Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716750 | XP_003612031.3 | 95.312 | 768 | 35 | 1 | 1 | 768 | 1 | 767 | 0.0 | 1473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716750 | sp|O23225|PUB5_ARATH | 36.856 | 757 | 399 | 17 | 17 | 756 | 12 | 706 | 8.71e-138 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716750 | G7KEW9 | 95.312 | 768 | 35 | 1 | 1 | 768 | 1 | 767 | 0.0 | 1473 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003030 | Msa0716750 | -0.835839 | 1.327904e-56 | -8.615850e-47 |
| Msa0051200 | Msa0716750 | 0.842856 | 2.002688e-58 | -8.615850e-47 |
| Msa0051460 | Msa0716750 | 0.850542 | 1.587183e-60 | -8.615850e-47 |
| Msa0058270 | Msa0716750 | 0.802206 | 6.261478e-49 | -8.615850e-47 |
| Msa0063000 | Msa0716750 | 0.822300 | 2.550383e-53 | -8.615850e-47 |
| Msa0077930 | Msa0716750 | 0.813535 | 2.436427e-51 | -8.615850e-47 |
| Msa0093440 | Msa0716750 | 0.827946 | 1.181505e-54 | -8.615850e-47 |
| Msa0101840 | Msa0716750 | 0.818145 | 2.283908e-52 | -8.615850e-47 |
| Msa0113800 | Msa0716750 | 0.840125 | 1.049624e-57 | -8.615850e-47 |
| Msa0606310 | Msa0716750 | 0.827149 | 1.834623e-54 | -8.615850e-47 |
| Msa0607180 | Msa0716750 | 0.810567 | 1.081107e-50 | -8.615850e-47 |
| Msa0622600 | Msa0716750 | 0.811371 | 7.240292e-51 | -8.615850e-47 |
| Msa0641020 | Msa0716750 | 0.848903 | 4.556582e-60 | -8.615850e-47 |
| Msa0641030 | Msa0716750 | 0.827105 | 1.879728e-54 | -8.615850e-47 |
| Msa0654020 | Msa0716750 | 0.805336 | 1.402457e-49 | -8.615850e-47 |
| Msa0658570 | Msa0716750 | 0.801359 | 9.344296e-49 | -8.615850e-47 |
| Msa0660870 | Msa0716750 | 0.988651 | 7.337693e-175 | -8.615850e-47 |
| Msa0679560 | Msa0716750 | 0.826314 | 2.903131e-54 | -8.615850e-47 |
| Msa0705860 | Msa0716750 | 0.820865 | 5.471737e-53 | -8.615850e-47 |
| Msa0716750 | Msa0757980 | 0.955329 | 3.894864e-113 | -8.615850e-47 |
| Msa0716750 | Msa0799280 | 0.989624 | 6.276211e-179 | -8.615850e-47 |
| Msa0716750 | Msa0818110 | 0.800791 | 1.221105e-48 | -8.615850e-47 |
| Msa0716750 | Msa0837500 | 0.962548 | 5.223196e-121 | -8.615850e-47 |
| Msa0716750 | Msa0839230 | 0.856553 | 2.976869e-62 | -8.615850e-47 |
| Msa0716750 | Msa0874630 | 0.820806 | 5.647096e-53 | -8.615850e-47 |
| Msa0716750 | Msa0881160 | 0.812228 | 4.710556e-51 | -8.615850e-47 |
| Msa0716750 | Msa0883350 | 0.809717 | 1.648610e-50 | -8.615850e-47 |
| Msa0716750 | Msa0883450 | 0.802585 | 5.232803e-49 | -8.615850e-47 |
| Msa0716750 | Msa0883660 | 0.800888 | 1.166683e-48 | -8.615850e-47 |
| Msa0716750 | Msa0884890 | 0.811456 | 6.936741e-51 | -8.615850e-47 |
| Msa0716750 | Msa0886330 | -0.805542 | 1.269503e-49 | -8.615850e-47 |
| Msa0716750 | Msa0912210 | 0.820712 | 5.933773e-53 | -8.615850e-47 |
| Msa0716750 | Msa0912470 | 0.817825 | 2.696986e-52 | -8.615850e-47 |
| Msa0716750 | Msa0961460 | 0.804021 | 2.638388e-49 | -8.615850e-47 |
| Msa0716750 | Msa0976290 | 0.811780 | 5.899056e-51 | -8.615850e-47 |
| Msa0716750 | Msa1008340 | 0.817492 | 3.207265e-52 | -8.615850e-47 |
| Msa0716750 | Msa1077960 | 0.812429 | 4.259727e-51 | -8.615850e-47 |
| Msa0716750 | Msa1112370 | 0.813282 | 2.769775e-51 | -8.615850e-47 |
| Msa0716750 | Msa1130350 | 0.817591 | 3.046578e-52 | -8.615850e-47 |
| Msa0716750 | Msa1139240 | 0.814752 | 1.312514e-51 | -8.615850e-47 |
| Msa0716750 | Msa1171730 | 0.805325 | 1.409864e-49 | -8.615850e-47 |
| Msa0716750 | Msa1184550 | 0.814211 | 1.729452e-51 | -8.615850e-47 |
| Msa0716750 | Msa1209560 | 0.832619 | 8.525618e-56 | -8.615850e-47 |
| Msa0716750 | Msa1225730 | -0.814256 | 1.690521e-51 | -8.615850e-47 |
| Msa0716750 | Msa1246040 | 0.826850 | 2.162769e-54 | -8.615850e-47 |
| Msa0716750 | Msa1264860 | -0.832857 | 7.440106e-56 | -8.615850e-47 |
| Msa0716750 | Msa1298910 | 0.807565 | 4.749575e-50 | -8.615850e-47 |
| Msa0716750 | Msa1330530 | 0.811553 | 6.609394e-51 | -8.615850e-47 |
| Msa0716750 | Msa1376890 | 0.801386 | 9.228474e-49 | -8.615850e-47 |
| Msa0716750 | Msa1377070 | 0.844473 | 7.397537e-59 | -8.615850e-47 |
| Msa0716750 | Msa1427810 | 0.808027 | 3.788766e-50 | -8.615850e-47 |
| Msa0716750 | Msa1441200 | 0.813630 | 2.322271e-51 | -8.615850e-47 |
| Msa0716750 | Msa1445250 | 0.843668 | 1.216088e-58 | -8.615850e-47 |
| Msa0716750 | Msa1460030 | 0.838635 | 2.557512e-57 | -8.615850e-47 |
| Msa0716750 | Msa1463650 | -0.833217 | 6.053068e-56 | -8.615850e-47 |
| Msa0143920 | Msa0716750 | 0.845770 | 3.300197e-59 | -8.615850e-47 |
| Msa0146910 | Msa0716750 | -0.834681 | 2.604396e-56 | -8.615850e-47 |
| Msa0170460 | Msa0716750 | 0.844229 | 8.603637e-59 | -8.615850e-47 |
| Msa0201390 | Msa0716750 | 0.803987 | 2.681137e-49 | -8.615850e-47 |
| Msa0370800 | Msa0716750 | 0.804639 | 1.961436e-49 | -8.615850e-47 |
| Msa0403580 | Msa0716750 | 0.803641 | 3.163211e-49 | -8.615850e-47 |
| Msa0409450 | Msa0716750 | 0.815830 | 7.561740e-52 | -8.615850e-47 |
| Msa0418960 | Msa0716750 | 0.850022 | 2.221647e-60 | -8.615850e-47 |
| Msa0438050 | Msa0716750 | 0.848347 | 6.496769e-60 | -8.615850e-47 |
| Msa0440040 | Msa0716750 | 0.845219 | 4.654615e-59 | -8.615850e-47 |
| Msa0444290 | Msa0716750 | 0.825803 | 3.840135e-54 | -8.615850e-47 |
| Msa0457370 | Msa0716750 | 0.800218 | 1.597842e-48 | -8.615850e-47 |
| Msa0464710 | Msa0716750 | 0.859990 | 2.821889e-63 | -8.615850e-47 |
| Msa0467740 | Msa0716750 | -0.836126 | 1.123246e-56 | -8.615850e-47 |
| Msa0243940 | Msa0716750 | 0.820049 | 8.422522e-53 | -8.615850e-47 |
| Msa0342070 | Msa0716750 | 0.823458 | 1.370434e-53 | -8.615850e-47 |
| Msa0350000 | Msa0716750 | 0.803507 | 3.372255e-49 | -8.615850e-47 |
| Msa0492740 | Msa0716750 | 0.814458 | 1.525139e-51 | -8.615850e-47 |
| Msa0492880 | Msa0716750 | 0.809084 | 2.253115e-50 | -8.615850e-47 |
| Msa0514130 | Msa0716750 | -0.838985 | 2.076725e-57 | -8.615850e-47 |
| Msa0544930 | Msa0716750 | 0.816876 | 4.411870e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716750 | MtrunA17_Chr5g0404311 | 95.312 | 768 | 35 | 1 | 1 | 768 | 1 | 767 | 0.0 | 1473 |
| Msa0716750 | MtrunA17_Chr8g0373031 | 56.522 | 759 | 316 | 6 | 1 | 756 | 1 | 748 | 0.0 | 844 |
| Msa0716750 | MtrunA17_Chr8g0377151 | 31.198 | 718 | 447 | 13 | 19 | 713 | 19 | 712 | 8.89e-102 | 330 |
| Msa0716750 | MtrunA17_Chr3g0122721 | 30.769 | 767 | 483 | 16 | 10 | 754 | 9 | 749 | 1.44e-99 | 325 |
| Msa0716750 | MtrunA17_Chr1g0155261 | 41.627 | 209 | 121 | 1 | 19 | 226 | 16 | 224 | 1.37e-38 | 143 |
| Msa0716750 | MtrunA17_Chr1g0183781 | 28.257 | 499 | 281 | 17 | 271 | 713 | 239 | 716 | 2.93e-30 | 127 |
| Msa0716750 | MtrunA17_Chr7g0237931 | 26.196 | 439 | 250 | 14 | 274 | 709 | 238 | 605 | 1.32e-27 | 118 |
| Msa0716750 | MtrunA17_Chr7g0275081 | 37.857 | 140 | 85 | 1 | 225 | 362 | 28 | 167 | 4.78e-27 | 115 |
