AlfalfaGEDB | Msa0218050

M. sativa cultivar zhongmu-4 / Msa0218050

KEGG: K00430
GO: GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010087 GO:0010089 GO:0012505 GO:0019222 GO:0019438 GO:0019748 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043455 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0048046 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0065007 GO:0071704 GO:0071944 GO:1900376 GO:1900378 GO:1901141 GO:1901360 GO:1901362 GO:1901428 GO:1901430 GO:1901576 GO:2000762
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0218050	XP_003596716.1	96.226	318	12	0	15	332	1	318	0.0	627

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0218050	sp\|Q9FLC0\|PER52_ARATH	62.752	298	108	2	37	332	28	324	1.67e-133	385

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0218050	G7IM81	96.226	318	12	0	15	332	1	318	0.0	627

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0065680	Msa0218050	-0.804292	2.316967e-49	-8.615850e-47
Msa0187830	Msa0218050	0.823556	1.299742e-53	-8.615850e-47
Msa0195100	Msa0218050	0.800507	1.395297e-48	-8.615850e-47
Msa0218050	Msa0258030	0.940219	3.391162e-100	-8.615850e-47
Msa0218050	Msa0432670	0.804433	2.165052e-49	-8.615850e-47
Msa0218050	Msa0696850	0.820782	5.717614e-53	-8.615850e-47
Msa0218050	Msa1177560	0.805465	1.317523e-49	-8.615850e-47
Msa0218050	Msa1253450	0.815734	7.944481e-52	-8.615850e-47
Msa0218050	Msa1376930	0.801093	1.059226e-48	-8.615850e-47
Msa0218050	Msa1424630	0.812790	3.550835e-51	-8.615850e-47
Msa0218050	Msa1458340	0.803193	3.918462e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0218050	MtrunA17_Chr2g0320051	96.226	318	12	0	15	332	1	318	0.0	627
Msa0218050	MtrunA17_Chr2g0320061	91.824	318	26	0	15	332	1	318	0.0	600
Msa0218050	MtrunA17_Chr2g0320101	85.849	318	44	1	15	332	1	317	0.0	560
Msa0218050	MtrunA17_Chr2g0320071	84.277	318	49	1	15	332	1	317	0.0	549
Msa0218050	MtrunA17_Chr2g0320031	82.132	319	56	1	15	332	1	319	0.0	544
Msa0218050	MtrunA17_Chr2g0320091	75.862	319	75	2	15	332	1	318	1.35e-176	491
Msa0218050	MtrunA17_Chr3g0129051	65.916	311	103	2	24	332	13	322	1.25e-145	413
Msa0218050	MtrunA17_Chr3g0129061	65.495	313	105	3	22	332	11	322	1.78e-140	400
Msa0218050	MtrunA17_Chr3g0129041	64.286	322	110	3	13	332	4	322	9.87e-138	393
Msa0218050	MtrunA17_Chr7g0244461	58.387	310	128	1	23	332	4	312	3.69e-132	379
Msa0218050	MtrunA17_Chr5g0438021	59.365	315	124	3	21	332	12	325	1.23e-131	378
Msa0218050	MtrunA17_Chr7g0244451	58.446	296	122	1	37	332	22	316	7.67e-126	363
Msa0218050	MtrunA17_Chr3g0106921	54.777	314	138	3	22	332	8	320	5.27e-125	361
Msa0218050	MtrunA17_Chr1g0213061	55.280	322	141	2	13	332	1	321	4.26e-122	354
Msa0218050	MtrunA17_Chr3g0106901	58.599	314	128	2	19	332	12	323	3.25e-120	349
Msa0218050	MtrunA17_Chr4g0013171	55.732	314	136	3	21	332	9	321	1.32e-119	347
Msa0218050	MtrunA17_Chr3g0114451	55.769	312	137	1	21	332	8	318	1.93e-118	344
Msa0218050	MtrunA17_Chr5g0432441	56.667	300	125	3	37	332	28	326	7.14e-117	340
Msa0218050	MtrunA17_Chr5g0432351	56.954	302	125	4	35	332	21	321	9.76e-117	340
Msa0218050	MtrunA17_Chr4g0013201	54.045	309	141	1	24	332	31	338	2.32e-116	340
Msa0218050	MtrunA17_Chr5g0432341	56.954	302	125	4	35	332	21	321	8.84e-116	337
Msa0218050	MtrunA17_Chr7g0224371	52.381	315	146	3	20	332	10	322	9.12e-115	335
Msa0218050	MtrunA17_Chr4g0038171	53.797	316	139	3	21	332	9	321	8.52e-114	332
Msa0218050	MtrunA17_Chr4g0043391	54.140	314	137	3	23	332	14	324	9.42e-114	332
Msa0218050	MtrunA17_Chr5g0432331	54.747	316	137	5	21	332	39	352	5.47e-113	332
Msa0218050	MtrunA17_Chr4g0013181	55.973	293	126	3	42	332	62	353	1.38e-112	330
Msa0218050	MtrunA17_Chr3g0107881	51.746	315	148	3	22	332	10	324	2.68e-112	329
Msa0218050	MtrunA17_Chr4g0013191	51.026	341	150	5	8	332	1	340	2.85e-112	329
Msa0218050	MtrunA17_Chr5g0404721	52.159	301	137	1	39	332	30	330	2.40e-111	327
Msa0218050	MtrunA17_Chr4g0038151	52.038	319	146	4	18	332	6	321	3.16e-110	323
Msa0218050	MtrunA17_Chr4g0038161	54.153	301	133	3	36	332	21	320	2.99e-109	321
Msa0218050	MtrunA17_Chr5g0402581	51.220	328	150	4	13	332	1	326	9.61e-109	320
Msa0218050	MtrunA17_Chr5g0402571	52.532	316	137	5	25	332	16	326	4.45e-107	315
Msa0218050	MtrunA17_Chr8g0372601	50.166	301	143	1	39	332	30	330	5.70e-106	313
Msa0218050	MtrunA17_Chr1g0175561	50.163	307	144	3	35	332	20	326	1.78e-102	304
Msa0218050	MtrunA17_Chr2g0299691	49.689	322	145	4	22	332	43	358	1.75e-100	300
Msa0218050	MtrunA17_Chr4g0070951	50.327	306	140	3	37	332	26	329	2.49e-100	298
Msa0218050	MtrunA17_Chr7g0258811	48.860	307	148	3	35	332	65	371	3.66e-100	300
Msa0218050	MtrunA17_Chr1g0155611	50.331	302	142	2	39	332	46	347	2.83e-98	294
