AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1103580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103580 MtrunA17_Chr7g0234061 93.980 598 12 2 1 574 1 598 0.0 1138
Msa1103580 MtrunA17_Chr4g0056511 63.077 585 187 5 1 560 1 581 0.0 725
Msa1103580 MtrunA17_Chr3g0079321 60.503 557 195 4 4 535 6 562 0.0 682
Msa1103580 MtrunA17_Chr3g0143671 48.270 549 232 11 11 528 10 537 4.82e-168 488
Msa1103580 MtrunA17_Chr4g0024861 47.529 526 234 8 24 525 24 531 4.80e-163 475
Msa1103580 MtrunA17_Chr8g0374271 48.120 532 227 9 24 528 28 537 1.07e-161 472
Msa1103580 MtrunA17_Chr1g0157341 48.393 529 225 10 24 525 26 533 1.62e-160 469
Msa1103580 MtrunA17_Chr4g0038671 46.182 537 246 9 13 525 16 533 1.62e-159 466
Msa1103580 MtrunA17_Chr5g0402831 48.762 525 225 9 24 525 28 531 4.56e-158 462
Msa1103580 MtrunA17_Chr4g0043251 45.455 561 256 12 9 536 6 549 8.21e-155 455
Msa1103580 MtrunA17_Chr2g0322441 47.628 527 232 9 24 525 27 534 7.58e-154 452
Msa1103580 MtrunA17_Chr4g0075071 45.537 549 257 9 4 528 8 538 8.06e-151 444
Msa1103580 MtrunA17_Chr8g0374261 44.203 552 259 10 8 532 10 539 9.49e-151 444
Msa1103580 MtrunA17_Chr4g0043261 44.928 552 254 12 11 532 8 539 4.41e-148 437
Msa1103580 MtrunA17_Chr3g0121151 43.716 549 266 10 12 532 51 584 8.63e-146 433
Msa1103580 MtrunA17_Chr3g0121161 43.376 551 265 9 12 532 51 584 2.96e-144 429
Msa1103580 MtrunA17_Chr3g0121171 42.414 580 283 12 12 563 1161 1717 3.99e-135 434
Msa1103580 MtrunA17_Chr3g0121171 42.096 582 282 11 12 563 586 1142 1.24e-134 433
Msa1103580 MtrunA17_Chr3g0121171 42.609 575 275 11 19 563 18 567 3.75e-133 429
Msa1103580 MtrunA17_Chr3g0121171 42.259 549 265 11 12 532 1736 2260 5.29e-127 411
Msa1103580 MtrunA17_Chr4g0024641 45.987 461 206 9 89 525 13 454 5.70e-124 387
Msa1103580 MtrunA17_Chr1g0197301 45.482 332 150 8 220 525 4 330 5.53e-83 262
Msa1103580 MtrunA17_Chr1g0197311 42.387 243 100 5 11 221 9 243 1.21e-49 172
Msa1103580 MtrunA17_Chr5g0404341 27.397 511 307 17 29 490 36 531 5.32e-48 176
Msa1103580 MtrunA17_Chr3g0118321 27.080 565 317 21 28 525 27 563 1.65e-46 172
Msa1103580 MtrunA17_Chr5g0404361 27.843 510 305 15 29 490 82 576 7.99e-46 171
Msa1103580 MtrunA17_Chr8g0382691 28.288 555 320 17 28 525 35 568 2.98e-44 166
Msa1103580 MtrunA17_Chr3g0118331 26.678 566 328 20 28 530 26 567 6.64e-43 162
Msa1103580 MtrunA17_Chr4g0005921 24.682 551 322 16 4 490 1 522 3.17e-40 154
Msa1103580 MtrunA17_Chr5g0429511 26.306 555 346 18 12 518 11 550 5.98e-40 153
Msa1103580 MtrunA17_Chr8g0346581 26.654 544 304 20 23 498 30 546 7.55e-40 153
Msa1103580 MtrunA17_Chr7g0238941 25.405 555 307 20 8 490 24 543 7.94e-38 147
Msa1103580 MtrunA17_Chr3g0104061 25.046 539 339 16 28 518 27 548 9.83e-38 147
Msa1103580 MtrunA17_Chr5g0436461 25.094 534 330 17 10 490 3 519 3.68e-36 142
Msa1103580 MtrunA17_Chr5g0431581 27.342 523 315 21 28 498 26 535 3.75e-35 139
Msa1103580 MtrunA17_Chr7g0237441 24.820 556 346 21 3 497 10 554 9.46e-35 138
Msa1103580 MtrunA17_Chr7g0238351 26.642 533 317 22 28 497 34 555 2.57e-34 137
Msa1103580 MtrunA17_Chr4g0075781 37.220 223 80 5 133 353 3 167 1.03e-33 126
Msa1103580 MtrunA17_Chr3g0114211 27.135 527 318 20 12 495 14 517 1.63e-33 134
Msa1103580 MtrunA17_Chr5g0437681 26.733 505 316 16 29 495 26 514 3.63e-33 134
Msa1103580 MtrunA17_Chr7g0237491 25.532 564 335 24 4 497 6 554 3.72e-33 134
Msa1103580 MtrunA17_Chr4g0031901 24.908 542 314 18 17 490 34 550 6.71e-33 133
Msa1103580 MtrunA17_Chr7g0240991 26.895 554 327 20 6 497 8 545 3.98e-32 130
Msa1103580 MtrunA17_Chr7g0240971 25.310 565 339 19 8 507 6 552 7.12e-30 124
Msa1103580 MtrunA17_Chr4g0008521 24.952 521 315 18 27 485 26 532 1.09e-27 117
Msa1103580 MtrunA17_Chr7g0238981 23.562 539 338 17 28 504 48 574 1.85e-26 114
Msa1103580 MtrunA17_Chr2g0278811 23.333 540 331 16 28 490 39 572 9.92e-25 108
Msa1103580 MtrunA17_Chr3g0118341 37.162 148 88 5 29 173 28 173 8.39e-23 97.1
Msa1103580 MtrunA17_Chr4g0024651 46.154 78 42 0 24 101 24 101 1.26e-15 72.8
Msa1103580 MtrunA17_Chr3g0133871 26.471 170 122 3 28 195 33 201 3.00e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103580 AT5G48450.1 69.595 592 141 8 11 574 11 591 0.0 816
Msa1103580 AT5G48450.2 70.719 584 133 8 11 566 11 584 0.0 814
Msa1103580 AT4G12420.1 64.568 556 169 5 8 535 3 558 0.0 732
Msa1103580 AT4G12420.2 64.568 556 169 5 8 535 3 558 0.0 732
Msa1103580 AT5G51480.1 57.886 577 212 7 20 570 21 592 0.0 702
Msa1103580 AT4G25240.2 60.457 569 197 6 1 542 1 568 0.0 694
Msa1103580 AT4G25240.1 60.457 569 197 6 1 542 1 568 0.0 694
Msa1103580 AT1G21860.1 46.607 560 243 12 3 532 5 538 2.75e-166 484
Msa1103580 AT1G21850.1 45.856 543 242 11 12 525 12 531 3.88e-159 466
Msa1103580 AT1G55570.1 44.022 552 264 10 8 528 7 544 3.53e-156 459
Msa1103580 AT4G22010.1 46.961 543 237 10 12 525 11 531 4.02e-156 458
Msa1103580 AT1G41830.1 46.225 543 241 12 12 525 12 532 2.86e-155 456
Msa1103580 AT1G76160.1 45.027 553 253 11 3 528 6 534 4.13e-155 456
Msa1103580 AT5G66920.1 46.286 525 238 8 25 525 35 539 2.79e-154 454
Msa1103580 AT4G38420.1 44.909 550 259 8 7 528 10 543 5.17e-154 453
Msa1103580 AT3G13390.1 45.709 536 243 10 24 528 25 543 3.75e-153 451
Msa1103580 AT1G55560.1 44.485 553 257 11 11 530 7 542 4.93e-153 451
Msa1103580 AT3G13400.2 44.304 553 258 11 11 530 8 543 1.65e-151 447
Msa1103580 AT3G13400.1 44.304 553 258 11 11 530 8 543 1.65e-151 447
Msa1103580 AT4G37160.1 46.490 527 238 10 24 525 28 535 6.37e-148 437
Msa1103580 AT4G28090.1 43.920 551 252 12 12 529 13 539 3.79e-144 427
Msa1103580 AT1G75790.1 43.557 551 250 12 14 525 14 542 4.71e-144 427
Msa1103580 AT2G23630.2 45.817 526 242 9 24 525 32 538 7.63e-140 417
Msa1103580 AT2G23630.1 45.817 526 242 9 24 525 27 533 1.07e-139 416
Msa1103580 AT4G38420.3 46.170 470 232 6 7 471 10 463 3.47e-137 408
Msa1103580 AT4G38420.2 46.421 461 226 6 7 462 10 454 1.06e-135 403
Msa1103580 AT4G37160.2 48.299 441 207 8 24 462 28 449 1.01e-131 392
Msa1103580 AT4G39830.1 27.474 586 335 20 9 525 14 578 6.61e-52 187
Msa1103580 AT5G21105.1 28.366 557 321 18 29 526 40 577 3.40e-50 182
Msa1103580 AT5G21105.3 28.599 514 293 17 29 483 40 538 2.52e-45 168
Msa1103580 AT5G21100.1 25.887 564 321 17 31 526 28 562 3.36e-42 160
Msa1103580 AT2G30210.1 26.204 519 313 16 29 490 30 535 3.24e-38 149
Msa1103580 AT5G03260.1 27.344 512 305 18 29 490 28 522 6.60e-38 147
Msa1103580 AT4G39830.2 27.163 497 277 18 93 525 8 483 1.26e-37 145
Msa1103580 AT4G39830.3 27.163 497 277 18 93 525 6 481 1.33e-37 145
Msa1103580 AT2G46570.1 25.919 544 334 17 1 490 6 534 2.68e-37 146
Msa1103580 AT5G58910.2 25.819 519 312 17 28 490 31 532 7.74e-37 144
Msa1103580 AT1G18140.1 24.214 541 324 17 29 498 31 556 1.15e-36 144
Msa1103580 AT5G58910.3 25.832 511 306 17 36 490 38 531 1.66e-35 140
Msa1103580 AT5G48100.1 25.813 523 311 17 28 490 23 528 5.49e-35 139
Msa1103580 AT4G39830.4 26.358 497 268 18 93 525 8 470 4.13e-33 132
Msa1103580 AT5G58910.1 25.832 511 299 18 36 490 2 488 9.44e-33 132
Msa1103580 AT2G38080.1 23.062 516 324 15 28 490 28 523 5.54e-32 130
Msa1103580 AT5G05390.1 24.470 519 361 12 1 495 1 512 3.18e-31 128
Msa1103580 AT5G09360.1 25.610 492 307 13 46 490 55 534 3.56e-31 128
Msa1103580 AT5G01190.1 24.314 510 325 17 29 490 27 523 3.98e-31 128
Msa1103580 AT5G60020.1 25.651 538 320 20 28 497 26 551 4.72e-31 128
Msa1103580 AT2G29130.1 23.446 563 330 16 4 490 1 538 8.15e-31 127
Msa1103580 AT5G60020.3 26.104 521 305 20 45 497 11 519 1.40e-30 126
Msa1103580 AT5G01050.1 25.694 576 345 20 3 518 7 559 3.19e-30 125
Msa1103580 AT5G01190.2 24.644 491 311 16 47 490 31 509 5.35e-30 124
Msa1103580 AT5G01040.1 24.226 549 329 16 1 485 1 526 5.44e-30 124
Msa1103580 AT5G60020.2 25.524 525 313 19 28 486 26 538 2.03e-29 122
Msa1103580 AT2G40370.1 25.430 523 310 16 28 495 30 527 3.47e-29 122
Msa1103580 AT3G09220.1 23.507 536 332 15 12 485 8 527 5.71e-29 121
Msa1103580 AT2G46570.2 26.293 464 273 17 81 490 1 449 2.50e-27 115
Msa1103580 AT5G07130.1 24.071 565 361 17 1 509 1 553 4.78e-27 115
Msa1103580 AT5G21105.2 27.887 355 198 11 213 526 49 386 9.03e-27 113
Msa1103580 AT3G09220.2 22.902 441 272 13 100 485 3 430 1.22e-17 86.3
Msa1103580 AT5G07130.2 23.739 476 298 15 90 509 2 468 1.27e-16 83.2
Msa1103580 AT5G07130.3 23.739 476 298 15 90 509 2 468 1.27e-16 83.2

Find 178 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCGTGTGTTACTCTATTT+TGG 0.145199 7_3:+39563819 None:intergenic
GTATTTCTATTTCAGGTAAT+TGG 0.146979 7_3:-39560958 Msa1103580:intron
CTGAATTGTAGCATGGATTT+TGG 0.148435 7_3:-39557512 Msa1103580:intron
TCTCAACAAGCTTGAATTTC+AGG 0.151787 7_3:-39558543 Msa1103580:CDS
CTGTCTCTTTAGGTCTTTCC+TGG 0.186287 7_3:-39556539 Msa1103580:intron