| Msa0716750 | MtrunA17_Chr4g0044411 | 49.412 | 85 | 43 | 0 | 264 | 348 | 264 | 348 | 9.12e-24 | 107 |
| Msa0716750 | MtrunA17_Chr7g0234671 | 24.176 | 455 | 249 | 14 | 242 | 662 | 54 | 446 | 8.30e-23 | 102 |
| Msa0716750 | MtrunA17_Chr2g0284461 | 21.510 | 437 | 288 | 10 | 274 | 710 | 293 | 674 | 3.49e-22 | 102 |
| Msa0716750 | MtrunA17_Chr1g0199321 | 53.333 | 75 | 35 | 0 | 274 | 348 | 248 | 322 | 3.53e-22 | 101 |
| Msa0716750 | MtrunA17_Chr4g0031431 | 24.847 | 326 | 207 | 9 | 29 | 348 | 37 | 330 | 1.11e-21 | 100 |
| Msa0716750 | MtrunA17_Chr3g0106931 | 48.889 | 90 | 45 | 1 | 266 | 354 | 225 | 314 | 2.32e-21 | 99.8 |
| Msa0716750 | MtrunA17_Chr1g0189811 | 45.455 | 77 | 42 | 0 | 274 | 350 | 64 | 140 | 1.42e-20 | 95.5 |
| Msa0716750 | MtrunA17_Chr7g0248251 | 37.903 | 124 | 64 | 2 | 253 | 367 | 258 | 377 | 4.14e-20 | 95.5 |
| Msa0716750 | MtrunA17_Chr4g0013091 | 24.070 | 457 | 270 | 15 | 266 | 710 | 306 | 697 | 1.83e-19 | 93.6 |
| Msa0716750 | MtrunA17_Chr7g0261371 | 47.436 | 78 | 41 | 0 | 271 | 348 | 239 | 316 | 2.02e-19 | 93.6 |
| Msa0716750 | MtrunA17_Chr7g0261371 | 29.655 | 290 | 162 | 12 | 451 | 713 | 516 | 790 | 5.87e-12 | 69.3 |
| Msa0716750 | MtrunA17_Chr5g0437411 | 48.649 | 74 | 38 | 0 | 274 | 347 | 294 | 367 | 1.89e-18 | 90.1 |
| Msa0716750 | MtrunA17_Chr5g0413681 | 43.902 | 82 | 46 | 0 | 275 | 356 | 282 | 363 | 2.22e-17 | 86.7 |
| Msa0716750 | MtrunA17_Chr4g0059201 | 43.243 | 74 | 42 | 0 | 274 | 347 | 320 | 393 | 2.82e-16 | 83.2 |
| Msa0716750 | MtrunA17_Chr1g0198984 | 50.794 | 63 | 31 | 0 | 286 | 348 | 1 | 63 | 3.65e-16 | 75.1 |
| Msa0716750 | MtrunA17_Chr3g0117851 | 42.500 | 80 | 46 | 0 | 274 | 353 | 276 | 355 | 1.21e-15 | 81.3 |
| Msa0716750 | MtrunA17_Chr4g0044631 | 40.000 | 100 | 55 | 3 | 274 | 369 | 15 | 113 | 1.43e-15 | 79.7 |
| Msa0716750 | MtrunA17_Chr1g0177261 | 41.509 | 106 | 48 | 6 | 265 | 359 | 1 | 103 | 5.10e-14 | 75.1 |
| Msa0716750 | MtrunA17_Chr3g0110121 | 38.372 | 86 | 49 | 2 | 269 | 350 | 32 | 117 | 5.38e-14 | 75.1 |
| Msa0716750 | MtrunA17_Chr6g0449461 | 28.866 | 291 | 186 | 10 | 446 | 723 | 10 | 292 | 7.47e-14 | 73.6 |
| Msa0716750 | MtrunA17_Chr5g0420471 | 38.095 | 84 | 48 | 2 | 271 | 350 | 23 | 106 | 9.19e-14 | 74.3 |
| Msa0716750 | MtrunA17_Chr5g0434171 | 39.286 | 84 | 47 | 2 | 271 | 350 | 33 | 116 | 1.58e-13 | 73.6 |
| Msa0716750 | MtrunA17_Chr6g0479261 | 38.095 | 84 | 48 | 2 | 271 | 350 | 23 | 106 | 1.72e-13 | 73.6 |
| Msa0716750 | MtrunA17_Chr1g0177281 | 41.509 | 106 | 48 | 6 | 265 | 359 | 1 | 103 | 2.01e-13 | 73.2 |
| Msa0716750 | MtrunA17_Chr1g0177271 | 45.349 | 86 | 37 | 4 | 265 | 343 | 1 | 83 | 4.11e-13 | 72.4 |
| Msa0716750 | MtrunA17_Chr4g0048811 | 47.761 | 67 | 34 | 1 | 274 | 339 | 6 | 72 | 7.28e-13 | 70.5 |
| Msa0716750 | MtrunA17_Chr8g0390311 | 34.615 | 104 | 66 | 2 | 246 | 348 | 369 | 471 | 1.16e-12 | 72.0 |
| Msa0716750 | MtrunA17_Chr5g0429231 | 25.532 | 282 | 195 | 6 | 440 | 712 | 40 | 315 | 1.39e-12 | 70.1 |
| Msa0716750 | MtrunA17_Chr2g0290151 | 28.743 | 167 | 112 | 5 | 550 | 713 | 290 | 452 | 5.17e-12 | 68.9 |
| Msa0716750 | MtrunA17_Chr1g0177301 | 42.045 | 88 | 45 | 4 | 269 | 350 | 2 | 89 | 7.16e-12 | 68.2 |
| Msa0716750 | MtrunA17_Chr5g0435041 | 24.528 | 212 | 114 | 3 | 546 | 712 | 89 | 299 | 1.10e-11 | 67.4 |
| Msa0716750 | MtrunA17_Chr7g0267501 | 41.573 | 89 | 45 | 4 | 269 | 350 | 4 | 92 | 2.77e-11 | 66.2 |
| Msa0716750 | MtrunA17_Chr3g0129811 | 39.130 | 69 | 42 | 0 | 271 | 339 | 81 | 149 | 3.80e-11 | 66.2 |
| Msa0716750 | MtrunA17_Chr2g0280671 | 44.615 | 65 | 36 | 0 | 275 | 339 | 17 | 81 | 7.02e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716750 | AT4G36550.1 | 36.856 | 757 | 399 | 17 | 17 | 756 | 12 | 706 | 8.85e-139 | 426 |
| Msa0716750 | AT1G24330.1 | 33.102 | 719 | 430 | 15 | 19 | 713 | 17 | 708 | 4.62e-113 | 361 |
| Msa0716750 | AT1G24330.2 | 33.102 | 719 | 430 | 15 | 19 | 713 | 17 | 708 | 4.62e-113 | 361 |
| Msa0716750 | AT1G67530.2 | 32.664 | 747 | 460 | 16 | 19 | 749 | 17 | 736 | 3.50e-110 | 353 |
| Msa0716750 | AT1G67530.1 | 32.664 | 747 | 460 | 16 | 19 | 749 | 17 | 736 | 3.50e-110 | 353 |
| Msa0716750 | AT1G67530.4 | 32.664 | 747 | 460 | 16 | 19 | 749 | 17 | 736 | 3.50e-110 | 353 |
| Msa0716750 | AT1G27910.1 | 30.590 | 729 | 433 | 15 | 19 | 713 | 17 | 706 | 4.98e-91 | 302 |
| Msa0716750 | AT1G67530.3 | 34.990 | 503 | 300 | 10 | 19 | 510 | 17 | 503 | 1.62e-85 | 281 |
| Msa0716750 | AT5G67340.1 | 25.427 | 468 | 307 | 12 | 274 | 710 | 241 | 697 | 3.27e-34 | 140 |
| Msa0716750 | AT5G67340.2 | 25.427 | 468 | 307 | 12 | 274 | 710 | 241 | 697 | 3.27e-34 | 140 |
| Msa0716750 | AT3G46510.1 | 26.807 | 332 | 210 | 7 | 23 | 350 | 31 | 333 | 2.24e-25 | 112 |
| Msa0716750 | AT3G07360.1 | 53.333 | 75 | 35 | 0 | 271 | 345 | 72 | 146 | 6.53e-25 | 109 |
| Msa0716750 | AT5G42340.1 | 26.061 | 330 | 197 | 9 | 27 | 349 | 77 | 366 | 5.71e-24 | 108 |
| Msa0716750 | AT2G28830.1 | 48.276 | 87 | 45 | 0 | 262 | 348 | 173 | 259 | 1.74e-22 | 102 |
| Msa0716750 | AT2G23140.1 | 46.591 | 88 | 47 | 0 | 267 | 354 | 227 | 314 | 4.45e-22 | 102 |
| Msa0716750 | AT2G23140.1 | 24.900 | 249 | 163 | 6 | 466 | 713 | 597 | 822 | 1.23e-12 | 72.0 |
| Msa0716750 | AT2G23140.2 | 46.591 | 88 | 47 | 0 | 267 | 354 | 224 | 311 | 4.71e-22 | 102 |
| Msa0716750 | AT2G23140.2 | 24.900 | 249 | 163 | 6 | 466 | 713 | 594 | 819 | 1.23e-12 | 72.0 |
| Msa0716750 | AT2G23140.4 | 46.591 | 88 | 47 | 0 | 267 | 354 | 224 | 311 | 4.71e-22 | 102 |
| Msa0716750 | AT2G23140.4 | 24.900 | 249 | 163 | 6 | 466 | 713 | 594 | 819 | 1.23e-12 | 72.0 |
| Msa0716750 | AT2G23140.3 | 46.591 | 88 | 47 | 0 | 267 | 354 | 35 | 122 | 4.90e-22 | 101 |
| Msa0716750 | AT2G23140.3 | 24.900 | 249 | 163 | 6 | 466 | 713 | 405 | 630 | 8.30e-13 | 72.4 |
| Msa0716750 | AT2G23140.5 | 46.591 | 88 | 47 | 0 | 267 | 354 | 35 | 122 | 4.90e-22 | 101 |
| Msa0716750 | AT2G23140.5 | 24.900 | 249 | 163 | 6 | 466 | 713 | 405 | 630 | 8.30e-13 | 72.4 |
| Msa0716750 | AT1G23030.1 | 25.291 | 344 | 234 | 8 | 259 | 584 | 227 | 565 | 5.20e-22 | 101 |
| Msa0716750 | AT3G54850.1 | 52.000 | 75 | 36 | 0 | 274 | 348 | 249 | 323 | 1.66e-21 | 100 |
| Msa0716750 | AT1G71020.2 | 43.000 | 100 | 53 | 1 | 249 | 348 | 75 | 170 | 7.58e-21 | 97.1 |
| Msa0716750 | AT1G71020.1 | 43.000 | 100 | 53 | 1 | 249 | 348 | 223 | 318 | 1.96e-20 | 96.7 |
| Msa0716750 | AT3G54790.2 | 38.372 | 86 | 53 | 0 | 271 | 356 | 200 | 285 | 1.34e-17 | 87.8 |
| Msa0716750 | AT3G54790.3 | 38.372 | 86 | 53 | 0 | 271 | 356 | 236 | 321 | 1.78e-17 | 87.8 |
| Msa0716750 | AT3G54790.1 | 38.372 | 86 | 53 | 0 | 271 | 356 | 236 | 321 | 1.78e-17 | 87.8 |
| Msa0716750 | AT1G29340.1 | 46.053 | 76 | 41 | 0 | 271 | 346 | 303 | 378 | 4.32e-16 | 83.2 |
| Msa0716750 | AT5G01830.1 | 44.444 | 72 | 40 | 0 | 274 | 345 | 275 | 346 | 6.67e-16 | 82.4 |