Msa0218050	MtrunA17_Chr2g0292211	45.886	316	163	2	25	332	26	341	2.27e-94	285
Msa0218050	MtrunA17_Chr2g0292151	47.231	307	154	2	34	332	24	330	3.01e-94	284
Msa0218050	MtrunA17_Chr2g0292271	47.059	306	154	2	35	332	25	330	5.18e-94	283
Msa0218050	MtrunA17_Chr4g0068621	46.205	303	158	1	35	332	34	336	8.32e-94	282
Msa0218050	MtrunA17_Chr2g0292091	47.368	304	152	2	37	332	22	325	1.14e-93	282
Msa0218050	MtrunA17_Chr2g0292251	46.580	307	156	2	34	332	23	329	2.97e-93	281
Msa0218050	MtrunA17_Chr2g0292181	44.923	325	171	2	16	332	15	339	3.23e-92	279
Msa0218050	MtrunA17_Chr2g0292261	45.846	325	168	2	16	332	6	330	3.43e-92	278
Msa0218050	MtrunA17_Chr2g0292111	46.254	307	157	2	34	332	24	330	1.85e-91	277
Msa0218050	MtrunA17_Chr2g0291751	45.860	314	162	2	27	332	17	330	3.59e-91	276
Msa0218050	MtrunA17_Chr4g0013721	47.386	306	150	4	34	332	95	396	3.64e-91	278
Msa0218050	MtrunA17_Chr5g0432401	48.254	315	118	7	21	331	12	285	5.53e-91	273
Msa0218050	MtrunA17_Chr5g0400331	47.231	307	148	3	39	332	26	331	9.30e-91	274
Msa0218050	MtrunA17_Chr2g0292241	45.223	314	164	2	27	332	17	330	2.02e-90	274
Msa0218050	MtrunA17_Chr2g0292291	45.092	326	170	3	16	332	7	332	3.76e-90	273
Msa0218050	MtrunA17_Chr2g0292101	46.382	304	155	2	37	332	23	326	1.20e-88	269
Msa0218050	MtrunA17_Chr3g0128061	42.724	323	174	4	20	332	5	326	1.40e-85	261
Msa0218050	MtrunA17_Chr5g0421411	45.965	285	143	5	59	332	1	285	2.85e-85	258
Msa0218050	MtrunA17_Chr6g0477071	39.521	334	192	8	1	332	17	342	1.01e-83	256
Msa0218050	MtrunA17_Chr4g0013821	43.279	305	162	4	35	332	24	324	3.21e-83	255
Msa0218050	MtrunA17_Chr2g0322861	42.633	319	173	4	22	332	70	386	7.74e-80	248
Msa0218050	MtrunA17_Chr4g0024121	40.123	324	182	5	19	332	5	326	1.67e-76	238
Msa0218050	MtrunA17_Chr4g0063671	42.025	326	169	7	21	332	1	320	2.16e-76	237
Msa0218050	MtrunA17_Chr7g0268501	40.752	319	177	4	21	332	7	320	1.82e-74	232
Msa0218050	MtrunA17_Chr7g0268521	40.752	319	177	4	21	332	7	320	1.82e-74	232
Msa0218050	MtrunA17_Chr8g0371381	40.260	308	166	6	34	332	21	319	1.91e-74	232
Msa0218050	MtrunA17_Chr1g0204011	39.130	322	181	8	19	332	8	322	2.18e-74	232
Msa0218050	MtrunA17_Chr2g0279041	42.857	301	155	6	43	332	31	325	3.68e-74	231
Msa0218050	MtrunA17_Chr5g0405991	39.755	327	174	7	15	332	4	316	4.52e-74	231
Msa0218050	MtrunA17_Chr1g0194151	40.240	333	181	7	12	332	7	333	2.69e-73	229
Msa0218050	MtrunA17_Chr1g0148021	40.557	323	178	7	21	332	9	328	3.53e-73	229
Msa0218050	MtrunA17_Chr1g0157051	39.818	329	172	9	13	331	5	317	3.66e-73	229
Msa0218050	MtrunA17_Chr7g0225221	38.199	322	193	4	15	332	1	320	5.54e-72	226
Msa0218050	MtrunA17_Chr5g0401431	38.602	329	189	5	15	331	1	328	2.30e-71	224
Msa0218050	MtrunA17_Chr7g0254201	38.689	305	168	5	37	332	18	312	6.11e-71	223
Msa0218050	MtrunA17_Chr6g0460711	40.252	318	180	5	20	332	2	314	1.80e-70	222
Msa0218050	MtrunA17_Chr1g0188431	38.154	325	189	8	13	332	10	327	2.54e-70	222
Msa0218050	MtrunA17_Chr1g0194271	38.824	340	183	7	12	332	7	340	4.76e-70	221
Msa0218050	MtrunA17_Chr7g0254231	40.068	292	167	6	43	332	26	311	3.13e-69	218
Msa0218050	MtrunA17_Chr1g0164891	42.193	301	162	5	43	332	93	392	3.56e-69	221
Msa0218050	MtrunA17_Chr4g0053871	38.390	323	190	5	14	331	5	323	3.47e-68	216
Msa0218050	MtrunA17_Chr6g0467161	39.506	324	178	8	21	332	19	336	6.37e-68	216
Msa0218050	MtrunA17_Chr4g0046131	38.596	342	193	8	1	330	8	344	1.58e-67	215
Msa0218050	MtrunA17_Chr2g0296621	38.796	299	165	7	42	332	53	341	6.46e-67	213
Msa0218050	MtrunA17_Chr4g0076211	39.394	297	163	6	44	332	46	333	4.72e-66	211
Msa0218050	MtrunA17_Chr3g0136751	36.086	327	195	3	15	332	1	322	2.84e-62	201
Msa0218050	MtrunA17_Chr1g0181511	34.551	301	190	4	37	332	25	323	3.54e-62	201
Msa0218050	MtrunA17_Chr4g0075241	35.430	302	186	4	38	332	28	327	3.67e-62	201
Msa0218050	MtrunA17_Chr2g0316481	37.160	331	166	8	42	332	79	407	4.55e-62	203
Msa0218050	MtrunA17_Chr3g0114461	54.348	184	84	0	149	332	9	192	1.56e-61	194
Msa0218050	MtrunA17_Chr4g0072091	38.206	301	172	5	38	328	23	319	2.66e-61	198
Msa0218050	MtrunA17_Chr2g0316791	36.858	331	167	8	42	332	79	407	2.79e-61	201
Msa0218050	MtrunA17_Chr2g0278671	39.032	310	171	8	35	332	20	323	4.81e-61	197
Msa0218050	MtrunA17_Chr2g0316831	37.576	330	164	9	42	331	115	442	4.96e-61	201
Msa0218050	MtrunA17_Chr6g0467121	39.384	292	169	6	43	332	78	363	5.47e-61	199
Msa0218050	MtrunA17_Chr1g0197411	35.220	318	195	5	25	332	14	330	5.50e-61	198
Msa0218050	MtrunA17_Chr1g0181481	34.884	301	189	4	37	332	25	323	1.18e-59	194
Msa0218050	MtrunA17_Chr2g0316191	35.241	332	172	8	42	332	79	408	1.34e-58	194
Msa0218050	MtrunA17_Chr8g0364291	35.535	318	194	6	24	332	9	324	2.98e-58	191
Msa0218050	MtrunA17_Chr1g0181431	33.555	301	193	4	37	332	25	323	3.01e-58	191
