa0155870-mRNA-1
chr1_4 exon 21516038 21516204 21516038 ID=Msa0155870-mRNA-1:exon:7771;Parent=Msa0155870-mRNA-1
chr1_4 exon 21516978 21518236 21516978 ID=Msa0155870-mRNA-1:exon:7772;Parent=Msa0155870-mRNA-1
chr1_4 exon 21518347 21519291 21518347 ID=Msa0155870-mRNA-1:exon:7773;Parent=Msa0155870-mRNA-1
chr1_4 exon 21519891 21520275 21519891 ID=Msa0155870-mRNA-1:exon:7774;Parent=Msa0155870-mRNA-1
chr1_4 exon 21520450 21520515 21520450 ID=Msa0155870-mRNA-1:exon:7775;Parent=Msa0155870-mRNA-1
chr1_4 exon 21520612 21520924 21520612 ID=Msa0155870-mRNA-1:exon:7776;Parent=Msa0155870-mRNA-1
chr1_4 five_prime_UTR 21512444 21512475 21512444 ID=Msa0155870-mRNA-1:five_prime_utr;Parent=Msa0155870-mRNA-1
chr1_4 five_prime_UTR 21512664 21512687 21512664 ID=Msa0155870-mRNA-1:five_prime_utr;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21512688 21512746 21512688 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21513518 21513697 21513518 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21514269 21514389 21514269 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21514469 21514526 21514469 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21515187 21515239 21515187 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21515318 21515373 21515318 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21515741 21515893 21515741 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21516038 21516204 21516038 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21516978 21518236 21516978 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21518347 21519291 21518347 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21519891 21520275 21519891 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21520450 21520515 21520450 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 CDS 21520612 21520682 21520612 ID=Msa0155870-mRNA-1:cds;Parent=Msa0155870-mRNA-1
chr1_4 three_prime_UTR 21520683 21520924 21520683 ID=Msa0155870-mRNA-1:three_prime_utr;Parent=Msa0155870-mRNA-1
Gene Sequence

>Msa0155870