| Msa0716750 | AT5G18340.1 | 31.757 | 148 | 88 | 2 | 223 | 358 | 12 | 158 | 9.88e-16 | 80.9 |
| Msa0716750 | AT1G49780.1 | 46.914 | 81 | 39 | 2 | 274 | 350 | 15 | 95 | 1.58e-15 | 80.1 |
| Msa0716750 | AT5G18320.1 | 46.575 | 73 | 38 | 1 | 271 | 343 | 70 | 141 | 8.28e-15 | 78.2 |
| Msa0716750 | AT3G19380.1 | 43.902 | 82 | 41 | 3 | 274 | 350 | 15 | 96 | 4.88e-14 | 75.5 |
| Msa0716750 | AT1G66160.1 | 39.130 | 92 | 52 | 2 | 263 | 350 | 23 | 114 | 7.27e-14 | 75.1 |
| Msa0716750 | AT5G37490.1 | 42.045 | 88 | 46 | 2 | 267 | 350 | 26 | 112 | 1.14e-13 | 74.3 |
| Msa0716750 | AT2G35930.1 | 45.122 | 82 | 40 | 3 | 274 | 350 | 13 | 94 | 9.58e-13 | 71.2 |
| Msa0716750 | AT3G52450.1 | 43.902 | 82 | 41 | 3 | 274 | 350 | 8 | 89 | 1.37e-12 | 70.9 |
| Msa0716750 | AT1G60190.1 | 40.244 | 82 | 49 | 0 | 275 | 356 | 280 | 361 | 1.57e-12 | 71.6 |
| Msa0716750 | AT1G10560.1 | 34.906 | 106 | 68 | 1 | 248 | 352 | 262 | 367 | 1.69e-12 | 71.6 |
| Msa0716750 | AT1G01680.1 | 40.244 | 82 | 49 | 0 | 262 | 343 | 222 | 303 | 2.61e-12 | 68.9 |
| Msa0716750 | AT5G18330.1 | 38.571 | 70 | 42 | 1 | 271 | 340 | 63 | 131 | 7.60e-12 | 68.9 |
| Msa0716750 | AT3G61390.4 | 36.842 | 76 | 48 | 0 | 264 | 339 | 269 | 344 | 7.96e-12 | 68.2 |
| Msa0716750 | AT3G61390.2 | 36.842 | 76 | 48 | 0 | 264 | 339 | 344 | 419 | 1.60e-11 | 67.8 |
| Msa0716750 | AT3G49810.1 | 46.970 | 66 | 35 | 0 | 274 | 339 | 65 | 130 | 2.28e-11 | 67.4 |
| Msa0716750 | AT1G56040.1 | 38.961 | 77 | 47 | 0 | 262 | 338 | 342 | 418 | 3.00e-11 | 66.6 |
| Msa0716750 | AT5G57035.1 | 43.939 | 66 | 37 | 0 | 274 | 339 | 709 | 774 | 5.93e-11 | 66.6 |
Find 165 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAATACCCTCTCCTTTC+AGG | 0.129941 | 5_1:-10222447 | Msa0716750:intron |
| ATACATCTGCTGCTTAATTT+TGG | 0.151569 | 5_1:-10218938 | Msa0716750:three_prime_UTR |
| TGCATTGGATGCTGCAATTT+TGG | 0.187482 | 5_1:+10219825 | None:intergenic |
| GGATTATCTTAAGTTGATTT+TGG | 0.208826 | 5_1:-10219461 | Msa0716750:CDS |
| AAGTCCTTCATGACAATATT+TGG | 0.222378 | 5_1:+10220923 | None:intergenic |
| ATAACTTCCCAAACTCTTAA+TGG | 0.232924 | 5_1:+10220808 | None:intergenic |
| GCCATAATGGAAGAACTTTC+TGG | 0.238374 | 5_1:-10219865 | Msa0716750:CDS |
| TTGGAAGTTGCTTGCATATT+TGG | 0.240940 | 5_1:-10223206 | Msa0716750:five_prime_UTR |
| TTTCAAGCTCATGAGATTCT+TGG | 0.241484 | 5_1:+10223361 | None:intergenic |
| ACAAAGCTTAATTCCCATTC+AGG | 0.250995 | 5_1:-10221747 | Msa0716750:CDS |
| GTTCAATGAAATTTGTATAT+TGG | 0.252298 | 5_1:+10223320 | None:intergenic |
| AATCACCTCCATTAAGAGTT+TGG | 0.258899 | 5_1:-10220816 | Msa0716750:CDS |
| CCAATAGCACTTGATTAGTT+TGG | 0.266982 | 5_1:-10223225 | Msa0716750:five_prime_UTR |
| TCCAGAAAGTTCTTCCATTA+TGG | 0.272030 | 5_1:+10219864 | None:intergenic |
| AGATCGTTTCTCGATTAAAA+TGG | 0.277574 | 5_1:+10221372 | None:intergenic |
| CCAAACTAATCAAGTGCTAT+TGG | 0.279050 | 5_1:+10223225 | None:intergenic |
| TGAGTATGCTACATTTGTTC+TGG | 0.287071 | 5_1:-10221530 | Msa0716750:CDS |
| CAATAGTAACGTGTAATTCT+AGG | 0.289232 | 5_1:-10223152 | Msa0716750:intron |
| AAGAATAAACAAAATAAAAT+AGG | 0.289390 | 5_1:+10218762 | None:intergenic |
| GATCCTGTTATCATTGCTTC+TGG | 0.293374 | 5_1:-10221043 | Msa0716750:CDS |
| ACCTGAAAGGAGAGGGTATT+TGG | 0.293706 | 5_1:+10222446 | None:intergenic |
| TTCTTCAATAGTAGTCTAAT+TGG | 0.304543 | 5_1:-10223180 | Msa0716750:five_prime_UTR |
| TAAGAGCCAGTTTGGATTGA+TGG | 0.313296 | 5_1:-10219091 | Msa0716750:three_prime_UTR |
| TGTGAATGTGTGTGATATAT+TGG | 0.316428 | 5_1:-10219030 | Msa0716750:three_prime_UTR |
| TACATCAACCTTGAGGATAT+TGG | 0.317123 | 5_1:+10221067 | None:intergenic |
| CAACATGTCACTTGGATCAT+TGG | 0.319176 | 5_1:-10220753 | Msa0716750:CDS |
| GAACTGTTGTTGGTAATAAT+TGG | 0.328521 | 5_1:+10219307 | None:intergenic |
| ATGCTTGATAAGAGCCAGTT+TGG | 0.336886 | 5_1:-10219099 | Msa0716750:three_prime_UTR |
| ATCACCTCCATTAAGAGTTT+GGG | 0.353633 | 5_1:-10220815 | Msa0716750:CDS |
| CTCAACTTCATGATCTTCAA+TGG | 0.371229 | 5_1:-10220589 | Msa0716750:CDS |
| CACTATTGGTTCTCATTAAG+AGG | 0.380327 | 5_1:+10222489 | None:intergenic |
| CTTCTTGATTCAGAAGTGAT+AGG | 0.387240 | 5_1:-10219898 | Msa0716750:CDS |
| AATCCTAGTTTCTTCAGAAA+TGG | 0.387275 | 5_1:+10219235 | None:intergenic |
| ACTTATGCATCCCTTTGTTT+CGG | 0.390748 | 5_1:+10219576 | None:intergenic |
| AGGAGAAGTACTTGCCATAA+TGG | 0.393561 | 5_1:-10219878 | Msa0716750:CDS |
| TTCCGACAGAAGCTGAGTTC+CGG | 0.397671 | 5_1:+10220415 | None:intergenic |
| GACTGGAACCATACCCTGAA+TGG | 0.398503 | 5_1:+10221733 | None:intergenic |
| CTTAATTCCCATTCAGGGTA+TGG | 0.404422 | 5_1:-10221741 | Msa0716750:CDS |
| TCACAGAATGGAAATGATAA+AGG | 0.407952 | 5_1:-10219406 | Msa0716750:CDS |
| TTATTCTTATAGCATGTTGT+TGG | 0.411310 | 5_1:+10219758 | None:intergenic |
| AACAAAATAAAATAGGAAAC+TGG | 0.414555 | 5_1:+10218769 | None:intergenic |
| TAGCAGATATGATTTATATA+TGG | 0.425285 | 5_1:-10219067 | Msa0716750:three_prime_UTR |
| CTAGAGTTATCCCTTGCAAT+TGG | 0.428602 | 5_1:+10221205 | None:intergenic |
| ACTCCAGAAGCAATGATAAC+AGG | 0.429341 | 5_1:+10221040 | None:intergenic |
| TTTAGTAATATTCTCAAGAA+AGG | 0.431108 | 5_1:+10219002 | None:intergenic |
| TGCTATCCATCAATCCAAAC+TGG | 0.436944 | 5_1:+10219085 | None:intergenic |
| TGTTGGCAGGAAGAGGGAAA+AGG | 0.439214 | 5_1:+10218801 | None:intergenic |
| TGAGATGTTATATTCAGTCT+TGG | 0.439810 | 5_1:+10221400 | None:intergenic |
| TCCAGTCATGTTGGCTGTAG+AGG | 0.442914 | 5_1:-10221717 | Msa0716750:intron |
| TGAAGATACGTTCATAAAGT+TGG | 0.444353 | 5_1:-10219926 | Msa0716750:CDS |
| TATGTGATGGAAGGGTTTCA+AGG | 0.449063 | 5_1:+10223522 | None:intergenic |
| CATAGAATTGATGAAAATAG+TGG | 0.450941 | 5_1:-10222191 | Msa0716750:CDS |
| ACCTCTACAGCCAACATGAC+TGG | 0.454239 | 5_1:+10221716 | None:intergenic |
| AAGAAGTTTCTAGATAAAGT+TGG | 0.465531 | 5_1:-10221346 | Msa0716750:CDS |
| GGACGTGCTTCCTCTATGTC+TGG | 0.467090 | 5_1:+10222148 | None:intergenic |
| TCAACTTCATGATCTTCAAT+GGG | 0.469345 | 5_1:-10220588 | Msa0716750:CDS |
| TCTGTATGTCTACCTGGATC+AGG | 0.469637 | 5_1:+10220863 | None:intergenic |
| CATCAGATTCAAGTCATGAT+TGG | 0.470843 | 5_1:+10220694 | None:intergenic |
| ATTACTTCTTCAACATTGCT+CGG | 0.472225 | 5_1:-10222065 | Msa0716750:CDS |
| GTTGGCAGGAAGAGGGAAAA+GGG | 0.474180 | 5_1:+10218802 | None:intergenic |
| TATTACTTTCAGGCTGTGAC+AGG | 0.476168 | 5_1:-10221815 | Msa0716750:intron |
| TTGTATAGTGGTGGTGGTGG+TGG | 0.476960 | 5_1:-10218888 | Msa0716750:three_prime_UTR |
| ATTGGACACTTGTATTCCTC+AGG | 0.479427 | 5_1:+10221085 | None:intergenic |
| ACTGAATATAACATCTCAAA+AGG | 0.479795 | 5_1:-10221395 | Msa0716750:CDS |
| GCACGTCCAAGATGTTCATC+AGG | 0.480753 | 5_1:-10222133 | Msa0716750:CDS |
| CATGGCCATGAAAATTGAAA+AGG | 0.486010 | 5_1:+10223445 | None:intergenic |