Msa0218050	MtrunA17_Chr2g0279061	43.295	261	131	6	83	332	12	266	3.65e-58	188
Msa0218050	MtrunA17_Chr2g0329641	34.139	331	193	7	21	332	11	335	8.40e-58	190
Msa0218050	MtrunA17_Chr6g0467251	35.168	327	198	7	13	328	1	324	1.07e-56	187
Msa0218050	MtrunA17_Chr6g0451571	34.839	310	185	6	35	332	30	334	1.31e-56	186
Msa0218050	MtrunA17_Chr2g0311241	32.432	370	167	8	42	331	63	429	7.48e-54	182
Msa0218050	MtrunA17_Chr2g0311251	34.347	329	174	8	42	331	14	339	8.85e-54	179
Msa0218050	MtrunA17_Chr4g0074851	33.333	327	203	6	19	332	4	328	2.96e-52	175
Msa0218050	MtrunA17_Chr5g0413051	33.981	309	177	7	43	332	77	377	1.54e-49	169
Msa0218050	MtrunA17_Chr3g0114491	64.220	109	39	0	38	146	17	125	4.55e-44	147
Msa0218050	MtrunA17_Chr2g0292281	40.000	210	106	4	132	332	18	216	1.31e-42	147
Msa0218050	MtrunA17_Chr2g0316141	36.531	271	147	10	85	332	11	279	8.10e-42	146
Msa0218050	MtrunA17_Chr2g0316181	36.531	271	147	10	85	332	11	279	8.10e-42	146
Msa0218050	MtrunA17_Chr2g0316811	35.000	240	130	5	42	257	53	290	5.96e-40	143
Msa0218050	MtrunA17_Chr4g0004591	28.707	317	158	4	42	331	80	355	1.70e-39	142
Msa0218050	MtrunA17_Chr5g0432321	53.846	117	53	1	160	276	17	132	5.17e-36	127
Msa0218050	MtrunA17_Chr5g0432361	52.222	90	41	2	243	331	20	108	1.91e-24	95.9
Msa0218050	MtrunA17_Chr3g0104101	40.411	146	74	7	199	332	5	149	3.66e-24	96.3
Msa0218050	MtrunA17_Chr1g0181491	40.351	114	66	2	36	149	9	120	3.20e-23	94.0
Msa0218050	MtrunA17_Chr1g0181501	30.159	189	125	4	149	332	3	189	6.46e-22	91.7
Msa0218050	MtrunA17_Chr7g0254181	40.000	105	59	2	101	205	22	122	1.57e-19	84.0
Msa0218050	MtrunA17_Chr4g0013811	47.297	74	39	0	150	223	6	79	1.17e-17	76.6
Msa0218050	MtrunA17_Chr6g0468731	51.389	72	31	2	78	149	22	89	1.16e-16	74.3
Msa0218050	MtrunA17_Chr1g0196191	56.716	67	28	1	81	147	27	92	5.73e-16	74.3
Msa0218050	MtrunA17_Chr3g0137751	24.632	272	139	8	54	311	91	310	1.57e-15	76.3
Msa0218050	MtrunA17_Chr2g0316771	28.333	180	89	5	187	328	5	182	1.63e-15	73.9
Msa0218050	MtrunA17_Chr7g0268491	43.529	85	46	1	248	332	15	97	4.79e-13	64.3
Msa0218050	MtrunA17_Chr7g0254171	30.303	132	91	1	85	216	4	134	5.60e-13	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0218050	AT5G05340.1	62.752	298	108	2	37	332	28	324	1.70e-134	385
Msa0218050	AT5G58400.1	55.732	314	135	3	22	332	13	325	2.02e-116	340
Msa0218050	AT5G58390.1	57.188	313	130	3	23	332	5	316	1.79e-115	337
Msa0218050	AT4G36430.1	49.673	306	147	1	34	332	25	330	3.48e-109	322
Msa0218050	AT1G14550.1	50.000	324	150	4	11	332	8	321	1.30e-107	317
Msa0218050	AT5G66390.1	48.788	330	155	2	17	332	4	333	1.40e-107	317
Msa0218050	AT3G50990.1	48.936	329	160	2	12	332	13	341	1.21e-106	315
Msa0218050	AT1G14540.1	48.882	313	159	1	21	332	3	315	6.64e-106	312
Msa0218050	AT2G18140.1	49.834	301	144	1	39	332	35	335	7.79e-106	313
Msa0218050	AT2G18150.1	49.175	303	147	1	37	332	34	336	3.74e-105	311
Msa0218050	AT1G44970.1	52.632	304	136	2	37	332	43	346	4.92e-104	309
Msa0218050	AT1G49570.1	52.703	296	129	4	43	328	52	346	2.43e-103	307
Msa0218050	AT5G06720.1	47.590	332	162	4	12	332	3	333	5.46e-103	306
Msa0218050	AT5G06730.1	46.061	330	161	4	11	332	14	334	6.72e-100	299
Msa0218050	AT3G32980.1	47.975	321	157	3	22	332	14	334	1.42e-98	295
Msa0218050	AT2G38390.1	48.065	310	152	3	32	332	24	333	9.93e-98	293
Msa0218050	AT4G08780.1	48.867	309	146	5	35	332	20	327	2.25e-97	292
Msa0218050	AT5G19890.1	47.368	323	154	5	20	332	11	327	4.14e-96	288
Msa0218050	AT3G49120.1	46.584	322	162	3	21	332	14	335	3.94e-95	286
Msa0218050	AT4G08770.1	47.403	308	152	3	35	332	20	327	6.54e-95	286
Msa0218050	AT3G49110.1	45.342	322	166	3	21	332	15	336	6.61e-93	281
Msa0218050	AT2G38380.1	45.768	319	164	3	23	332	15	333	6.15e-91	275
Msa0218050	AT2G22420.1	43.385	325	171	5	15	332	1	319	8.16e-90	272
Msa0218050	AT4G16270.1	47.138	297	148	3	43	332	54	348	8.76e-89	270
Msa0218050	AT1G68850.1	39.368	348	178	8	1	332	5	335	7.39e-88	267
Msa0218050	AT2G35380.1	44.681	329	162	5	23	332	8	335	2.72e-87	266
Msa0218050	AT5G19880.1	44.720	322	166	4	22	332	9	329	3.97e-84	258
Msa0218050	AT5G15180.1	41.693	319	176	4	21	332	14	329	2.55e-82	253
Msa0218050	AT3G01190.1	40.798	326	180	6	15	332	1	321	1.44e-77	240
Msa0218050	AT3G03670.1	41.956	317	174	4	23	332	8	321	1.95e-77	240
Msa0218050	AT1G05260.1	40.789	304	170	4	37	332	24	325	4.54e-77	239
Msa0218050	AT4G11290.1	40.850	306	173	2	35	332	21	326	9.57e-77	238
Msa0218050	AT5G42180.1	39.752	322	180	6	18	331	1	316	1.21e-75	235
Msa0218050	AT5G64120.1	44.257	296	153	5	43	332	39	328	1.75e-75	235
Msa0218050	AT5G14130.1	40.125	319	179	6	22	332	16	330	2.33e-75	235
Msa0218050	AT5G14130.2	40.125	319	179	6	22	332	57	371	6.59e-75	235
Msa0218050	AT2G41480.1	40.823	316	168	7	30	332	19	328	6.97e-74	231