CCGCAAGGTTCCTTCAAATA+TGG 0.204674 7_3:-39557936 Msa1103580:CDS
CAGGTTCCACATTTATTATT+TGG 0.217288 7_3:+39560276 None:intergenic
GTTGATGTCTCTCTCATTAA+TGG 0.231586 7_3:-39557720 Msa1103580:CDS
CAACTTGAAGATAAGATTCT+TGG 0.239119 7_3:+39556432 None:intergenic
GGCCTGTTCATCCATCTATT+TGG 0.241957 7_3:+39557750 None:intergenic
CGATGCCATCACTGTCTTCT+TGG 0.243580 7_3:-39563801 Msa1103580:CDS
CTAAACTTCCAGAGAGCTTC+TGG 0.250978 7_3:-39560613 Msa1103580:CDS
TGCTCATCTAAATATTAAAA+TGG 0.268109 7_3:+39555520 None:intergenic
ATTCTAGCTTGAGAAGTATT+AGG 0.289303 7_3:-39555347 Msa1103580:three_prime_UTR
ATTTGGTAAGTTATGCCATT+TGG 0.292435 7_3:+39560293 None:intergenic
TTGAAGGAACCTTGCGGGTT+TGG 0.295134 7_3:+39557942 None:intergenic
TTTAGGTCTTTCCTGGGGCT+TGG 0.295657 7_3:-39556532 Msa1103580:intron
ATTCTAGAATTACTGCTTAG+AGG 0.297284 7_3:+39555661 None:intergenic
ACCTGGCAAGACGGAGTTTC+AGG 0.310758 7_3:-39560724 Msa1103580:CDS
CCACAGTATATTGCATTATC+AGG 0.312549 7_3:+39556374 None:intergenic
CAGAGAGCTTCTGGAGGATA+TGG 0.316696 7_3:-39560604 Msa1103580:CDS
AAGTGGCGAACTACCCTTAA+TGG 0.317844 7_3:-39557852 Msa1103580:CDS
GTAAATACGATATACCATTA+AGG 0.323807 7_3:+39557838 None:intergenic
CAATTCCAGCCGGCTGGAAT+TGG 0.326836 7_3:-39560690 Msa1103580:CDS
CAATTCCAGCCGGCTGGAAT+TGG 0.326836 7_3:+39560691 None:intergenic
AATTCTCAGGGTCCTGCTTC+AGG 0.329832 7_3:-39558307 Msa1103580:CDS
CCCGATGGTGTTCTTATCAA+TGG 0.348871 7_3:-39560350 Msa1103580:CDS
TTTGGTAAGTTATGCCATTT+GGG 0.355633 7_3:+39560294 None:intergenic
GATGAGCATTGCCATTGAAT+AGG 0.359016 7_3:-39555505 Msa1103580:three_prime_UTR
CACTTTCCGTTTATAAGCTC+TGG 0.359937 7_3:+39557870 None:intergenic
CTCAGGAAGGATGTGGAAAA+TGG 0.363410 7_3:-39560389 Msa1103580:CDS
GGGATGGGAGAGAGGAGAGG+AGG 0.369542 7_3:+39564003 None:intergenic
GATATGCATTCTTTGTTGTT+GGG 0.369756 7_3:-39557626 Msa1103580:intron
GGGATCAATAAGCAGTTTCC+TGG 0.372282 7_3:-39560937 Msa1103580:CDS
TGGTCAGTCATATTCATTCT+TGG 0.373750 7_3:-39558437 Msa1103580:CDS
TTTGCACTACGCTAATTCTC+AGG 0.376438 7_3:-39558320 Msa1103580:CDS
GGATATGCATTCTTTGTTGT+TGG 0.378228 7_3:-39557627 Msa1103580:CDS
CTCTTGACAATGCTGGCATT+TGG 0.381859 7_3:-39556493 Msa1103580:CDS
CGCAACATTATAAAATTCTC+GGG 0.382792 7_3:-39557791 Msa1103580:CDS
GCAGTTATTCCTGTTCCGTT+TGG 0.384313 7_3:-39560559 Msa1103580:CDS
AAAACTGGTATTTGTGAGAT+TGG 0.385361 7_3:+39555695 None:intergenic
TATTTCTATTTCAGGTAATT+GGG 0.387942 7_3:-39560957 Msa1103580:intron
TTTCAAGTTAAAGATCAGAT+AGG 0.391734 7_3:-39560658 Msa1103580:CDS
TTCCAAATAGATGGATGAAC+AGG 0.391905 7_3:-39557752 Msa1103580:CDS
CATATTTGAAGGAACCTTGC+GGG 0.394706 7_3:+39557937 None:intergenic
CGCAAGGTTCCTTCAAATAT+GGG 0.395338 7_3:-39557935 Msa1103580:CDS
TTTGTTGTGACATTTAAAAT+TGG 0.403985 7_3:+39560913 None:intergenic
GCGCAACATTATAAAATTCT+CGG 0.405379 7_3:-39557792 Msa1103580:CDS
CTCGGTTTGTTAATTCATCA+TGG 0.407907 7_3:-39558366 Msa1103580:CDS
CACTGTCCAGTCCTACCATT+TGG 0.410601 7_3:-39557652 Msa1103580:CDS
GGATGGGAGAGAGGAGAGGA+GGG 0.414596 7_3:+39564004 None:intergenic
GTGGAAAATGGCGTTGATCT+TGG 0.416391 7_3:-39560377 Msa1103580:CDS
AAGCAAAATTTCCTATTCAA+TGG 0.417447 7_3:+39555494 None:intergenic
TGTCTCTTTAGGTCTTTCCT+GGG 0.417536 7_3:-39556538 Msa1103580:intron
GTCCAGTCGTAGTAAACAAA+AGG 0.420096 7_3:+39563727 None:intergenic
AGAATTAGCGTAGTGCAAAA+TGG 0.421537 7_3:+39558324 None:intergenic
GTGTTACCAATGCAGAAGTA+AGG 0.423358 7_3:+39560849 None:intergenic
AGAGAGACATCAACTTTAGA+AGG 0.425069 7_3:+39557729 None:intergenic
CATATCCTCCAGAAGCTCTC+TGG 0.426816 7_3:+39560605 None:intergenic
AGGTCATTCTTTGTAATATG+AGG 0.426823 7_3:-39555547 Msa1103580:three_prime_UTR
CTGGACTGTGTATGATCCTT+CGG 0.430254 7_3:+39558489 None:intergenic
GAGGTGATCCTACAGAAAAC+TGG 0.432618 7_3:+39555680 None:intergenic
GCTCTAACTGAAAGTTTGTA+TGG 0.435361 7_3:-39555613 Msa1103580:CDS
AACCTCAACTCCTGGTATCT+AGG 0.437891 7_3:-39556455 Msa1103580:CDS
ATTGTCAAGAGATACTAAAA+TGG 0.438940 7_3:+39556505 None:intergenic
GGTGTTCTTATCAATGGATT+CGG 0.439630 7_3:-39560344 Msa1103580:CDS
TCCTGAAACTCCGTCTTGCC+AGG 0.441958 7_3:+39560723 None:intergenic
CGGCAAGACCTTGTGACTCT+TGG 0.447025 7_3:+39560492 None:intergenic
GCCGGCTGGAATTGGACAAT+TGG 0.449552 7_3:+39560699 None:intergenic
TTATATTATTTCTCAGTGAC+TGG 0.454591 7_3:-39560519 Msa1103580:CDS
GTGACATTTAAAATTGGTCC+AGG 0.462309 7_3:+39560919 None:intergenic
TTAGTATCTCTTGACAATGC+TGG 0.464781 7_3:-39556500 Msa1103580:CDS
ATGAACCCTTACTTCTGCAT+TGG 0.466031 7_3:-39560855 Msa1103580:intron
TCTGGCAATCCAAACGGAAC+AGG 0.467476 7_3:+39560550 None:intergenic
ACCTTTGAAGGGAGGAAAGT+AGG 0.468281 7_3:+39556351 None:intergenic
TAAATACGATATACCATTAA+GGG 0.469026 7_3:+39557839 None:intergenic
AGAAGCAGCATAGAAGTGTT+GGG 0.469563 7_3:+39563773 None:intergenic
TCATCATGGACTAGAGCTAC+TGG 0.469718 7_3:-39558352 Msa1103580:CDS
ATACCAGGAGTTGAGGTTCT+CGG 0.471199 7_3:+39556460 None:intergenic
AAGAAGCAGCATAGAAGTGT+TGG 0.472855 7_3:+39563772 None:intergenic
ATCCATCCAAATGGTAGGAC+TGG 0.480355 7_3:+39557646 None:intergenic
AATGAAATAATTTAGAAAGA+TGG 0.485291 7_3:+39563907 None:intergenic
CGGGTTTGGACGTGCAGCAC+CGG 0.485660 7_3:+39557956 None:intergenic
AGACCTCCAGAGCTTATAAA+CGG 0.490187 7_3:-39557876 Msa1103580:CDS
ATGTATGAGAACTGTGAACT+AGG 0.490280 7_3:-39555413 Msa1103580:three_prime_UTR
CCCACTTGGAGTCAAACAAC+AGG 0.491695 7_3:-39563683 Msa1103580:intron
TATGTCCAATTCCAGCCGGC+TGG 0.494748 7_3:+39560685 None:intergenic
GCTTGATTTATAGAGAAAGA+AGG 0.497123 7_3:+39558253 None:intergenic
ATATTGTGAAACAGGATCTC+AGG 0.497669 7_3:-39560406 Msa1103580:intron
AATAATATAACATCACCATC+TGG 0.498003 7_3:+39560532 None:intergenic
ATTGTCCAATTCCAGCCGGC+TGG 0.498333 7_3:-39560696 Msa1103580:CDS
ACTACATTGTTGCCAGTCCT+CGG 0.498976 7_3:-39558384 Msa1103580:CDS
AGTAATGTCCCCATATTTGA+AGG 0.510105 7_3:+39557926 None:intergenic
TTCAAGTTAAAGATCAGATA+GGG 0.510141 7_3:-39560657 Msa1103580:CDS
AAATCACAACTTACTTCTAG+TGG 0.511161 7_3:-39558515 Msa1103580:CDS
GCCTACTTTCCTCCCTTCAA+AGG 0.512657 7_3:-39556352 Msa1103580:intron
CAGGGAAAACATATCGCATA+CGG 0.515730 7_3:-39558582 Msa1103580:CDS
TGAATTAACAAACCGAGGAC+TGG 0.523363 7_3:+39558372 None:intergenic
ACAAACTTTCAGTTAGAGCT+AGG 0.523542 7_3:+39555617 None:intergenic
GCAAGCGTCAAAGGTGTTGA+AGG 0.524650 7_3:+39557813 None:intergenic
GTCATCAGATCACATGGGGA+TGG 0.532008 7_3:+39563987 None:intergenic
AGTGTGTCATCGTAGCGATA+AGG 0.537764 7_3:+39560320 None:intergenic
AAGGATTATCTTGATCAGAA+AGG 0.538276 7_3:+39558272 None:intergenic
AGAATGCATATCCATCCAAA+TGG 0.541106 7_3:+39557637 None:intergenic
TAAATCAAGCAAGATCAGTA+AGG 0.541371 7_3:-39558240 Msa1103580:intron
TAATGTTGCGCAAGCGTCAA+AGG 0.542306 7_3:+39557804 None:intergenic
TCATCAGATCACATGGGGAT+GGG 0.542839 7_3:+39563988 None:intergenic
GACTCCAAGTGGGGATGCTG+TGG 0.543495 7_3:+39563693 None:intergenic
GATGACACACTTGTCCCAAA+TGG 0.543811 7_3:-39560308 Msa1103580:CDS
CTAGGAAGAGGACCTGAAGC+AGG 0.544422 7_3:+39558295 None:intergenic
TCCATTGATAAGAACACCAT+CGG 0.545099 7_3:+39560349 None:intergenic
GTGCCGAGAACCTCAACTCC+TGG 0.548498 7_3:-39556463 Msa1103580:CDS
TCACCATCTGGCAATCCAAA+CGG 0.548952 7_3:+39560544 None:intergenic
ACAGGATCTCAGGAAGGATG+TGG 0.550891 7_3:-39560396 Msa1103580:intron
AGATTCTTGGCCTAGATACC+AGG 0.550935 7_3:+39556445 None:intergenic
ATATTCATTCTTGGTTACGA+TGG 0.554331 7_3:-39558428 Msa1103580:CDS
GGCCTAGATACCAGGAGTTG+AGG 0.554344 7_3:+39556453 None:intergenic
AGAAGAAGAAGAAGGTGTTG+AGG 0.556779 7_3:+39563882 None:intergenic
ACCTGTTGTTTGACTCCAAG+TGG 0.559978 7_3:+39563682 None:intergenic
GTAGAGAGAGAAGAAGAAGA+AGG 0.561551 7_3:+39563874 None:intergenic
GCAGGAATGGTGTACAACAT+AGG 0.561728 7_3:-39560753 Msa1103580:intron
GTCCAGTCCTACCATTTGGA+TGG 0.562113 7_3:-39557648 Msa1103580:CDS
TACACCACAGCATCCCCACT+TGG 0.564398 7_3:-39563697 Msa1103580:CDS
CTCATTAATGGCACTTACAG+AGG 0.565264 7_3:-39557708 Msa1103580:CDS
AAAATGGCTGTCCAAGCCCC+AGG 0.567280 7_3:+39556521 None:intergenic
TGTTACCAATGCAGAAGTAA+GGG 0.569094 7_3:+39560850 None:intergenic
GTGAGTGTCATCAGATCACA+TGG 0.569150 7_3:+39563981 None:intergenic
CGCATACGGGTTCACAATGT+CGG 0.569442 7_3:-39558568 Msa1103580:CDS
CAGAGCTTATAAACGGAAAG+TGG 0.569942 7_3:-39557869 Msa1103580:CDS
CCATTGATAAGAACACCATC+GGG 0.570571 7_3:+39560350 None:intergenic
ATCACATGGGGATGGGAGAG+AGG 0.570748 7_3:+39563995 None:intergenic
CTCGTATGTCCAATTCCAGC+CGG 0.572292 7_3:+39560681 None:intergenic
TTGCACTACGCTAATTCTCA+GGG 0.573914 7_3:-39558319 Msa1103580:CDS
ACCAATTGTCCAATTCCAGC+CGG 0.577858 7_3:-39560700 Msa1103580:CDS
CAAATAATAAATGTGGAACC+TGG 0.578834 7_3:-39560275 Msa1103580:intron
TCCAGTCGTAGTAAACAAAA+GGG 0.579413 7_3:+39563728 None:intergenic