| TCTATTCCTGATGAACATCT+TGG | 0.488308 | 5_1:+10222127 | None:intergenic |
| TCACCATTTCTGAAGAAACT+AGG | 0.488630 | 5_1:-10219238 | Msa0716750:CDS |
| GATTCTGCTGAAGAAGAGGC+TGG | 0.489454 | 5_1:-10221508 | Msa0716750:CDS |
| CTTCTTAGTAGTAAAATCAA+TGG | 0.490228 | 5_1:-10223276 | Msa0716750:five_prime_UTR |
| AAAGAATGTGGATAAGAAAG+TGG | 0.491198 | 5_1:-10221009 | Msa0716750:CDS |
| GACGTAAAAGCGCTGAGAGC+CGG | 0.495304 | 5_1:-10220434 | Msa0716750:CDS |
| AATTCTATTGCCGAAACAAA+GGG | 0.496586 | 5_1:-10219586 | Msa0716750:CDS |
| TACTTGATTCTGATAACAAA+GGG | 0.497678 | 5_1:-10219783 | Msa0716750:CDS |
| CTCTTAATGAGAACCAATAG+TGG | 0.499914 | 5_1:-10222488 | Msa0716750:exon |
| GGAATCTGTAGAACTGTTGT+TGG | 0.501183 | 5_1:+10219297 | None:intergenic |
| TCTAGTATGTTGGCAGGAAG+AGG | 0.501878 | 5_1:+10218794 | None:intergenic |
| ATGGAAGAACTTTCTGGAGA+TGG | 0.503922 | 5_1:-10219859 | Msa0716750:CDS |
| TTATGAACGTATCTTCACTT+AGG | 0.504024 | 5_1:+10219932 | None:intergenic |
| GAGCAATGCAAATGATCAGC+AGG | 0.504932 | 5_1:-10220456 | Msa0716750:CDS |
| TTTATTTATGTGTACCTGAA+AGG | 0.505342 | 5_1:+10222433 | None:intergenic |
| ATTGTATTGTATAGTGGTGG+TGG | 0.506458 | 5_1:-10218894 | Msa0716750:three_prime_UTR |
| TATCCTTGTGATACCATTGT+GGG | 0.506979 | 5_1:-10219137 | Msa0716750:three_prime_UTR |
| GGTGTCTCCATTCCTGATCC+AGG | 0.507047 | 5_1:-10220875 | Msa0716750:CDS |
| ACTGGAACCATACCCTGAAT+GGG | 0.507557 | 5_1:+10221734 | None:intergenic |
| GTAAGAGAATTGCTTCATCA+AGG | 0.507831 | 5_1:-10221478 | Msa0716750:CDS |
| CGGAATTTGTGAACAACTGC+AGG | 0.508751 | 5_1:-10220397 | Msa0716750:intron |
| TGGTTAAAGTATGTGATGGA+AGG | 0.511760 | 5_1:+10223513 | None:intergenic |
| GGTTAAAGTATGTGATGGAA+GGG | 0.511997 | 5_1:+10223514 | None:intergenic |
| ATGTACATGTTCTCAAAATG+TGG | 0.513586 | 5_1:-10219482 | Msa0716750:CDS |
| CAAAGCTTAATTCCCATTCA+GGG | 0.514357 | 5_1:-10221746 | Msa0716750:CDS |
| GACTCCAAATATTGTCATGA+AGG | 0.514758 | 5_1:-10220927 | Msa0716750:CDS |
| GCATGGAAACTTAATGTTGG+TGG | 0.522527 | 5_1:-10221266 | Msa0716750:CDS |
| GATAAGAAAGTGGATTAATG+AGG | 0.523558 | 5_1:-10220999 | Msa0716750:CDS |
| ACAGTAGGCACTGTAACAGT+AGG | 0.525492 | 5_1:-10218857 | Msa0716750:three_prime_UTR |
| GAGAATATTTCCAGACATAG+AGG | 0.529000 | 5_1:-10222158 | Msa0716750:CDS |
| CTGGTCTCTAGTATGTTGGC+AGG | 0.529952 | 5_1:+10218788 | None:intergenic |
| GAAGTTGCTTGCATATTTGG+TGG | 0.533912 | 5_1:-10223203 | Msa0716750:five_prime_UTR |
| TTTGGAGTCAATGTCATATG+AGG | 0.534604 | 5_1:+10220941 | None:intergenic |
| AAATCTTCTGTATGTCTACC+TGG | 0.534943 | 5_1:+10220857 | None:intergenic |
| AACATTTGTGATACTGAAGA+AGG | 0.537856 | 5_1:-10219613 | Msa0716750:CDS |
| TGGACAAACTTCACTGTTGT+AGG | 0.541725 | 5_1:+10219723 | None:intergenic |
| GACATGTTGGTAAGATCCAT+TGG | 0.542509 | 5_1:+10220767 | None:intergenic |
| GCATGAACTGTATGCTTGTG+AGG | 0.545176 | 5_1:+10220644 | None:intergenic |
| GTGGTGGTTATGTTTACAGT+AGG | 0.546072 | 5_1:-10218872 | Msa0716750:three_prime_UTR |
| GGAATGCAGCAAACTTTACC+TGG | 0.549952 | 5_1:-10222044 | Msa0716750:intron |
| CAATGATCTGAACTTGCCAA+TGG | 0.550541 | 5_1:-10220783 | Msa0716750:CDS |
| TTACTTGATTCTGATAACAA+AGG | 0.553043 | 5_1:-10219784 | Msa0716750:CDS |
| AGGTTCAACCTCAGATTCCA+TGG | 0.554010 | 5_1:-10221458 | Msa0716750:CDS |
| CATGGAAACTTAATGTTGGT+GGG | 0.555579 | 5_1:-10221265 | Msa0716750:CDS |
| GATTTCTTCGTCGAGAATCA+CGG | 0.555802 | 5_1:+10221182 | None:intergenic |
| TTTAACTTCAAAGTCGTCCA+TGG | 0.559348 | 5_1:+10221441 | None:intergenic |
| GATCTTACCAACATGTCACT+TGG | 0.560709 | 5_1:-10220761 | Msa0716750:CDS |
| TTCTGTGAGATATAGAAAAG+AGG | 0.564373 | 5_1:+10219421 | None:intergenic |
| GAAACTGGTCTCTAGTATGT+TGG | 0.564897 | 5_1:+10218784 | None:intergenic |
| GGGTATGGTTCCAGTCATGT+TGG | 0.567915 | 5_1:-10221726 | Msa0716750:CDS |
| AAATTCTATTGCCGAAACAA+AGG | 0.571416 | 5_1:-10219587 | Msa0716750:CDS |
| CAATGATCCAAGTGACATGT+TGG | 0.572790 | 5_1:+10220754 | None:intergenic |
| TCTGGATTCTGCTGAAGAAG+AGG | 0.573607 | 5_1:-10221512 | Msa0716750:CDS |
| TTATTGGTTAAAGTATGTGA+TGG | 0.574426 | 5_1:+10223509 | None:intergenic |
| ATTGTAATTGTATTGTATAG+TGG | 0.575715 | 5_1:-10218900 | Msa0716750:three_prime_UTR |
| TAAGACAGAAGTGAGTGCAT+TGG | 0.577623 | 5_1:+10219810 | None:intergenic |
| TAGTGAAAATAAAGCAAGCA+TGG | 0.578421 | 5_1:+10223427 | None:intergenic |
| ATGTCTACCTGGATCAGGAA+TGG | 0.578674 | 5_1:+10220868 | None:intergenic |
| AGCCGGAACTCAGCTTCTGT+CGG | 0.579942 | 5_1:-10220417 | Msa0716750:CDS |
| ATTGCTGAAATACTTGAGAG+TGG | 0.582850 | 5_1:-10219550 | Msa0716750:CDS |
| GGACACTTGTATTCCTCAGG+TGG | 0.587812 | 5_1:+10221088 | None:intergenic |
| GTATTGTATAGTGGTGGTGG+TGG | 0.590239 | 5_1:-10218891 | Msa0716750:three_prime_UTR |
| ACACACATTCACAAAGATTG+AGG | 0.593009 | 5_1:+10219040 | None:intergenic |
| CTAGTATGTTGGCAGGAAGA+GGG | 0.593142 | 5_1:+10218795 | None:intergenic |
| CAGTAGGCACTGTAACAGTA+GGG | 0.595779 | 5_1:-10218856 | Msa0716750:three_prime_UTR |
| CTGACACTGACAAAGTAGCT+TGG | 0.600806 | 5_1:+10220513 | None:intergenic |
| ATTCTGCTGAAGAAGAGGCT+GGG | 0.601067 | 5_1:-10221507 | Msa0716750:CDS |
| GAGTAACATATGAAAGAATG+TGG | 0.601967 | 5_1:-10221021 | Msa0716750:CDS |
| ATAAGAAAGTGGATTAATGA+GGG | 0.602588 | 5_1:-10220998 | Msa0716750:CDS |
| TATGTGTACCTGAAAGGAGA+GGG | 0.606017 | 5_1:+10222439 | None:intergenic |
| CAGTGAAGTTTGTCCACACA+TGG | 0.607997 | 5_1:-10219716 | Msa0716750:CDS |
| AATGTTGGTGGGAGAACACA+TGG | 0.609389 | 5_1:-10221254 | Msa0716750:CDS |
| GAATGGAAATGATAAAGGAA+AGG | 0.610121 | 5_1:-10219401 | Msa0716750:CDS |
| GATGAATCAGTCGGATAGAG+TGG | 0.610590 | 5_1:-10221113 | Msa0716750:CDS |
| AATGTGTTGAGAATGAAGAT+AGG | 0.612607 | 5_1:-10219339 | Msa0716750:CDS |
| TCCTTGTGATACCATTGTGG+GGG | 0.616090 | 5_1:-10219135 | Msa0716750:three_prime_UTR |
| CAAAATATGAAGCAATTCCA+CGG | 0.616213 | 5_1:+10219372 | None:intergenic |
| TAGAGAAGAACCAATTGCAA+GGG | 0.618427 | 5_1:-10221215 | Msa0716750:CDS |
| CATTGAAGATCATGAAGTTG+AGG | 0.619411 | 5_1:+10220590 | None:intergenic |
| TAAAACTGAGATGAATCAGT+CGG | 0.620886 | 5_1:-10221122 | Msa0716750:CDS |
| GGTCTTAACTTGTGACACAT+CGG | 0.622908 | 5_1:+10220715 | None:intergenic |
| AAAGCATGGAAACTTAATGT+TGG | 0.624675 | 5_1:-10221269 | Msa0716750:CDS |
| GTAGAGAAGAACCAATTGCA+AGG | 0.624828 | 5_1:-10221216 | Msa0716750:CDS |
| AAAGTCGTCCATGGAATCTG+AGG | 0.626252 | 5_1:+10221450 | None:intergenic |
| TTATGTGTACCTGAAAGGAG+AGG | 0.628672 | 5_1:+10222438 | None:intergenic |
| ACAAGTGTCCAATATCCTCA+AGG | 0.631386 | 5_1:-10221075 | Msa0716750:CDS |
| ATATCCTTGTGATACCATTG+TGG | 0.633299 | 5_1:-10219138 | Msa0716750:three_prime_UTR |
| GGATAGAGTGGCACCACCTG+AGG | 0.636060 | 5_1:-10221101 | Msa0716750:CDS |
| GTAATTGTATTGTATAGTGG+TGG | 0.647763 | 5_1:-10218897 | Msa0716750:three_prime_UTR |