Msa0218050	AT3G21770.1	39.604	303	173	4	34	328	24	324	2.54e-73	230
Msa0218050	AT1G05240.1	40.132	304	162	6	42	332	29	325	3.71e-73	229
Msa0218050	AT1G05250.1	40.132	304	162	6	42	332	29	325	3.71e-73	229
Msa0218050	AT5G17820.1	40.924	303	161	6	37	332	22	313	1.59e-72	227
Msa0218050	AT5G17820.2	40.924	303	161	6	37	332	75	366	9.00e-72	227
Msa0218050	AT1G71695.1	41.924	291	163	5	42	328	47	335	2.88e-71	225
Msa0218050	AT4G37530.1	39.617	313	168	6	35	332	23	329	1.26e-70	223
Msa0218050	AT4G30170.1	40.909	308	165	7	36	332	24	325	3.37e-70	222
Msa0218050	AT5G67400.1	38.700	323	186	5	21	332	8	329	6.10e-70	221
Msa0218050	AT2G18980.1	39.873	316	175	5	27	332	13	323	6.74e-69	218
Msa0218050	AT5G39580.1	42.088	297	159	6	43	332	29	319	1.04e-68	218
Msa0218050	AT3G49960.1	38.924	316	182	4	27	332	15	329	1.55e-68	218
Msa0218050	AT4G37520.1	37.908	306	179	4	37	332	25	329	1.11e-67	215
Msa0218050	AT3G28200.1	38.411	302	182	4	34	332	16	316	3.49e-67	214
Msa0218050	AT5G40150.1	37.954	303	183	4	34	332	27	328	1.25e-66	213
Msa0218050	AT4G33420.1	39.519	291	169	6	43	332	41	325	6.99e-66	211
Msa0218050	AT1G30870.1	38.585	311	165	8	39	332	44	345	7.24e-66	211
Msa0218050	AT4G37520.2	37.582	306	177	5	37	332	25	326	1.33e-65	210
Msa0218050	AT5G51890.1	37.072	321	183	8	21	332	12	322	1.90e-65	209
Msa0218050	AT4G33420.2	39.519	291	169	6	43	332	88	372	2.65e-65	211
Msa0218050	AT4G26010.1	38.438	320	184	8	15	332	1	309	6.01e-65	207
Msa0218050	AT4G33870.1	34.743	331	168	7	42	328	71	397	9.61e-65	210
Msa0218050	AT2G35380.2	46.939	245	116	4	101	332	4	247	1.11e-64	205
Msa0218050	AT4G26010.2	38.318	321	185	8	14	332	28	337	1.37e-64	207
Msa0218050	AT4G25980.1	36.858	331	191	7	15	332	1	326	2.73e-64	206
Msa0218050	AT5G64110.1	40.361	332	173	8	18	332	7	330	6.64e-64	206
Msa0218050	AT2G34060.1	38.264	311	179	6	32	330	35	344	3.69e-63	204
Msa0218050	AT4G17690.1	37.627	295	179	4	42	332	29	322	1.27e-62	202
Msa0218050	AT5G64100.1	39.333	300	165	6	42	332	40	331	5.37e-62	201
Msa0218050	AT2G39040.1	39.297	313	169	8	36	332	43	350	5.47e-62	201
Msa0218050	AT4G37530.2	41.016	256	141	3	35	280	23	278	9.14e-61	196
Msa0218050	AT1G77100.1	39.450	327	181	11	15	332	1	319	1.46e-60	197
Msa0218050	AT4G31760.1	35.347	331	196	4	11	332	5	326	5.49e-60	195
Msa0218050	AT1G34510.1	37.459	307	184	6	27	332	10	309	3.45e-59	193
Msa0218050	AT5G47000.1	35.737	319	196	5	22	332	13	330	4.71e-59	193
Msa0218050	AT5G22410.1	35.258	329	192	9	13	329	3	322	7.91e-59	192
Msa0218050	AT5G24070.1	36.577	298	170	5	47	332	45	335	2.18e-58	192
Msa0218050	AT2G24800.1	36.275	306	180	4	37	332	29	329	2.99e-58	191
Msa0218050	AT2G43480.1	32.945	343	207	7	5	332	1	335	3.43e-56	186
Msa0218050	AT1G24110.1	35.016	317	195	5	25	332	8	322	2.66e-55	183
Msa0218050	AT2G37130.1	33.974	312	193	7	29	332	21	327	3.79e-54	180
Msa0218050	AT4G21960.1	32.822	326	204	5	20	332	4	327	8.47e-54	179
Msa0218050	AT2G37130.2	33.779	299	186	6	42	332	2	296	1.39e-53	178
Msa0218050	AT3G17070.1	36.452	310	179	9	36	332	35	339	2.03e-53	179
Msa0218050	AT4G25980.2	40.686	204	116	4	4	206	35	234	6.62e-45	155
Msa0218050	AT5G39580.2	41.117	197	107	4	43	239	29	216	2.45e-42	147
Msa0218050	AT3G17070.2	36.604	265	149	10	81	332	18	276	1.60e-40	143
Msa0218050	AT2G24800.2	39.247	186	107	2	37	220	29	210	1.99e-38	137
Msa0218050	AT3G42570.1	37.634	93	57	1	115	206	57	149	2.80e-14	69.7
Msa0218050	AT4G35970.2	27.727	220	104	8	73	281	33	208	3.10e-11	62.8

Find 68 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATATTGTGTTGGAGATTT+TGG	0.083990	2_1:+65089730	Msa0218050:three_prime_UTR
TGTAACAAATAATTTGTTTA+AGG	0.133122	2_1:-65087062	None:intergenic
AAAGCAAATTGTCCTCTTTC+TGG	0.146610	2_1:+65089397	Msa0218050:CDS
TTCTGGTGGTGACACAAATT+TGG	0.219197	2_1:+65089414	Msa0218050:CDS
AGAGACCTTACAGTCCTTTC+TGG	0.248623	2_1:+65089283	Msa0218050:CDS
GATGACACTTCCACCTTTAC+CGG	0.277634	2_1:+65087964	Msa0218050:CDS
TTCTCAATTGTGACCCTGTT+TGG	0.279624	2_1:+65089890	Msa0218050:three_prime_UTR
TGTTGGTTCTCAAGTTTCTT+TGG	0.288110	2_1:+65089540	Msa0218050:CDS
GTTCTCAAGTTTCTTTGGTT+AGG	0.293746	2_1:+65089545	Msa0218050:CDS
TTTCATTGTATATGCGATTT+CGG	0.299036	2_1:-65089342	None:intergenic
CAGAAGCTGGTGAAGGGATT+TGG	0.309796	2_1:-65089213	None:intergenic
GGTCATTTCCCTGCGCACTA+TGG	0.317039	2_1:-65087170	None:intergenic
GGCTTCATTATTGATAGCTT+TGG	0.341495	2_1:-65087191	None:intergenic
CAAGTTCTTCCATAGAAGTT+AGG	0.346883	2_1:-65087133	None:intergenic
TTCTCAAGTTTCTTTGGTTA+GGG	0.349477	2_1:+65089546	Msa0218050:CDS
GTCCTCTCACAGGGACTAAT+GGG	0.352141	2_1:+65089638	Msa0218050:CDS
AGTCCTCTCACAGGGACTAA+TGG	0.352884	2_1:+65089637	Msa0218050:CDS
ATGCACTTGTTTATCCAAAC+AGG	0.355381	2_1:-65089904	None:intergenic