AACTTACCAAATAATAAATG+TGG 0.579691 7_3:-39560282 Msa1103580:CDS
GTCTCTTTAGGTCTTTCCTG+GGG 0.581453 7_3:-39556537 Msa1103580:intron
TGATCAGAAAGGCTAGGAAG+AGG 0.584268 7_3:+39558283 None:intergenic
AGAGAGACAGAGCTGTGTTG+AGG 0.585603 7_3:+39563933 None:intergenic
GTTCCGTTTGGATTGCCAGA+TGG 0.588154 7_3:-39560547 Msa1103580:CDS
GACAGAGCTGTGTTGAGGAC+TGG 0.590990 7_3:+39563938 None:intergenic
CCAGCAAAACTACACGAACA+TGG 0.592174 7_3:-39558470 Msa1103580:CDS
TTTCCGTTTATAAGCTCTGG+AGG 0.593886 7_3:+39557873 None:intergenic
CTCTCTGGAAGTTTAGCGAA+GGG 0.598645 7_3:+39560620 None:intergenic
CTAGCTTGAGAAGTATTAGG+TGG 0.600399 7_3:-39555344 None:intergenic
ATGGGGATGGGAGAGAGGAG+AGG 0.601685 7_3:+39564000 None:intergenic
TTATCTTGATCAGAAAGGCT+AGG 0.602716 7_3:+39558277 None:intergenic
TGCATATCCATCCAAATGGT+AGG 0.603792 7_3:+39557641 None:intergenic
AGGGAAAACATATCGCATAC+GGG 0.607468 7_3:-39558581 Msa1103580:CDS
AGAGCTTCTGGAGGATATGG+AGG 0.615958 7_3:-39560601 Msa1103580:CDS
ACGAACATGGATATTCATGT+TGG 0.617151 7_3:-39558457 Msa1103580:CDS
GTAAAACTAGTTTACAATGA+CGG 0.618144 7_3:+39555381 None:intergenic
GCTCTCTGGAAGTTTAGCGA+AGG 0.619959 7_3:+39560619 None:intergenic
CCTGTTGTTTGACTCCAAGT+GGG 0.622101 7_3:+39563683 None:intergenic
AGGAAAGACACCTGGCAAGA+CGG 0.625522 7_3:-39560733 Msa1103580:CDS
GTTGATCTTGGAATTCCCGA+TGG 0.635226 7_3:-39560365 Msa1103580:CDS
CCATATTTGAAGGAACCTTG+CGG 0.637958 7_3:+39557936 None:intergenic
GCTGCACGTCCAAACCCGCA+AGG 0.640936 7_3:-39557951 Msa1103580:CDS
TATAGGTGGAATGTGTCTGC+CGG 0.642960 7_3:-39557975 Msa1103580:intron
GTCATCTAAATCAAAGAACA+AGG 0.649377 7_3:-39555567 Msa1103580:three_prime_UTR
AGCGTCAAAGGTGTTGAAGG+TGG 0.651691 7_3:+39557816 None:intergenic
TGTGAAACAGGATCTCAGGA+AGG 0.654880 7_3:-39560402 Msa1103580:intron
AACTTCCAGAGAGCTTCTGG+AGG 0.657834 7_3:-39560610 Msa1103580:CDS
CATGATGAATTAACAAACCG+AGG 0.657882 7_3:+39558367 None:intergenic
GCAAGGTTCCTTCAAATATG+GGG 0.659359 7_3:-39557934 Msa1103580:CDS
AAGAACCAAGAAGACAGTGA+TGG 0.659728 7_3:+39563796 None:intergenic
AGTTGAGGTTCTCGGCACGA+AGG 0.671541 7_3:+39556468 None:intergenic
TGTCACAACAAACTGGAATG+TGG 0.671910 7_3:-39560902 Msa1103580:CDS
GAGTGTCATCAGATCACATG+GGG 0.676779 7_3:+39563983 None:intergenic
CTGGTACACCAAGAGTCACA+AGG 0.678015 7_3:-39560500 Msa1103580:intron
TTACTTCTAGTGGAGACCGA+AGG 0.690875 7_3:-39558505 Msa1103580:CDS
CTGTTGTTTGACTCCAAGTG+GGG 0.693232 7_3:+39563684 None:intergenic
CCTGATAATGCAATATACTG+TGG 0.696580 7_3:-39556374 Msa1103580:CDS
TACAACATAGGAAAGACACC+TGG 0.697094 7_3:-39560741 Msa1103580:CDS
GCAACATTATAAAATTCTCG+GGG 0.701564 7_3:-39557790 Msa1103580:CDS
TGAGTGTCATCAGATCACAT+GGG 0.727201 7_3:+39563982 None:intergenic
CAAATGGTAGGACTGGACAG+TGG 0.746166 7_3:+39557653 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAAATAATTTAGAAAGA+TGG + chr7_3:39555459-39555478 None:intergenic 15.0%
!!! ATTCTAGTTTACTAAATTTT+GGG + chr7_3:39558074-39558093 None:intergenic 15.0%
!!! TATTCTAGTTTACTAAATTT+TGG + chr7_3:39558075-39558094 None:intergenic 15.0%
!!! TTCTTTCTTTTATGTTTTAT+AGG - chr7_3:39559126-39559145 Msa1103580:intron 15.0%
!!! ATTCAATTTTAAACTACTTT+CGG + chr7_3:39560658-39560677 None:intergenic 15.0%
!! CACATATATTAAAAAAAGTT+AGG - chr7_3:39561997-39562016 Msa1103580:intron 15.0%
!!! TTTCTTTTTATATTTGGAAA+TGG + chr7_3:39562369-39562388 None:intergenic 15.0%
!! ATTTCCAAATATAAAAAGAA+AGG - chr7_3:39562368-39562387 Msa1103580:intron 15.0%
!! TTTCCAAATATAAAAAGAAA+GGG - chr7_3:39562369-39562388 Msa1103580:intron 15.0%
!!! TTCTTGTTGTTTAAATATAA+AGG - chr7_3:39562715-39562734 Msa1103580:intron 15.0%
!!! TCTTGTTGTTTAAATATAAA+GGG - chr7_3:39562716-39562735 Msa1103580:intron 15.0%
!! TCACTTTCTTGAAATTATTA+TGG - chr7_3:39555875-39555894 Msa1103580:intron 20.0%
!! TTATGTCACATTTAATTCAT+GGG + chr7_3:39555960-39555979 None:intergenic 20.0%
!! ATATAATTCAATGTAATCAC+AGG + chr7_3:39556172-39556191 None:intergenic 20.0%
!! CCAATATGTATGATTAAATT+AGG + chr7_3:39556424-39556443 None:intergenic 20.0%
!! CCTAATTTAATCATACATAT+TGG - chr7_3:39556421-39556440 Msa1103580:CDS 20.0%
!!! ATCTAGTTCTTAAAAAAGTT+GGG + chr7_3:39557536-39557555 None:intergenic 20.0%
!!! TATCTAGTTCTTAAAAAAGT+TGG + chr7_3:39557537-39557556 None:intergenic 20.0%
!!! CTTTTTTAAGAACTAGATAA+AGG - chr7_3:39557538-39557557 Msa1103580:intron 20.0%
!! AATCCTGTATATAAAGAAAA+TGG - chr7_3:39557785-39557804 Msa1103580:CDS 20.0%
!! TAAAGATCTAACATAATCAA+TGG + chr7_3:39558040-39558059 None:intergenic 20.0%
!!! TTCTAGTTTACTAAATTTTG+GGG + chr7_3:39558073-39558092 None:intergenic 20.0%
!! ACATTTATTTGGAAATGAAA+AGG + chr7_3:39558116-39558135 None:intergenic 20.0%
!! GTTAAATGTTCACATTTATT+TGG + chr7_3:39558127-39558146 None:intergenic 20.0%
!!! TAATAAGGTATTTCTATTTC+AGG - chr7_3:39558398-39558417 Msa1103580:CDS 20.0%
!!! TATTTCTATTTCAGGTAATT+GGG - chr7_3:39558406-39558425 Msa1103580:CDS 20.0%
!!! TTTGTTGTGACATTTAAAAT+TGG + chr7_3:39558453-39558472 None:intergenic 20.0%
!! AACTTACCAAATAATAAATG+TGG - chr7_3:39559081-39559100 Msa1103580:intron 20.0%
!! AAGTTACTAAATACTATACT+GGG - chr7_3:39559289-39559308 Msa1103580:intron 20.0%
!!! TGCTTTTAATGATAATAGAA+AGG + chr7_3:39559837-39559856 None:intergenic 20.0%
!! TAGTGAAATTAACACAAATA+AGG - chr7_3:39560252-39560271 Msa1103580:intron 20.0%
!! GCAAATGTATATCATATTAT+TGG - chr7_3:39560282-39560301 Msa1103580:CDS 20.0%
!! AATGTATATCATATTATTGG+AGG - chr7_3:39560285-39560304 Msa1103580:CDS 20.0%
!! AATACTTTGATGTTAATTTC+AGG - chr7_3:39560355-39560374 Msa1103580:CDS 20.0%
!! TTCGATTCTATCAATAAAAT+AGG - chr7_3:39560384-39560403 Msa1103580:CDS 20.0%
!! ATTCCTAATTTGATAGAATT+TGG + chr7_3:39560477-39560496 None:intergenic 20.0%
!! GAAAAATAATAATTCATGAG+AGG + chr7_3:39560590-39560609 None:intergenic 20.0%
!!! TTTTTCTAGCTTGAAATTTT+TGG + chr7_3:39560682-39560701 None:intergenic 20.0%
!!! TAGTCATTCTGAAATAAAAA+AGG + chr7_3:39561170-39561189 None:intergenic 20.0%
!!! GTCATATTAAATGTCATTTA+AGG + chr7_3:39561255-39561274 None:intergenic 20.0%
!! TAAATACGATATACCATTAA+GGG + chr7_3:39561527-39561546 None:intergenic 20.0%
!! TATAGGAAAAATAAACATGT+TGG + chr7_3:39561789-39561808 None:intergenic 20.0%
!! TTGGAAAGAAGAAAAAAAAA+AGG + chr7_3:39562293-39562312 None:intergenic 20.0%
!! CTATAATTATAAGTCATCTT+TGG + chr7_3:39562312-39562331 None:intergenic 20.0%
!! TTCCAAATATAAAAAGAAAG+GGG - chr7_3:39562370-39562389 Msa1103580:intron 20.0%
!! AAATTAGAAAAAGTAACGAT+TGG + chr7_3:39562653-39562672 None:intergenic 20.0%
!!! TGTCTTTTTATAGATACTTA+AGG - chr7_3:39563086-39563105 Msa1103580:intron 20.0%
!! TGCTCATCTAAATATTAAAA+TGG + chr7_3:39563846-39563865 None:intergenic 20.0%
! TATGTCACATTTAATTCATG+GGG + chr7_3:39555959-39555978 None:intergenic 25.0%
! GTTATGTCACATTTAATTCA+TGG + chr7_3:39555961-39555980 None:intergenic 25.0%
!!! TAAAGTTTGGTTTTTGCAAT+TGG - chr7_3:39556017-39556036 Msa1103580:intron 25.0%
! TAAATCTCAAATGATAAGAG+AGG - chr7_3:39556302-39556321 Msa1103580:intron 25.0%
!! TTTTAAGCAGACAAATGTTA+AGG + chr7_3:39556341-39556360 None:intergenic 25.0%
! ATATTGGTATTTGTGATCAA+TGG - chr7_3:39556437-39556456 Msa1103580:CDS 25.0%
! GCTATTTATTACATTCAGTT+AGG - chr7_3:39556692-39556711 Msa1103580:intron 25.0%
! CAATTTCAATGTTGTAGAAA+GGG - chr7_3:39556721-39556740 Msa1103580:intron 25.0%
!! CAAGTCTTGTATAAATACTA+AGG + chr7_3:39556938-39556957 None:intergenic 25.0%
! TTTCAGTTGAAATTAGCAAT+GGG + chr7_3:39557453-39557472 None:intergenic 25.0%
!! TTTTCAGTTGAAATTAGCAA+TGG + chr7_3:39557454-39557473 None:intergenic 25.0%
! CTTCTTATAAAAGTTGCAAA+TGG - chr7_3:39557499-39557518 Msa1103580:intron 25.0%
!!! TCTAGTTCTTAAAAAAGTTG+GGG + chr7_3:39557535-39557554 None:intergenic 25.0%
! ATCTAACATAATCAATGGAA+TGG + chr7_3:39558035-39558054 None:intergenic 25.0%
!!! TTTACTAAATTTTGGGGTAA+GGG + chr7_3:39558067-39558086 None:intergenic 25.0%
! ACCTTATTACAAATAGAACA+GGG + chr7_3:39558387-39558406 None:intergenic 25.0%
! TACCTTATTACAAATAGAAC+AGG + chr7_3:39558388-39558407 None:intergenic 25.0%
!! GTATTTCTATTTCAGGTAAT+TGG - chr7_3:39558405-39558424 Msa1103580:CDS 25.0%
!! TTTTAAATGTCACAACAAAC+TGG - chr7_3:39558454-39558473 Msa1103580:CDS 25.0%
!!! TTTCAAGTTAAAGATCAGAT+AGG - chr7_3:39558705-39558724 Msa1103580:intron 25.0%
!! TTCAAGTTAAAGATCAGATA+GGG - chr7_3:39558706-39558725 Msa1103580:intron 25.0%
! AATAATATAACATCACCATC+TGG + chr7_3:39558834-39558853 None:intergenic 25.0%
!! TTATATTATTTCTCAGTGAC+TGG - chr7_3:39558844-39558863 Msa1103580:intron 25.0%
! AAGAAAATGTTTGAAAGAGA+GGG + chr7_3:39559189-39559208 None:intergenic 25.0%
! CAAGTTACTAAATACTATAC+TGG - chr7_3:39559288-39559307 Msa1103580:intron 25.0%
! TCTACGTTCATATAAAAAGT+GGG + chr7_3:39559322-39559341 None:intergenic 25.0%
