AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0575470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0575470 MtrunA17_Chr8g0392641 97.403 462 9 1 3 464 76 534 0.0 915
Msa0575470 MtrunA17_Chr6g0483121 82.672 479 65 4 2 464 3 479 0.0 806
Msa0575470 MtrunA17_Chr4g0005781 37.887 388 231 6 73 456 4 385 9.48e-86 271
Msa0575470 MtrunA17_Chr1g0200121 38.402 388 229 6 73 456 4 385 1.35e-84 268
Msa0575470 MtrunA17_Chr1g0200071 38.144 388 230 6 73 456 4 385 2.52e-84 267
Msa0575470 MtrunA17_Chr1g0200091 38.144 388 230 6 73 456 4 385 2.52e-84 267
Msa0575470 MtrunA17_Chr6g0458111 38.144 388 230 6 73 456 4 385 2.94e-84 267
Msa0575470 MtrunA17_Chr6g0458091 38.144 388 230 6 73 456 4 385 2.94e-84 267
Msa0575470 MtrunA17_Chr1g0156421 37.076 383 233 5 77 456 8 385 5.90e-82 261
Msa0575470 MtrunA17_Chr8g0380091 35.214 443 261 10 24 459 237 660 9.84e-78 257
Msa0575470 MtrunA17_Chr1g0193591 35.567 388 240 6 73 456 4 385 4.04e-76 246
Msa0575470 MtrunA17_Chr8g0336511 39.077 325 192 4 64 385 60 381 8.62e-74 238
Msa0575470 MtrunA17_Chr1g0150331 37.326 359 212 7 73 424 4 356 2.42e-73 238
Msa0575470 MtrunA17_Chr8g0340771 36.104 385 236 6 77 456 8 387 2.65e-72 236
Msa0575470 MtrunA17_Chr1g0204031 34.625 387 240 7 73 456 4 380 2.26e-65 226
Msa0575470 MtrunA17_Chr2g0318291 44.444 225 119 4 72 295 5 224 1.64e-58 192
Msa0575470 MtrunA17_Chr1g0196251 29.457 387 239 6 73 456 5 360 2.44e-57 195
Msa0575470 MtrunA17_Chr5g0415391 32.194 351 224 6 112 456 5 347 3.06e-53 185
Msa0575470 MtrunA17_Chr8g0340371 35.950 242 147 5 73 312 4 239 6.40e-43 152
Msa0575470 MtrunA17_Chr2g0319341 31.544 298 194 6 171 463 1 293 4.64e-40 150
Msa0575470 MtrunA17_Chr1g0156411 45.652 138 75 0 77 214 12 149 1.05e-37 135
Msa0575470 MtrunA17_Chr1g0204041 41.447 152 89 0 73 224 4 155 5.47e-35 129
Msa0575470 MtrunA17_Chr2g0298371 29.553 291 178 6 171 456 1 269 2.63e-32 125
Msa0575470 MtrunA17_Chr3g0116821 26.478 389 241 10 73 446 89 447 2.63e-27 114
Msa0575470 MtrunA17_Chr7g0259481 27.665 394 212 15 74 440 61 408 3.30e-27 114
Msa0575470 MtrunA17_Chr2g0287231 29.961 257 121 9 73 314 13 225 2.17e-22 95.9
Msa0575470 MtrunA17_Chr8g0341021 36.190 105 67 0 69 173 1 105 1.99e-19 83.6
Msa0575470 MtrunA17_Chr2g0298381 37.895 95 59 0 74 168 5 99 1.16e-18 81.3
Msa0575470 MtrunA17_Chr1g0210931 38.938 113 63 3 224 333 1 110 1.12e-17 82.8
Msa0575470 MtrunA17_Chr1g0211481 38.272 81 50 0 74 154 4 84 2.42e-14 68.9
Msa0575470 MtrunA17_Chr2g0319351 38.028 71 44 0 74 144 5 75 2.16e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0575470 AT1G18070.1 74.847 489 98 2 1 464 1 489 0.0 747
Msa0575470 AT1G18070.2 74.847 489 98 2 1 464 1 489 0.0 747
Msa0575470 AT1G18070.3 73.200 500 98 3 1 464 1 500 0.0 737
Msa0575470 AT1G07920.1 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT1G07940.4 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT1G07940.1 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT1G07940.2 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT1G07940.3 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT5G60390.3 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT5G60390.1 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT5G60390.2 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT1G07930.1 38.144 388 230 6 73 456 4 385 3.54e-84 267
Msa0575470 AT5G10630.1 36.105 421 252 10 54 464 216 629 6.33e-82 268
Msa0575470 AT5G10630.5 36.105 421 252 10 54 464 217 630 6.46e-82 268