AGGGATCTTGTTGCTAATAA+AGG	0.362589	2_1:+65089484	Msa0218050:CDS
CCCTGCGCACTATGGTTTGA+AGG	0.370381	2_1:-65087162	None:intergenic
ATGTGATGGATCAATCTTAT+TGG	0.376187	2_1:+65087942	Msa0218050:CDS
GTTAGGGCTTATAGTAGAAA+TGG	0.387567	2_1:+65089562	Msa0218050:CDS
TGAATTAATTGATCATGAAT+TGG	0.390705	2_1:+65089686	Msa0218050:exon
ATCAATAATGAAGCCCGAAT+TGG	0.393557	2_1:+65087199	Msa0218050:CDS
GGGAAATTAGAAAGAATTGC+AGG	0.409781	2_1:+65089659	Msa0218050:CDS
AAGTATAGAAGCACCAATTC+GGG	0.411390	2_1:-65087212	None:intergenic
GAAGTATAGAAGCACCAATT+CGG	0.422908	2_1:-65087213	None:intergenic
TAGTTGTTGTCAAAAGTAAC+TGG	0.428640	2_1:-65089457	None:intergenic
CGCACTATGGTTTGAAGGCT+AGG	0.432460	2_1:-65087157	None:intergenic
TTTGGATAATTGATTAAGCA+GGG	0.478241	2_1:+65089748	Msa0218050:three_prime_UTR
TTGACATTCTGCTTGTCCTA+TGG	0.493917	2_1:-65089314	None:intergenic
GCCTTCAAACCATAGTGCGC+AGG	0.498639	2_1:+65087161	Msa0218050:CDS
GTCTTACTTAAATCAATGAA+TGG	0.508065	2_1:+65089815	Msa0218050:three_prime_UTR
CCCTCATGGGTAGTACCACT+TGG	0.511184	2_1:+65089148	Msa0218050:CDS
AAGAGACTTTGCTGTTGCTA+TGG	0.520915	2_1:+65089597	Msa0218050:CDS
CAATTGAATAAATATTGTGT+TGG	0.521150	2_1:+65089721	Msa0218050:three_prime_UTR
CTAGCACTTGCAACTAGAGA+TGG	0.521717	2_1:+65088099	Msa0218050:CDS
AATTAATTTATATAGCTTGG+AGG	0.537880	2_1:+65089124	Msa0218050:intron
TTTGCAAGAAGCTTCAACAC+TGG	0.540754	2_1:-65088052	None:intergenic
CTTGCATCTCTTCTTCCAAG+TGG	0.553652	2_1:-65089163	None:intergenic
TGCAAAGTTTGTGTCAATGT+TGG	0.554512	2_1:-65089365	None:intergenic
TATAGCTTGGAGGACCCTCA+TGG	0.556831	2_1:+65089134	Msa0218050:intron
AACTAGAGATGGAATAGCAC+TGG	0.557344	2_1:+65088110	Msa0218050:CDS
TTTGTGTCACCACCAGAAAG+AGG	0.559647	2_1:-65089409	None:intergenic
AGTAGAATTAGTCCTCTCAC+AGG	0.564035	2_1:+65089628	Msa0218050:CDS
CTTTCTGGTGCACACACCAT+AGG	0.564632	2_1:+65089298	Msa0218050:CDS
GCACTATGGTTTGAAGGCTA+GGG	0.566432	2_1:-65087156	None:intergenic
GTGCACCAGAAAGGACTGTA+AGG	0.568848	2_1:-65089288	None:intergenic
GATAGGTCAGAAGCTGGTGA+AGG	0.571185	2_1:-65089220	None:intergenic
GCAAATTGTCCTCTTTCTGG+TGG	0.573877	2_1:+65089400	Msa0218050:CDS
ACTAAAATGTTTCAAAACAA+AGG	0.575966	2_1:+65089250	Msa0218050:CDS
TGGATAATTGATTAAGCAGG+GGG	0.577614	2_1:+65089750	Msa0218050:three_prime_UTR
TTAATTGATCATGAATTGGA+GGG	0.580275	2_1:+65089690	Msa0218050:exon
CCTTCAAACCATAGTGCGCA+GGG	0.588313	2_1:+65087162	Msa0218050:CDS
ATTAATTGATCATGAATTGG+AGG	0.589702	2_1:+65089689	Msa0218050:exon
TGCACTTGTTTATCCAAACA+GGG	0.591792	2_1:-65089903	None:intergenic
TCCCCATTAGTCCCTGTGAG+AGG	0.604797	2_1:-65089640	None:intergenic
ATAGCTTGGAGGACCCTCAT+GGG	0.605201	2_1:+65089135	Msa0218050:intron
CCAAGTGGTACTACCCATGA+GGG	0.635598	2_1:-65089148	None:intergenic
ATAGGTCAGAAGCTGGTGAA+GGG	0.643236	2_1:-65089219	None:intergenic
TCCAAGTGGTACTACCCATG+AGG	0.651245	2_1:-65089149	None:intergenic
AGTGTGGATAGGTCAGAAGC+TGG	0.662213	2_1:-65089226	None:intergenic
CTATGGTGTGTGCACCAGAA+AGG	0.665212	2_1:-65089297	None:intergenic
AATATCAGCACAAGAGACAG+TGG	0.665482	2_1:-65088076	None:intergenic
TTGGATAATTGATTAAGCAG+GGG	0.667518	2_1:+65089749	Msa0218050:three_prime_UTR
GTAGAATTAGTCCTCTCACA+GGG	0.677991	2_1:+65089629	Msa0218050:CDS
TCCTCTCACAGGGACTAATG+GGG	0.683490	2_1:+65089639	Msa0218050:CDS
ACTGGAGAGACAGAATCAAG+AGG	0.693800	2_1:-65089439	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTCTTTTTGTTTTATTATT+AGG	+	chr2_1:65086680-65086699	Msa0218050:CDS	10.0%
!!!	TATACTCTTTTTAATTTTTA+GGG	-	chr2_1:65086758-65086777	None:intergenic	10.0%
!!!	ATATACTCTTTTTAATTTTT+AGG	-	chr2_1:65086759-65086778	None:intergenic	10.0%
!!!	AGATATTTTTATATTGAATA+TGG	+	chr2_1:65087036-65087055	Msa0218050:intron	10.0%
!!	TTATTCTACATTAAATAAAA+TGG	+	chr2_1:65087619-65087638	Msa0218050:intron	10.0%
!!	TTATGTTTAATTATAAAGAA+TGG	-	chr2_1:65087722-65087741	None:intergenic	10.0%
!!	GAATTAAATTTAACATATTA+AGG	-	chr2_1:65088809-65088828	None:intergenic	10.0%
!!!	TTTTATATTCATTATTGTTA+TGG	+	chr2_1:65089036-65089055	Msa0218050:intron	10.0%
!!	AGATTAATCAATATATATAG+AGG	-	chr2_1:65086947-65086966	None:intergenic	15.0%
!!!	TGTAACAAATAATTTGTTTA+AGG	-	chr2_1:65087065-65087084	None:intergenic	15.0%
!!	TTGTTCTATTGTTAATTTAT+TGG	+	chr2_1:65087412-65087431	Msa0218050:intron	15.0%
!!	TAAAAATAAAAACAGTTTAC+AGG	+	chr2_1:65087850-65087869	Msa0218050:intron	15.0%
!!!	TATTTCTTTGTTTATTTTGT+AGG	+	chr2_1:65087918-65087937	Msa0218050:intron	15.0%
!!!	ATTTCTTTGTTTATTTTGTA+GGG	+	chr2_1:65087919-65087938	Msa0218050:intron	15.0%
!!	AAATATACATGTCTAATAAA+AGG	-	chr2_1:65088158-65088177	None:intergenic	15.0%
!!	ATATAAATTAATTGAAACCA+TGG	-	chr2_1:65089117-65089136	None:intergenic	15.0%
!!	TTCAATTAATTTATATAGCT+TGG	+	chr2_1:65089121-65089140	Msa0218050:intron	15.0%