!! ACTTTTTATATGAACGTAGA+CGG - chr7_3:39559322-39559341 Msa1103580:intron 25.0%
! GAATATTGTAGTATAGACTA+TGG + chr7_3:39559611-39559630 None:intergenic 25.0%
!! TATCTGTTTTCTTTTGAACT+GGG + chr7_3:39559737-39559756 None:intergenic 25.0%
! AGTTCAAAAGAAAACAGATA+CGG - chr7_3:39559737-39559756 Msa1103580:intron 25.0%
! GAATACACAATATTTGATCA+TGG - chr7_3:39559774-39559793 Msa1103580:intron 25.0%
! CAGTTTGTGTTTAAATACTA+CGG - chr7_3:39559874-39559893 Msa1103580:intron 25.0%
! TTCAAACATCGTTTCAATAT+CGG + chr7_3:39560026-39560045 None:intergenic 25.0%
!! ATTACTGTTTCTTCAAAACA+TGG - chr7_3:39560047-39560066 Msa1103580:intron 25.0%
! AAAATGTACTCTATATTAGC+CGG - chr7_3:39560194-39560213 Msa1103580:intron 25.0%
! GAGGCAAATATTTCATATTA+AGG - chr7_3:39560304-39560323 Msa1103580:CDS 25.0%
!!! ACTGTAGTTTTATTAACAAG+AGG - chr7_3:39560409-39560428 Msa1103580:intron 25.0%
! TTATTAACAAGAGGCAAATT+TGG - chr7_3:39560418-39560437 Msa1103580:intron 25.0%
! GATCCAAATTCTATCAAATT+AGG - chr7_3:39560471-39560490 Msa1103580:intron 25.0%
! AAAGTTAAAGAATGATCAGA+CGG + chr7_3:39561295-39561314 None:intergenic 25.0%
! ATCTGAAAATGGTATTCTAT+AGG - chr7_3:39561371-39561390 Msa1103580:intron 25.0%
! GTAAATACGATATACCATTA+AGG + chr7_3:39561528-39561547 None:intergenic 25.0%
! AATATATGTGAAACTGTCAA+AGG + chr7_3:39561987-39562006 None:intergenic 25.0%
!! AAAGTTAGGAGTGTAATTAA+TGG - chr7_3:39562011-39562030 Msa1103580:intron 25.0%
!! TACCCCTTTCTTTTTATATT+TGG + chr7_3:39562375-39562394 None:intergenic 25.0%
!!! AAGAAAACCTTCAAGTTTTA+AGG + chr7_3:39562471-39562490 None:intergenic 25.0%
! TTATCAAATAGCAGCTATAA+TGG - chr7_3:39562516-39562535 Msa1103580:intron 25.0%
! AGAAGTAAGTTGTAATGAAA+TGG + chr7_3:39562799-39562818 None:intergenic 25.0%
! ATTGTCAAGAGATACTAAAA+TGG + chr7_3:39562861-39562880 None:intergenic 25.0%
! AATTGTGAAATAAGTTGCTA+TGG + chr7_3:39563051-39563070 None:intergenic 25.0%
!! TATGTGCTTTAACTTAAACA+AGG - chr7_3:39563181-39563200 Msa1103580:intron 25.0%
!! ATGTGCTTTAACTTAAACAA+GGG - chr7_3:39563182-39563201 Msa1103580:intron 25.0%
! AAGCAAAATTTCCTATTCAA+TGG + chr7_3:39563872-39563891 None:intergenic 25.0%
!! ATTTTGCTTGTATAACATGT+TGG - chr7_3:39563883-39563902 Msa1103580:five_prime_UTR 25.0%
!! GTAAAACTAGTTTACAATGA+CGG + chr7_3:39563985-39564004 None:intergenic 25.0%
!! ATCGTGTGTTACTCTATTTT+GGG + chr7_3:39555546-39555565 None:intergenic 30.0%
!!! TTCTTAGATACTGCTTTTTC+TGG - chr7_3:39555609-39555628 Msa1103580:CDS 30.0%
CAGAAAAAAGAGAAGAGAAA+AGG + chr7_3:39555714-39555733 None:intergenic 30.0%
CTTAACTTATAGGCATAGTA+AGG + chr7_3:39555764-39555783 None:intergenic 30.0%
CAGAACTACTCTTAACTTAT+AGG + chr7_3:39555774-39555793 None:intergenic 30.0%
! CACTGACAATTTTAGACTAA+AGG - chr7_3:39555805-39555824 Msa1103580:intron 30.0%
TAAATTGTAAACACGCGTAT+CGG + chr7_3:39555849-39555868 None:intergenic 30.0%
TTATGTATTAGTGTCGTGTT+TGG - chr7_3:39555902-39555921 Msa1103580:intron 30.0%
AAATGTGACATAACTCTTGT+AGG - chr7_3:39555967-39555986 Msa1103580:intron 30.0%
AATGTGACATAACTCTTGTA+GGG - chr7_3:39555968-39555987 Msa1103580:intron 30.0%
! GTTAGCAGTGATTTAAAGTT+TGG - chr7_3:39556004-39556023 Msa1103580:intron 30.0%
!! ACATGAGGTTTTAACGATAT+AGG + chr7_3:39556539-39556558 None:intergenic 30.0%
GCAATTTCAATGTTGTAGAA+AGG - chr7_3:39556720-39556739 Msa1103580:intron 30.0%
TTGTCATCAATGAAATTTGC+AGG + chr7_3:39556803-39556822 None:intergenic 30.0%
AAAAGAAAACGATTACACAG+AGG - chr7_3:39556821-39556840 Msa1103580:intron 30.0%
AAACGAAAATCCCAAAACAA+TGG + chr7_3:39557070-39557089 None:intergenic 30.0%
CAGGAAGAAATTAAGAAACA+TGG + chr7_3:39557141-39557160 None:intergenic 30.0%
!!! TTTGAGGACAATGTTGATTT+TGG + chr7_3:39557226-39557245 None:intergenic 30.0%
AGAGAACTGTTGTTGAATAA+TGG - chr7_3:39557255-39557274 Msa1103580:intron 30.0%
TTCAGTTGAAATTAGCAATG+GGG + chr7_3:39557452-39557471 None:intergenic 30.0%
CTAATTTCAACTGAAAACCA+CGG - chr7_3:39557457-39557476 Msa1103580:intron 30.0%
CCATCATAAAGAAAGTTAGA+TGG + chr7_3:39557755-39557774 None:intergenic 30.0%
CCATCTAACTTTCTTTATGA+TGG - chr7_3:39557752-39557771 Msa1103580:CDS 30.0%
! GCTCCATTTTCTTTATATAC+AGG + chr7_3:39557791-39557810 None:intergenic 30.0%
ATAAAGAAAATGGAGCACAA+AGG - chr7_3:39557795-39557814 Msa1103580:CDS 30.0%
TAAAGAAAATGGAGCACAAA+GGG - chr7_3:39557796-39557815 Msa1103580:CDS 30.0%
!!! GTTTACTAAATTTTGGGGTA+AGG + chr7_3:39558068-39558087 None:intergenic 30.0%
TGGAAATGAAAAGGTTTACA+GGG + chr7_3:39558107-39558126 None:intergenic 30.0%
TTGGAAATGAAAAGGTTTAC+AGG + chr7_3:39558108-39558127 None:intergenic 30.0%
ACTTCAAACAAGTTCAATGT+TGG + chr7_3:39558201-39558220 None:intergenic 30.0%
!!! GCTTTTGTTGTTTACATGTT+TGG - chr7_3:39558320-39558339 Msa1103580:CDS 30.0%
ACCCTGTTCTATTTGTAATA+AGG - chr7_3:39558383-39558402 Msa1103580:CDS 30.0%
TTTGCAACTATTAATGACGA+TGG - chr7_3:39558562-39558581 Msa1103580:CDS 30.0%
TATGTCAGATAGTTAAATGC+AGG - chr7_3:39558592-39558611 Msa1103580:intron 30.0%
! TTTGGTAAGTTATGCCATTT+GGG + chr7_3:39559072-39559091 None:intergenic 30.0%
ATTTGGTAAGTTATGCCATT+TGG + chr7_3:39559073-39559092 None:intergenic 30.0%
CAGGTTCCACATTTATTATT+TGG + chr7_3:39559090-39559109 None:intergenic 30.0%
CAAATAATAAATGTGGAACC+TGG - chr7_3:39559088-39559107 Msa1103580:intron 30.0%
! CTTTTATGTTTTATAGGCAC+TGG - chr7_3:39559132-39559151 Msa1103580:intron 30.0%
GAAGAAAATGTTTGAAAGAG+AGG + chr7_3:39559190-39559209 None:intergenic 30.0%
AACTTCTATGCATTTCTTTG+TGG - chr7_3:39559243-39559262 Msa1103580:intron 30.0%
GTCTACGTTCATATAAAAAG+TGG + chr7_3:39559323-39559342 None:intergenic 30.0%
GAAAATATATCCGAGATTCA+AGG - chr7_3:39559651-39559670 Msa1103580:intron 30.0%
! ATCTGTTTTCTTTTGAACTG+GGG + chr7_3:39559736-39559755 None:intergenic 30.0%
! GTATCTGTTTTCTTTTGAAC+TGG + chr7_3:39559738-39559757 None:intergenic 30.0%
ACATTTCTTTGGATGATACT+GGG + chr7_3:39559958-39559977 None:intergenic 30.0%
CTATGTCTAAATCTGTTTCA+AGG - chr7_3:39560122-39560141 Msa1103580:intron 30.0%
AGAATATAGCACTGTTAACA+TGG - chr7_3:39560146-39560165 Msa1103580:intron 30.0%
GAATATAGCACTGTTAACAT+GGG - chr7_3:39560147-39560166 Msa1103580:intron 30.0%
TTTCATATTAAGGACAGAAG+TGG - chr7_3:39560314-39560333 Msa1103580:CDS 30.0%
TGATAGAATTTGGATCAAGT+TGG + chr7_3:39560467-39560486 None:intergenic 30.0%
TTATCCTCTTGTCTTAAACA+GGG - chr7_3:39560763-39560782 Msa1103580:intron 30.0%
AAATCACAACTTACTTCTAG+TGG - chr7_3:39560848-39560867 Msa1103580:intron 30.0%
ATATTCATTCTTGGTTACGA+TGG - chr7_3:39560935-39560954 Msa1103580:CDS 30.0%
AAGGATTATCTTGATCAGAA+AGG + chr7_3:39561094-39561113 None:intergenic 30.0%
GCTTGATTTATAGAGAAAGA+AGG + chr7_3:39561113-39561132 None:intergenic 30.0%
TAAATCAAGCAAGATCAGTA+AGG - chr7_3:39561123-39561142 Msa1103580:intron 30.0%
! AGAATACCATTTTCAGATGA+GGG + chr7_3:39561369-39561388 None:intergenic 30.0%
! TAGAATACCATTTTCAGATG+AGG + chr7_3:39561370-39561389 None:intergenic 30.0%
TGAAAATGGTATTCTATAGG+TGG - chr7_3:39561374-39561393 Msa1103580:intron 30.0%
GCGCAACATTATAAAATTCT+CGG - chr7_3:39561571-39561590 Msa1103580:intron 30.0%
CGCAACATTATAAAATTCTC+GGG - chr7_3:39561572-39561591 Msa1103580:intron 30.0%
GCAACATTATAAAATTCTCG+GGG - chr7_3:39561573-39561592 Msa1103580:intron 30.0%
! AGCTTGATTTTCCAAATAGA+TGG - chr7_3:39561602-39561621 Msa1103580:intron 30.0%
!! GATATGCATTCTTTGTTGTT+GGG - chr7_3:39561737-39561756 Msa1103580:intron 30.0%
CTAAATTCAGAGTTGCATAT+AGG + chr7_3:39561806-39561825 None:intergenic 30.0%
CTATATGCAACTCTGAATTT+AGG - chr7_3:39561804-39561823 Msa1103580:intron 30.0%
!! CAGAAGTACTTACAATAAGT+GGG - chr7_3:39561892-39561911 Msa1103580:intron 30.0%
GCGATTATAAATAGGTACAA+AGG + chr7_3:39561965-39561984 None:intergenic 30.0%
TGTCAAAGGCGATTATAAAT+AGG + chr7_3:39561973-39561992 None:intergenic 30.0%
!! AGGAGTGTAATTAATGGATT+TGG - chr7_3:39562017-39562036 Msa1103580:intron 30.0%
AAAATACCGAGCTTCAAATT+TGG - chr7_3:39562146-39562165 Msa1103580:intron 30.0%
TGCATGGGATGTATTAATAA+GGG - chr7_3:39562208-39562227 Msa1103580:intron 30.0%
TGCTATGAGACTTATGTTTA+CGG - chr7_3:39562264-39562283 Msa1103580:intron 30.0%
GAATAGAGTTGTTTGTTTCA+TGG - chr7_3:39562410-39562429 Msa1103580:intron 30.0%
TTTGCTACCTTAAAACTTGA+AGG - chr7_3:39562461-39562480 Msa1103580:intron 30.0%
!! TAATTTGCTTCCCATGAATT+TGG - chr7_3:39562667-39562686 Msa1103580:intron 30.0%
TGCTGTTATTGCAAGTAAAT+TGG - chr7_3:39562741-39562760 Msa1103580:intron 30.0%
CAACTTGAAGATAAGATTCT+TGG + chr7_3:39562934-39562953 None:intergenic 30.0%
! AAGGAACTTTTACCTTTGAA+GGG + chr7_3:39563026-39563045 None:intergenic 30.0%
! TAAGGAACTTTTACCTTTGA+AGG + chr7_3:39563027-39563046 None:intergenic 30.0%
GAAATAAGTTGCTATGGTTA+AGG + chr7_3:39563045-39563064 None:intergenic 30.0%
TAGATACTTAAGGTTGTCAT+AGG - chr7_3:39563096-39563115 Msa1103580:intron 30.0%
