Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0191700 | XP_003593490.1 | 80.620 | 258 | 7 | 2 | 29 | 248 | 13 | 265 | 1.31e-136 | 395 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0191700 | G7INX9 | 80.620 | 258 | 7 | 2 | 29 | 248 | 13 | 265 | 6.27e-137 | 395 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0134180 | Msa0191700 | 0.800069 | 1.713552e-48 | -8.615850e-47 |
Msa0191700 | Msa0233730 | 0.851609 | 7.938034e-61 | -8.615850e-47 |
Msa0191700 | Msa0312360 | 0.957093 | 6.219185e-115 | -8.615850e-47 |
Msa0191700 | Msa0729100 | 0.806909 | 6.540995e-50 | -8.615850e-47 |
Msa0191700 | Msa0788770 | 0.807196 | 5.688951e-50 | -8.615850e-47 |
Msa0191700 | Msa0807280 | 0.800184 | 1.623307e-48 | -8.615850e-47 |
Msa0191700 | Msa0807820 | 0.820285 | 7.435892e-53 | -8.615850e-47 |
Msa0191700 | Msa0866290 | 0.810690 | 1.016666e-50 | -8.615850e-47 |
Msa0191700 | Msa1174530 | 0.806534 | 7.849273e-50 | -8.615850e-47 |
Msa0191700 | Msa1404170 | 0.966053 | 2.076243e-125 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0191700 | MtrunA17_Chr2g0281521 | 80.620 | 258 | 7 | 2 | 29 | 248 | 13 | 265 | 1.21e-140 | 395 |
Msa0191700 | MtrunA17_Chr4g0047911 | 44.351 | 239 | 70 | 10 | 55 | 248 | 33 | 253 | 2.77e-38 | 134 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0191700 | AT1G61170.1 | 42.742 | 124 | 54 | 3 | 126 | 248 | 144 | 251 | 3.19e-15 | 73.2 |
Msa0191700 | AT1G11125.1 | 31.939 | 263 | 109 | 9 | 42 | 248 | 17 | 265 | 1.38e-13 | 68.9 |
Find 75 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTTGGTTTCTTCCATT+TGG | 0.164688 | 2_1:-7336720 | None:intergenic |
TCATTTGGTTTCTTCCATTT+GGG | 0.279406 | 2_1:-7336719 | None:intergenic |
ACATTAATTAATGATTATAT+TGG | 0.281195 | 2_1:+7328939 | None:intergenic |
ATTCAACAGTGGAGAGTAAA+TGG | 0.305564 | 2_1:+7337286 | Msa0191700:CDS |
AGAGACGCCGGCGAAGTTTC+CGG | 0.307275 | 2_1:+7337117 | Msa0191700:CDS |
GGAGAACGGTGGCCGGAAAA+TGG | 0.313036 | 2_1:+7337260 | Msa0191700:CDS |
GGAAAATCCACTTGTGTCAT+TGG | 0.355990 | 2_1:+7337335 | Msa0191700:CDS |
AAGGCTGTTCTTCCCTTTCC+CGG | 0.367623 | 2_1:-7337234 | None:intergenic |
TTGGTGTTGGCTAGTGGTAT+TGG | 0.377705 | 2_1:+7328958 | Msa0191700:CDS |
TTAACTGTTTCTTCTTCAAC+AGG | 0.384629 | 2_1:-7336677 | None:intergenic |
TTCTTCCCTTTCCCGGCGAT+TGG | 0.384873 | 2_1:-7337227 | None:intergenic |
TCATATCTAAACCTTTCATT+TGG | 0.387597 | 2_1:-7336734 | None:intergenic |
AAAGGGAAGAACAGCCTTGC+CGG | 0.391214 | 2_1:+7337239 | Msa0191700:CDS |
CTCTCTTCTCTCACCGGAAA+AGG | 0.407732 | 2_1:-7336965 | None:intergenic |
TGTGAAATGCTAGATCTTGA+TGG | 0.410155 | 2_1:-7336617 | None:intergenic |
TGTTCAGAGGAGAGATCAAA+TGG | 0.422598 | 2_1:+7337062 | Msa0191700:CDS |
AAGTTTCCGGCCGACGATCT+AGG | 0.423459 | 2_1:+7337130 | Msa0191700:CDS |
GACTCATCATTAGCTGTAGA+TGG | 0.427911 | 2_1:-7337309 | None:intergenic |
GACTGCTCCGACCTTCTTGC+CGG | 0.434939 | 2_1:-7337006 | None:intergenic |
AGGAAGAAGAATCTTGCAAA+AGG | 0.438874 | 2_1:+7336905 | Msa0191700:CDS |
AAACTTCGCCGGCGTCTCTC+CGG | 0.444786 | 2_1:-7337113 | None:intergenic |
ATTAATGATTATATTGGTGT+TGG | 0.444854 | 2_1:+7328945 | None:intergenic |
AGGAGAGATCAAATGGGAAA+TGG | 0.445282 | 2_1:+7337069 | Msa0191700:CDS |
AACAAACCAATCGCCGGGAA+AGG | 0.459022 | 2_1:+7337221 | Msa0191700:CDS |
CTCCGGCGAAAAGGAATGTT+GGG | 0.469114 | 2_1:+7337028 | Msa0191700:CDS |
CCGGCCACCGTTCTCCGGCA+AGG | 0.474190 | 2_1:-7337253 | None:intergenic |
ACAAACCAATCGCCGGGAAA+GGG | 0.476850 | 2_1:+7337222 | Msa0191700:CDS |
AAGAAGGTCGGAGCAGTCTC+CGG | 0.487899 | 2_1:+7337011 | Msa0191700:CDS |
CGGAGCAGTCTCCGGCGAAA+AGG | 0.493736 | 2_1:+7337019 | Msa0191700:CDS |
GTTGGCTAGTGGTATTGGCT+TGG | 0.495152 | 2_1:+7328963 | Msa0191700:CDS |
CTTGCCGGCGACTTTCTCGC+CGG | 0.497162 | 2_1:-7336991 | None:intergenic |
TACAGCTAATGATGAGTCAC+TGG | 0.507954 | 2_1:+7337314 | Msa0191700:CDS |
TGTTGTCAGAAACACCCAAA+TGG | 0.517393 | 2_1:+7336705 | Msa0191700:CDS |
TCTCCGGCGAAAAGGAATGT+TGG | 0.528330 | 2_1:+7337027 | Msa0191700:CDS |
GAATGAAGAATCAGCCTCAC+CGG | 0.529905 | 2_1:+7337094 | Msa0191700:CDS |
TGTTGAAGAAGAAACAGTTA+AGG | 0.531213 | 2_1:+7336679 | Msa0191700:CDS |
CCTTGCCGGAGAACGGTGGC+CGG | 0.531831 | 2_1:+7337253 | Msa0191700:CDS |
CGGTGAGAGAAGAGAGTCTC+CGG | 0.532502 | 2_1:+7336972 | Msa0191700:CDS |
CAGCCTCACCGGAGAGACGC+CGG | 0.541053 | 2_1:+7337105 | Msa0191700:CDS |
AGGAAAACAAACCAATCGCC+GGG | 0.548205 | 2_1:+7337216 | Msa0191700:CDS |
AGAACAGCCTTGCCGGAGAA+CGG | 0.548840 | 2_1:+7337246 | Msa0191700:CDS |
TCGTCGGCCGGAAACTTCGC+CGG | 0.554308 | 2_1:-7337124 | None:intergenic |
CGAGAAAGTCGCCGGCAAGA+AGG | 0.555971 | 2_1:+7336995 | Msa0191700:CDS |
GGAAGAAGAATCTTGCAAAA+GGG | 0.556806 | 2_1:+7336906 | Msa0191700:CDS |
TTTCATTGATAAGAGAGAAG+AGG | 0.558734 | 2_1:+7336885 | Msa0191700:CDS |
GTCTCCGGCGAGAAAGTCGC+CGG | 0.564723 | 2_1:+7336987 | Msa0191700:CDS |
AAGGAAAACAAACCAATCGC+CGG | 0.566599 | 2_1:+7337215 | Msa0191700:CDS |
AGAGATCAAATGGGAAATGG+AGG | 0.567817 | 2_1:+7337072 | Msa0191700:CDS |
AATGGAAGAAACCAAATGAA+AGG | 0.569819 | 2_1:+7336723 | Msa0191700:CDS |
CCATTGTCAGTACGAGTAGC+CGG | 0.570807 | 2_1:-7337156 | None:intergenic |
TGAGAGTGTGCTCCTCCTCA+AGG | 0.571094 | 2_1:+7328990 | Msa0191700:CDS |
TCTAGCATTTCACAAGTGAA+AGG | 0.573120 | 2_1:+7336626 | Msa0191700:CDS |
TGGTTCAACGAGATCTGTCG+TGG | 0.573822 | 2_1:+7337176 | Msa0191700:CDS |
GTTCAGAGGAGAGATCAAAT+GGG | 0.576457 | 2_1:+7337063 | Msa0191700:CDS |
CGGAGACTCTCTTCTCTCAC+CGG | 0.579715 | 2_1:-7336971 | None:intergenic |
CAACGAGATCTGTCGTGGGT+CGG | 0.580336 | 2_1:+7337181 | Msa0191700:CDS |
CGGCCGACGATCTAGGTCGC+CGG | 0.588380 | 2_1:+7337137 | Msa0191700:CDS |
AAGCATTCCAATGACACAAG+TGG | 0.592757 | 2_1:-7337342 | None:intergenic |