| ACTTCCCAAACTCTTAATGG+AGG | 0.650645 | 5_1:+10220811 | None:intergenic |
| ATCCTTGTGATACCATTGTG+GGG | 0.650807 | 5_1:-10219136 | Msa0716750:three_prime_UTR |
| TAAAGGAAAGGAAAGTGCCG+TGG | 0.657866 | 5_1:-10219389 | Msa0716750:CDS |
| CACATGCATCAAAACCCAGA+AGG | 0.661406 | 5_1:-10219195 | Msa0716750:CDS |
| CCTTGTGATACCATTGTGGG+GGG | 0.667814 | 5_1:-10219134 | Msa0716750:three_prime_UTR |
| TGAAGGACTTGATATCAAAG+TGG | 0.687601 | 5_1:-10220910 | Msa0716750:CDS |
| AGGATCATACATCAACCTTG+AGG | 0.687795 | 5_1:+10221060 | None:intergenic |
| CAATTGACAGATACCATGTG+TGG | 0.700444 | 5_1:+10219703 | None:intergenic |
| GTTGGTAATAATTGGCTGAG+AGG | 0.708552 | 5_1:+10219315 | None:intergenic |
| ATTATGACTTGAGAATGCTG+AGG | 0.735899 | 5_1:+10219159 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATAAACAAAATAAAAT+AGG | + | chr5_1:10223427-10223446 | None:intergenic | 10.0% |
| !! | GAACAAAAGAAATAAAAAAA+AGG | + | chr5_1:10218806-10218825 | None:intergenic | 15.0% |
| !!! | GTTTCTATTATTTTATCTTT+AGG | - | chr5_1:10219082-10219101 | Msa0716750:three_prime_UTR | 15.0% |
| !!! | TTAATCAAAGTTGATAAATT+CGG | + | chr5_1:10219196-10219215 | None:intergenic | 15.0% |
| !! | ACGATACATAATATATATAA+TGG | - | chr5_1:10220304-10220323 | Msa0716750:intron | 15.0% |
| !!! | TTTGTTTTAATATTACTTTC+AGG | - | chr5_1:10220361-10220380 | Msa0716750:intron | 15.0% |
| !! | ACAATTGAAAATAGTTTATA+TGG | + | chr5_1:10221885-10221904 | None:intergenic | 15.0% |
| !! | TATAAATAATTAAGTTCCTA+AGG | - | chr5_1:10222021-10222040 | Msa0716750:intron | 15.0% |
| !!! | GAAAAAATAAGAGGTATTAT+TGG | + | chr5_1:10218696-10218715 | None:intergenic | 20.0% |
| !!! | ATTATCCTTTTCAATTTTCA+TGG | - | chr5_1:10218736-10218755 | Msa0716750:three_prime_UTR | 20.0% |
| !! | GTTCAATGAAATTTGTATAT+TGG | + | chr5_1:10218869-10218888 | None:intergenic | 20.0% |
| !! | ATCAACTTTGATTAATCAAA+TGG | - | chr5_1:10219201-10219220 | Msa0716750:CDS | 20.0% |
| !!! | TGTAACTTTTGTCAAAATTA+CGG | - | chr5_1:10219319-10219338 | Msa0716750:CDS | 20.0% |
| !!! | AATTTATTTTGGAATACTCT+TGG | + | chr5_1:10219568-10219587 | None:intergenic | 20.0% |
| !! | AACAAAATAATGAAATGCAA+TGG | + | chr5_1:10219781-10219800 | None:intergenic | 20.0% |
| !!! | TATTTTGTTCATCATATCAT+AGG | - | chr5_1:10219792-10219811 | Msa0716750:CDS | 20.0% |
| !!! | ATATAGTTTGTTAGTTAGAT+TGG | + | chr5_1:10219851-10219870 | None:intergenic | 20.0% |
| !! | TTACATAAACTCTTATAACT+TGG | - | chr5_1:10219908-10219927 | Msa0716750:CDS | 20.0% |
| !! | AATGGTTTATTTATACTAAC+AGG | - | chr5_1:10220322-10220341 | Msa0716750:intron | 20.0% |
| !! | TATATGTCCAAAAACAAAAA+AGG | - | chr5_1:10221217-10221236 | Msa0716750:CDS | 20.0% |
| !!! | ACTATTTTCAATTGTAAATG+TGG | - | chr5_1:10221890-10221909 | Msa0716750:intron | 20.0% |
| !! | AAATTTATAATACCAAAAGC+AGG | + | chr5_1:10222189-10222208 | None:intergenic | 20.0% |
| !!! | TGAAAAAAGGTAACAATTTT+GGG | + | chr5_1:10222512-10222531 | None:intergenic | 20.0% |
| !!! | TTGAAAAAAGGTAACAATTT+TGG | + | chr5_1:10222513-10222532 | None:intergenic | 20.0% |
| !! | TAGCAGATATGATTTATATA+TGG | - | chr5_1:10223119-10223138 | Msa0716750:intron | 20.0% |
| !! | TTTAGTAATATTCTCAAGAA+AGG | + | chr5_1:10223187-10223206 | None:intergenic | 20.0% |
| !! | ATTGTAATTGTATTGTATAG+TGG | - | chr5_1:10223286-10223305 | Msa0716750:five_prime_UTR | 20.0% |
| !! | AACAAAATAAAATAGGAAAC+TGG | + | chr5_1:10223420-10223439 | None:intergenic | 20.0% |
| !!! | GATATCTGTTTTTACAATTA+AGG | + | chr5_1:10223484-10223503 | None:intergenic | 20.0% |
| !! | TTATTGGTTAAAGTATGTGA+TGG | + | chr5_1:10218680-10218699 | None:intergenic | 25.0% |
| ! | TGTAGTCATGAAAAAATAAG+AGG | + | chr5_1:10218705-10218724 | None:intergenic | 25.0% |
| ! | CTTCTTAGTAGTAAAATCAA+TGG | - | chr5_1:10218910-10218929 | Msa0716750:three_prime_UTR | 25.0% |
| ! | TTCTTCAATAGTAGTCTAAT+TGG | - | chr5_1:10219006-10219025 | Msa0716750:three_prime_UTR | 25.0% |
| !!! | AATAGAAACTTTTGAGAGTA+AGG | + | chr5_1:10219071-10219090 | None:intergenic | 25.0% |
| ! | TAGTGAGTTTGACAAAATTT+AGG | - | chr5_1:10219266-10219285 | Msa0716750:CDS | 25.0% |
| !! | TGATAATTTGCCATATATCT+TGG | + | chr5_1:10219391-10219410 | None:intergenic | 25.0% |
| !! | AGAGAAGGACAAATTTATTT+TGG | + | chr5_1:10219579-10219598 | None:intergenic | 25.0% |
| ! | TTGTTCTTTCATTACAGTTA+AGG | - | chr5_1:10219607-10219626 | Msa0716750:CDS | 25.0% |
| ! | TTTATTTATGTGTACCTGAA+AGG | + | chr5_1:10219756-10219775 | None:intergenic | 25.0% |
| ! | CGGAATTTATGTTAATTAAC+AGG | - | chr5_1:10219956-10219975 | Msa0716750:intron | 25.0% |
| ! | CATAGAATTGATGAAAATAG+TGG | - | chr5_1:10219995-10220014 | Msa0716750:intron | 25.0% |
| ! | AAAAAAAAAAAAGACACACC+AGG | + | chr5_1:10220163-10220182 | None:intergenic | 25.0% |
| !!! | AGTTTGGATTAACTTGTTTA+TGG | + | chr5_1:10220590-10220609 | None:intergenic | 25.0% |
| ! | ACTGAATATAACATCTCAAA+AGG | - | chr5_1:10220791-10220810 | Msa0716750:CDS | 25.0% |
| !! | AAGAAGTTTCTAGATAAAGT+TGG | - | chr5_1:10220840-10220859 | Msa0716750:CDS | 25.0% |
| ! | ATGTATCTAATGAAAAAGCA+TGG | - | chr5_1:10220903-10220922 | Msa0716750:CDS | 25.0% |
| !!! | ATAAGAAAGTGGATTAATGA+GGG | - | chr5_1:10221188-10221207 | Msa0716750:CDS | 25.0% |
| !! | TACAGAAGATTTTATGTTGT+TGG | - | chr5_1:10221340-10221359 | Msa0716750:CDS | 25.0% |
| ! | ACCATACAAAGATCAAAATT+GGG | + | chr5_1:10221835-10221854 | None:intergenic | 25.0% |
| !! | TCTACAATTTCAGAAACTTT+TGG | + | chr5_1:10221976-10221995 | None:intergenic | 25.0% |
| !!! | AAGTTTCTGAAATTGTAGAA+AGG | - | chr5_1:10221977-10221996 | Msa0716750:intron | 25.0% |
| !!! | TGTGTGTAATTTTTCAGAAA+TGG | - | chr5_1:10222222-10222241 | Msa0716750:intron | 25.0% |
| !!! | GTAATTTTTCAGAAATGGTA+TGG | - | chr5_1:10222227-10222246 | Msa0716750:intron | 25.0% |
| ! | TTACTTGATTCTGATAACAA+AGG | - | chr5_1:10222402-10222421 | Msa0716750:intron | 25.0% |
| ! | TACTTGATTCTGATAACAAA+GGG | - | chr5_1:10222403-10222422 | Msa0716750:intron | 25.0% |
| ! | TTATTCTTATAGCATGTTGT+TGG | + | chr5_1:10222431-10222450 | None:intergenic | 25.0% |
| !!! | GGATTATCTTAAGTTGATTT+TGG | - | chr5_1:10222725-10222744 | Msa0716750:intron | 25.0% |
| !!! | TTTGATGATCTATTTTCTTC+AGG | + | chr5_1:10222924-10222943 | None:intergenic | 25.0% |
| TAGTGAAAATAAAGCAAGCA+TGG | + | chr5_1:10218762-10218781 | None:intergenic | 30.0% | |
| ! | GATTTTACTACTAAGAAGCA+AGG | + | chr5_1:10218908-10218927 | None:intergenic | 30.0% |
| CAATAGTAACGTGTAATTCT+AGG | - | chr5_1:10219034-10219053 | Msa0716750:three_prime_UTR | 30.0% | |
| TTCAAAGTTCAAACTGTGTT+TGG | - | chr5_1:10219105-10219124 | Msa0716750:three_prime_UTR | 30.0% | |
| !! | ATCAAAGTTGATAAATTCGG+AGG | + | chr5_1:10219193-10219212 | None:intergenic | 30.0% |