!! AAGCTAACTCATGATTTGTT+TGG - chr7_3:39563128-39563147 Msa1103580:intron 30.0%
ATCAAAGGGCAAAAGAAATT+TGG + chr7_3:39563380-39563399 None:intergenic 30.0%
CTCAAAATAATTCAAGATGC+AGG + chr7_3:39563409-39563428 None:intergenic 30.0%
!! CTGCATCTTGAATTATTTTG+AGG - chr7_3:39563407-39563426 Msa1103580:intron 30.0%
CGATTCATGATTTCGAAAAT+AGG - chr7_3:39563536-39563555 Msa1103580:intron 30.0%
AACAGGCACAATAGTTATTA+GGG + chr7_3:39563633-39563652 None:intergenic 30.0%
AAACAGGCACAATAGTTATT+AGG + chr7_3:39563634-39563653 None:intergenic 30.0%
AAAACTGGTATTTGTGAGAT+TGG + chr7_3:39563671-39563690 None:intergenic 30.0%
!! ATTCTAGAATTACTGCTTAG+AGG + chr7_3:39563705-39563724 None:intergenic 30.0%
GTCATCTAAATCAAAGAACA+AGG - chr7_3:39563796-39563815 Msa1103580:CDS 30.0%
AGGTCATTCTTTGTAATATG+AGG - chr7_3:39563816-39563835 Msa1103580:exon 30.0%
!! TGTTACTCTATTTTGGGTAG+GGG + chr7_3:39555540-39555559 None:intergenic 35.0%
!! GTGTTACTCTATTTTGGGTA+GGG + chr7_3:39555541-39555560 None:intergenic 35.0%
!! TGTGTTACTCTATTTTGGGT+AGG + chr7_3:39555542-39555561 None:intergenic 35.0%
!! CATCGTGTGTTACTCTATTT+TGG + chr7_3:39555547-39555566 None:intergenic 35.0%
TCCAGTCGTAGTAAACAAAA+GGG + chr7_3:39555638-39555657 None:intergenic 35.0%
!! TTTTAGACTAAAGGTGTGTC+TGG - chr7_3:39555814-39555833 Msa1103580:intron 35.0%
!! GTATTTCTAGCTGAACAAGA+AGG + chr7_3:39556060-39556079 None:intergenic 35.0%
ACCATACTGACAACAAAATG+CGG + chr7_3:39556101-39556120 None:intergenic 35.0%
! ATGAGACCAAGTTGAATTGA+CGG + chr7_3:39556491-39556510 None:intergenic 35.0%
TAAAACCTCATGTTCTGTCA+AGG - chr7_3:39556546-39556565 Msa1103580:intron 35.0%
AATAGCAGTCACTGAATAGA+GGG + chr7_3:39556678-39556697 None:intergenic 35.0%
AAATAGCAGTCACTGAATAG+AGG + chr7_3:39556679-39556698 None:intergenic 35.0%
TGCTCTATAGTCAAAGACTT+GGG - chr7_3:39557008-39557027 Msa1103580:intron 35.0%
CGATGTTTGGCTATGAAATT+CGG + chr7_3:39557043-39557062 None:intergenic 35.0%
AAACAATGGAACACGATGTT+TGG + chr7_3:39557056-39557075 None:intergenic 35.0%
! AACATCGTGTTCCATTGTTT+TGG - chr7_3:39557056-39557075 Msa1103580:intron 35.0%
! ACATCGTGTTCCATTGTTTT+GGG - chr7_3:39557057-39557076 Msa1103580:intron 35.0%
!!! ACTTGCAGAGTCTTTTTTGT+TGG - chr7_3:39557167-39557186 Msa1103580:intron 35.0%
!!! CTTGCAGAGTCTTTTTTGTT+GGG - chr7_3:39557168-39557187 Msa1103580:intron 35.0%
!!! TTGCAGAGTCTTTTTTGTTG+GGG - chr7_3:39557169-39557188 Msa1103580:intron 35.0%
!!! AGGACAATGTTGATTTTGGA+GGG + chr7_3:39557222-39557241 None:intergenic 35.0%
GTTCTCTGATTTCAACTTTG+AGG + chr7_3:39557242-39557261 None:intergenic 35.0%
! TCATTGGATCAGAACTTGTT+GGG - chr7_3:39557318-39557337 Msa1103580:intron 35.0%
ATTAACAGAGCTTCAAGAAC+AGG + chr7_3:39557406-39557425 None:intergenic 35.0%
TCAGTTGAAATTAGCAATGG+GGG + chr7_3:39557451-39557470 None:intergenic 35.0%
AACTGAAAACCACGGAAAAT+CGG - chr7_3:39557465-39557484 Msa1103580:intron 35.0%
AGTTCTTAAAAAAGTTGGGG+TGG + chr7_3:39557532-39557551 None:intergenic 35.0%
GATTCTGAGCTCTTTCTAAA+TGG - chr7_3:39557681-39557700 Msa1103580:CDS 35.0%
! CTTTCTTTATGATGGCGAAT+CGG - chr7_3:39557760-39557779 Msa1103580:CDS 35.0%
TCAAGCTAGATGTAATCAGT+TGG + chr7_3:39557833-39557852 None:intergenic 35.0%
! ACATCTAGCTTGAGTACTAT+TGG - chr7_3:39557840-39557859 Msa1103580:CDS 35.0%
! CATCTAGCTTGAGTACTATT+GGG - chr7_3:39557841-39557860 Msa1103580:CDS 35.0%
TCATGTGCTAATTGCATTTC+CGG - chr7_3:39557888-39557907 Msa1103580:CDS 35.0%
! AATGGAGAGGTACATTTAGT+TGG + chr7_3:39558017-39558036 None:intergenic 35.0%
ACATAATCAATGGAATGGAG+AGG + chr7_3:39558030-39558049 None:intergenic 35.0%
! GAAAAGGTTTACAGGGATTT+TGG + chr7_3:39558100-39558119 None:intergenic 35.0%
CACAAGTCTGATAACAATGA+AGG + chr7_3:39558253-39558272 None:intergenic 35.0%
TTACAAATAGAACAGGGTGA+GGG + chr7_3:39558381-39558400 None:intergenic 35.0%
ATTACAAATAGAACAGGGTG+AGG + chr7_3:39558382-39558401 None:intergenic 35.0%
! GTGACATTTAAAATTGGTCC+AGG + chr7_3:39558447-39558466 None:intergenic 35.0%
TGTTACCAATGCAGAAGTAA+GGG + chr7_3:39558516-39558535 None:intergenic 35.0%
CAGATAGTTAAATGCAGGAA+TGG - chr7_3:39558597-39558616 Msa1103580:intron 35.0%
ACCAAATAAGTCACAGAAAG+CGG + chr7_3:39558894-39558913 None:intergenic 35.0%
ACCATTGCATATTGTGAAAC+AGG - chr7_3:39558949-39558968 Msa1103580:intron 35.0%
TCCTGTTTCACAATATGCAA+TGG + chr7_3:39558953-39558972 None:intergenic 35.0%
ATATTGTGAAACAGGATCTC+AGG - chr7_3:39558957-39558976 Msa1103580:intron 35.0%
TCCATTGATAAGAACACCAT+CGG + chr7_3:39559017-39559036 None:intergenic 35.0%
! GGTGTTCTTATCAATGGATT+CGG - chr7_3:39559019-39559038 Msa1103580:intron 35.0%
GAATGACCTATATTCTTACC+AGG + chr7_3:39559109-39559128 None:intergenic 35.0%
! GCATTTCACAGTTATTTCAC+TGG - chr7_3:39559361-39559380 Msa1103580:intron 35.0%
CAAGGTTAATGTCGTAAACT+GGG + chr7_3:39559901-39559920 None:intergenic 35.0%
ACAAGGTTAATGTCGTAAAC+TGG + chr7_3:39559902-39559921 None:intergenic 35.0%
GACATTTCTTTGGATGATAC+TGG + chr7_3:39559959-39559978 None:intergenic 35.0%
CTCGTAGTTTACTGATAAGT+GGG + chr7_3:39559991-39560010 None:intergenic 35.0%
ACTCGTAGTTTACTGATAAG+TGG + chr7_3:39559992-39560011 None:intergenic 35.0%
AGATACACAAGAGGTTGTTA+AGG - chr7_3:39560218-39560237 Msa1103580:intron 35.0%
!!! GGATCAAGTTGGAGATTTTT+AGG + chr7_3:39560456-39560475 None:intergenic 35.0%
CACAAACATTTCAATGGTTC+TGG + chr7_3:39560537-39560556 None:intergenic 35.0%
CTTATCCTCTTGTCTTAAAC+AGG - chr7_3:39560762-39560781 Msa1103580:intron 35.0%
!! TTTTCCCTGTTTAAGACAAG+AGG + chr7_3:39560770-39560789 None:intergenic 35.0%
TCTCAACAAGCTTGAATTTC+AGG - chr7_3:39560820-39560839 Msa1103580:intron 35.0%
ACGAACATGGATATTCATGT+TGG - chr7_3:39560906-39560925 Msa1103580:CDS 35.0%
TGGTCAGTCATATTCATTCT+TGG - chr7_3:39560926-39560945 Msa1103580:CDS 35.0%
CATGATGAATTAACAAACCG+AGG + chr7_3:39560999-39561018 None:intergenic 35.0%
!! CTCGGTTTGTTAATTCATCA+TGG - chr7_3:39560997-39561016 Msa1103580:intron 35.0%
AGAATTAGCGTAGTGCAAAA+TGG + chr7_3:39561042-39561061 None:intergenic 35.0%
TTATCTTGATCAGAAAGGCT+AGG + chr7_3:39561089-39561108 None:intergenic 35.0%
TTTGAACGATCGTGATTCTA+TGG + chr7_3:39561346-39561365 None:intergenic 35.0%
TTCAAACCCTCATCTGAAAA+TGG - chr7_3:39561360-39561379 Msa1103580:intron 35.0%
AGTAATGTCCCCATATTTGA+AGG + chr7_3:39561440-39561459 None:intergenic 35.0%
TTCCAAATAGATGGATGAAC+AGG - chr7_3:39561611-39561630 Msa1103580:intron 35.0%
AGAGAGACATCAACTTTAGA+AGG + chr7_3:39561637-39561656 None:intergenic 35.0%
GTTGATGTCTCTCTCATTAA+TGG - chr7_3:39561643-39561662 Msa1103580:intron 35.0%
AGAATGCATATCCATCCAAA+TGG + chr7_3:39561729-39561748 None:intergenic 35.0%
! GGATATGCATTCTTTGTTGT+TGG - chr7_3:39561736-39561755 Msa1103580:intron 35.0%
! TTGTTGTTGGGTGAGAATTT+AGG - chr7_3:39561749-39561768 Msa1103580:intron 35.0%
TTCTCATCTGAATTGTAGCA+TGG - chr7_3:39561844-39561863 Msa1103580:intron 35.0%
! CTGAATTGTAGCATGGATTT+TGG - chr7_3:39561851-39561870 Msa1103580:intron 35.0%
!! GCAGAAGTACTTACAATAAG+TGG - chr7_3:39561891-39561910 Msa1103580:intron 35.0%
AGTACTTACAATAAGTGGGA+CGG - chr7_3:39561896-39561915 Msa1103580:intron 35.0%
CTGCATGGGATGTATTAATA+AGG - chr7_3:39562207-39562226 Msa1103580:intron 35.0%
GCATGGGATGTATTAATAAG+GGG - chr7_3:39562209-39562228 Msa1103580:intron 35.0%
TTCATGGATTCCTCAAAAGA+AGG - chr7_3:39562426-39562445 Msa1103580:intron 35.0%
CTCAAAAGAAGGCTTCATTT+GGG - chr7_3:39562437-39562456 Msa1103580:intron 35.0%
! AGCTGCTATTTGATAACACT+AGG + chr7_3:39562512-39562531 None:intergenic 35.0%
!! AATGGTGCTATATAGCATAG+TGG - chr7_3:39562534-39562553 Msa1103580:intron 35.0%
GTGTGTGATTCCAAATTCAT+GGG + chr7_3:39562680-39562699 None:intergenic 35.0%
TGTGTGTGATTCCAAATTCA+TGG + chr7_3:39562681-39562700 None:intergenic 35.0%
TTAGTATCTCTTGACAATGC+TGG - chr7_3:39562863-39562882 Msa1103580:intron 35.0%
CCACAGTATATTGCATTATC+AGG + chr7_3:39562992-39563011 None:intergenic 35.0%
! CCTGATAATGCAATATACTG+TGG - chr7_3:39562989-39563008 Msa1103580:intron 35.0%
GATGCAGGTGATAAATCAAA+GGG + chr7_3:39563394-39563413 None:intergenic 35.0%
AGATGCAGGTGATAAATCAA+AGG + chr7_3:39563395-39563414 None:intergenic 35.0%
! CACAAATACCAGTTTTCTGT+AGG - chr7_3:39563675-39563694 Msa1103580:intron 35.0%
ACAAACTTTCAGTTAGAGCT+AGG + chr7_3:39563749-39563768 None:intergenic 35.0%
GCTCTAACTGAAAGTTTGTA+TGG - chr7_3:39563750-39563769 Msa1103580:CDS 35.0%
ATGTATGAGAACTGTGAACT+AGG - chr7_3:39563950-39563969 Msa1103580:five_prime_UTR 35.0%
TGAGTGTCATCAGATCACAT+GGG + chr7_3:39555384-39555403 None:intergenic 40.0%
!! AGAAGAAGAAGAAGGTGTTG+AGG + chr7_3:39555484-39555503 None:intergenic 40.0%
GTAGAGAGAGAAGAAGAAGA+AGG + chr7_3:39555492-39555511 None:intergenic 40.0%
AAGAACCAAGAAGACAGTGA+TGG + chr7_3:39555570-39555589 None:intergenic 40.0%