CCGGCTACTCGTACTGACAA+TGG | 0.600535 | 2_1:+7337156 | Msa0191700:CDS |
GAATCTTGCAAAAGGGTCAA+CGG | 0.602033 | 2_1:+7336913 | Msa0191700:CDS |
AAAGTCGCCGGCAAGAAGGT+CGG | 0.608055 | 2_1:+7336999 | Msa0191700:CDS |
GGCGAAAAGGAATGTTGGGT+CGG | 0.609373 | 2_1:+7337032 | Msa0191700:CDS |
CGGCGACCTAGATCGTCGGC+CGG | 0.611451 | 2_1:-7337136 | None:intergenic |
TCGCCGGCGTCTCTCCGGTG+AGG | 0.626235 | 2_1:-7337108 | None:intergenic |
ATTATATTGGTGTTGGCTAG+TGG | 0.626710 | 2_1:+7328952 | Msa0191700:CDS |
TCTTCTTCAACAGGAACACA+AGG | 0.632166 | 2_1:-7336668 | None:intergenic |
TGGGTCGGAGCTTATCTGCA+AGG | 0.638945 | 2_1:+7337196 | Msa0191700:CDS |
GGTCGGCGAGGATTGTTCAG+AGG | 0.639198 | 2_1:+7337049 | Msa0191700:CDS |
TAGCCGGCGACCTAGATCGT+CGG | 0.649338 | 2_1:-7337140 | None:intergenic |
ACAGCCTTGCCGGAGAACGG+TGG | 0.649383 | 2_1:+7337249 | Msa0191700:CDS |
AAAGGAATGTTGGGTCGGCG+AGG | 0.657766 | 2_1:+7337037 | Msa0191700:CDS |
TCTTCAACAGGAACACAAGG+TGG | 0.671847 | 2_1:-7336665 | None:intergenic |
GAAAATGGAAAATTCAACAG+TGG | 0.675684 | 2_1:+7337275 | Msa0191700:CDS |
GGTTCAACGAGATCTGTCGT+GGG | 0.679453 | 2_1:+7337177 | Msa0191700:CDS |
TCGAACCTGAGACCTTGAGG+AGG | 0.685881 | 2_1:-7329002 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATATAAAAAAAAATA+TGG | - | chr2_1:7332263-7332282 | None:intergenic | 0.0% |
!! | AGAAAAATTAATGATTATAT+TGG | + | chr2_1:7329248-7329267 | Msa0191700:intron | 10.0% |
!!! | TAAAAAAAAAATCGTATTTT+CGG | - | chr2_1:7329543-7329562 | None:intergenic | 10.0% |
!!! | CAAATTTTAAATAATTGTAA+CGG | + | chr2_1:7329582-7329601 | Msa0191700:intron | 10.0% |
!!! | TTATTGAAAATATTTTGTTT+TGG | + | chr2_1:7329916-7329935 | Msa0191700:intron | 10.0% |
!! | TATTATTTATAATATATGAC+TGG | - | chr2_1:7330379-7330398 | None:intergenic | 10.0% |
!! | TTTATTAACAAAAAAACTTA+TGG | - | chr2_1:7330929-7330948 | None:intergenic | 10.0% |
!!! | AATTTTTTTTTTTGAAAAAG+AGG | - | chr2_1:7331215-7331234 | None:intergenic | 10.0% |
!! | AGTACATTTAATTATTTATT+CGG | - | chr2_1:7331605-7331624 | None:intergenic | 10.0% |
!! | TAAAAATTAAATAACTCTTA+AGG | - | chr2_1:7333590-7333609 | None:intergenic | 10.0% |
!!! | TTTGTTTATCAAATTTTAAA+TGG | - | chr2_1:7333785-7333804 | None:intergenic | 10.0% |
!!! | AATTTTCATAAAACTATATA+AGG | - | chr2_1:7334306-7334325 | None:intergenic | 10.0% |
!!! | TTATATAGTTTTATGAAAAT+TGG | + | chr2_1:7334305-7334324 | Msa0191700:intron | 10.0% |
!!! | TATATAGTTTTATGAAAATT+GGG | + | chr2_1:7334306-7334325 | Msa0191700:intron | 10.0% |
!!! | TACTTTTCATTTTTAAATTA+TGG | + | chr2_1:7335618-7335637 | Msa0191700:intron | 10.0% |
!!! | TACTTTTCTTTTTAAAATTA+TGG | - | chr2_1:7335747-7335766 | None:intergenic | 10.0% |
!! | AAATAATACCTTAAAATTCT+AGG | + | chr2_1:7329145-7329164 | Msa0191700:intron | 15.0% |
!! | AATAATACCTTAAAATTCTA+GGG | + | chr2_1:7329146-7329165 | Msa0191700:intron | 15.0% |
!!! | TATAATCATTAATTTTTCTC+AGG | - | chr2_1:7329247-7329266 | None:intergenic | 15.0% |
!! | AAATAATACCTTAAAATTCT+AGG | + | chr2_1:7329145-7329164 | Msa0191700:intron | 15.0% |
!! | AATAATACCTTAAAATTCTA+GGG | + | chr2_1:7329146-7329165 | Msa0191700:intron | 15.0% |
!!! | TGATTTTTCATTTATTTGTT+AGG | - | chr2_1:7330042-7330061 | None:intergenic | 15.0% |
!! | AAATGAAAAATCATTAATCA+CGG | + | chr2_1:7330049-7330068 | Msa0191700:intron | 15.0% |
!! | TAAAAAAAATTCTTTGATCT+TGG | + | chr2_1:7330774-7330793 | Msa0191700:intron | 15.0% |
!!! | ATTTTTTTCTGGAAAAAATA+GGG | - | chr2_1:7330802-7330821 | None:intergenic | 15.0% |
!!! | TATTTTTTTCTGGAAAAAAT+AGG | - | chr2_1:7330803-7330822 | None:intergenic | 15.0% |
!!! | TATTTTTTCCAGAAAAAAAT+AGG | + | chr2_1:7330802-7330821 | Msa0191700:intron | 15.0% |
!!! | TTAGAGTTTTACATATTTAT+AGG | + | chr2_1:7331756-7331775 | Msa0191700:intron | 15.0% |
!! | TTAAAAGATGTATTAATACA+AGG | - | chr2_1:7331919-7331938 | None:intergenic | 15.0% |
!! | TTTAAATTGCTAATATTAGT+TGG | + | chr2_1:7332205-7332224 | Msa0191700:intron | 15.0% |
!!! | ATAACATTTTATTTGTTTGT+TGG | + | chr2_1:7332528-7332547 | Msa0191700:intron | 15.0% |
!! | TCTTTGATTATATACATATA+AGG | + | chr2_1:7332774-7332793 | Msa0191700:intron | 15.0% |
!! | AAACTAAATATTAGATGTAT+TGG | - | chr2_1:7332897-7332916 | None:intergenic | 15.0% |
!!! | TATTTTTTAAGATTACACTT+TGG | - | chr2_1:7334846-7334865 | None:intergenic | 15.0% |
!!! | ATTTTTCATTTCAATTTTGA+AGG | + | chr2_1:7336077-7336096 | Msa0191700:intron | 15.0% |
!! | TTCAATAAAAACAATAACAT+AGG | + | chr2_1:7336511-7336530 | Msa0191700:intron | 15.0% |
!!! | ATATTGGTTTTGATGATTTT+TGG | + | chr2_1:7329086-7329105 | Msa0191700:intron | 20.0% |
!!! | ATATTGGTTTTGATGATTTT+TGG | + | chr2_1:7329086-7329105 | Msa0191700:intron | 20.0% |
!!! | TGGTTTTGTTTCTTATATTA+AGG | + | chr2_1:7329284-7329303 | Msa0191700:intron | 20.0% |
!!! | TTTTTTTCCCTAGAATTTTA+AGG | - | chr2_1:7329334-7329353 | None:intergenic | 20.0% |
!! | TTTCTATACAACAAAATTCA+TGG | - | chr2_1:7329787-7329806 | None:intergenic | 20.0% |
!! | CAATTATCCCAATAATAAAT+TGG | + | chr2_1:7329866-7329885 | Msa0191700:intron | 20.0% |
!! | CATTGAACCAATTTATTATT+GGG | - | chr2_1:7329876-7329895 | None:intergenic | 20.0% |
!! | TCTACATTGTTTGAATTTAA+TGG | - | chr2_1:7329957-7329976 | None:intergenic | 20.0% |
!! | TTATTAGGGTTAAATTAACT+AGG | - | chr2_1:7330017-7330036 | None:intergenic | 20.0% |
!!! | TTATTTGTTAGGACTTATTA+GGG | - | chr2_1:7330031-7330050 | None:intergenic | 20.0% |
!!! | TTTATTTGTTAGGACTTATT+AGG | - | chr2_1:7330032-7330051 | None:intergenic | 20.0% |
!! | AATGAAAAATCATTAATCAC+GGG | + | chr2_1:7330050-7330069 | Msa0191700:intron | 20.0% |
!! | TCAATTCATCAACATAAAAA+CGG | + | chr2_1:7330178-7330197 | Msa0191700:intron | 20.0% |