| ! | CAAATGGCTTACGATTTTAT+TGG | - | chr5_1:10219217-10219236 | Msa0716750:CDS | 30.0% |
| TTGTAGCTTCAACAAAATCA+TGG | + | chr5_1:10219297-10219316 | None:intergenic | 30.0% | |
| ! | AACTTTTGTCAAAATTACGG+TGG | - | chr5_1:10219322-10219341 | Msa0716750:CDS | 30.0% |
| CATATATCTTGGTACATGTT+TGG | + | chr5_1:10219380-10219399 | None:intergenic | 30.0% | |
| CAAACATGTACCAAGATATA+TGG | - | chr5_1:10219378-10219397 | Msa0716750:CDS | 30.0% | |
| AGAACAAAATCTACTAGAGA+AGG | + | chr5_1:10219594-10219613 | None:intergenic | 30.0% | |
| TATGTGAATGAACGACAAAT+CGG | + | chr5_1:10219885-10219904 | None:intergenic | 30.0% | |
| TAACTTGGATGTTAGTACTA+AGG | - | chr5_1:10219923-10219942 | Msa0716750:CDS | 30.0% | |
| AGTACTAAGGATTCTATTGA+CGG | - | chr5_1:10219936-10219955 | Msa0716750:CDS | 30.0% | |
| ATTACTTCTTCAACATTGCT+CGG | - | chr5_1:10220121-10220140 | Msa0716750:intron | 30.0% | |
| !!! | CTAATGACTTTTTCGCTTTT+TGG | + | chr5_1:10220418-10220437 | None:intergenic | 30.0% |
| AGAAAGGATAAAACTCAGTT+TGG | + | chr5_1:10220606-10220625 | None:intergenic | 30.0% | |
| TGAGATGTTATATTCAGTCT+TGG | + | chr5_1:10220789-10220808 | None:intergenic | 30.0% | |
| AGATCGTTTCTCGATTAAAA+TGG | + | chr5_1:10220817-10220836 | None:intergenic | 30.0% | |
| ! | TCAAGATTGTCTTCTTTTTC+GGG | + | chr5_1:10220875-10220894 | None:intergenic | 30.0% |
| ! | CTCAAGATTGTCTTCTTTTT+CGG | + | chr5_1:10220876-10220895 | None:intergenic | 30.0% |
| AAAGCATGGAAACTTAATGT+TGG | - | chr5_1:10220917-10220936 | Msa0716750:CDS | 30.0% | |
| TAAAACTGAGATGAATCAGT+CGG | - | chr5_1:10221064-10221083 | Msa0716750:CDS | 30.0% | |
| GAGTAACATATGAAAGAATG+TGG | - | chr5_1:10221165-10221184 | Msa0716750:CDS | 30.0% | |
| AAAGAATGTGGATAAGAAAG+TGG | - | chr5_1:10221177-10221196 | Msa0716750:CDS | 30.0% | |
| !! | GATAAGAAAGTGGATTAATG+AGG | - | chr5_1:10221187-10221206 | Msa0716750:CDS | 30.0% |
| !!! | GGTAGTTCCTTTTTTGTTTT+TGG | + | chr5_1:10221227-10221246 | None:intergenic | 30.0% |
| AAGTCCTTCATGACAATATT+TGG | + | chr5_1:10221266-10221285 | None:intergenic | 30.0% | |
| TCAAAGTGGTGCAAAAATAA+TGG | - | chr5_1:10221290-10221309 | Msa0716750:CDS | 30.0% | |
| ATAACTTCCCAAACTCTTAA+TGG | + | chr5_1:10221381-10221400 | None:intergenic | 30.0% | |
| TCAACTTCATGATCTTCAAT+GGG | - | chr5_1:10221598-10221617 | Msa0716750:intron | 30.0% | |
| CACCATACAAAGATCAAAAT+TGG | + | chr5_1:10221836-10221855 | None:intergenic | 30.0% | |
| ! | ACTTTTGGATGATTCACTTT+AGG | + | chr5_1:10221961-10221980 | None:intergenic | 30.0% |
| CAAGAAACTTAAAATTTGCG+TGG | + | chr5_1:10222125-10222144 | None:intergenic | 30.0% | |
| ! | AATCAAGCAAACGAATTTTC+AGG | + | chr5_1:10222152-10222171 | None:intergenic | 30.0% |
| TTATGAACGTATCTTCACTT+AGG | + | chr5_1:10222257-10222276 | None:intergenic | 30.0% | |
| TGAAGATACGTTCATAAAGT+TGG | - | chr5_1:10222260-10222279 | Msa0716750:intron | 30.0% | |
| AACATTTGTGATACTGAAGA+AGG | - | chr5_1:10222573-10222592 | Msa0716750:intron | 30.0% | |
| AAATTCTATTGCCGAAACAA+AGG | - | chr5_1:10222599-10222618 | Msa0716750:intron | 30.0% | |
| AATTCTATTGCCGAAACAAA+GGG | - | chr5_1:10222600-10222619 | Msa0716750:intron | 30.0% | |
| ATGTACATGTTCTCAAAATG+TGG | - | chr5_1:10222704-10222723 | Msa0716750:intron | 30.0% | |
| TTCTGTGAGATATAGAAAAG+AGG | + | chr5_1:10222768-10222787 | None:intergenic | 30.0% | |
| ! | CTTTTCTATATCTCACAGAA+TGG | - | chr5_1:10222768-10222787 | Msa0716750:intron | 30.0% |
| TCACAGAATGGAAATGATAA+AGG | - | chr5_1:10222780-10222799 | Msa0716750:intron | 30.0% | |
| GAATGGAAATGATAAAGGAA+AGG | - | chr5_1:10222785-10222804 | Msa0716750:intron | 30.0% | |
| CAAAATATGAAGCAATTCCA+CGG | + | chr5_1:10222817-10222836 | None:intergenic | 30.0% | |
| AATGTGTTGAGAATGAAGAT+AGG | - | chr5_1:10222847-10222866 | Msa0716750:intron | 30.0% | |
| !! | GAACTGTTGTTGGTAATAAT+TGG | + | chr5_1:10222882-10222901 | None:intergenic | 30.0% |
| AATCCTAGTTTCTTCAGAAA+TGG | + | chr5_1:10222954-10222973 | None:intergenic | 30.0% | |
| ! | GAAATTCATTTTCACCTTCT+GGG | + | chr5_1:10223008-10223027 | None:intergenic | 30.0% |
| TGTGAATGTGTGTGATATAT+TGG | - | chr5_1:10223156-10223175 | Msa0716750:five_prime_UTR | 30.0% | |
| !! | ATACATCTGCTGCTTAATTT+TGG | - | chr5_1:10223248-10223267 | Msa0716750:five_prime_UTR | 30.0% |
| GTAATTGTATTGTATAGTGG+TGG | - | chr5_1:10223289-10223308 | Msa0716750:five_prime_UTR | 30.0% | |
| ! | GGTTAAAGTATGTGATGGAA+GGG | + | chr5_1:10218675-10218694 | None:intergenic | 35.0% |
| ! | TGGTTAAAGTATGTGATGGA+AGG | + | chr5_1:10218676-10218695 | None:intergenic | 35.0% |
| CATGGCCATGAAAATTGAAA+AGG | + | chr5_1:10218744-10218763 | None:intergenic | 35.0% | |
| TTTCAAGCTCATGAGATTCT+TGG | + | chr5_1:10218828-10218847 | None:intergenic | 35.0% | |
| GCAAGGTGAACAAAAAACAA+CGG | + | chr5_1:10218891-10218910 | None:intergenic | 35.0% | |
| CCAAACTAATCAAGTGCTAT+TGG | + | chr5_1:10218964-10218983 | None:intergenic | 35.0% | |
| ! | CCAATAGCACTTGATTAGTT+TGG | - | chr5_1:10218961-10218980 | Msa0716750:three_prime_UTR | 35.0% |
| TTGGAAGTTGCTTGCATATT+TGG | - | chr5_1:10218980-10218999 | Msa0716750:three_prime_UTR | 35.0% | |
| GGTTAACAATTTGATTGGAG+AGG | + | chr5_1:10219172-10219191 | None:intergenic | 35.0% | |
| TCGGAGGTTAACAATTTGAT+TGG | + | chr5_1:10219177-10219196 | None:intergenic | 35.0% | |
| GAGAGACTTATAACCATGTT+TGG | - | chr5_1:10219239-10219258 | Msa0716750:CDS | 35.0% | |
| AACTCACTATGATCCAAACA+TGG | + | chr5_1:10219255-10219274 | None:intergenic | 35.0% | |
| TTGGTACATGTTTGGATTGA+CGG | + | chr5_1:10219372-10219391 | None:intergenic | 35.0% | |
| CTAAATTGAGAAGTGAGAAG+AGG | + | chr5_1:10219512-10219531 | None:intergenic | 35.0% | |
| CTCTTCTCACTTCTCAATTT+AGG | - | chr5_1:10219510-10219529 | Msa0716750:CDS | 35.0% | |
| !! | CACTATTGGTTCTCATTAAG+AGG | + | chr5_1:10219700-10219719 | None:intergenic | 35.0% |
| CTCTTAATGAGAACCAATAG+TGG | - | chr5_1:10219698-10219717 | Msa0716750:CDS | 35.0% | |
| AACCAATAGTGGTGAAAAAG+TGG | - | chr5_1:10219709-10219728 | Msa0716750:CDS | 35.0% | |
| GAGAATATTTCCAGACATAG+AGG | - | chr5_1:10220028-10220047 | Msa0716750:intron | 35.0% | |
| TCTATTCCTGATGAACATCT+TGG | + | chr5_1:10220062-10220081 | None:intergenic | 35.0% | |
| TAGCTTTCTGAACAAGTCAA+TGG | - | chr5_1:10220215-10220234 | Msa0716750:intron | 35.0% | |
| ACAAAGCTTAATTCCCATTC+AGG | - | chr5_1:10220439-10220458 | Msa0716750:CDS | 35.0% | |
| CAAAGCTTAATTCCCATTCA+GGG | - | chr5_1:10220440-10220459 | Msa0716750:CDS | 35.0% | |
| !! | AGTTTTATCCTTTCTGTTGC+AGG | - | chr5_1:10220611-10220630 | Msa0716750:CDS | 35.0% |
| TGAGTATGCTACATTTGTTC+TGG | - | chr5_1:10220656-10220675 | Msa0716750:CDS | 35.0% | |
| GTAAGAGAATTGCTTCATCA+AGG | - | chr5_1:10220708-10220727 | Msa0716750:CDS | 35.0% | |