!! AGAAGCAGCATAGAAGTGTT+GGG + chr7_3:39555593-39555612 None:intergenic 40.0%
! AAGAAGCAGCATAGAAGTGT+TGG + chr7_3:39555594-39555613 None:intergenic 40.0%
!! ACCCTTTTGTTTACTACGAC+TGG - chr7_3:39555634-39555653 Msa1103580:CDS 40.0%
GTCCAGTCGTAGTAAACAAA+AGG + chr7_3:39555639-39555658 None:intergenic 40.0%
!! ATTAGTGTCGTGTTTGGTGT+CGG - chr7_3:39555908-39555927 Msa1103580:intron 40.0%
!! ACCGCATTTTGTTGTCAGTA+TGG - chr7_3:39556097-39556116 Msa1103580:intron 40.0%
! TGAGACCAAGTTGAATTGAC+GGG + chr7_3:39556490-39556509 None:intergenic 40.0%
CAACCTAACACTAGCACTAA+CGG + chr7_3:39556752-39556771 None:intergenic 40.0%
! AGTGCTAGTGTTAGGTTGTT+AGG - chr7_3:39556754-39556773 Msa1103580:intron 40.0%
! TGTTAGGTTGTTAGGATTCC+TGG - chr7_3:39556762-39556781 Msa1103580:intron 40.0%
AGGATTCCTGGAACACTATT+AGG - chr7_3:39556774-39556793 Msa1103580:intron 40.0%
AGGAATCCTAATAGTGTTCC+AGG + chr7_3:39556783-39556802 None:intergenic 40.0%
CAGAGGATGCTAATTCCTAT+AGG - chr7_3:39556838-39556857 Msa1103580:intron 40.0%
!! AATTCCTATAGGAAGTGTCG+AGG - chr7_3:39556849-39556868 Msa1103580:intron 40.0%
!! ATTCCTATAGGAAGTGTCGA+GGG - chr7_3:39556850-39556869 Msa1103580:intron 40.0%
TCGGGGATATTGTTGTAATC+TGG - chr7_3:39556911-39556930 Msa1103580:intron 40.0%
CTGCTCTATAGTCAAAGACT+TGG - chr7_3:39557007-39557026 Msa1103580:intron 40.0%
!!! GGACAATGTTGATTTTGGAG+GGG + chr7_3:39557221-39557240 None:intergenic 40.0%
!!! GAGGACAATGTTGATTTTGG+AGG + chr7_3:39557223-39557242 None:intergenic 40.0%
GTCATTGGATCAGAACTTGT+TGG - chr7_3:39557317-39557336 Msa1103580:intron 40.0%
ACTTGTGTCATCAATCAGCA+GGG + chr7_3:39557352-39557371 None:intergenic 40.0%
TACTTGTGTCATCAATCAGC+AGG + chr7_3:39557353-39557372 None:intergenic 40.0%
ACAAGTACCCAGTACTGTTT+GGG - chr7_3:39557366-39557385 Msa1103580:intron 40.0%
AAGAACAGGTTCCTGTACAT+AGG + chr7_3:39557392-39557411 None:intergenic 40.0%
GTTAATAAGTCAGCCTACAC+AGG - chr7_3:39557420-39557439 Msa1103580:intron 40.0%
ACTGAAAACCACGGAAAATC+GGG - chr7_3:39557466-39557485 Msa1103580:intron 40.0%
TAGATAAAGGCCATAGTACC+TGG - chr7_3:39557551-39557570 Msa1103580:intron 40.0%
AAATTGTCAGCCAGGTACTA+TGG + chr7_3:39557564-39557583 None:intergenic 40.0%
TAGTACCTGGCTGACAATTT+CGG - chr7_3:39557564-39557583 Msa1103580:intron 40.0%
GTAATAGACACCTGTCTATG+AGG - chr7_3:39557603-39557622 Msa1103580:intron 40.0%
GAAAATCCATCCTCATAGAC+AGG + chr7_3:39557616-39557635 None:intergenic 40.0%
CGAAATAAAGGCAGGAGATT+GGG + chr7_3:39557646-39557665 None:intergenic 40.0%
TCGAAATAAAGGCAGGAGAT+TGG + chr7_3:39557647-39557666 None:intergenic 40.0%
! ATCTCCTGCCTTTATTTCGA+AGG - chr7_3:39557647-39557666 Msa1103580:CDS 40.0%
ACAGGAAGCCTTCGAAATAA+AGG + chr7_3:39557658-39557677 None:intergenic 40.0%
AAAGAGCTCAGAATCATCAC+AGG + chr7_3:39557676-39557695 None:intergenic 40.0%
! ATGTAATCAGTTGGAGTACC+TGG + chr7_3:39557824-39557843 None:intergenic 40.0%
GCACATGACATCAAGTTAGA+TGG + chr7_3:39557876-39557895 None:intergenic 40.0%
CATGTGCTAATTGCATTTCC+GGG - chr7_3:39557889-39557908 Msa1103580:CDS 40.0%
ATTGAGAATGTGTTCCGTAC+TGG + chr7_3:39557923-39557942 None:intergenic 40.0%
ACTTGTGCATGTCAGAAATG+TGG - chr7_3:39558266-39558285 Msa1103580:CDS 40.0%
TACAAATAGAACAGGGTGAG+GGG + chr7_3:39558380-39558399 None:intergenic 40.0%
TGTCACAACAAACTGGAATG+TGG - chr7_3:39558461-39558480 Msa1103580:CDS 40.0%
ATGAACCCTTACTTCTGCAT+TGG - chr7_3:39558508-39558527 Msa1103580:CDS 40.0%
GTGTTACCAATGCAGAAGTA+AGG + chr7_3:39558517-39558536 None:intergenic 40.0%
TACAACATAGGAAAGACACC+TGG - chr7_3:39558622-39558641 Msa1103580:intron 40.0%
CCATTGATAAGAACACCATC+GGG + chr7_3:39559016-39559035 None:intergenic 40.0%
GTGGAACCTGGTAAGAATAT+AGG - chr7_3:39559100-39559119 Msa1103580:intron 40.0%
! GGACTAGTACGTGCAATATT+TGG - chr7_3:39559153-39559172 Msa1103580:intron 40.0%
AAATGTGCAGCACATATCAC+TGG + chr7_3:39559212-39559231 None:intergenic 40.0%
!! TCAAGTTGAGCCTTGAATCT+CGG + chr7_3:39559664-39559683 None:intergenic 40.0%
ATTAACCTTGTGTCGTATCG+TGG - chr7_3:39559911-39559930 Msa1103580:intron 40.0%
TTAACCTTGTGTCGTATCGT+GGG - chr7_3:39559912-39559931 Msa1103580:intron 40.0%
! AGTTTACTGATAAGTGGGCT+TGG + chr7_3:39559986-39560005 None:intergenic 40.0%
TGCTACGAAATGGTTTCTCT+AGG + chr7_3:39560085-39560104 None:intergenic 40.0%
ACAACCTCTTGTGTATCTAC+CGG + chr7_3:39560216-39560235 None:intergenic 40.0%
CAGCAGCACAAACATTTCAA+TGG + chr7_3:39560543-39560562 None:intergenic 40.0%
CAGGGAAAACATATCGCATA+CGG - chr7_3:39560781-39560800 Msa1103580:intron 40.0%
AGGGAAAACATATCGCATAC+GGG - chr7_3:39560782-39560801 Msa1103580:intron 40.0%
TGAATTAACAAACCGAGGAC+TGG + chr7_3:39560994-39561013 None:intergenic 40.0%
TTTGCACTACGCTAATTCTC+AGG - chr7_3:39561043-39561062 Msa1103580:intron 40.0%
TTGCACTACGCTAATTCTCA+GGG - chr7_3:39561044-39561063 Msa1103580:intron 40.0%
CATATTTGAAGGAACCTTGC+GGG + chr7_3:39561429-39561448 None:intergenic 40.0%
CCATATTTGAAGGAACCTTG+CGG + chr7_3:39561430-39561449 None:intergenic 40.0%
CGCAAGGTTCCTTCAAATAT+GGG - chr7_3:39561428-39561447 Msa1103580:intron 40.0%
GCAAGGTTCCTTCAAATATG+GGG - chr7_3:39561429-39561448 Msa1103580:intron 40.0%
AGACCTCCAGAGCTTATAAA+CGG - chr7_3:39561487-39561506 Msa1103580:intron 40.0%
! TTTCCGTTTATAAGCTCTGG+AGG + chr7_3:39561493-39561512 None:intergenic 40.0%
CACTTTCCGTTTATAAGCTC+TGG + chr7_3:39561496-39561515 None:intergenic 40.0%
CAGAGCTTATAAACGGAAAG+TGG - chr7_3:39561494-39561513 Msa1103580:intron 40.0%
CTCATTAATGGCACTTACAG+AGG - chr7_3:39561655-39561674 Msa1103580:intron 40.0%
! TGGCACTTACAGAGGTTTTA+TGG - chr7_3:39561663-39561682 Msa1103580:intron 40.0%
TGCATATCCATCCAAATGGT+AGG + chr7_3:39561725-39561744 None:intergenic 40.0%
!!! GTAGCATGGATTTTGGAGTA+TGG - chr7_3:39561858-39561877 Msa1103580:intron 40.0%
!! GTGCTGACTGCATAAATTTG+TGG + chr7_3:39562054-39562073 None:intergenic 40.0%
GATGAACGTTGGATTGAGAA+CGG + chr7_3:39562177-39562196 None:intergenic 40.0%
AAATGGTCCAGTCTCATGTT+GGG + chr7_3:39562352-39562371 None:intergenic 40.0%
! CCAAATGAAGCCTTCTTTTG+AGG + chr7_3:39562439-39562458 None:intergenic 40.0%
CCTCAAAAGAAGGCTTCATT+TGG - chr7_3:39562436-39562455 Msa1103580:intron 40.0%
! GCAATGCTAAAGCGCTATAT+CGG + chr7_3:39562620-39562639 None:intergenic 40.0%
CTTCTTTGACCTGTCTCTTT+AGG - chr7_3:39562814-39562833 Msa1103580:intron 40.0%
TGTCTCTTTAGGTCTTTCCT+GGG - chr7_3:39562825-39562844 Msa1103580:intron 40.0%
!! GAACTTTTACCTTTGAAGGG+AGG + chr7_3:39563023-39563042 None:intergenic 40.0%
TCAATCGACACAAATCTCTC+TGG - chr7_3:39563290-39563309 Msa1103580:intron 40.0%
! GATGAGCATTGCCATTGAAT+AGG - chr7_3:39563858-39563877 Msa1103580:five_prime_UTR 40.0%
TCATCAGATCACATGGGGAT+GGG + chr7_3:39555378-39555397 None:intergenic 45.0%
GAGTGTCATCAGATCACATG+GGG + chr7_3:39555383-39555402 None:intergenic 45.0%
GTGAGTGTCATCAGATCACA+TGG + chr7_3:39555385-39555404 None:intergenic 45.0%
! CTGTTGTTTGACTCCAAGTG+GGG + chr7_3:39555682-39555701 None:intergenic 45.0%
! CCTGTTGTTTGACTCCAAGT+GGG + chr7_3:39555683-39555702 None:intergenic 45.0%
! ACCTGTTGTTTGACTCCAAG+TGG + chr7_3:39555684-39555703 None:intergenic 45.0%
! CTAAAGGTGTGTCTGGTGTA+CGG - chr7_3:39555821-39555840 Msa1103580:intron 45.0%
!! GTGTGTCAGAAGTGCTACAA+AGG + chr7_3:39556148-39556167 None:intergenic 45.0%
CTTTCCCCGTCAATTCAACT+TGG - chr7_3:39556482-39556501 Msa1103580:CDS 45.0%
! GAGACCAAGTTGAATTGACG+GGG + chr7_3:39556489-39556508 None:intergenic 45.0%
CAACTCCTTGACAGAACATG+AGG + chr7_3:39556554-39556573 None:intergenic 45.0%
CTCATGTTCTGTCAAGGAGT+TGG - chr7_3:39556552-39556571 Msa1103580:intron 45.0%
ATGTTCTGTCAAGGAGTTGG+CGG - chr7_3:39556555-39556574 Msa1103580:intron 45.0%
AGCAGTCTGACGCTTAAGTT+AGG - chr7_3:39556608-39556627 Msa1103580:intron 45.0%
GCAGTCTGACGCTTAAGTTA+GGG - chr7_3:39556609-39556628 Msa1103580:intron 45.0%
CTTCCGTTAGTGCTAGTGTT+AGG - chr7_3:39556746-39556765 Msa1103580:intron 45.0%
AGACTCTGCAAGTCTATCAC+AGG + chr7_3:39557160-39557179 None:intergenic 45.0%
TTTGGAGGGGTGGTATTGTT+GGG + chr7_3:39557208-39557227 None:intergenic 45.0%
!! TTTTGGAGGGGTGGTATTGT+TGG + chr7_3:39557209-39557228 None:intergenic 45.0%
!!! CAATGTTGATTTTGGAGGGG+TGG + chr7_3:39557218-39557237 None:intergenic 45.0%
ATCAGCTGAGAAAGCAGCTT+GGG + chr7_3:39557290-39557309 None:intergenic 45.0%
AATCAGCTGAGAAAGCAGCT+TGG + chr7_3:39557291-39557310 None:intergenic 45.0%
! CTGCTTTCTCAGCTGATTTC+TGG - chr7_3:39557293-39557312 Msa1103580:intron 45.0%
!! CAGCTGATTTCTGGTGTCAT+TGG - chr7_3:39557302-39557321 Msa1103580:intron 45.0%
CACAAGTACCCAGTACTGTT+TGG - chr7_3:39557365-39557384 Msa1103580:intron 45.0%
ACATAGGCCCAAACAGTACT+GGG + chr7_3:39557376-39557395 None:intergenic 45.0%