!!! | AAAGTGAAAATTTGAGATTA+TGG | + | chr2_1:7330494-7330513 | Msa0191700:intron | 20.0% |
!!! | CTTCAATTTTAAAGTAGAAA+AGG | + | chr2_1:7330582-7330601 | Msa0191700:intron | 20.0% |
!! | AACTAAAACTAATAAGTTTG+TGG | - | chr2_1:7330622-7330641 | None:intergenic | 20.0% |
!!! | ACAAACTTATTAGTTTTAGT+TGG | + | chr2_1:7330621-7330640 | Msa0191700:intron | 20.0% |
!!! | TAACAGTTTCTATTTTGATT+GGG | - | chr2_1:7330724-7330743 | None:intergenic | 20.0% |
!!! | ATAACAGTTTCTATTTTGAT+TGG | - | chr2_1:7330725-7330744 | None:intergenic | 20.0% |
!!! | TTTTAAATGGTGATAAAACT+TGG | - | chr2_1:7331446-7331465 | None:intergenic | 20.0% |
!! | AGAGACAAATTGATAAATAA+AGG | + | chr2_1:7331654-7331673 | Msa0191700:intron | 20.0% |
!! | AGCAACAAAAAAAAGATATA+TGG | - | chr2_1:7332020-7332039 | None:intergenic | 20.0% |
!! | GTTTCTGATCATATATTATT+CGG | + | chr2_1:7332049-7332068 | Msa0191700:intron | 20.0% |
!! | ATCTATAAATTACACATGAT+AGG | - | chr2_1:7332366-7332385 | None:intergenic | 20.0% |
!!! | TTAAATTACCATTTTTCCTT+TGG | - | chr2_1:7332451-7332470 | None:intergenic | 20.0% |
!! | TCATACATAAACTTATAATG+AGG | + | chr2_1:7332578-7332597 | Msa0191700:intron | 20.0% |
!!! | ACAATAGCTTTTAAATGAAT+CGG | + | chr2_1:7332724-7332743 | Msa0191700:intron | 20.0% |
!! | CAAAACAAATCAAAAGATTA+TGG | + | chr2_1:7332917-7332936 | Msa0191700:intron | 20.0% |
!! | AAAATATACTCAACAATGTA+TGG | - | chr2_1:7333047-7333066 | None:intergenic | 20.0% |
!!! | TAGTCATTTTCACTAATAAT+TGG | + | chr2_1:7333433-7333452 | Msa0191700:intron | 20.0% |
!! | AAATTAAATAACTCTTAAGG+TGG | - | chr2_1:7333587-7333606 | None:intergenic | 20.0% |
!!! | CATATATCAAATTTTCCAAT+CGG | + | chr2_1:7333748-7333767 | Msa0191700:intron | 20.0% |
!! | CAAATGTAAAACAACATTAA+TGG | + | chr2_1:7333801-7333820 | Msa0191700:intron | 20.0% |
!! | TAAAAATTAAAAATCCGTGT+AGG | + | chr2_1:7333952-7333971 | Msa0191700:intron | 20.0% |
!!! | ACTTCTTTTAAAAATTTGCA+CGG | - | chr2_1:7333996-7334015 | None:intergenic | 20.0% |
!!! | ATGATAAATGACATTCATTT+TGG | - | chr2_1:7334135-7334154 | None:intergenic | 20.0% |
!!! | TTAAATGTTGCTTTTCTATT+AGG | - | chr2_1:7334378-7334397 | None:intergenic | 20.0% |
!! | AGAAAAGCAACATTTAATAA+AGG | + | chr2_1:7334381-7334400 | Msa0191700:intron | 20.0% |
!! | AAGAAAAAACATTTCTTGTT+AGG | + | chr2_1:7335084-7335103 | Msa0191700:intron | 20.0% |
!! | GGAAATAAAAGTTGTAAAAT+GGG | - | chr2_1:7335165-7335184 | None:intergenic | 20.0% |
!!! | CAAACACACTTTTAAATTTT+AGG | - | chr2_1:7335562-7335581 | None:intergenic | 20.0% |
!!! | CTAAAATTTAAAAGTGTGTT+TGG | + | chr2_1:7335560-7335579 | Msa0191700:intron | 20.0% |
!!! | TTTTTAATCATGGTTGTATT+TGG | - | chr2_1:7335945-7335964 | None:intergenic | 20.0% |
!!! | GTTTTATGAGTTTTTAATCA+TGG | - | chr2_1:7335955-7335974 | None:intergenic | 20.0% |
!! | AAATTGGTTAACTTTATGTT+TGG | - | chr2_1:7336222-7336241 | None:intergenic | 20.0% |
!! | ACAAGTAGTAAACATTAAAT+TGG | - | chr2_1:7336238-7336257 | None:intergenic | 20.0% |
!! | AACAAATGGTAGTTAAAAAT+TGG | - | chr2_1:7336343-7336362 | None:intergenic | 20.0% |
!!! | TTGAAAATCATTGTTTTTGT+TGG | - | chr2_1:7336597-7336616 | None:intergenic | 20.0% |
!!! | TGGTTTTGTTTCTTATGTTA+AGG | + | chr2_1:7329106-7329125 | Msa0191700:intron | 25.0% |
! | TATTATTTATGTACCCATTC+CGG | - | chr2_1:7329133-7329152 | None:intergenic | 25.0% |
!! | TTGTTTCTTATATTAAGGAC+TGG | + | chr2_1:7329289-7329308 | Msa0191700:intron | 25.0% |
! | TATAGTAACACAAAGAAGAA+GGG | - | chr2_1:7329435-7329454 | None:intergenic | 25.0% |
! | TTATAGTAACACAAAGAAGA+AGG | - | chr2_1:7329436-7329455 | None:intergenic | 25.0% |
! | ACTCATGTGAATTGATAAAA+AGG | + | chr2_1:7329607-7329626 | Msa0191700:intron | 25.0% |
! | CCATTGAACCAATTTATTAT+TGG | - | chr2_1:7329877-7329896 | None:intergenic | 25.0% |
!! | CCAATAATAAATTGGTTCAA+TGG | + | chr2_1:7329874-7329893 | Msa0191700:intron | 25.0% |
!!! | GAAAATATTTTGTTTTGGAG+AGG | + | chr2_1:7329921-7329940 | Msa0191700:intron | 25.0% |
! | TATGGTTTAATATTCGTAGA+CGG | - | chr2_1:7330091-7330110 | None:intergenic | 25.0% |
!! | ACATAAACTTTTCTGCTATA+TGG | - | chr2_1:7330109-7330128 | None:intergenic | 25.0% |
! | ATAGCAGAAAAGTTTATGTA+TGG | + | chr2_1:7330110-7330129 | Msa0191700:intron | 25.0% |
!!! | TTCAAGTAGTTGATAGTATA+TGG | - | chr2_1:7330205-7330224 | None:intergenic | 25.0% |
!!! | TATATGGAGCATCTTTTTTT+TGG | - | chr2_1:7330303-7330322 | None:intergenic | 25.0% |
! | TTCTTCAATATTGCACTATA+TGG | - | chr2_1:7330319-7330338 | None:intergenic | 25.0% |
!!! | TTATGCATTTTTTCTGCAAA+GGG | - | chr2_1:7330418-7330437 | None:intergenic | 25.0% |
!!! | CTTAACTTTTTTGTTGTACT+AGG | - | chr2_1:7330446-7330465 | None:intergenic | 25.0% |
! | AAAACTAATAAGTTTGTGGT+AGG | - | chr2_1:7330618-7330637 | None:intergenic | 25.0% |
! | TTATTGTTAGAGAATGTCTT+GGG | + | chr2_1:7330741-7330760 | Msa0191700:intron | 25.0% |
!!! | CATTCTTTCCTATTTTTTTC+TGG | - | chr2_1:7330813-7330832 | None:intergenic | 25.0% |
! | TCTAATATCTCATCATACAT+TGG | - | chr2_1:7330883-7330902 | None:intergenic | 25.0% |
! | TTTATTCGGTATTTCGTTTA+GGG | - | chr2_1:7331591-7331610 | None:intergenic | 25.0% |
! | ATTTATTCGGTATTTCGTTT+AGG | - | chr2_1:7331592-7331611 | None:intergenic | 25.0% |
! | GCAAACAAAGGATAAAAAAT+AGG | + | chr2_1:7331711-7331730 | Msa0191700:intron | 25.0% |
!!! | GCTCTTTTGAAAAATCAAAT+GGG | - | chr2_1:7331808-7331827 | None:intergenic | 25.0% |
!!! | TGCTCTTTTGAAAAATCAAA+TGG | - | chr2_1:7331809-7331828 | None:intergenic | 25.0% |
!!! | TTTCAAAAGAGCATCAATTT+CGG | + | chr2_1:7331816-7331835 | Msa0191700:intron | 25.0% |
! | TAAGAAAAAATATCGTCTCA+GGG | + | chr2_1:7332336-7332355 | Msa0191700:intron | 25.0% |
! | GTTTGCACATTATATTTCAA+AGG | + | chr2_1:7332550-7332569 | Msa0191700:intron | 25.0% |