!!!	TTTTTTTTTTTTTTCTCGAG+AGG	-	chr2_1:65086922-65086941	None:intergenic	20.0%
!!	AATTAGACTATTTGATTATG+TGG	+	chr2_1:65087571-65087590	Msa0218050:intron	20.0%
!!	TTTGTGACAAAAGAAATTAA+AGG	+	chr2_1:65088179-65088198	Msa0218050:intron	20.0%
!!!	TTTTCCTATCATATTGTTTA+TGG	+	chr2_1:65088306-65088325	Msa0218050:intron	20.0%
!!!	TTTTTCTCACATATAATTGA+GGG	+	chr2_1:65088374-65088393	Msa0218050:intron	20.0%
!!	ATCACTCATTATACTTAAAA+AGG	+	chr2_1:65088462-65088481	Msa0218050:intron	20.0%
!!	TATTATGTTTAGTTAGTAGT+TGG	+	chr2_1:65088599-65088618	Msa0218050:intron	20.0%
!!	TTTAACATATTAAGGGTTTA+TGG	-	chr2_1:65088801-65088820	None:intergenic	20.0%
!!	ATATAGTTAGGGAAATTTAT+AGG	-	chr2_1:65088933-65088952	None:intergenic	20.0%
!!!	AATTTGATGACATATAGTTA+GGG	-	chr2_1:65088944-65088963	None:intergenic	20.0%
!!!	AAATTTGATGACATATAGTT+AGG	-	chr2_1:65088945-65088964	None:intergenic	20.0%
!!	AATTAATTTATATAGCTTGG+AGG	+	chr2_1:65089124-65089143	Msa0218050:intron	20.0%
!!	ACTAAAATGTTTCAAAACAA+AGG	+	chr2_1:65089250-65089269	Msa0218050:CDS	20.0%
!!	TGAATTAATTGATCATGAAT+TGG	+	chr2_1:65089686-65089705	Msa0218050:exon	20.0%
!!	CAATTGAATAAATATTGTGT+TGG	+	chr2_1:65089721-65089740	Msa0218050:three_prime_UTR	20.0%
!	TTATTAGGTAAGTCAACTAA+TGG	+	chr2_1:65086695-65086714	Msa0218050:intron	25.0%
!	TATTAGGTAAGTCAACTAAT+GGG	+	chr2_1:65086696-65086715	Msa0218050:intron	25.0%
!	TGAAATAAAGATGAATACGA+TGG	-	chr2_1:65086725-65086744	None:intergenic	25.0%
!	TCACTTAATTATGAAAACTG+TGG	-	chr2_1:65087522-65087541	None:intergenic	25.0%
!	AATTAAGTGAATTGAGCTTT+AGG	+	chr2_1:65087532-65087551	Msa0218050:intron	25.0%
!	ATTGTAATCATACAATTCTC+TGG	+	chr2_1:65088252-65088271	Msa0218050:intron	25.0%
!	AAAAAGTTAAGAAGAGAAAG+TGG	-	chr2_1:65088359-65088378	None:intergenic	25.0%
!!	CTTTTTCTCACATATAATTG+AGG	+	chr2_1:65088373-65088392	Msa0218050:intron	25.0%
!!!	AGCTGGTCTTTTTAATTATT+TGG	-	chr2_1:65088745-65088764	None:intergenic	25.0%
!	TCATGTTTCACATAGAAATA+AGG	-	chr2_1:65088903-65088922	None:intergenic	25.0%
!	TTTCATTGTATATGCGATTT+CGG	-	chr2_1:65089345-65089364	None:intergenic	25.0%
!!	TTTTGACAACAACTACTATA+GGG	+	chr2_1:65089465-65089484	Msa0218050:CDS	25.0%
!	ATTAATTGATCATGAATTGG+AGG	+	chr2_1:65089689-65089708	Msa0218050:exon	25.0%
!	TTAATTGATCATGAATTGGA+GGG	+	chr2_1:65089690-65089709	Msa0218050:exon	25.0%
!!	AAATATTGTGTTGGAGATTT+TGG	+	chr2_1:65089730-65089749	Msa0218050:three_prime_UTR	25.0%
!!	TTTTGGATAATTGATTAAGC+AGG	+	chr2_1:65089747-65089766	Msa0218050:three_prime_UTR	25.0%
!	TTTGGATAATTGATTAAGCA+GGG	+	chr2_1:65089748-65089767	Msa0218050:three_prime_UTR	25.0%
!	GTCTTACTTAAATCAATGAA+TGG	+	chr2_1:65089815-65089834	Msa0218050:three_prime_UTR	25.0%
!	AGGAGACATCTTTGAAAATT+TGG	+	chr2_1:65086792-65086811	Msa0218050:intron	30.0%
!	CATCTTTGAAAATTTGGACA+AGG	+	chr2_1:65086798-65086817	Msa0218050:intron	30.0%
	TGTATATGCCATTATTGTGA+CGG	-	chr2_1:65086886-65086905	None:intergenic	30.0%
	ATTTCCATAACTTCTCTCAT+TGG	+	chr2_1:65086997-65087016	Msa0218050:intron	30.0%
!!	CAACTTTTTCCTAACTTCTA+TGG	+	chr2_1:65087124-65087143	Msa0218050:CDS	30.0%
!	TTTTTGTCCATTATCTCAGA+GGG	-	chr2_1:65087274-65087293	None:intergenic	30.0%
!	ATTTTTGTCCATTATCTCAG+AGG	-	chr2_1:65087275-65087294	None:intergenic	30.0%
	TTATCTCTCACATTCTAACT+AGG	+	chr2_1:65087359-65087378	Msa0218050:intron	30.0%
!!	ACTAGGCTCTATTTTTCATT+TGG	+	chr2_1:65087376-65087395	Msa0218050:intron	30.0%
!!	CTAGGCTCTATTTTTCATTT+GGG	+	chr2_1:65087377-65087396	Msa0218050:intron	30.0%
	CACATAATGAACTACTACAT+TGG	+	chr2_1:65087678-65087697	Msa0218050:intron	30.0%
!!!	TGAACTACTACATTGGTTTT+TGG	+	chr2_1:65087685-65087704	Msa0218050:intron	30.0%
!!!	TTTATTTTGTAGGGATGTGA+TGG	+	chr2_1:65087928-65087947	Msa0218050:intron	30.0%
!!	ATGTGATGGATCAATCTTAT+TGG	+	chr2_1:65087942-65087961	Msa0218050:CDS	30.0%
	TAACTCTTGTCGTTGTATAT+GGG	+	chr2_1:65088406-65088425	Msa0218050:intron	30.0%
	AGTCAACCTTATGTTTACTA+AGG	+	chr2_1:65088533-65088552	Msa0218050:intron	30.0%
	TGATGTCCTTAGTAAACATA+AGG	-	chr2_1:65088542-65088561	None:intergenic	30.0%
	ATAATTAAAAAGACCAGCTC+TGG	+	chr2_1:65088746-65088765	Msa0218050:intron	30.0%
	TAATTAAAAAGACCAGCTCT+GGG	+	chr2_1:65088747-65088766	Msa0218050:intron	30.0%
	TGAATCTCAATAATTCACCA+TGG	+	chr2_1:65089097-65089116	Msa0218050:intron	30.0%
!!	TTGAAACATTTTAGTGAGTG+TGG	-	chr2_1:65089245-65089264	None:intergenic	30.0%
!!	AGGACAATTTGCTTTTCTTA+AGG	-	chr2_1:65089392-65089411	None:intergenic	30.0%
	TAGTTGTTGTCAAAAGTAAC+TGG	-	chr2_1:65089460-65089479	None:intergenic	30.0%
!	CTTTTGACAACAACTACTAT+AGG	+	chr2_1:65089464-65089483	Msa0218050:CDS	30.0%
	TTCTCAAGTTTCTTTGGTTA+GGG	+	chr2_1:65089546-65089565	Msa0218050:CDS	30.0%