ATGAACTCTTCAACAAGGTTGGATTCAGCTGTGTTTCAGCTCACACCAACTAGAACTAGGTTTGATTTGGTCATAACTGTGAATGGAAAGAAGGAGAAAATTGCCTCAGGTTTGCTCAGCCCATTTCTATGCCACTTGAAGGCTGCTCAAGATCAAATGGATAAGGGTGGTTATTCAATTGTTCTTGTGCCTGAGAATGGATGCGATGTCACGTGGTTTACCAGGGGAACTATCGAAAGGTTTGTTCGGTTCGTTAGCACACCTGAGATACTGGAACGTGTATATACTATAGAATCTGAAATCTTACAAATTGAAGAGGCAATTGCAATTCAAGGAAATAATTCCATAGGGATTGGCACTGTGGAAGAAAACCAAATAAAACAAGTGGAAAGCAATGAAGGGACTTTTGAAAGGACAGGAAGGAAGATTAAGGAGGATAGTAATGTGGAGAAAGCAGTTGTTCCTTACAAGTCTGATACACAGCCGCCTGAAGCAAATGGAAGCACCTTGTCACAAGGAAAATCAAAAGTCCAGCTTTTGAGAGTCCTGGAGACACGTAAGTCGGTTCTGCAGAAAGAGCAAGGAATGGCATTTGCACGTGCTGTTGCTGCAGGTTTCGACATCGACTCCATACCGGCTTTGATGTCATTTGCTGAATGCTTTGAAGCGTCACGCTTGATGGATGCGTGTAGAAAATTCATGTCTCTATGGAAAAGAAAGCATGAGAGTGGCCTATGGCTTGAAATCGAAGCTTCTGAAGTGACACCTAATCGTGCAGACTTCTCTACAATAAATACATCCCACACTGAAATGGACTCAGAAAGTAACGGTGGGAAAACAAATTCAGGAAACCAAGCTAATATTCAAGGTCAATTTTCTCATCATGGATTCTCCCCTTGGCCTGTTCATTCTCTCCCAGGTGCTTTGCCAGTGTTCCATCCTTATGCAGTCGAAGGCATACCCTACTATCCGACTTATCCAGGAAACAGTGCATTTATGCAGCCAGGTTGTCCGCCTATGGAGGATCCCCGACTACATGCTGATCAAAGTATTCGACACAGAAGACATTCCATGGATAATAGACACGGCAATACTGATTCCGAAAATTGGGACATTGAAACTTCAAAAACAAGTTTTAAGGATGAAATGGATATAGAGAGGGAAGGTTTACAGACTGGAGACCGAAGGAAGAAGACCAGTCGATCAGACAGACGTAAATCTAGCACGGTGGTCGTCCGAAATATCAATTACATAGCAAAGACTGAACATTCTTCTGGCAGTGAATCATATTCTGATTCTGCCACTGAAACCGAAGAAGTTCACAAATCTGTGAAGACCTCAAAAAGAAGAGGATCGGGTAAGGCATCTTTGAAGAGGTTGAATTCAACTGATAAGGAAGAAACAGACGGAGGACATTGGCAAGCATTCCAAAATTATTTATTGAAAGGTGTAGATGAAGATAGACATGCCATTAACCAAAACCAGTTTGAAATGGAAAAAGGTGATCACGTAAGAAGAAAAAAACATGTTGCAGCCAAAGATCCTTTAGATTTGACTGGTAAGTCACATCCTTCATCAGATGTGGCTGCTGTCAATGGACAATGTTATTCAAACACTGATTTGGAAAAGAAGTTGTTTCATAATGTGAATGATGACTCAATCATGGTTGAACACAGAGTCAATGATCCAGTAAATATTGAGGGAAATGCTATTGACATGGACTCCGAGTTCCCGAATGAAGGAAAACGGAAAATCTCCAATTATCAACCAGCTGAATTGAGCTTGTTGCCTGAAAGAGGAGCTGATAAAGGGTCAATGCGTTATGACTGTGCACTAGACTACAAAATGCAGGCCCAAAATGTAGGCGGTTCTTCACAGGATAAAAAGAACAAAGGGGCATTGGCTCATCACACCAAACCAAGATCTAAGATGTTGGATAAGGAGCAGAAATCAAAACCTACACCAAGTAGTTCTGATAGAAAAAAGACCGTTGGGCCAATAAGAAGGGGTAAACCGAATAAACCTAGTCCATTGGATGAAGCACGAGCACGTGCTGAAAGACTGCGTAACTACAAAGCAGATCTCCAAAAACTGAAGAAAGAGAAGGAAGAGGAAGATATAAAACGTATAGAGGCTTTAAAGAAGGAGAGACAAAAGAGAATCGCTGCTAGGAGTAGCTCAGTCACCAAACCAACCATCAAGTCAACCATGCCATCACTGCAAACAAAGAAACAGTTTCAAACAAAATTTTTGTCAACCGTGCATAAAGGATCAAAGTTTAGTGATTCAGAGCCAAGATCATCCTTACCCTTCCAAAGATTCCCTATCAGAACTGTTTCTGGTGGATCCAATGATTCTTTAAAACCCTCAAAAACCAGCAGACTGAGTACTGGCAGTAGCCACTCAGTTTCAAGCAAATTAAGGCGATCAGTGCCTCTTCTGCATGAACCTAAGCAAGAGAAGGGTGGTGCTGCAAACAATCCTAAGGCATCAATAACAATCAGTAGAAGATTCTCAGAACCTAAAATGAGTACCATTCGTCCGACTTCCTTAGTTAAACCACGGAGCTCTAGGACAATTTCAAGGACAAAAGCAGTTGATGAGACCGAGAGAAGAAAGATTTCTGCTATTGTGAATTATGATAAAGACAAGATTGCAACCCTTCCAGAACTGAAAATCAGAATATCTAAAGAGAAGACACAAAAGCTTAATGATGACAAGCCTTCTATGAATTCAGAAGGTGCCTTGCTGAAGAAAAGTGAAATTGAAATTTCAACCACTGATGATAGAGATGAAATTCCTATGATTGATAAGACTGTTGTGATGCTTGAGGGTGAAAAAAAACCCTGTGCCCTTGATATCAACGATGAGAAACCAAGAGGGAAAACAACGATAGCAAAGAGACAAGATGACAAAGATAAAGAAATGGAGAAAACTGAGAAAGTATCAAGTTGTACTGCTGTCTGTGCACTGGCTTCATCCTTAAGAACAAATATGGTACCCATAGGAACCTTGGAGAACCAATCACAAGTGAAGCACGTATCCTCGAAGGTTAAAATGAATAATACAAAGAATGAACCTTCAAAATCATCATCTAGCAGTCACACTGCCGAGGAAACATCCCGCACCCCATATTCTCAAGGTTCTACTTTGGAAGATGGCCGTGCACGAAATTCTGAGTATGGTAAAGCACCTCCCACGAGCTTGGAAATTACATCAATCGGTATGGAGACTTTCAGAGCACACGTGTCTGACACCAGGAACTCTACACTTGAGAAAATTCCTGAGGTAAATGAGAATCCTCAGGTGAAGGACTCACCGAAAGGGTTAAGGCGGCTGTTAAAGTTTGGAAAAAAGAATCACAACTCAGCTACTGGGCACAATATGGAATCAGATCATGCCAATGAAATTGGAGTGAATGGTTCCACCAATGAAGCTCCCACTTTGAGGAATTTACTTTCTCGAGATGAAACTCTCTCAACCAACGCAACTCCTCAAAAGCCTACTCGCTCTTTCTCCTTGTTATCGCCGTTTCGAAGCAACAGCCGAGAAAAAAAGATAATGACAACTTGA
Protein sequence

>Msa0155870

MNSSTRLDSAVFQLTPTRTRFDLVITVNGKKEKIASGLLSPFLCHLKAAQDQMDKGGYSIVLVPENGCDVTWFTRGTIERFVRFVSTPEILERVYTIESEILQIEEAIAIQGNNSIGIGTVEENQIKQVESNEGTFERTGRKIKEDSNVEKAVVPYKSDTQPPEANGSTLSQGKSKVQLLRVLETRKSVLQKEQGMAFARAVAAGFDIDSIPALMSFAECFEASRLMDACRKFMSLWKRKHESGLWLEIEASEVTPNRADFSTINTSHTEMDSESNGGKTNSGNQANIQGQFSHHGFSPWPVHSLPGALPVFHPYAVEGIPYYPTYPGNSAFMQPGCPPMEDPRLHADQSIRHRRHSMDNRHGNTDSENWDIETSKTSFKDEMDIEREGLQTGDRRKKTSRSDRRKSSTVVVRNINYIAKTEHSSGSESYSDSATETEEVHKSVKTSKRRGSGKASLKRLNSTDKEETDGGHWQAFQNYLLKGVDEDRHAINQNQFEMEKGDHVRRKKHVAAKDPLDLTGKSHPSSDVAAVNGQCYSNTDLEKKLFHNVNDDSIMVEHRVNDPVNIEGNAIDMDSEFPNEGKRKISNYQPAELSLLPERGADKGSMRYDCALDYKMQAQNVGGSSQDKKNKGALAHHTKPRSKMLDKEQKSKPTPSSSDRKKTVGPIRRGKPNKPSPLDEARARAERLRNYKADLQKLKKEKEEEDIKRIEALKKERQKRIAARSSSVTKPTIKSTMPSLQTKKQFQTKFLSTVHKGSKFSDSEPRSSLPFQRFPIRTVSGGSNDSLKPSKTSRLSTGSSHSVSSKLRRSVPLLHEPKQEKGGAANNPKASITISRRFSEPKMSTIRPTSLVKPRSSRTISRTKAVDETERRKISAIVNYDKDKIATLPELKIRISKEKTQKLNDDKPSMNSEGALLKKSEIEISTTDDRDEIPMIDKTVVMLEGEKKPCALDINDEKPRGKTTIAKRQDDKDKEMEKTEKVSSCTAVCALASSLRTNMVPIGTLENQSQVKHVSSKVKMNNTKNEPSKSSSSSHTAEETSRTPYSQGSTLEDGRARNSEYGKAPPTSLEITSIGMETFRAHVSDTRNSTLEKIPEVNENPQVKDSPKGLRRLLKFGKKNHNSATGHNMESDHANEIGVNGSTNEAPTLRNLLSRDETLSTNATPQKPTRSFSLLSPFRSNSREKKIMTT*