! | TGTTACATATATAGGAACTT+TGG | - | chr2_1:7332646-7332665 | None:intergenic | 25.0% |
! | TTTCGCATTGTTACATATAT+AGG | - | chr2_1:7332654-7332673 | None:intergenic | 25.0% |
! | ACGTATCCACAAATATATAA+TGG | + | chr2_1:7332841-7332860 | Msa0191700:intron | 25.0% |
! | GGTATACCATTATATATTTG+TGG | - | chr2_1:7332850-7332869 | None:intergenic | 25.0% |
! | TGCAAATTTAGCCTATTTAT+AGG | + | chr2_1:7333152-7333171 | Msa0191700:intron | 25.0% |
! | TCTATGATTGTCCTATAAAT+AGG | - | chr2_1:7333166-7333185 | None:intergenic | 25.0% |
! | TATTTATAGGACAATCATAG+AGG | + | chr2_1:7333165-7333184 | Msa0191700:intron | 25.0% |
! | AAAACGTGTAGTGAAATATT+TGG | - | chr2_1:7333373-7333392 | None:intergenic | 25.0% |
! | AGTGTACAGCAAAAAAATTA+AGG | - | chr2_1:7333493-7333512 | None:intergenic | 25.0% |
! | TAAAAGTTAACAATCCATGA+GGG | - | chr2_1:7333563-7333582 | None:intergenic | 25.0% |
! | ATAAAAGTTAACAATCCATG+AGG | - | chr2_1:7333564-7333583 | None:intergenic | 25.0% |
! | TGTGAAAATTATTTCGCAAT+TGG | - | chr2_1:7333628-7333647 | None:intergenic | 25.0% |
! | GCAAAAAAAAGAGAGTTTAA+TGG | - | chr2_1:7333652-7333671 | None:intergenic | 25.0% |
! | CCTTAAAAAAAACTATTGTG+AGG | - | chr2_1:7333913-7333932 | None:intergenic | 25.0% |
!!! | CCTCACAATAGTTTTTTTTA+AGG | + | chr2_1:7333910-7333929 | Msa0191700:intron | 25.0% |
! | CTATATAAGGCAATGTTAAT+TGG | - | chr2_1:7334293-7334312 | None:intergenic | 25.0% |
! | TACACATTAATCCTATTTCA+AGG | + | chr2_1:7334553-7334572 | Msa0191700:intron | 25.0% |
! | AATCTATTGCTTTCATTACT+TGG | - | chr2_1:7334776-7334795 | None:intergenic | 25.0% |
! | ATCCTTAAATCATTACTGAA+AGG | + | chr2_1:7334797-7334816 | Msa0191700:intron | 25.0% |
! | TTCCTTTCAGTAATGATTTA+AGG | - | chr2_1:7334802-7334821 | None:intergenic | 25.0% |
! | CAAAACATGTATATTTGACT+TGG | - | chr2_1:7334976-7334995 | None:intergenic | 25.0% |
!!! | GTCAAATATACATGTTTTGA+CGG | + | chr2_1:7334977-7334996 | Msa0191700:intron | 25.0% |
! | TTTACCAATGCATTAGAAAA+TGG | - | chr2_1:7335053-7335072 | None:intergenic | 25.0% |
! | GGGAAATAAAAGTTGTAAAA+TGG | - | chr2_1:7335166-7335185 | None:intergenic | 25.0% |
! | TAAAACTGTCATTAACTAAG+TGG | + | chr2_1:7335524-7335543 | Msa0191700:intron | 25.0% |
! | TTCTACTGTAAAATGGATAT+AGG | - | chr2_1:7335876-7335895 | None:intergenic | 25.0% |
! | GAGATATAAAAAGCAACAAA+TGG | - | chr2_1:7336357-7336376 | None:intergenic | 25.0% |
!!! | AAAGGTAGTTTTTTCTACTA+AGG | - | chr2_1:7336441-7336460 | None:intergenic | 25.0% |
!!! | ATAGTTTTACCAACACAAAA+TGG | + | chr2_1:7336536-7336555 | Msa0191700:intron | 25.0% |
!!! | TAGTTTTACCAACACAAAAT+GGG | + | chr2_1:7336537-7336556 | Msa0191700:intron | 25.0% |
!!! | AAAATCATTGTTTTTGTTGG+TGG | - | chr2_1:7336594-7336613 | None:intergenic | 25.0% |
! | TCATATCTAAACCTTTCATT+TGG | - | chr2_1:7336737-7336756 | None:intergenic | 25.0% |
! | TCAAATTTCTCAAAACACTT+TGG | - | chr2_1:7336770-7336789 | None:intergenic | 25.0% |
! | GAAATTTGATAGAGAGAATA+AGG | + | chr2_1:7336781-7336800 | Msa0191700:intron | 25.0% |
! | TTGTTTCTTATGTTAAGGAC+CGG | + | chr2_1:7329111-7329130 | Msa0191700:intron | 30.0% |
! | TTGGTTTCCCTAGAATTTTA+AGG | - | chr2_1:7329156-7329175 | None:intergenic | 30.0% |
TCTTATATTAAGGACTGGAA+TGG | + | chr2_1:7329294-7329313 | Msa0191700:intron | 30.0% | |
CTTATATTAAGGACTGGAAT+GGG | + | chr2_1:7329295-7329314 | Msa0191700:intron | 30.0% | |
ACAAAAAGTCTAAACCTTCT+AGG | - | chr2_1:7329411-7329430 | None:intergenic | 30.0% | |
ATAGTAACACAAAGAAGAAG+GGG | - | chr2_1:7329434-7329453 | None:intergenic | 30.0% | |
TTTCATATGCACATATCAGA+GGG | - | chr2_1:7329503-7329522 | None:intergenic | 30.0% | |
TCTGATATGTGCATATGAAA+GGG | + | chr2_1:7329503-7329522 | Msa0191700:intron | 30.0% | |
CATGTGAATTGATAAAAAGG+AGG | + | chr2_1:7329610-7329629 | Msa0191700:intron | 30.0% | |
! | ATGGTTTCATTTTCGTACAT+GGG | - | chr2_1:7329693-7329712 | None:intergenic | 30.0% |
! | TATGGTTTCATTTTCGTACA+TGG | - | chr2_1:7329694-7329713 | None:intergenic | 30.0% |
! | GATTGATTAAAGTACCAACA+CGG | + | chr2_1:7329738-7329757 | Msa0191700:intron | 30.0% |
! | ATTGATTAAAGTACCAACAC+GGG | + | chr2_1:7329739-7329758 | Msa0191700:intron | 30.0% |
ATGGTTTAATATTCGTAGAC+GGG | - | chr2_1:7330090-7330109 | None:intergenic | 30.0% | |
TTGAAGAAACACAATTGCAT+AGG | + | chr2_1:7330331-7330350 | Msa0191700:intron | 30.0% | |
!!! | GTTATGCATTTTTTCTGCAA+AGG | - | chr2_1:7330419-7330438 | None:intergenic | 30.0% |
GTTATTGTTAGAGAATGTCT+TGG | + | chr2_1:7330740-7330759 | Msa0191700:intron | 30.0% | |
TATTGTTAGAGAATGTCTTG+GGG | + | chr2_1:7330742-7330761 | Msa0191700:intron | 30.0% | |
TACCAATAAATGACGATCAT+CGG | + | chr2_1:7331888-7331907 | Msa0191700:intron | 30.0% | |
GGAGACATTCACTAATAAAA+AGG | - | chr2_1:7332242-7332261 | None:intergenic | 30.0% | |
TACAAATATCTCTCAGCATT+CGG | - | chr2_1:7332318-7332337 | None:intergenic | 30.0% | |
GTAAGAAAAAATATCGTCTC+AGG | + | chr2_1:7332335-7332354 | Msa0191700:intron | 30.0% | |
!!! | TTATGGGATTTTGAAGCAAA+GGG | - | chr2_1:7333005-7333024 | None:intergenic | 30.0% |
!!! | TTTATGGGATTTTGAAGCAA+AGG | - | chr2_1:7333006-7333025 | None:intergenic | 30.0% |
TCTTCTACACGTTTATTTGT+AGG | + | chr2_1:7333515-7333534 | Msa0191700:intron | 30.0% | |
CTTCTACACGTTTATTTGTA+GGG | + | chr2_1:7333516-7333535 | Msa0191700:intron | 30.0% | |
!! | TTTTATATCACTAGCCTACA+CGG | - | chr2_1:7333969-7333988 | None:intergenic | 30.0% |
! | TTTTGGTCATATGATTGTCA+CGG | - | chr2_1:7334118-7334137 | None:intergenic | 30.0% |
TTTAATCATCATTTGCCAAG+TGG | + | chr2_1:7334332-7334351 | Msa0191700:intron | 30.0% | |
!!! | CTAAGTGTTTTTTTTCCTGA+AGG | - | chr2_1:7334653-7334672 | None:intergenic | 30.0% |
! | GATTACACTTTGGAGAAATA+TGG | - | chr2_1:7334836-7334855 | None:intergenic | 30.0% |