	TTGGATAATTGATTAAGCAG+GGG	+	chr2_1:65089749-65089768	Msa0218050:three_prime_UTR	30.0%
!!!	GGATAATGCTTGTTTTATGT+TGG	+	chr2_1:65089836-65089855	Msa0218050:three_prime_UTR	30.0%
!	TTTTTCTCGAGAGGATATTG+TGG	-	chr2_1:65086913-65086932	None:intergenic	35.0%
	AGAGAAGTTATGGAAATGTG+AGG	-	chr2_1:65086994-65087013	None:intergenic	35.0%
	GTTAGGAAAAAGTTGTGCAT+TGG	-	chr2_1:65087119-65087138	None:intergenic	35.0%
	CAAGTTCTTCCATAGAAGTT+AGG	-	chr2_1:65087136-65087155	None:intergenic	35.0%
!	GGCTTCATTATTGATAGCTT+TGG	-	chr2_1:65087194-65087213	None:intergenic	35.0%
	ATCAATAATGAAGCCCGAAT+TGG	+	chr2_1:65087199-65087218	Msa0218050:CDS	35.0%
!!	AAGTATAGAAGCACCAATTC+GGG	-	chr2_1:65087215-65087234	None:intergenic	35.0%
!!	GAAGTATAGAAGCACCAATT+CGG	-	chr2_1:65087216-65087235	None:intergenic	35.0%
	ACCTAACAAAAACTCAGCTA+GGG	+	chr2_1:65088002-65088021	Msa0218050:CDS	35.0%
!!!	AGCTTCAACACTGGTTTTAA+TGG	-	chr2_1:65088046-65088065	None:intergenic	35.0%
	CGTGCCATAAACAATATGAT+AGG	-	chr2_1:65088313-65088332	None:intergenic	35.0%
	AAGTTAAGAAGAGAAAGTGG+CGG	-	chr2_1:65088356-65088375	None:intergenic	35.0%
	CTAACTCTTGTCGTTGTATA+TGG	+	chr2_1:65088405-65088424	Msa0218050:intron	35.0%
	AACTCTTGTCGTTGTATATG+GGG	+	chr2_1:65088407-65088426	Msa0218050:intron	35.0%
	CAACAAAAAATTCGAGAGCA+CGG	+	chr2_1:65088492-65088511	Msa0218050:intron	35.0%
!!	ACATTTTAGTGAGTGTGGAT+AGG	-	chr2_1:65089240-65089259	None:intergenic	35.0%
	TGCAAAGTTTGTGTCAATGT+TGG	-	chr2_1:65089368-65089387	None:intergenic	35.0%
	AAAGCAAATTGTCCTCTTTC+TGG	+	chr2_1:65089397-65089416	Msa0218050:CDS	35.0%
	AGGGATCTTGTTGCTAATAA+AGG	+	chr2_1:65089484-65089503	Msa0218050:CDS	35.0%
!	TCTGATCAAGCTCTTTTCAA+TGG	+	chr2_1:65089517-65089536	Msa0218050:CDS	35.0%
!!	TGTTGGTTCTCAAGTTTCTT+TGG	+	chr2_1:65089540-65089559	Msa0218050:CDS	35.0%
	GTTCTCAAGTTTCTTTGGTT+AGG	+	chr2_1:65089545-65089564	Msa0218050:CDS	35.0%
	GTTAGGGCTTATAGTAGAAA+TGG	+	chr2_1:65089562-65089581	Msa0218050:CDS	35.0%
	GGGAAATTAGAAAGAATTGC+AGG	+	chr2_1:65089659-65089678	Msa0218050:CDS	35.0%
	TGGATAATTGATTAAGCAGG+GGG	+	chr2_1:65089750-65089769	Msa0218050:three_prime_UTR	35.0%
	TGCACTTGTTTATCCAAACA+GGG	-	chr2_1:65089906-65089925	None:intergenic	35.0%
	ATGCACTTGTTTATCCAAAC+AGG	-	chr2_1:65089907-65089926	None:intergenic	35.0%
	AGTATATACAAAGCGCGTAG+AGG	+	chr2_1:65086772-65086791	Msa0218050:intron	40.0%
	GCTACCAATGAGAGAAGTTA+TGG	-	chr2_1:65087004-65087023	None:intergenic	40.0%
!!	TGTAAGTCCCTCTGAGATAA+TGG	+	chr2_1:65087264-65087283	Msa0218050:intron	40.0%
!	ATTTTTCTCACCGGTAAAGG+TGG	-	chr2_1:65087977-65087996	None:intergenic	40.0%
!	AGCTGAGTTTTTGTTAGGTG+CGG	-	chr2_1:65088001-65088020	None:intergenic	40.0%
	CACCTAACAAAAACTCAGCT+AGG	+	chr2_1:65088001-65088020	Msa0218050:CDS	40.0%
	CCTAACAAAAACTCAGCTAG+GGG	+	chr2_1:65088003-65088022	Msa0218050:CDS	40.0%
	TTTGCAAGAAGCTTCAACAC+TGG	-	chr2_1:65088055-65088074	None:intergenic	40.0%
	AATATCAGCACAAGAGACAG+TGG	-	chr2_1:65088079-65088098	None:intergenic	40.0%
	AACTAGAGATGGAATAGCAC+TGG	+	chr2_1:65088110-65088129	Msa0218050:CDS	40.0%
	TTCTCTGGTCATTCTCAAGA+TGG	+	chr2_1:65088267-65088286	Msa0218050:intron	40.0%
	TTGACATTCTGCTTGTCCTA+TGG	-	chr2_1:65089317-65089336	None:intergenic	40.0%
!	TTCTGGTGGTGACACAAATT+TGG	+	chr2_1:65089414-65089433	Msa0218050:CDS	40.0%
!	CAAGCTCTTTTCAATGGTGT+TGG	+	chr2_1:65089523-65089542	Msa0218050:CDS	40.0%
!!	AAGAGACTTTGCTGTTGCTA+TGG	+	chr2_1:65089597-65089616	Msa0218050:CDS	40.0%
	AGTAGAATTAGTCCTCTCAC+AGG	+	chr2_1:65089628-65089647	Msa0218050:CDS	40.0%
	GTAGAATTAGTCCTCTCACA+GGG	+	chr2_1:65089629-65089648	Msa0218050:CDS	40.0%
	TTCTCAATTGTGACCCTGTT+TGG	+	chr2_1:65089890-65089909	Msa0218050:three_prime_UTR	40.0%
	TGCATGCACCGTCACAATAA+TGG	+	chr2_1:65086875-65086894	Msa0218050:intron	45.0%
	GCACTATGGTTTGAAGGCTA+GGG	-	chr2_1:65087159-65087178	None:intergenic	45.0%
	GATGACACTTCCACCTTTAC+CGG	+	chr2_1:65087964-65087983	Msa0218050:CDS	45.0%
!	GGCATTTTTCTCACCGGTAA+AGG	-	chr2_1:65087980-65087999	None:intergenic	45.0%
!	CCCCTAGCTGAGTTTTTGTT+AGG	-	chr2_1:65088006-65088025	None:intergenic	45.0%
	CTAGCACTTGCAACTAGAGA+TGG	+	chr2_1:65088099-65088118	Msa0218050:CDS	45.0%
	TTTGATACTCAACCCAGAGC+TGG	-	chr2_1:65088762-65088781	None:intergenic	45.0%
!	GCTCTGGGTTGAGTATCAAA+TGG	+	chr2_1:65088762-65088781	Msa0218050:intron	45.0%
	CTTGCATCTCTTCTTCCAAG+TGG	-	chr2_1:65089166-65089185	None:intergenic	45.0%
	ATAGGTCAGAAGCTGGTGAA+GGG	-	chr2_1:65089222-65089241	None:intergenic	45.0%
	AGAGACCTTACAGTCCTTTC+TGG	+	chr2_1:65089283-65089302	Msa0218050:CDS	45.0%
	GCAAATTGTCCTCTTTCTGG+TGG	+	chr2_1:65089400-65089419	Msa0218050:CDS	45.0%
	TTTGTGTCACCACCAGAAAG+AGG	-	chr2_1:65089412-65089431	None:intergenic	45.0%
	ACTGGAGAGACAGAATCAAG+AGG	-	chr2_1:65089442-65089461	None:intergenic	45.0%