TACATAGGCCCAAACAGTAC+TGG + chr7_3:39557377-39557396 None:intergenic 45.0%
TACTGTTTGGGCCTATGTAC+AGG - chr7_3:39557378-39557397 Msa1103580:intron 45.0%
TAGACACCTGTCTATGAGGA+TGG - chr7_3:39557607-39557626 Msa1103580:intron 45.0%
GAAGCCTTCGAAATAAAGGC+AGG + chr7_3:39557654-39557673 None:intergenic 45.0%
CGACCTAAGAAGAGCCTATT+GGG - chr7_3:39557720-39557739 Msa1103580:CDS 45.0%
AGAAAGTTAGATGGACCCGT+AGG + chr7_3:39557746-39557765 None:intergenic 45.0%
CTTGAGTACTATTGGGCGTA+GGG - chr7_3:39557848-39557867 Msa1103580:CDS 45.0%
GCTAATTGCATTTCCGGGAA+TGG - chr7_3:39557894-39557913 Msa1103580:CDS 45.0%
! TTTTGTGCTCTTGTGTCAGC+AGG - chr7_3:39557983-39558002 Msa1103580:intron 45.0%
GGGATCAATAAGCAGTTTCC+TGG - chr7_3:39558426-39558445 Msa1103580:CDS 45.0%
GCAGGAATGGTGTACAACAT+AGG - chr7_3:39558610-39558629 Msa1103580:intron 45.0%
ACCAATTGTCCAATTCCAGC+CGG - chr7_3:39558663-39558682 Msa1103580:intron 45.0%
! CTCTCTGGAAGTTTAGCGAA+GGG + chr7_3:39558746-39558765 None:intergenic 45.0%
CTAAACTTCCAGAGAGCTTC+TGG - chr7_3:39558750-39558769 Msa1103580:intron 45.0%
GCAGTTATTCCTGTTCCGTT+TGG - chr7_3:39558804-39558823 Msa1103580:intron 45.0%
TCACCATCTGGCAATCCAAA+CGG + chr7_3:39558822-39558841 None:intergenic 45.0%
! GCCGCTTTCTGTGACTTATT+TGG - chr7_3:39558890-39558909 Msa1103580:intron 45.0%
TGTGAAACAGGATCTCAGGA+AGG - chr7_3:39558961-39558980 Msa1103580:intron 45.0%
CTCAGGAAGGATGTGGAAAA+TGG - chr7_3:39558974-39558993 Msa1103580:intron 45.0%
!! GTGGAAAATGGCGTTGATCT+TGG - chr7_3:39558986-39559005 Msa1103580:intron 45.0%
GTTGATCTTGGAATTCCCGA+TGG - chr7_3:39558998-39559017 Msa1103580:intron 45.0%
CCCGATGGTGTTCTTATCAA+TGG - chr7_3:39559013-39559032 Msa1103580:intron 45.0%
AGTGTGTCATCGTAGCGATA+AGG + chr7_3:39559046-39559065 None:intergenic 45.0%
GATGACACACTTGTCCCAAA+TGG - chr7_3:39559055-39559074 Msa1103580:intron 45.0%
GATGAAGCTCTGCATGTCAT+TGG - chr7_3:39559265-39559284 Msa1103580:intron 45.0%
TATGCCAGTCTAGACTGTTC+AGG - chr7_3:39559521-39559540 Msa1103580:intron 45.0%
AGTTCCTGAACAGTCTAGAC+TGG + chr7_3:39559528-39559547 None:intergenic 45.0%
GTCAGAGACGTAAGCACAAT+TGG + chr7_3:39559807-39559826 None:intergenic 45.0%
TAACCTTGTGTCGTATCGTG+GGG - chr7_3:39559913-39559932 Msa1103580:intron 45.0%
TGGATGATACTGGGAGATGT+GGG + chr7_3:39559949-39559968 None:intergenic 45.0%
TTGGATGATACTGGGAGATG+TGG + chr7_3:39559950-39559969 None:intergenic 45.0%
GCTTGGCACAGACATTTCTT+TGG + chr7_3:39559969-39559988 None:intergenic 45.0%
AGAAACCATTTCGTAGCAGC+AGG - chr7_3:39560087-39560106 Msa1103580:intron 45.0%
TTAGCCGGTAGATACACAAG+AGG - chr7_3:39560209-39560228 Msa1103580:intron 45.0%
TTACTTCTAGTGGAGACCGA+AGG - chr7_3:39560858-39560877 Msa1103580:CDS 45.0%
CTGGACTGTGTATGATCCTT+CGG + chr7_3:39560877-39560896 None:intergenic 45.0%
!! CCATGTTCGTGTAGTTTTGC+TGG + chr7_3:39560896-39560915 None:intergenic 45.0%
CCAGCAAAACTACACGAACA+TGG - chr7_3:39560893-39560912 Msa1103580:CDS 45.0%
ACTACATTGTTGCCAGTCCT+CGG - chr7_3:39560979-39560998 Msa1103580:intron 45.0%
!! TCATCATGGACTAGAGCTAC+TGG - chr7_3:39561011-39561030 Msa1103580:intron 45.0%
TGATCAGAAAGGCTAGGAAG+AGG + chr7_3:39561083-39561102 None:intergenic 45.0%
TATAGGTGGAATGTGTCTGC+CGG - chr7_3:39561388-39561407 Msa1103580:intron 45.0%
CCGCAAGGTTCCTTCAAATA+TGG - chr7_3:39561427-39561446 Msa1103580:intron 45.0%
AAGTGGCGAACTACCCTTAA+TGG - chr7_3:39561511-39561530 Msa1103580:intron 45.0%
TAATGTTGCGCAAGCGTCAA+AGG + chr7_3:39561562-39561581 None:intergenic 45.0%
GGCCTGTTCATCCATCTATT+TGG + chr7_3:39561616-39561635 None:intergenic 45.0%
ATCCATCCAAATGGTAGGAC+TGG + chr7_3:39561720-39561739 None:intergenic 45.0%
TTACAATAAGTGGGACGGTG+TGG - chr7_3:39561901-39561920 Msa1103580:intron 45.0%
TTATGCAGTCAGCACATCAG+TGG - chr7_3:39562059-39562078 Msa1103580:intron 45.0%
AGTGGCTGTTGGAATGAGAT+CGG - chr7_3:39562077-39562096 Msa1103580:intron 45.0%
CTGTTGGAATGAGATCGGAT+GGG - chr7_3:39562082-39562101 Msa1103580:intron 45.0%
TGTTGGAATGAGATCGGATG+GGG - chr7_3:39562083-39562102 Msa1103580:intron 45.0%
! GACGGTCCAAATTTGAAGCT+CGG + chr7_3:39562155-39562174 None:intergenic 45.0%
AACGTTGGATTGAGAACGGA+CGG + chr7_3:39562173-39562192 None:intergenic 45.0%
GAAATGGTCCAGTCTCATGT+TGG + chr7_3:39562353-39562372 None:intergenic 45.0%
CAGGAAAGACCTAAAGAGAC+AGG + chr7_3:39562826-39562845 None:intergenic 45.0%
CTGTCTCTTTAGGTCTTTCC+TGG - chr7_3:39562824-39562843 Msa1103580:intron 45.0%
GTCTCTTTAGGTCTTTCCTG+GGG - chr7_3:39562826-39562845 Msa1103580:intron 45.0%
CTCTTGACAATGCTGGCATT+TGG - chr7_3:39562870-39562889 Msa1103580:intron 45.0%
ATACCAGGAGTTGAGGTTCT+CGG + chr7_3:39562906-39562925 None:intergenic 45.0%
AACCTCAACTCCTGGTATCT+AGG - chr7_3:39562908-39562927 Msa1103580:intron 45.0%
AGATTCTTGGCCTAGATACC+AGG + chr7_3:39562921-39562940 None:intergenic 45.0%
! ACCTTTGAAGGGAGGAAAGT+AGG + chr7_3:39563015-39563034 None:intergenic 45.0%
! TGTGCCTGTTTCTCATATGC+AGG - chr7_3:39563643-39563662 Msa1103580:intron 45.0%
! GTGCCTGTTTCTCATATGCA+GGG - chr7_3:39563644-39563663 Msa1103580:intron 45.0%
GAGGTGATCCTACAGAAAAC+TGG + chr7_3:39563686-39563705 None:intergenic 45.0%
GTCATCAGATCACATGGGGA+TGG + chr7_3:39555379-39555398 None:intergenic 50.0%
AGAGAGACAGAGCTGTGTTG+AGG + chr7_3:39555433-39555452 None:intergenic 50.0%
CGATGCCATCACTGTCTTCT+TGG - chr7_3:39555562-39555581 Msa1103580:three_prime_UTR 50.0%
CCCACTTGGAGTCAAACAAC+AGG - chr7_3:39555680-39555699 Msa1103580:CDS 50.0%
AGACACAACACGGACAACAC+TGG + chr7_3:39556213-39556232 None:intergenic 50.0%
AGTGTTGTCCGTGTTGTGTC+TGG - chr7_3:39556212-39556231 Msa1103580:intron 50.0%
GTCAAGGAGTTGGCGGTATT+TGG - chr7_3:39556562-39556581 Msa1103580:intron 50.0%
!! AGTTGGCGGTATTTGGCTCT+TGG - chr7_3:39556569-39556588 Msa1103580:intron 50.0%
GTCAAAGACTTGGGCACACT+TGG - chr7_3:39557017-39557036 Msa1103580:intron 50.0%
TGCATCCGAAATTGTCAGCC+AGG + chr7_3:39557572-39557591 None:intergenic 50.0%
CTTAGGTCGCACAAGCTGAT+TGG + chr7_3:39557709-39557728 None:intergenic 50.0%
GCGACCTAAGAAGAGCCTAT+TGG - chr7_3:39557719-39557738 Msa1103580:CDS 50.0%
AGGCCCAATAGGCTCTTCTT+AGG + chr7_3:39557726-39557745 None:intergenic 50.0%
AGAAGAGCCTATTGGGCCTA+CGG - chr7_3:39557727-39557746 Msa1103580:CDS 50.0%
!! AATGGAGCACAAAGGGTACC+AGG - chr7_3:39557803-39557822 Msa1103580:CDS 50.0%
GCTTGAGTACTATTGGGCGT+AGG - chr7_3:39557847-39557866 Msa1103580:CDS 50.0%
TGCTCTTGTGTCAGCAGGTA+TGG - chr7_3:39557988-39558007 Msa1103580:intron 50.0%
AGGAAAGACACCTGGCAAGA+CGG - chr7_3:39558630-39558649 Msa1103580:intron 50.0%
CTCGTATGTCCAATTCCAGC+CGG + chr7_3:39558685-39558704 None:intergenic 50.0%
! GCTCTCTGGAAGTTTAGCGA+AGG + chr7_3:39558747-39558766 None:intergenic 50.0%
AACTTCCAGAGAGCTTCTGG+AGG - chr7_3:39558753-39558772 Msa1103580:intron 50.0%
CATATCCTCCAGAAGCTCTC+TGG + chr7_3:39558761-39558780 None:intergenic 50.0%
! CAGAGAGCTTCTGGAGGATA+TGG - chr7_3:39558759-39558778 Msa1103580:intron 50.0%
! AGAGCTTCTGGAGGATATGG+AGG - chr7_3:39558762-39558781 Msa1103580:intron 50.0%
TCTGGCAATCCAAACGGAAC+AGG + chr7_3:39558816-39558835 None:intergenic 50.0%
GTTCCGTTTGGATTGCCAGA+TGG - chr7_3:39558816-39558835 Msa1103580:intron 50.0%
CTGGTACACCAAGAGTCACA+AGG - chr7_3:39558863-39558882 Msa1103580:intron 50.0%
ACAGGATCTCAGGAAGGATG+TGG - chr7_3:39558967-39558986 Msa1103580:intron 50.0%
ATGATACTGGGAGATGTGGG+GGG + chr7_3:39559946-39559965 None:intergenic 50.0%
GATGATACTGGGAGATGTGG+GGG + chr7_3:39559947-39559966 None:intergenic 50.0%
GGATGATACTGGGAGATGTG+GGG + chr7_3:39559948-39559967 None:intergenic 50.0%
AACCATTTCGTAGCAGCAGG+AGG - chr7_3:39560090-39560109 Msa1103580:intron 50.0%
ACCCAACATGAACAACTCCC+AGG - chr7_3:39560502-39560521 Msa1103580:CDS 50.0%
CCCTGGGAGTTGTTCATGTT+GGG + chr7_3:39560506-39560525 None:intergenic 50.0%
CCCAACATGAACAACTCCCA+GGG - chr7_3:39560503-39560522 Msa1103580:CDS 50.0%
ACCCTGGGAGTTGTTCATGT+TGG + chr7_3:39560507-39560526 None:intergenic 50.0%
!! GGTTCTGGTTTCATCACCCT+GGG + chr7_3:39560522-39560541 None:intergenic 50.0%
!! TGGTTCTGGTTTCATCACCC+TGG + chr7_3:39560523-39560542 None:intergenic 50.0%
CGCATACGGGTTCACAATGT+CGG - chr7_3:39560795-39560814 Msa1103580:intron 50.0%
AATTCTCAGGGTCCTGCTTC+AGG - chr7_3:39561056-39561075 Msa1103580:intron 50.0%
TTGAAGGAACCTTGCGGGTT+TGG + chr7_3:39561424-39561443 None:intergenic 50.0%
!! AGCGTCAAAGGTGTTGAAGG+TGG + chr7_3:39561550-39561569 None:intergenic 50.0%
!! GCAAGCGTCAAAGGTGTTGA+AGG + chr7_3:39561553-39561572 None:intergenic 50.0%
CAAATGGTAGGACTGGACAG+TGG + chr7_3:39561713-39561732 None:intergenic 50.0%
CACTGTCCAGTCCTACCATT+TGG - chr7_3:39561711-39561730 Msa1103580:intron 50.0%
GTCCAGTCCTACCATTTGGA+TGG - chr7_3:39561715-39561734 Msa1103580:intron 50.0%
GCTGTTGGAATGAGATCGGA+TGG - chr7_3:39562081-39562100 Msa1103580:intron 50.0%