TAATAGAAGCTTATCCACAA+AGG | - | chr2_1:7334926-7334945 | None:intergenic | 30.0% | |
TTTGTGGATAAGCTTCTATT+AGG | + | chr2_1:7334925-7334944 | Msa0191700:intron | 30.0% | |
!! | AACATGTATATTTGACTTGG+AGG | - | chr2_1:7334973-7334992 | None:intergenic | 30.0% |
TCATTCCGAAGATAAATATG+AGG | + | chr2_1:7335013-7335032 | Msa0191700:intron | 30.0% | |
AGCTACCTCATATTTATCTT+CGG | - | chr2_1:7335021-7335040 | None:intergenic | 30.0% | |
AAAATCATCGCTCAGATAAT+TGG | - | chr2_1:7335119-7335138 | None:intergenic | 30.0% | |
! | TTAAAAGTGTGTTTGGATGA+AGG | + | chr2_1:7335567-7335586 | Msa0191700:intron | 30.0% |
CACTTGAGAAAACTTAGTTT+AGG | + | chr2_1:7335832-7335851 | Msa0191700:intron | 30.0% | |
CTGTAAAATGGATATAGGTT+TGG | - | chr2_1:7335871-7335890 | None:intergenic | 30.0% | |
! | AACTAGCTTCTACTGTAAAA+TGG | - | chr2_1:7335883-7335902 | None:intergenic | 30.0% |
AGTTATCCTCTCAAATGTTA+AGG | + | chr2_1:7335899-7335918 | Msa0191700:intron | 30.0% | |
TTGGAGTATACTTTAAGTCT+CGG | - | chr2_1:7336017-7336036 | None:intergenic | 30.0% | |
TTAAAAATTGGACAGGTCAA+TGG | - | chr2_1:7336331-7336350 | None:intergenic | 30.0% | |
ATGGTAGTTAAAAATTGGAC+AGG | - | chr2_1:7336338-7336357 | None:intergenic | 30.0% | |
GAAAACATAGATATCAACGT+AGG | - | chr2_1:7336494-7336513 | None:intergenic | 30.0% | |
! | TTAACTGTTTCTTCTTCAAC+AGG | - | chr2_1:7336680-7336699 | None:intergenic | 30.0% |
TGTTGAAGAAGAAACAGTTA+AGG | + | chr2_1:7336679-7336698 | Msa0191700:CDS | 30.0% | |
! | TCATTTGGTTTCTTCCATTT+GGG | - | chr2_1:7336722-7336741 | None:intergenic | 30.0% |
! | TTCATTTGGTTTCTTCCATT+TGG | - | chr2_1:7336723-7336742 | None:intergenic | 30.0% |
AATGGAAGAAACCAAATGAA+AGG | + | chr2_1:7336723-7336742 | Msa0191700:CDS | 30.0% | |
GATCTCATCAACTTTATAGA+AGG | - | chr2_1:7336815-7336834 | None:intergenic | 30.0% | |
TTTCATTGATAAGAGAGAAG+AGG | + | chr2_1:7336885-7336904 | Msa0191700:CDS | 30.0% | |
! | CTGTTGAATTTTCCATTTTC+CGG | - | chr2_1:7337275-7337294 | None:intergenic | 30.0% |
GAAAATGGAAAATTCAACAG+TGG | + | chr2_1:7337275-7337294 | Msa0191700:CDS | 30.0% | |
!! | ATTATATTGGTGTTGGCTAG+TGG | + | chr2_1:7328952-7328971 | Msa0191700:CDS | 35.0% |
! | TCATTTTGTGTTCACCTAGA+AGG | + | chr2_1:7329394-7329413 | Msa0191700:intron | 35.0% |
! | TATCAGAGGGTTGAGTTTTT+GGG | - | chr2_1:7329490-7329509 | None:intergenic | 35.0% |
! | ATATCAGAGGGTTGAGTTTT+TGG | - | chr2_1:7329491-7329510 | None:intergenic | 35.0% |
CTTTCATATGCACATATCAG+AGG | - | chr2_1:7329504-7329523 | None:intergenic | 35.0% | |
CTCTGATATGTGCATATGAA+AGG | + | chr2_1:7329502-7329521 | Msa0191700:intron | 35.0% | |
! | ATTTTCGTACATGGGTTTTC+TGG | - | chr2_1:7329685-7329704 | None:intergenic | 35.0% |
ATGAAACCATACAGCAAGAA+AGG | + | chr2_1:7329703-7329722 | Msa0191700:intron | 35.0% | |
!!! | TTTCAGTTTTAGACCCGATT+TGG | - | chr2_1:7330148-7330167 | None:intergenic | 35.0% |
TACTATCAACTACTTGAAGC+AGG | + | chr2_1:7330207-7330226 | Msa0191700:intron | 35.0% | |
!!! | CGGTCTCGATCTTTTTTAAA+TGG | - | chr2_1:7331459-7331478 | None:intergenic | 35.0% |
! | TTTTCTAACCACAGGTTACT+CGG | - | chr2_1:7331479-7331498 | None:intergenic | 35.0% |
!! | TTTCTTGCTTTTCTAACCAC+AGG | - | chr2_1:7331487-7331506 | None:intergenic | 35.0% |
! | CACAACTTGATAGCAAACAA+AGG | + | chr2_1:7331699-7331718 | Msa0191700:intron | 35.0% |
!!! | TTTTTTTGTTGCTTTCGCAC+TGG | + | chr2_1:7332027-7332046 | Msa0191700:intron | 35.0% |
GTATATAAGCCAAGTTGCTT+GGG | - | chr2_1:7332169-7332188 | None:intergenic | 35.0% | |
TGTATATAAGCCAAGTTGCT+TGG | - | chr2_1:7332170-7332189 | None:intergenic | 35.0% | |
GAAACTTCTTACCGATAACA+TGG | + | chr2_1:7332422-7332441 | Msa0191700:intron | 35.0% | |
! | TCCTTTGGTTTCCATGTTAT+CGG | - | chr2_1:7332436-7332455 | None:intergenic | 35.0% |
CATGGAAACCAAAGGAAAAA+TGG | + | chr2_1:7332440-7332459 | Msa0191700:intron | 35.0% | |
AGCTATTGTGTGTTTCCATA+GGG | - | chr2_1:7332713-7332732 | None:intergenic | 35.0% | |
AAGCTATTGTGTGTTTCCAT+AGG | - | chr2_1:7332714-7332733 | None:intergenic | 35.0% | |
! | TCTCCTTTTACTAAGCATAG+GGG | - | chr2_1:7332978-7332997 | None:intergenic | 35.0% |
! | CTCTCCTTTTACTAAGCATA+GGG | - | chr2_1:7332979-7332998 | None:intergenic | 35.0% |
! | TCTCTCCTTTTACTAAGCAT+AGG | - | chr2_1:7332980-7332999 | None:intergenic | 35.0% |
! | GCATACTTCTGAAAAAGAGA+AGG | + | chr2_1:7333104-7333123 | Msa0191700:intron | 35.0% |
! | ATCAAATTTTCCAATCGGAG+AGG | + | chr2_1:7333753-7333772 | Msa0191700:intron | 35.0% |
! | CATATGATTGTCACGGATTA+AGG | - | chr2_1:7334111-7334130 | None:intergenic | 35.0% |
!! | TGCAAAGCTTTGAGTGTTAT+TGG | - | chr2_1:7334699-7334718 | None:intergenic | 35.0% |
! | ACACTTTGGAGAAATATGGT+TGG | - | chr2_1:7334832-7334851 | None:intergenic | 35.0% |
! | TATCCACAAAGGTACAATAG+TGG | - | chr2_1:7334915-7334934 | None:intergenic | 35.0% |
TGGATAAGCTTCTATTAGGT+TGG | + | chr2_1:7334929-7334948 | Msa0191700:intron | 35.0% | |
! | CGTTCCATTTTCTAATGCAT+TGG | + | chr2_1:7335046-7335065 | Msa0191700:intron | 35.0% |
ATCGCTCAGATAATTGGATT+CGG | - | chr2_1:7335113-7335132 | None:intergenic | 35.0% | |
TATTCTTCGTAGAAGATCGA+GGG | - | chr2_1:7335194-7335213 | None:intergenic | 35.0% | |
TTATTCTTCGTAGAAGATCG+AGG | - | chr2_1:7335195-7335214 | None:intergenic | 35.0% | |
TTCTTTATCGCTCTCTCTAT+TGG | - | chr2_1:7335283-7335302 | None:intergenic | 35.0% | |
AAACTTAGAGAGATAGAGAG+CGG | - | chr2_1:7335427-7335446 | None:intergenic | 35.0% | |
TGTGTTTGGATGAAGGATTT+AGG | + | chr2_1:7335574-7335593 | Msa0191700:intron | 35.0% | |
TTTGGATGAAGGATTTAGGA+GGG | + | chr2_1:7335578-7335597 | Msa0191700:intron | 35.0% | |
TTTGAATTGAGGGTTTAGGA+GGG | - | chr2_1:7335787-7335806 | None:intergenic | 35.0% | |