| ! | TTTAACTTCAAAGTCGTCCA+TGG | + | chr5_1:10220748-10220767 | None:intergenic | 35.0% |
| CATGGAAACTTAATGTTGGT+GGG | - | chr5_1:10220921-10220940 | Msa0716750:CDS | 35.0% | |
| TAGAGAAGAACCAATTGCAA+GGG | - | chr5_1:10220971-10220990 | Msa0716750:CDS | 35.0% | |
| TACATCAACCTTGAGGATAT+TGG | + | chr5_1:10221122-10221141 | None:intergenic | 35.0% | |
| ! | TTTGGAGTCAATGTCATATG+AGG | + | chr5_1:10221248-10221267 | None:intergenic | 35.0% |
| GACTCCAAATATTGTCATGA+AGG | - | chr5_1:10221259-10221278 | Msa0716750:CDS | 35.0% | |
| TGAAGGACTTGATATCAAAG+TGG | - | chr5_1:10221276-10221295 | Msa0716750:CDS | 35.0% | |
| AAATCTTCTGTATGTCTACC+TGG | + | chr5_1:10221332-10221351 | None:intergenic | 35.0% | |
| AATCACCTCCATTAAGAGTT+TGG | - | chr5_1:10221370-10221389 | Msa0716750:CDS | 35.0% | |
| ATCACCTCCATTAAGAGTTT+GGG | - | chr5_1:10221371-10221390 | Msa0716750:CDS | 35.0% | |
| CATCAGATTCAAGTCATGAT+TGG | + | chr5_1:10221495-10221514 | None:intergenic | 35.0% | |
| CATTGAAGATCATGAAGTTG+AGG | + | chr5_1:10221599-10221618 | None:intergenic | 35.0% | |
| CTCAACTTCATGATCTTCAA+TGG | - | chr5_1:10221597-10221616 | Msa0716750:intron | 35.0% | |
| TTGCTCAAAAATCTGACTAC+TGG | + | chr5_1:10221716-10221735 | None:intergenic | 35.0% | |
| CAAAGATCAAAATTGGGCAA+GGG | + | chr5_1:10221829-10221848 | None:intergenic | 35.0% | |
| ACAAAGATCAAAATTGGGCA+AGG | + | chr5_1:10221830-10221849 | None:intergenic | 35.0% | |
| !! | GCCCAATTTTGATCTTTGTA+TGG | - | chr5_1:10221831-10221850 | Msa0716750:intron | 35.0% |
| ATCCTCAATCATATCCATGT+CGG | + | chr5_1:10222051-10222070 | None:intergenic | 35.0% | |
| AAAATTTGCGTGGATCAACT+TGG | + | chr5_1:10222115-10222134 | None:intergenic | 35.0% | |
| ! | TTTATCTTTGCACCTGCTTT+TGG | - | chr5_1:10222174-10222193 | Msa0716750:CDS | 35.0% |
| CTTCTTGATTCAGAAGTGAT+AGG | - | chr5_1:10222288-10222307 | Msa0716750:intron | 35.0% | |
| TCCAGAAAGTTCTTCCATTA+TGG | + | chr5_1:10222325-10222344 | None:intergenic | 35.0% | |
| ! | ACAGCTCTGTCTTTGAAAAA+AGG | + | chr5_1:10222525-10222544 | None:intergenic | 35.0% |
| ! | ACTTATGCATCCCTTTGTTT+CGG | + | chr5_1:10222613-10222632 | None:intergenic | 35.0% |
| ATTGCTGAAATACTTGAGAG+TGG | - | chr5_1:10222636-10222655 | Msa0716750:intron | 35.0% | |
| ! | ATTTTCTTCAGGATGACTCT+TGG | + | chr5_1:10222913-10222932 | None:intergenic | 35.0% |
| ! | TCACCATTTCTGAAGAAACT+AGG | - | chr5_1:10222948-10222967 | Msa0716750:intron | 35.0% |
| ! | GGAAATTCATTTTCACCTTC+TGG | + | chr5_1:10223009-10223028 | None:intergenic | 35.0% |
| ATTATGACTTGAGAATGCTG+AGG | + | chr5_1:10223030-10223049 | None:intergenic | 35.0% | |
| ATATCCTTGTGATACCATTG+TGG | - | chr5_1:10223048-10223067 | Msa0716750:intron | 35.0% | |
| TATCCTTGTGATACCATTGT+GGG | - | chr5_1:10223049-10223068 | Msa0716750:intron | 35.0% | |
| ACACACATTCACAAAGATTG+AGG | + | chr5_1:10223149-10223168 | None:intergenic | 35.0% | |
| ! | TAATTTTGGACTGTAACAGC+AGG | - | chr5_1:10223262-10223281 | Msa0716750:five_prime_UTR | 35.0% |
| ATTGTATTGTATAGTGGTGG+TGG | - | chr5_1:10223292-10223311 | Msa0716750:five_prime_UTR | 35.0% | |
| GAAGTTGCTTGCATATTTGG+TGG | - | chr5_1:10218983-10219002 | Msa0716750:three_prime_UTR | 40.0% | |
| CGGTGAGTTTAACAGAATCA+CGG | + | chr5_1:10219352-10219371 | None:intergenic | 40.0% | |
| CTTGTCTGATATGTAGCTGT+GGG | - | chr5_1:10219669-10219688 | Msa0716750:CDS | 40.0% | |
| !!! | CTCCACTTTTTCACCACTAT+TGG | + | chr5_1:10219714-10219733 | None:intergenic | 40.0% |
| TATGTGTACCTGAAAGGAGA+GGG | + | chr5_1:10219750-10219769 | None:intergenic | 40.0% | |
| TTATGTGTACCTGAAAGGAG+AGG | + | chr5_1:10219751-10219770 | None:intergenic | 40.0% | |
| GTTTCGTAATCAAGCTTACG+AGG | - | chr5_1:10220250-10220269 | Msa0716750:intron | 40.0% | |
| TATTACTTTCAGGCTGTGAC+AGG | - | chr5_1:10220371-10220390 | Msa0716750:intron | 40.0% | |
| CTTAATTCCCATTCAGGGTA+TGG | - | chr5_1:10220445-10220464 | Msa0716750:CDS | 40.0% | |
| TCTAGAAACCTGCAACAGAA+AGG | + | chr5_1:10220622-10220641 | None:intergenic | 40.0% | |
| !!! | GTCTTCTTTTTCGGGTCATT+TGG | + | chr5_1:10220867-10220886 | None:intergenic | 40.0% |
| GCATGGAAACTTAATGTTGG+TGG | - | chr5_1:10220920-10220939 | Msa0716750:CDS | 40.0% | |
| GTAGAGAAGAACCAATTGCA+AGG | - | chr5_1:10220970-10220989 | Msa0716750:CDS | 40.0% | |
| CTAGAGTTATCCCTTGCAAT+TGG | + | chr5_1:10220984-10221003 | None:intergenic | 40.0% | |
| GATTTCTTCGTCGAGAATCA+CGG | + | chr5_1:10221007-10221026 | None:intergenic | 40.0% | |
| ATTGGACACTTGTATTCCTC+AGG | + | chr5_1:10221104-10221123 | None:intergenic | 40.0% | |
| ACAAGTGTCCAATATCCTCA+AGG | - | chr5_1:10221111-10221130 | Msa0716750:CDS | 40.0% | |
| AGGATCATACATCAACCTTG+AGG | + | chr5_1:10221129-10221148 | None:intergenic | 40.0% | |
| GATCCTGTTATCATTGCTTC+TGG | - | chr5_1:10221143-10221162 | Msa0716750:CDS | 40.0% | |
| ACTCCAGAAGCAATGATAAC+AGG | + | chr5_1:10221149-10221168 | None:intergenic | 40.0% | |
| ACTTCCCAAACTCTTAATGG+AGG | + | chr5_1:10221378-10221397 | None:intergenic | 40.0% | |
| CAATGATCTGAACTTGCCAA+TGG | - | chr5_1:10221403-10221422 | Msa0716750:CDS | 40.0% | |
| ! | GACATGTTGGTAAGATCCAT+TGG | + | chr5_1:10221422-10221441 | None:intergenic | 40.0% |
| GATCTTACCAACATGTCACT+TGG | - | chr5_1:10221425-10221444 | Msa0716750:CDS | 40.0% | |
| CAATGATCCAAGTGACATGT+TGG | + | chr5_1:10221435-10221454 | None:intergenic | 40.0% | |
| ! | CAACATGTCACTTGGATCAT+TGG | - | chr5_1:10221433-10221452 | Msa0716750:CDS | 40.0% |
| !! | GGTCTTAACTTGTGACACAT+CGG | + | chr5_1:10221474-10221493 | None:intergenic | 40.0% |
| !! | AGGAGAAGTACTTGCCATAA+TGG | - | chr5_1:10222308-10222327 | Msa0716750:intron | 40.0% |
| ! | GCCATAATGGAAGAACTTTC+TGG | - | chr5_1:10222321-10222340 | Msa0716750:intron | 40.0% |
| ! | ATGGAAGAACTTTCTGGAGA+TGG | - | chr5_1:10222327-10222346 | Msa0716750:intron | 40.0% |
| ! | TGCATTGGATGCTGCAATTT+TGG | + | chr5_1:10222364-10222383 | None:intergenic | 40.0% |
| TAAGACAGAAGTGAGTGCAT+TGG | + | chr5_1:10222379-10222398 | None:intergenic | 40.0% | |
| TGGACAAACTTCACTGTTGT+AGG | + | chr5_1:10222466-10222485 | None:intergenic | 40.0% | |
| CAATTGACAGATACCATGTG+TGG | + | chr5_1:10222486-10222505 | None:intergenic | 40.0% | |
| !! | GTTGGTAATAATTGGCTGAG+AGG | + | chr5_1:10222874-10222893 | None:intergenic | 40.0% |
| GGAATCTGTAGAACTGTTGT+TGG | + | chr5_1:10222892-10222911 | None:intergenic | 40.0% | |
| ATCCTTGTGATACCATTGTG+GGG | - | chr5_1:10223050-10223069 | Msa0716750:intron | 40.0% | |
| ATGCTTGATAAGAGCCAGTT+TGG | - | chr5_1:10223087-10223106 | Msa0716750:intron | 40.0% | |
| TAAGAGCCAGTTTGGATTGA+TGG | - | chr5_1:10223095-10223114 | Msa0716750:intron | 40.0% | |
| TGCTATCCATCAATCCAAAC+TGG | + | chr5_1:10223104-10223123 | None:intergenic | 40.0% | |