GTCAGCACATCGATGAACGT+TGG + chr7_3:39562188-39562207 None:intergenic 50.0%
!! TCATCGATGTGCTGACTGCA+TGG - chr7_3:39562192-39562211 Msa1103580:intron 50.0%
!! CATCGATGTGCTGACTGCAT+GGG - chr7_3:39562193-39562212 Msa1103580:intron 50.0%
GTCTTGACCCAACATGAGAC+TGG - chr7_3:39562342-39562361 Msa1103580:intron 50.0%
TTTAGGTCTTTCCTGGGGCT+TGG - chr7_3:39562831-39562850 Msa1103580:intron 50.0%
GCCTACTTTCCTCCCTTCAA+AGG - chr7_3:39563011-39563030 Msa1103580:intron 50.0%
GGTCCCTGCATATGAGAAAC+AGG + chr7_3:39563650-39563669 None:intergenic 50.0%
ATCACATGGGGATGGGAGAG+AGG + chr7_3:39555371-39555390 None:intergenic 55.0%
GACAGAGCTGTGTTGAGGAC+TGG + chr7_3:39555428-39555447 None:intergenic 55.0%
TACACCACAGCATCCCCACT+TGG - chr7_3:39555666-39555685 Msa1103580:CDS 55.0%
GTCCGTGTTGTGTCTGGTGT+CGG - chr7_3:39556218-39556237 Msa1103580:intron 55.0%
CACCGACACCAGACACAACA+CGG + chr7_3:39556223-39556242 None:intergenic 55.0%
CCTCCCTCGACACTTCCTAT+AGG + chr7_3:39556856-39556875 None:intergenic 55.0%
!! CCTATAGGAAGTGTCGAGGG+AGG - chr7_3:39556853-39556872 Msa1103580:intron 55.0%
AATGGGGGACAAGCCTGTGT+AGG + chr7_3:39557436-39557455 None:intergenic 55.0%
! CGCATACACCCGATTTTCCG+TGG + chr7_3:39557477-39557496 None:intergenic 55.0%
GAAGAGCCTATTGGGCCTAC+GGG - chr7_3:39557728-39557747 Msa1103580:CDS 55.0%
TCCGGGAATGGCATCCAGTA+CGG - chr7_3:39557906-39557925 Msa1103580:CDS 55.0%
TCCGTACTGGATGCCATTCC+CGG + chr7_3:39557910-39557929 None:intergenic 55.0%
ACCTGGCAAGACGGAGTTTC+AGG - chr7_3:39558639-39558658 Msa1103580:intron 55.0%
TCCTGAAACTCCGTCTTGCC+AGG + chr7_3:39558643-39558662 None:intergenic 55.0%
GCCGGCTGGAATTGGACAAT+TGG + chr7_3:39558667-39558686 None:intergenic 55.0%
ATTGTCCAATTCCAGCCGGC+TGG - chr7_3:39558667-39558686 Msa1103580:intron 55.0%
CAATTCCAGCCGGCTGGAAT+TGG + chr7_3:39558673-39558692 None:intergenic 55.0%
CAATTCCAGCCGGCTGGAAT+TGG - chr7_3:39558673-39558692 Msa1103580:intron 55.0%
TATGTCCAATTCCAGCCGGC+TGG + chr7_3:39558681-39558700 None:intergenic 55.0%
CGGCAAGACCTTGTGACTCT+TGG + chr7_3:39558874-39558893 None:intergenic 55.0%
TGCCTCCTGCTGCTACGAAA+TGG + chr7_3:39560095-39560114 None:intergenic 55.0%
CTAGGAAGAGGACCTGAAGC+AGG + chr7_3:39561071-39561090 None:intergenic 55.0%
GTCAGCACATCAGTGGCTGT+TGG - chr7_3:39562066-39562085 Msa1103580:intron 55.0%
AAAATGGCTGTCCAAGCCCC+AGG + chr7_3:39562845-39562864 None:intergenic 55.0%
AGTTGAGGTTCTCGGCACGA+AGG + chr7_3:39562898-39562917 None:intergenic 55.0%
GGCCTAGATACCAGGAGTTG+AGG + chr7_3:39562913-39562932 None:intergenic 55.0%
GGATGGGAGAGAGGAGAGGA+GGG + chr7_3:39555362-39555381 None:intergenic 60.0%
ATGGGGATGGGAGAGAGGAG+AGG + chr7_3:39555366-39555385 None:intergenic 60.0%
GACTCCAAGTGGGGATGCTG+TGG + chr7_3:39555673-39555692 None:intergenic 60.0%
!! AGGAAGTGTCGAGGGAGGCA+AGG - chr7_3:39556858-39556877 Msa1103580:intron 60.0%
!! GGAAGTGTCGAGGGAGGCAA+GGG - chr7_3:39556859-39556878 Msa1103580:intron 60.0%
TGTCGAGGGAGGCAAGGGTT+GGG - chr7_3:39556864-39556883 Msa1103580:intron 60.0%
GCGGTGAGTGGAGCATGCTT+CGG - chr7_3:39556892-39556911 Msa1103580:intron 60.0%
CGGTGAGTGGAGCATGCTTC+GGG - chr7_3:39556893-39556912 Msa1103580:intron 60.0%
GGTGAGTGGAGCATGCTTCG+GGG - chr7_3:39556894-39556913 Msa1103580:intron 60.0%
GATGGACCCGTAGGCCCAAT+AGG + chr7_3:39557737-39557756 None:intergenic 60.0%
GCTCCCCACGATACGACACA+AGG + chr7_3:39559919-39559938 None:intergenic 60.0%
GTGCCGAGAACCTCAACTCC+TGG - chr7_3:39562900-39562919 Msa1103580:intron 60.0%
GGGATGGGAGAGAGGAGAGG+AGG + chr7_3:39555363-39555382 None:intergenic 65.0%
GTGTCGAGGGAGGCAAGGGT+TGG - chr7_3:39556863-39556882 Msa1103580:intron 65.0%
CGGGTTTGGACGTGCAGCAC+CGG + chr7_3:39561410-39561429 None:intergenic 65.0%
GCTGCACGTCCAAACCCGCA+AGG - chr7_3:39561412-39561431 Msa1103580:intron 65.0%
AGGCAAGGGTTGGGCGAGCG+CGG - chr7_3:39556873-39556892 Msa1103580:intron 70.0%
GGACGGTGTGGCTCGCTGCA+CGG - chr7_3:39561913-39561932 Msa1103580:intron 70.0%
TGTGGCTCGCTGCACGGCAC+AGG - chr7_3:39561919-39561938 Msa1103580:intron 70.0%
GGTTGGGCGAGCGCGGTGAG+TGG - chr7_3:39556880-39556899 Msa1103580:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 39555347 39564038 39555347 ID=Msa1103580;Name=Msa1103580
chr7_3 mRNA 39555347 39564038 39555347 ID=Msa1103580-mRNA-1;Parent=Msa1103580;Name=Msa1103580-mRNA-1;_AED=0.07;_eAED=0.07;_QI=217|0.87|0.77|1|0.62|0.55|9|244|574
chr7_3 exon 39555347 39555720 39555347 ID=Msa1103580-mRNA-1:exon:8053;Parent=Msa1103580-mRNA-1
chr7_3 exon 39556353 39556549 39556353 ID=Msa1103580-mRNA-1:exon:8052;Parent=Msa1103580-mRNA-1
chr7_3 exon 39557511 39557523 39557511 ID=Msa1103580-mRNA-1:exon:8051;Parent=Msa1103580-mRNA-1
chr7_3 exon 39557627 39557992 39557627 ID=Msa1103580-mRNA-1:exon:8050;Parent=Msa1103580-mRNA-1
chr7_3 exon 39558241 39558601 39558241 ID=Msa1103580-mRNA-1:exon:8049;Parent=Msa1103580-mRNA-1
chr7_3 exon 39560276 39560414 39560276 ID=Msa1103580-mRNA-1:exon:8048;Parent=Msa1103580-mRNA-1
chr7_3 exon 39560501 39560771 39560501 ID=Msa1103580-mRNA-1:exon:8047;Parent=Msa1103580-mRNA-1
chr7_3 exon 39560856 39560965 39560856 ID=Msa1103580-mRNA-1:exon:8046;Parent=Msa1103580-mRNA-1
chr7_3 exon 39563684 39564038 39563684 ID=Msa1103580-mRNA-1:exon:8045;Parent=Msa1103580-mRNA-1
chr7_3 five_prime_UTR 39563822 39564038 39563822 ID=Msa1103580-mRNA-1:five_prime_utr;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39563684 39563821 39563684 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39560856 39560965 39560856 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39560501 39560771 39560501 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39560276 39560414 39560276 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39558241 39558601 39558241 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39557627 39557992 39557627 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39557511 39557523 39557511 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39556353 39556549 39556353 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 CDS 39555591 39555720 39555591 ID=Msa1103580-mRNA-1:cds;Parent=Msa1103580-mRNA-1
chr7_3 three_prime_UTR 39555347 39555590 39555347 ID=Msa1103580-mRNA-1:three_prime_utr;Parent=Msa1103580-mRNA-1
Gene Sequence

>Msa1103580

ATGCCATCACTGTCTTCTTGGTTCTTCCCAACACTTCTATGCTGCTTCTTAGATACTGCTTTTTCTGGCGACCCTTTTGTTTACTACGACTGGACTGTATCATACACCACAGCATCCCCACTTGGAGTCAAACAACAGGTAATTGGGATCAATAAGCAGTTTCCTGGACCAATTTTAAATGTCACAACAAACTGGAATGTGGTTGTCAATGTGAAGAACGATCTTGATGAACCCTTACTTCTGCATTGGAATGGTGTACAACATAGGAAAGACACCTGGCAAGACGGAGTTTCAGGAACCAATTGTCCAATTCCAGCCGGCTGGAATTGGACATACGAGTTTCAAGTTAAAGATCAGATAGGGAGTTTTTTCTATTTCCCTTCGCTAAACTTCCAGAGAGCTTCTGGAGGATATGGAGGAATTATCATAAACAATAGAGCAGTTATTCCTGTTCCGTTTGGATTGCCAGATGGTGATGTTATATTATTTCTCAGTGACTGGTACACCAAGAGTCACAAGGATCTCAGGAAGGATGTGGAAAATGGCGTTGATCTTGGAATTCCCGATGGTGTTCTTATCAATGGATTCGGTCCTTATCGCTACGATGACACACTTGTCCCAAATGGCATAACTTACCAAATAATAAATGTGGAACCTGGGAAAACATATCGCATACGGGTTCACAATGTCGGTATCTCAACAAGCTTGAATTTCAGGATTCAAAATCACAACTTACTTCTAGTGGAGACCGAAGGATCATACACAGTCCAGCAAAACTACACGAACATGGATATTCATGTTGGTCAGTCATATTCATTCTTGGTTACGATGGATCAAAATGCGAGCACTGATTACTACATTGTTGCCAGTCCTCGGTTTGTTAATTCATCATGGACTAGAGCTACTGGAGTTGCCATTTTGCACTACGCTAATTCTCAGGGTCCTGCTTCAGGTCCTCTTCCTAGCCTTTCTGATCAAGATAATCCTTCTTTCTCTATAAATCAAGCAAGATCAGTAAGGTGGAATGTGTCTGCCGGTGCTGCACGTCCAAACCCGCAAGGTTCCTTCAAATATGGGGACATTACTGTCACTGATGTATATGTTATTGTGAATAGACCTCCAGAGCTTATAAACGGAAAGTGGCGAACTACCCTTAATGGTATATCGTATTTACCACCTTCAACACCTTTGACGCTTGCGCAACATTATAAAATTCTCGGGGTGTACAAGCTTGATTTTCCAAATAGATGGATGAACAGGCCTTCTAAAGTTGATGTCTCTCTCATTAATGGCACTTACAGAGGTTTTATGGAAATAATCTTTCAAAATAATGACACCACTGTCCAGTCCTACCATTTGGATGGATATGCATTCTTTGTTGTTGGCATGGATTTTGGAGTCTTTCCTGGGGCTTGGACAGCCATTTTAGTATCTCTTGACAATGCTGGCATTTGGAACCTTCGTGCCGAGAACCTCAACTCCTGGTATCTAGGCCAAGAATCTTATCTTCAAGTTGTAAACACAGAGAATGATAGTAATGAAAATTCTTTGCCTGATAATGCAATATACTGTGGCCTACTTTCCTCCCTTCAAAGGGACCAATCTCACAAATACCAGTTTTCTGTAGGATCACCTCTAAGCAGTAATTCTAGAATGATATTATTCATGTTATTATTCCTAGCTCTAACTGAAAGTTTGTATGGCATGTGTAGTATTAAACATTAA
Protein sequence

>Msa1103580

MPSLSSWFFPTLLCCFLDTAFSGDPFVYYDWTVSYTTASPLGVKQQVIGINKQFPGPILNVTTNWNVVVNVKNDLDEPLLLHWNGVQHRKDTWQDGVSGTNCPIPAGWNWTYEFQVKDQIGSFFYFPSLNFQRASGGYGGIIINNRAVIPVPFGLPDGDVILFLSDWYTKSHKDLRKDVENGVDLGIPDGVLINGFGPYRYDDTLVPNGITYQIINVEPGKTYRIRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSYSFLVTMDQNASTDYYIVASPRFVNSSWTRATGVAILHYANSQGPASGPLPSLSDQDNPSFSINQARSVRWNVSAGAARPNPQGSFKYGDITVTDVYVIVNRPPELINGKWRTTLNGISYLPPSTPLTLAQHYKILGVYKLDFPNRWMNRPSKVDVSLINGTYRGFMEIIFQNNDTTVQSYHLDGYAFFVVGMDFGVFPGAWTAILVSLDNAGIWNLRAENLNSWYLGQESYLQVVNTENDSNENSLPDNAIYCGLLSSLQRDQSHKYQFSVGSPLSSNSRMILFMLLFLALTESLYGMCSIKH*