TGTGTTTGAATTGAGGGTTT+AGG | - | chr2_1:7335791-7335810 | None:intergenic | 35.0% | |
TTAGGGTGTGTTTGAATTGA+GGG | - | chr2_1:7335797-7335816 | None:intergenic | 35.0% | |
! | TTTAGGGTGTGTTTGAATTG+AGG | - | chr2_1:7335798-7335817 | None:intergenic | 35.0% |
CAATTCAAACACACCCTAAA+AGG | + | chr2_1:7335798-7335817 | Msa0191700:intron | 35.0% | |
TCACTTCCTTAACATTTGAG+AGG | - | chr2_1:7335908-7335927 | None:intergenic | 35.0% | |
TTCTCCATGTGTAACTAGAA+AGG | + | chr2_1:7335983-7336002 | Msa0191700:intron | 35.0% | |
!! | GTTACCTTTCTAGTTACACA+TGG | - | chr2_1:7335990-7336009 | None:intergenic | 35.0% |
GTATACTTTAAGTCTCGGTA+AGG | - | chr2_1:7336012-7336031 | None:intergenic | 35.0% | |
! | AAATTTGGTTGGTGTGTCAT+GGG | - | chr2_1:7336465-7336484 | None:intergenic | 35.0% |
! | AAAATTTGGTTGGTGTGTCA+TGG | - | chr2_1:7336466-7336485 | None:intergenic | 35.0% |
GTAGGTTGTGAAAATTTGGT+TGG | - | chr2_1:7336476-7336495 | None:intergenic | 35.0% | |
CAACGTAGGTTGTGAAAATT+TGG | - | chr2_1:7336480-7336499 | None:intergenic | 35.0% | |
TGTGAAATGCTAGATCTTGA+TGG | - | chr2_1:7336620-7336639 | None:intergenic | 35.0% | |
TCTAGCATTTCACAAGTGAA+AGG | + | chr2_1:7336626-7336645 | Msa0191700:CDS | 35.0% | |
AGGAAGAAGAATCTTGCAAA+AGG | + | chr2_1:7336905-7336924 | Msa0191700:CDS | 35.0% | |
GGAAGAAGAATCTTGCAAAA+GGG | + | chr2_1:7336906-7336925 | Msa0191700:CDS | 35.0% | |
ATTCAACAGTGGAGAGTAAA+TGG | + | chr2_1:7337286-7337305 | Msa0191700:CDS | 35.0% | |
TCTTATGTTAAGGACCGGAA+TGG | + | chr2_1:7329116-7329135 | Msa0191700:intron | 40.0% | |
CTTATGTTAAGGACCGGAAT+GGG | + | chr2_1:7329117-7329136 | Msa0191700:intron | 40.0% | |
! | ACGTAACCTTTCTTGCTGTA+TGG | - | chr2_1:7329712-7329731 | None:intergenic | 40.0% |
TACCAACACGGGTCTAAAAA+TGG | + | chr2_1:7329750-7329769 | Msa0191700:intron | 40.0% | |
!! | TTCCATTTTTAGACCCGTGT+TGG | - | chr2_1:7329755-7329774 | None:intergenic | 40.0% |
!! | ACCCGATTTGGTGCTTTAAT+GGG | - | chr2_1:7330136-7330155 | None:intergenic | 40.0% |
GACCGATGATCGTCATTTAT+TGG | - | chr2_1:7331893-7331912 | None:intergenic | 40.0% | |
CAGCATTCGGATCAATTCAT+CGG | - | chr2_1:7332305-7332324 | None:intergenic | 40.0% | |
ACCGATAACATGGAAACCAA+AGG | + | chr2_1:7332432-7332451 | Msa0191700:intron | 40.0% | |
AATACATGTCGCAAACCCTA+TGG | + | chr2_1:7332695-7332714 | Msa0191700:intron | 40.0% | |
TTTCCTAACCTCATGTGCAT+GGG | - | chr2_1:7332871-7332890 | None:intergenic | 40.0% | |
! | TTTTCCTAACCTCATGTGCA+TGG | - | chr2_1:7332872-7332891 | None:intergenic | 40.0% |
TCACCCCTATGCTTAGTAAA+AGG | + | chr2_1:7332972-7332991 | Msa0191700:intron | 40.0% | |
AAGAGAAGGAAGAAACGATG+TGG | + | chr2_1:7333118-7333137 | Msa0191700:intron | 40.0% | |
! | TTTTGTTCAAGTGACCCTCA+TGG | + | chr2_1:7333546-7333565 | Msa0191700:intron | 40.0% |
ATCCTATTTCAAGGCCAAGA+AGG | + | chr2_1:7334562-7334581 | Msa0191700:intron | 40.0% | |
AGTCCAAGTAGAAGGAGAAA+TGG | + | chr2_1:7334588-7334607 | Msa0191700:intron | 40.0% | |
GTCCAAGTAGAAGGAGAAAT+GGG | + | chr2_1:7334589-7334608 | Msa0191700:intron | 40.0% | |
CTTGAGATTTCAACTCCTTC+AGG | + | chr2_1:7334635-7334654 | Msa0191700:intron | 40.0% | |
!!! | TTTTTGTGCTTGGTGTAGGA+TGG | - | chr2_1:7334888-7334907 | None:intergenic | 40.0% |
ATCCTACACCAAGCACAAAA+AGG | + | chr2_1:7334887-7334906 | Msa0191700:intron | 40.0% | |
!!! | ATCCTTTTTGTGCTTGGTGT+AGG | - | chr2_1:7334892-7334911 | None:intergenic | 40.0% |
!! | TAGTGGATCCTTTTTGTGCT+TGG | - | chr2_1:7334898-7334917 | None:intergenic | 40.0% |
GATCCACTATTGTACCTTTG+TGG | + | chr2_1:7334909-7334928 | Msa0191700:intron | 40.0% | |
TCGCTCAGATAATTGGATTC+GGG | - | chr2_1:7335112-7335131 | None:intergenic | 40.0% | |
AACTTAGAGAGATAGAGAGC+GGG | - | chr2_1:7335426-7335445 | None:intergenic | 40.0% | |
GTTTGGATGAAGGATTTAGG+AGG | + | chr2_1:7335577-7335596 | Msa0191700:intron | 40.0% | |
TTGGATGAAGGATTTAGGAG+GGG | + | chr2_1:7335579-7335598 | Msa0191700:intron | 40.0% | |
TTGAATTGAGGGTTTAGGAG+GGG | - | chr2_1:7335786-7335805 | None:intergenic | 40.0% | |
GTTTGAATTGAGGGTTTAGG+AGG | - | chr2_1:7335788-7335807 | None:intergenic | 40.0% | |
!! | TGTCGCTTCTCATCCTTTTA+GGG | - | chr2_1:7335814-7335833 | None:intergenic | 40.0% |
ATGGTTGTATTTGGAGAGTG+AGG | - | chr2_1:7335936-7335955 | None:intergenic | 40.0% | |
AAATTGGACAGGTCAATGGA+TGG | - | chr2_1:7336327-7336346 | None:intergenic | 40.0% | |
! | GTGACTAGTTGAACAAGAAG+AGG | - | chr2_1:7336391-7336410 | None:intergenic | 40.0% |
! | CACAACAACCCATTTTGTGT+TGG | - | chr2_1:7336548-7336567 | None:intergenic | 40.0% |
TCTTCTTCAACAGGAACACA+AGG | - | chr2_1:7336671-7336690 | None:intergenic | 40.0% | |
TGTTGTCAGAAACACCCAAA+TGG | + | chr2_1:7336705-7336724 | Msa0191700:CDS | 40.0% | |
!! | TGAGATCTCTGAAGTTTCTG+AGG | + | chr2_1:7336828-7336847 | Msa0191700:intron | 40.0% |
GAATCTTGCAAAAGGGTCAA+CGG | + | chr2_1:7336913-7336932 | Msa0191700:CDS | 40.0% | |
!! | ACCATTTTTGCGCATTTTCG+CGG | - | chr2_1:7336944-7336963 | None:intergenic | 40.0% |
! | CGCAAAAATGGTTCCTTTTC+CGG | + | chr2_1:7336952-7336971 | Msa0191700:CDS | 40.0% |
TGTTCAGAGGAGAGATCAAA+TGG | + | chr2_1:7337062-7337081 | Msa0191700:CDS | 40.0% | |
GTTCAGAGGAGAGATCAAAT+GGG | + | chr2_1:7337063-7337082 | Msa0191700:CDS | 40.0% | |
AGGAGAGATCAAATGGGAAA+TGG | + | chr2_1:7337069-7337088 | Msa0191700:CDS | 40.0% | |
AGAGATCAAATGGGAAATGG+AGG | + | chr2_1:7337072-7337091 | Msa0191700:CDS | 40.0% | |
AAGGAAAACAAACCAATCGC+CGG | + | chr2_1:7337215-7337234 | Msa0191700:CDS | 40.0% | |
GACTCATCATTAGCTGTAGA+TGG | - | chr2_1:7337312-7337331 | None:intergenic | 40.0% | |
TACAGCTAATGATGAGTCAC+TGG | + | chr2_1:7337314-7337333 | Msa0191700:CDS | 40.0% | |
GGAAAATCCACTTGTGTCAT+TGG | + | chr2_1:7337335-7337354 | Msa0191700:CDS | 40.0% | |