!!!	TATATTTATCTTTTTTTTTA+AGG	-	chr2_1:65087777-65087796	None:intergenic	5.0%
!!	AATTAAATTTAACATATTAA+GGG	-	chr2_1:65088808-65088827	None:intergenic	5.0%
	GTGACGGTGCATGCATAGTT+AGG	-	chr2_1:65086870-65086889	None:intergenic	50.0%
	CGCACTATGGTTTGAAGGCT+AGG	-	chr2_1:65087160-65087179	None:intergenic	50.0%
	CCTTCAAACCATAGTGCGCA+GGG	+	chr2_1:65087162-65087181	Msa0218050:CDS	50.0%
!	AGGTGCGGCATTTTTCTCAC+CGG	-	chr2_1:65087986-65088005	None:intergenic	50.0%
!!	AGAAAGTGGCGGACATGGTT+TGG	-	chr2_1:65088345-65088364	None:intergenic	50.0%
!!	AGAAGAGAAAGTGGCGGACA+TGG	-	chr2_1:65088350-65088369	None:intergenic	50.0%
	TATAGCTTGGAGGACCCTCA+TGG	+	chr2_1:65089134-65089153	Msa0218050:intron	50.0%
	ATAGCTTGGAGGACCCTCAT+GGG	+	chr2_1:65089135-65089154	Msa0218050:intron	50.0%
	CCAAGTGGTACTACCCATGA+GGG	-	chr2_1:65089151-65089170	None:intergenic	50.0%
	TCCAAGTGGTACTACCCATG+AGG	-	chr2_1:65089152-65089171	None:intergenic	50.0%
	CAGAAGCTGGTGAAGGGATT+TGG	-	chr2_1:65089216-65089235	None:intergenic	50.0%
	GATAGGTCAGAAGCTGGTGA+AGG	-	chr2_1:65089223-65089242	None:intergenic	50.0%
	AGTGTGGATAGGTCAGAAGC+TGG	-	chr2_1:65089229-65089248	None:intergenic	50.0%
	GTGCACCAGAAAGGACTGTA+AGG	-	chr2_1:65089291-65089310	None:intergenic	50.0%
	CTATGGTGTGTGCACCAGAA+AGG	-	chr2_1:65089300-65089319	None:intergenic	50.0%
!	CTTTCTGGTGCACACACCAT+AGG	+	chr2_1:65089298-65089317	Msa0218050:CDS	50.0%
	AGTCCTCTCACAGGGACTAA+TGG	+	chr2_1:65089637-65089656	Msa0218050:CDS	50.0%
	GTCCTCTCACAGGGACTAAT+GGG	+	chr2_1:65089638-65089657	Msa0218050:CDS	50.0%
	TCCTCTCACAGGGACTAATG+GGG	+	chr2_1:65089639-65089658	Msa0218050:CDS	50.0%
	GCAGGGGGTCTAAGTCATAA+AGG	+	chr2_1:65089765-65089784	Msa0218050:three_prime_UTR	50.0%
	GCCTTCAAACCATAGTGCGC+AGG	+	chr2_1:65087161-65087180	Msa0218050:CDS	55.0%
	CCCTGCGCACTATGGTTTGA+AGG	-	chr2_1:65087165-65087184	None:intergenic	55.0%
	GGTCATTTCCCTGCGCACTA+TGG	-	chr2_1:65087173-65087192	None:intergenic	55.0%
	CCCTCATGGGTAGTACCACT+TGG	+	chr2_1:65089148-65089167	Msa0218050:CDS	55.0%
	TCCCCATTAGTCCCTGTGAG+AGG	-	chr2_1:65089643-65089662	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_1	gene	65086677	65089927	65086677	ID=Msa0218050;Name=Msa0218050
chr2_1	mRNA	65086677	65089927	65086677	ID=Msa0218050-mRNA-1;Parent=Msa0218050;Name=Msa0218050-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0\|0.33\|0.25\|1\|0.66\|0.5\|4\|234\|332
chr2_1	exon	65086677	65086701	65086677	ID=Msa0218050-mRNA-1:exon:18107;Parent=Msa0218050-mRNA-1
chr2_1	exon	65087038	65087264	65087038	ID=Msa0218050-mRNA-1:exon:18108;Parent=Msa0218050-mRNA-1
chr2_1	exon	65087940	65088131	65087940	ID=Msa0218050-mRNA-1:exon:18109;Parent=Msa0218050-mRNA-1
chr2_1	exon	65089139	65089927	65089139	ID=Msa0218050-mRNA-1:exon:18110;Parent=Msa0218050-mRNA-1
chr2_1	CDS	65086677	65086701	65086677	ID=Msa0218050-mRNA-1:cds;Parent=Msa0218050-mRNA-1
chr2_1	CDS	65087038	65087264	65087038	ID=Msa0218050-mRNA-1:cds;Parent=Msa0218050-mRNA-1
chr2_1	CDS	65087940	65088131	65087940	ID=Msa0218050-mRNA-1:cds;Parent=Msa0218050-mRNA-1
chr2_1	CDS	65089139	65089693	65089139	ID=Msa0218050-mRNA-1:cds;Parent=Msa0218050-mRNA-1
chr2_1	three_prime_UTR	65089694	65089927	65089694	ID=Msa0218050-mRNA-1:three_prime_utr;Parent=Msa0218050-mRNA-1

Gene Sequence

>Msa0218050

CTTTTTCTTTTTGTTTTATTATTAGATATTTTTATATTGAATATGGTGACCTTAAACAAATTATTTGTTACACTCTCTATTCTTTCTATCTTTGCTTGTTCTACCAATGCACAACTTTTTCCTAACTTCTATGGAAGAACTTGCCCTAGCCTTCAAACCATAGTGCGCAGGGAAATGACCAAAGCTATCAATAATGAAGCCCGAATTGGTGCTTCTATACTTCGTTTGTTCTTTCATGACTGCTTTGTAAATGGATGTGATGGATCAATCTTATTGGATGACACTTCCACCTTTACCGGTGAGAAAAATGCCGCACCTAACAAAAACTCAGCTAGGGGTTTTGAAGTGATTGATACCATTAAAACCAGTGTTGAAGCTTCTTGCAAAGCCACTGTCTCTTGTGCTGATATTCTAGCACTTGCAACTAGAGATGGAATAGCACTGCTTGGAGGACCCTCATGGGTAGTACCACTTGGAAGAAGAGATGCAAGAACAGCAAGTCAAAGTGCAGCAAACAGCCAAATCCCTTCACCAGCTTCTGACCTATCCACACTCACTAAAATGTTTCAAAACAAAGGTCTAACATTAAGAGACCTTACAGTCCTTTCTGGTGCACACACCATAGGACAAGCAGAATGTCAATTTTTCCGAAATCGCATATACAATGAAACCAACATTGACACAAACTTTGCAACCTTAAGAAAAGCAAATTGTCCTCTTTCTGGTGGTGACACAAATTTGGCACCTCTTGATTCTGTCTCTCCAGTTACTTTTGACAACAACTACTATAGGGATCTTGTTGCTAATAAAGGACTTCTTCATTCTGATCAAGCTCTTTTCAATGGTGTTGGTTCTCAAGTTTCTTTGGTTAGGGCTTATAGTAGAAATGGTTTTGCTTTTAGAAGAGACTTTGCTGTTGCTATGGTGAAGATGAGTAGAATTAGTCCTCTCACAGGGACTAATGGGGAAATTAGAAAGAATTGCAGGCTTGTGAATTAA

Protein sequence

>Msa0218050

LFLFVLLLDIFILNMVTLNKLFVTLSILSIFACSTNAQLFPNFYGRTCPSLQTIVRREMTKAINNEARIGASILRLFFHDCFVNGCDGSILLDDTSTFTGEKNAAPNKNSARGFEVIDTIKTSVEASCKATVSCADILALATRDGIALLGGPSWVVPLGRRDARTASQSAANSQIPSPASDLSTLTKMFQNKGLTLRDLTVLSGAHTIGQAECQFFRNRIYNETNIDTNFATLRKANCPLSGGDTNLAPLDSVSPVTFDNNYYRDLVANKGLLHSDQALFNGVGSQVSLVRAYSRNGFAFRRDFAVAMVKMSRISPLTGTNGEIRKNCRLVN*