| GTGGTGGTTATGTTTACAGT+AGG | - | chr5_1:10223314-10223333 | Msa0716750:five_prime_UTR | 40.0% | |
| ! | GAAACTGGTCTCTAGTATGT+TGG | + | chr5_1:10223405-10223424 | None:intergenic | 40.0% |
| CCACAGCTACATATCAGACA+AGG | + | chr5_1:10219671-10219690 | None:intergenic | 45.0% | |
| CCTTGTCTGATATGTAGCTG+TGG | - | chr5_1:10219668-10219687 | Msa0716750:CDS | 45.0% | |
| TCCAAATACCCTCTCCTTTC+AGG | - | chr5_1:10219739-10219758 | Msa0716750:CDS | 45.0% | |
| !! | ACCTGAAAGGAGAGGGTATT+TGG | + | chr5_1:10219743-10219762 | None:intergenic | 45.0% |
| GGAATGCAGCAAACTTTACC+TGG | - | chr5_1:10220142-10220161 | Msa0716750:intron | 45.0% | |
| ACTGGAACCATACCCTGAAT+GGG | + | chr5_1:10220455-10220474 | None:intergenic | 45.0% | |
| TCTGGATTCTGCTGAAGAAG+AGG | - | chr5_1:10220674-10220693 | Msa0716750:CDS | 45.0% | |
| ATTCTGCTGAAGAAGAGGCT+GGG | - | chr5_1:10220679-10220698 | Msa0716750:CDS | 45.0% | |
| AGGTTCAACCTCAGATTCCA+TGG | - | chr5_1:10220728-10220747 | Msa0716750:CDS | 45.0% | |
| AAAGTCGTCCATGGAATCTG+AGG | + | chr5_1:10220739-10220758 | None:intergenic | 45.0% | |
| ! | AATGTTGGTGGGAGAACACA+TGG | - | chr5_1:10220932-10220951 | Msa0716750:CDS | 45.0% |
| GATGAATCAGTCGGATAGAG+TGG | - | chr5_1:10221073-10221092 | Msa0716750:CDS | 45.0% | |
| ATGTCTACCTGGATCAGGAA+TGG | + | chr5_1:10221321-10221340 | None:intergenic | 45.0% | |
| TCTGTATGTCTACCTGGATC+AGG | + | chr5_1:10221326-10221345 | None:intergenic | 45.0% | |
| GCATGAACTGTATGCTTGTG+AGG | + | chr5_1:10221545-10221564 | None:intergenic | 45.0% | |
| CTGACACTGACAAAGTAGCT+TGG | + | chr5_1:10221676-10221695 | None:intergenic | 45.0% | |
| GAGCAATGCAAATGATCAGC+AGG | - | chr5_1:10221730-10221749 | Msa0716750:CDS | 45.0% | |
| CGGAATTTGTGAACAACTGC+AGG | - | chr5_1:10221789-10221808 | Msa0716750:CDS | 45.0% | |
| TATCCATGTCGGACAACCTT+AGG | + | chr5_1:10222040-10222059 | None:intergenic | 45.0% | |
| GTCCGACATGGATATGATTG+AGG | - | chr5_1:10222046-10222065 | Msa0716750:CDS | 45.0% | |
| CAGTGAAGTTTGTCCACACA+TGG | - | chr5_1:10222470-10222489 | Msa0716750:CDS | 45.0% | |
| !! | TAAAGGAAAGGAAAGTGCCG+TGG | - | chr5_1:10222797-10222816 | Msa0716750:intron | 45.0% |
| !! | CTTCTGGGTTTTGATGCATG+TGG | + | chr5_1:10222993-10223012 | None:intergenic | 45.0% |
| CACATGCATCAAAACCCAGA+AGG | - | chr5_1:10222991-10223010 | Msa0716750:intron | 45.0% | |
| TCCTTGTGATACCATTGTGG+GGG | - | chr5_1:10223051-10223070 | Msa0716750:intron | 45.0% | |
| GATATGTATTCCCCCCACAA+TGG | + | chr5_1:10223065-10223084 | None:intergenic | 45.0% | |
| !! | GTATTGTATAGTGGTGGTGG+TGG | - | chr5_1:10223295-10223314 | Msa0716750:five_prime_UTR | 45.0% |
| ! | ACAGTAGGCACTGTAACAGT+AGG | - | chr5_1:10223329-10223348 | Msa0716750:five_prime_UTR | 45.0% |
| ! | CAGTAGGCACTGTAACAGTA+GGG | - | chr5_1:10223330-10223349 | Msa0716750:five_prime_UTR | 45.0% |
| CTAGTATGTTGGCAGGAAGA+GGG | + | chr5_1:10223394-10223413 | None:intergenic | 45.0% | |
| TCTAGTATGTTGGCAGGAAG+AGG | + | chr5_1:10223395-10223414 | None:intergenic | 45.0% | |
| GCACGTCCAAGATGTTCATC+AGG | - | chr5_1:10220053-10220072 | Msa0716750:intron | 50.0% | |
| GACTGGAACCATACCCTGAA+TGG | + | chr5_1:10220456-10220475 | None:intergenic | 50.0% | |
| GGGTATGGTTCCAGTCATGT+TGG | - | chr5_1:10220460-10220479 | Msa0716750:CDS | 50.0% | |
| ! | TCCAGTCATGTTGGCTGTAG+AGG | - | chr5_1:10220469-10220488 | Msa0716750:CDS | 50.0% |
| ACCTCTACAGCCAACATGAC+TGG | + | chr5_1:10220473-10220492 | None:intergenic | 50.0% | |
| GATTCTGCTGAAGAAGAGGC+TGG | - | chr5_1:10220678-10220697 | Msa0716750:CDS | 50.0% | |
| GGACACTTGTATTCCTCAGG+TGG | + | chr5_1:10221101-10221120 | None:intergenic | 50.0% | |
| TTCCGACAGAAGCTGAGTTC+CGG | + | chr5_1:10221774-10221793 | None:intergenic | 50.0% | |
| GTTCCTAAGGTTGTCCGACA+TGG | - | chr5_1:10222034-10222053 | Msa0716750:intron | 50.0% | |
| TGCGTGGATCAACTTGGTTG+CGG | + | chr5_1:10222109-10222128 | None:intergenic | 50.0% | |
| CCTTGTGATACCATTGTGGG+GGG | - | chr5_1:10223052-10223071 | Msa0716750:intron | 50.0% | |
| !! | TTGTATAGTGGTGGTGGTGG+TGG | - | chr5_1:10223298-10223317 | Msa0716750:five_prime_UTR | 50.0% |
| GTTGGCAGGAAGAGGGAAAA+GGG | + | chr5_1:10223387-10223406 | None:intergenic | 50.0% | |
| TGTTGGCAGGAAGAGGGAAA+AGG | + | chr5_1:10223388-10223407 | None:intergenic | 50.0% | |
| CTGGTCTCTAGTATGTTGGC+AGG | + | chr5_1:10223401-10223420 | None:intergenic | 50.0% | |
| GGACGTGCTTCCTCTATGTC+TGG | + | chr5_1:10220041-10220060 | None:intergenic | 55.0% | |
| GGTGTCTCCATTCCTGATCC+AGG | - | chr5_1:10221311-10221330 | Msa0716750:CDS | 55.0% | |
| !! | GACGTAAAAGCGCTGAGAGC+CGG | - | chr5_1:10221752-10221771 | Msa0716750:CDS | 55.0% |
| AGCCGGAACTCAGCTTCTGT+CGG | - | chr5_1:10221769-10221788 | Msa0716750:CDS | 55.0% | |
| CCCCCCACAATGGTATCACA+AGG | + | chr5_1:10223055-10223074 | None:intergenic | 55.0% | |
| GGATAGAGTGGCACCACCTG+AGG | - | chr5_1:10221085-10221104 | Msa0716750:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 10218667 | 10223541 | 10218667 | ID=Msa0716750;Name=Msa0716750 |
| chr5_1 | mRNA | 10218667 | 10223541 | 10218667 | ID=Msa0716750-mRNA-1;Parent=Msa0716750;Name=Msa0716750-mRNA-1;_AED=0.04;_eAED=0.04;_QI=408|1|1|1|0.8|0.83|6|525|768 |
| chr5_1 | exon | 10218667 | 10219969 | 10218667 | ID=Msa0716750-mRNA-1:exon:4126;Parent=Msa0716750-mRNA-1 |
| chr5_1 | exon | 10220398 | 10221575 | 10220398 | ID=Msa0716750-mRNA-1:exon:4125;Parent=Msa0716750-mRNA-1 |
| chr5_1 | exon | 10221718 | 10221825 | 10221718 | ID=Msa0716750-mRNA-1:exon:4124;Parent=Msa0716750-mRNA-1 |
| chr5_1 | exon | 10222045 | 10222230 | 10222045 | ID=Msa0716750-mRNA-1:exon:4123;Parent=Msa0716750-mRNA-1 |
| chr5_1 | exon | 10222448 | 10222523 | 10222448 | ID=Msa0716750-mRNA-1:exon:4122;Parent=Msa0716750-mRNA-1 |
| chr5_1 | exon | 10223153 | 10223541 | 10223153 | ID=Msa0716750-mRNA-1:exon:4121;Parent=Msa0716750-mRNA-1 |
| chr5_1 | five_prime_UTR | 10223153 | 10223541 | 10223153 | ID=Msa0716750-mRNA-1:five_prime_utr;Parent=Msa0716750-mRNA-1 |
| chr5_1 | five_prime_UTR | 10222505 | 10222523 | 10222505 | ID=Msa0716750-mRNA-1:five_prime_utr;Parent=Msa0716750-mRNA-1 |
| chr5_1 | CDS | 10222448 | 10222504 | 10222448 | ID=Msa0716750-mRNA-1:cds;Parent=Msa0716750-mRNA-1 |
| chr5_1 | CDS | 10222045 | 10222230 | 10222045 | ID=Msa0716750-mRNA-1:cds;Parent=Msa0716750-mRNA-1 |
| chr5_1 | CDS | 10221718 | 10221825 | 10221718 | ID=Msa0716750-mRNA-1:cds;Parent=Msa0716750-mRNA-1 |
| chr5_1 | CDS | 10220398 | 10221575 | 10220398 | ID=Msa0716750-mRNA-1:cds;Parent=Msa0716750-mRNA-1 |
| chr5_1 | CDS | 10219192 | 10219969 | 10219192 | ID=Msa0716750-mRNA-1:cds;Parent=Msa0716750-mRNA-1 |
| chr5_1 | three_prime_UTR | 10218667 | 10219191 | 10218667 | ID=Msa0716750-mRNA-1:three_prime_utr;Parent=Msa0716750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