AAGCATTCCAATGACACAAG+TGG | - | chr2_1:7337345-7337364 | None:intergenic | 40.0% | |
!! | TTGGTGTTGGCTAGTGGTAT+TGG | + | chr2_1:7328958-7328977 | Msa0191700:CDS | 45.0% |
! | CTCTCTGGTGTCAATTTCGA+TGG | + | chr2_1:7329027-7329046 | Msa0191700:intron | 45.0% |
! | CTCTCTGGTGTCAATTTCGA+TGG | - | chr2_1:7329027-7329046 | None:intergenic | 45.0% |
TTCTCAGGTTCGATTCTCTC+TGG | - | chr2_1:7329232-7329251 | None:intergenic | 45.0% | |
! | GGCCCATTAAAGCACCAAAT+CGG | + | chr2_1:7330131-7330150 | Msa0191700:intron | 45.0% |
! | GCCCATTAAAGCACCAAATC+GGG | + | chr2_1:7330132-7330151 | Msa0191700:intron | 45.0% |
!! | GACCCGATTTGGTGCTTTAA+TGG | - | chr2_1:7330137-7330156 | None:intergenic | 45.0% |
GAATACTGAGTTCGATTCCC+AGG | - | chr2_1:7332107-7332126 | None:intergenic | 45.0% | |
CATTCGGATCAATTCATCGG+TGG | - | chr2_1:7332302-7332321 | None:intergenic | 45.0% | |
ATGGTATACCCATGCACATG+AGG | + | chr2_1:7332860-7332879 | Msa0191700:intron | 45.0% | |
ATACCCATGCACATGAGGTT+AGG | + | chr2_1:7332865-7332884 | Msa0191700:intron | 45.0% | |
AGAAGGAAGAAACGATGTGG+CGG | + | chr2_1:7333121-7333140 | Msa0191700:intron | 45.0% | |
! | CACATATGCATTGTGCCACT+TGG | - | chr2_1:7334350-7334369 | None:intergenic | 45.0% |
CAAGTGGCACAATGCATATG+TGG | + | chr2_1:7334348-7334367 | Msa0191700:intron | 45.0% | |
!! | CTCCTTCTTGGCCTTGAAAT+AGG | - | chr2_1:7334567-7334586 | None:intergenic | 45.0% |
CTATTTCAAGGCCAAGAAGG+AGG | + | chr2_1:7334565-7334584 | Msa0191700:intron | 45.0% | |
CTCCCATTTCTCCTTCTACT+TGG | - | chr2_1:7334594-7334613 | None:intergenic | 45.0% | |
GCTCAGATAATTGGATTCGG+GGG | - | chr2_1:7335110-7335129 | None:intergenic | 45.0% | |
CGCTCAGATAATTGGATTCG+GGG | - | chr2_1:7335111-7335130 | None:intergenic | 45.0% | |
GTAGAAGATCGAGGGAGATA+GGG | - | chr2_1:7335186-7335205 | None:intergenic | 45.0% | |
ACTTAGAGAGATAGAGAGCG+GGG | - | chr2_1:7335425-7335444 | None:intergenic | 45.0% | |
!!! | GTGTCGCTTCTCATCCTTTT+AGG | - | chr2_1:7335815-7335834 | None:intergenic | 45.0% |
TCTTCAACAGGAACACAAGG+TGG | - | chr2_1:7336668-7336687 | None:intergenic | 45.0% | |
!! | CCATTTTTGCGCATTTTCGC+GGG | - | chr2_1:7336943-7336962 | None:intergenic | 45.0% |
GAATGAAGAATCAGCCTCAC+CGG | + | chr2_1:7337094-7337113 | Msa0191700:CDS | 45.0% | |
AGGAAAACAAACCAATCGCC+GGG | + | chr2_1:7337216-7337235 | Msa0191700:CDS | 45.0% | |
!! | AAAAAAATTAATGATTATAT+TGG | + | chr2_1:7329070-7329089 | Msa0191700:intron | 5.0% |
!! | AAAAAAATTAATGATTATAT+TGG | - | chr2_1:7329070-7329089 | None:intergenic | 5.0% |
!!! | GATTTTTTTTTTAAATATTT+TGG | + | chr2_1:7329550-7329569 | Msa0191700:intron | 5.0% |
!!! | TTTTTTTCTTTAATTAATAA+TGG | - | chr2_1:7331288-7331307 | None:intergenic | 5.0% |
!!! | TAAAAAGAATTTATTTTTTT+TGG | + | chr2_1:7331842-7331861 | Msa0191700:intron | 5.0% |
!!! | AATTTAAAAACTTTTAAATA+TGG | - | chr2_1:7332193-7332212 | None:intergenic | 5.0% |
!!! | AGTTTTTTTTTTTTTTTTAT+GGG | - | chr2_1:7333021-7333040 | None:intergenic | 5.0% |
!!! | AAGTTTTTTTTTTTTTTTTA+TGG | - | chr2_1:7333022-7333041 | None:intergenic | 5.0% |
!! | AAAAAAATTAATGTTAAAAT+TGG | + | chr2_1:7333853-7333872 | Msa0191700:intron | 5.0% |
!!! | AAATATTTCTTTTAAATTTT+TGG | - | chr2_1:7335477-7335496 | None:intergenic | 5.0% |
!!! | ATTATAACTAAATTTAATTT+TGG | - | chr2_1:7336036-7336055 | None:intergenic | 5.0% |
!! | GTTGGCTAGTGGTATTGGCT+TGG | + | chr2_1:7328963-7328982 | Msa0191700:CDS | 50.0% |
GAATCGAACCTGAGACCTTG+AGG | - | chr2_1:7329008-7329027 | None:intergenic | 50.0% | |
GTCTCAGGTTCGATTCTCTC+TGG | + | chr2_1:7329012-7329031 | Msa0191700:intron | 50.0% | |
GAACCCGCGTACATTAATCG+CGG | + | chr2_1:7329652-7329671 | Msa0191700:intron | 50.0% | |
AACCCGCGTACATTAATCGC+GGG | + | chr2_1:7329653-7329672 | Msa0191700:intron | 50.0% | |
!! | AATGGGAGCACTGATGAGAG+TGG | - | chr2_1:7331791-7331810 | None:intergenic | 50.0% |
TACTGAGTTCGATTCCCAGG+AGG | - | chr2_1:7332104-7332123 | None:intergenic | 50.0% | |
GTATTCCCCGAGTATGTCCT+TGG | + | chr2_1:7332121-7332140 | Msa0191700:intron | 50.0% | |
TCCTTCCAAGGACATACTCG+GGG | - | chr2_1:7332129-7332148 | None:intergenic | 50.0% | |
CTCCTTCCAAGGACATACTC+GGG | - | chr2_1:7332130-7332149 | None:intergenic | 50.0% | |
GCTCCTTCCAAGGACATACT+CGG | - | chr2_1:7332131-7332150 | None:intergenic | 50.0% | |
ATGGCAATGAGCTCCTTCCA+AGG | - | chr2_1:7332141-7332160 | None:intergenic | 50.0% | |
TGGAAGGAGCTCATTGCCAT+TGG | + | chr2_1:7332141-7332160 | Msa0191700:intron | 50.0% | |
CCAAGTTGCTTGGGTTCCAA+TGG | - | chr2_1:7332160-7332179 | None:intergenic | 50.0% | |
CCATTGGAACCCAAGCAACT+TGG | + | chr2_1:7332157-7332176 | Msa0191700:intron | 50.0% | |
! | AGAAACGATGTGGCGGAAAG+TGG | + | chr2_1:7333128-7333147 | Msa0191700:intron | 50.0% |
CTACTTGGACTCCTCCTTCT+TGG | - | chr2_1:7334579-7334598 | None:intergenic | 50.0% | |
GAAGGAGGAGTCCAAGTAGA+AGG | + | chr2_1:7334580-7334599 | Msa0191700:intron | 50.0% | |
TGGTGTAGGATGGAAGGAGA+GGG | - | chr2_1:7334878-7334897 | None:intergenic | 50.0% | |
TTGGTGTAGGATGGAAGGAG+AGG | - | chr2_1:7334879-7334898 | None:intergenic | 50.0% | |
!! | TGTGCTTGGTGTAGGATGGA+AGG | - | chr2_1:7334884-7334903 | None:intergenic | 50.0% |
CGTAGAAGATCGAGGGAGAT+AGG | - | chr2_1:7335187-7335206 | None:intergenic | 50.0% | |
CTTAGAGAGATAGAGAGCGG+GGG | - | chr2_1:7335424-7335443 | None:intergenic | 50.0% | |
TTAGGAGGGGAAGAGATGAG+AGG | + | chr2_1:7335592-7335611 | Msa0191700:intron | 50.0% | |
TAGGAGGGGAAGAGATGAGA+GGG | + | chr2_1:7335593-7335612 | Msa0191700:intron | 50.0% | |
TTGAGGGTTTAGGAGGGGAA+GGG | - | chr2_1:7335781-7335800 | None:intergenic | 50.0% | |
ATTGAGGGTTTAGGAGGGGA+AGG | - | chr2_1:7335782-7335801 | None:intergenic | 50.0% | |
TGGACAGGTCAATGGATGGA+AGG | - | chr2_1:7336323-7336342 | None:intergenic | 50.0% | |
! | GGTTGGTGTGTCATGGGAAA+AGG | - | chr2_1:7336459-7336478 | None:intergenic | 50.0% |
CCCGCGAAAATGCGCAAAAA+TGG | + | chr2_1:7336940-7336959 | Msa0191700:CDS | 50.0% | |
CTCTCTTCTCTCACCGGAAA+AGG | - | chr2_1:7336968-7336987 | None:intergenic | 50.0% | |
TCTCCGGCGAAAAGGAATGT+TGG | + | chr2_1:7337027-7337046 | Msa0191700:CDS | 50.0% | |
CTCCGGCGAAAAGGAATGTT+GGG | + | chr2_1:7337028-7337047 | Msa0191700:CDS | 50.0% | |
! | GACCCAACATTCCTTTTCGC+CGG | - | chr2_1:7337033-7337052 | None:intergenic | 50.0% |
GGCGAAAAGGAATGTTGGGT+CGG | + | chr2_1:7337032-7337051 | Msa0191700:CDS | 50.0% | |
CCATTGTCAGTACGAGTAGC+CGG | - | chr2_1:7337159-7337178 | None:intergenic | 50.0% | |
TGGTTCAACGAGATCTGTCG+TGG | + | chr2_1:7337176-7337195 | Msa0191700:CDS | 50.0% | |
GGTTCAACGAGATCTGTCGT+GGG | + | chr2_1:7337177-7337196 | Msa0191700:CDS | 50.0% | |
AACAAACCAATCGCCGGGAA+AGG | + | chr2_1:7337221-7337240 | Msa0191700:CDS | 50.0% | |
ACAAACCAATCGCCGGGAAA+GGG | + | chr2_1:7337222-7337241 | Msa0191700:CDS | 50.0% | |
AAGGCTGTTCTTCCCTTTCC+CGG | - | chr2_1:7337237-7337256 | None:intergenic | 50.0% | |
AAAGGGAAGAACAGCCTTGC+CGG | + | chr2_1:7337239-7337258 | Msa0191700:CDS | 50.0% | |
! | TGAGAGTGTGCTCCTCCTCA+AGG | + | chr2_1:7328990-7329009 | Msa0191700:CDS | 55.0% |
TCGAACCTGAGACCTTGAGG+AGG | - | chr2_1:7329005-7329024 | None:intergenic | 55.0% | |
TGCCCGCGATTAATGTACGC+GGG | - | chr2_1:7329658-7329677 | None:intergenic | 55.0% | |
GTGCCCGCGATTAATGTACG+CGG | - | chr2_1:7329659-7329678 | None:intergenic | 55.0% | |
GATCGAGACCGAGTAACCTG+TGG | + | chr2_1:7331468-7331487 | Msa0191700:intron | 55.0% | |
ATTCGGCTCATGCGTAGCAC+TGG | + | chr2_1:7332066-7332085 | Msa0191700:intron | 55.0% | |
TTCCCAGGAGGAACAACGCT+TGG | - | chr2_1:7332092-7332111 | None:intergenic | 55.0% | |
TCCCCGAGTATGTCCTTGGA+AGG | + | chr2_1:7332125-7332144 | Msa0191700:intron | 55.0% | |
ATGGCGTGATCCTCTCCGAT+TGG | - | chr2_1:7333766-7333785 | None:intergenic | 55.0% | |
CGGAGACTCTCTTCTCTCAC+CGG | - | chr2_1:7336974-7336993 | None:intergenic | 55.0% | |
CGGTGAGAGAAGAGAGTCTC+CGG | + | chr2_1:7336972-7336991 | Msa0191700:CDS | 55.0% | |
AAAGTCGCCGGCAAGAAGGT+CGG | + | chr2_1:7336999-7337018 | Msa0191700:CDS | 55.0% | |
AAGAAGGTCGGAGCAGTCTC+CGG | + | chr2_1:7337011-7337030 | Msa0191700:CDS | 55.0% | |
AAAGGAATGTTGGGTCGGCG+AGG | + | chr2_1:7337037-7337056 | Msa0191700:CDS | 55.0% | |
AAGTTTCCGGCCGACGATCT+AGG | + | chr2_1:7337130-7337149 | Msa0191700:CDS | 55.0% | |
! | CCGGCTACTCGTACTGACAA+TGG | + | chr2_1:7337156-7337175 | Msa0191700:CDS | 55.0% |
CAACGAGATCTGTCGTGGGT+CGG | + | chr2_1:7337181-7337200 | Msa0191700:CDS | 55.0% | |
TGGGTCGGAGCTTATCTGCA+AGG | + | chr2_1:7337196-7337215 | Msa0191700:CDS | 55.0% | |
TTCTTCCCTTTCCCGGCGAT+TGG | - | chr2_1:7337230-7337249 | None:intergenic | 55.0% | |
AGAACAGCCTTGCCGGAGAA+CGG | + | chr2_1:7337246-7337265 | Msa0191700:CDS | 55.0% | |
! | ATTTTCCGGCCACCGTTCTC+CGG | - | chr2_1:7337261-7337280 | None:intergenic | 55.0% |
GTGCTCCTCCTCAAGGTCTC+AGG | + | chr2_1:7328997-7329016 | Msa0191700:intron | 60.0% | |
! | TGGCCAAGCGTTGTTCCTCC+TGG | + | chr2_1:7332086-7332105 | Msa0191700:intron | 60.0% |
! | GGCCAAGCGTTGTTCCTCCT+GGG | + | chr2_1:7332087-7332106 | Msa0191700:intron | 60.0% |
CGAGAAAGTCGCCGGCAAGA+AGG | + | chr2_1:7336995-7337014 | Msa0191700:CDS | 60.0% | |
GACTGCTCCGACCTTCTTGC+CGG | - | chr2_1:7337009-7337028 | None:intergenic | 60.0% | |
GGTCGGCGAGGATTGTTCAG+AGG | + | chr2_1:7337049-7337068 | Msa0191700:CDS | 60.0% | |
AAACTTCGCCGGCGTCTCTC+CGG | - | chr2_1:7337116-7337135 | None:intergenic | 60.0% | |
AGAGACGCCGGCGAAGTTTC+CGG | + | chr2_1:7337117-7337136 | Msa0191700:CDS | 60.0% | |
TAGCCGGCGACCTAGATCGT+CGG | - | chr2_1:7337143-7337162 | None:intergenic | 60.0% | |
GGAGAACGGTGGCCGGAAAA+TGG | + | chr2_1:7337260-7337279 | Msa0191700:CDS | 60.0% | |
GTCTCCGGCGAGAAAGTCGC+CGG | + | chr2_1:7336987-7337006 | Msa0191700:CDS | 65.0% | |
CTTGCCGGCGACTTTCTCGC+CGG | - | chr2_1:7336994-7337013 | None:intergenic | 65.0% | |
CGGAGCAGTCTCCGGCGAAA+AGG | + | chr2_1:7337019-7337038 | Msa0191700:CDS | 65.0% | |
TCGTCGGCCGGAAACTTCGC+CGG | - | chr2_1:7337127-7337146 | None:intergenic | 65.0% | |
ACAGCCTTGCCGGAGAACGG+TGG | + | chr2_1:7337249-7337268 | Msa0191700:CDS | 65.0% | |
CAGCCTCACCGGAGAGACGC+CGG | + | chr2_1:7337105-7337124 | Msa0191700:CDS | 70.0% | |
CGGCGACCTAGATCGTCGGC+CGG | - | chr2_1:7337139-7337158 | None:intergenic | 70.0% | |
CGGCCGACGATCTAGGTCGC+CGG | + | chr2_1:7337137-7337156 | Msa0191700:CDS | 70.0% | |
CCTTGCCGGAGAACGGTGGC+CGG | + | chr2_1:7337253-7337272 | Msa0191700:CDS | 70.0% | |
TCGCCGGCGTCTCTCCGGTG+AGG | - | chr2_1:7337111-7337130 | None:intergenic | 75.0% | |
CCGGCCACCGTTCTCCGGCA+AGG | - | chr2_1:7337256-7337275 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 7328949 | 7337377 | 7328949 | ID=Msa0191700;Name=Msa0191700 |
chr2_1 | mRNA | 7328949 | 7337377 | 7328949 | ID=Msa0191700-mRNA-1;Parent=Msa0191700;Name=Msa0191700-mRNA-1;_AED=0.14;_eAED=0.18;_QI=0|0|0|0.66|1|1|3|0|248 |
chr2_1 | exon | 7328949 | 7329011 | 7328949 | ID=Msa0191700-mRNA-1:exon:3366;Parent=Msa0191700-mRNA-1 |
chr2_1 | exon | 7336581 | 7336744 | 7336581 | ID=Msa0191700-mRNA-1:exon:3367;Parent=Msa0191700-mRNA-1 |
chr2_1 | exon | 7336858 | 7337377 | 7336858 | ID=Msa0191700-mRNA-1:exon:3368;Parent=Msa0191700-mRNA-1 |
chr2_1 | CDS | 7328949 | 7329011 | 7328949 | ID=Msa0191700-mRNA-1:cds;Parent=Msa0191700-mRNA-1 |
chr2_1 | CDS | 7336581 | 7336744 | 7336581 | ID=Msa0191700-mRNA-1:cds;Parent=Msa0191700-mRNA-1 |
chr2_1 | CDS | 7336858 | 7337377 | 7336858 | ID=Msa0191700-mRNA-1:cds;Parent=Msa0191700-mRNA-1 |
Gene Sequence |
Protein sequence |