Msa0575470 AT5G10630.2 36.105 421 252 10 54 464 217 630 6.46e-82 268
Msa0575470 AT5G10630.4 36.105 421 252 10 54 464 292 705 3.28e-81 267
Msa0575470 AT5G10630.3 36.105 421 252 10 54 464 287 700 3.34e-81 267
Msa0575470 AT1G07930.2 44.141 256 136 4 73 325 4 255 1.63e-67 221
Msa0575470 AT4G20360.1 25.964 389 243 11 73 446 76 434 4.14e-30 123
Msa0575470 AT4G20360.2 25.964 389 243 11 73 446 76 434 4.14e-30 123
Msa0575470 AT4G02930.1 27.638 398 208 17 74 440 65 413 1.52e-26 112

Find 145 sgRNAs with CRISPR-Local

Find 658 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAACAAGGTTCACCATTT+TGG 0.149732 4_1:-79352123 Msa0575470:CDS
TTCATGGGCTTCTTTGTCTT+TGG 0.167813 4_1:+79349602 None:intergenic
CTTATTTGGCATGATGAAAA+TGG 0.174217 4_1:+79350574 None:intergenic
ATATATCCATTTCGGAAATT+AGG 0.186205 4_1:-79347352 Msa0575470:CDS
AATTTACGCGTTCGATTATC+TGG 0.191475 4_1:-79350388 Msa0575470:CDS
CACTTGAATGTTGTGTTTAT+TGG 0.209036 4_1:-79354224 Msa0575470:CDS
TCTTTGAATTTGTCAATTAT+AGG 0.243891 4_1:+79350653 None:intergenic
TTTCGTTTCGTTTCGTTTGC+AGG 0.247480 4_1:+79356277 None:intergenic
CTATATATATTGATGAAAAT+CGG 0.306807 4_1:-79350435 Msa0575470:CDS
ACAGTACCTGAAAGGTCTTT+TGG 0.308878 4_1:+79350795 None:intergenic
AACTCAGTAACTGCTGATAT+TGG 0.335584 4_1:+79349837 None:intergenic
GCTTGTGGTTGTCAATAAAA+TGG 0.335899 4_1:-79351611 Msa0575470:CDS
GATATAGCAGAAGACATTAA+TGG 0.338752 4_1:-79355295 Msa0575470:intron
ACTTGAATGTTGTGTTTATT+GGG 0.344059 4_1:-79354223 Msa0575470:CDS
GAGATCCCAAAAGACCTTTC+AGG 0.348919 4_1:-79350801 Msa0575470:intron
GATGCACCACTGATCATATT+AGG 0.362256 4_1:+79351875 None:intergenic
ACAGATGGAGTGGCAGCGTT+GGG 0.367829 4_1:-79347401 Msa0575470:CDS
ATATAGCAGAAGACATTAAT+GGG 0.371193 4_1:-79355294 Msa0575470:intron
TAATTTCCGAAATGGATATA+TGG 0.371551 4_1:+79347354 None:intergenic
CAGATACCACAGCTAATCTT+AGG 0.374182 4_1:+79347174 None:intergenic
AAGTTGAATCTGGTACTATT+CGG 0.381513 4_1:-79350607 Msa0575470:CDS
TGAGCCTGAACCTCCTGCTT+TGG 0.382030 4_1:+79354471 None:intergenic
TGTGAATGTGATTGGCATAT+TGG 0.382685 4_1:-79356348 Msa0575470:five_prime_UTR
CCTGTTGCTTCAGTATTATA+CGG 0.384349 4_1:-79347248 Msa0575470:three_prime_UTR
GGTGCATCTCAAGCTGATAT+TGG 0.389282 4_1:-79351860 Msa0575470:CDS
ACTCACAGGTGCATCCAAAA+TGG 0.393834 4_1:+79352109 None:intergenic
TATCCTGATTGCTTTAGAAA+TGG 0.394318 4_1:+79351442 None:intergenic
AGACATGGGAACTGTTGTTA+TGG 0.396475 4_1:-79350633 Msa0575470:CDS
ATGCAACCTAATTTCCGAAA+TGG 0.398201 4_1:+79347346 None:intergenic
TGTTGTATTATGCCGTGTTC+AGG 0.399737 4_1:-79349549 Msa0575470:intron
CGGAAGGGAGAGTTTGAAAC+TGG 0.403475 4_1:-79351700 Msa0575470:CDS
GAACCCATGAGCCCCGATAT+TGG 0.406128 4_1:+79350916 None:intergenic
GACCACTGAGGAAAAGTATC+TGG 0.408471 4_1:+79353120 None:intergenic
AAAGTTCTATTTGTAAAGAA+TGG 0.414531 4_1:-79349575 Msa0575470:CDS
CAGGTACATGGCTTATATTA+TGG 0.421104 4_1:-79352339 Msa0575470:CDS
ATTCCATTTCTAAAGCAATC+AGG 0.422988 4_1:-79351445 Msa0575470:CDS
AGTCTGCCATATATCCATTT+CGG 0.423205 4_1:-79347360 Msa0575470:CDS
AGATCCAAAGCAGGAGGTTC+AGG 0.426022 4_1:-79354475 Msa0575470:CDS
AGTTGAATCTGGTACTATTC+GGG 0.426995 4_1:-79350606 Msa0575470:CDS
TGGACGATCCTACAGTAAAC+TGG 0.432517 4_1:-79351591 Msa0575470:CDS
TGATAGTATCGAAGTTCCTA+TGG 0.435934 4_1:-79350824 Msa0575470:CDS
TTTACCAATATCGGGGCTCA+TGG 0.437076 4_1:-79350920 Msa0575470:CDS
TGGATAGAAGCATTTGTTCA+TGG 0.440243 4_1:-79350876 Msa0575470:CDS
CAACTCTACAAAACTTCATC+AGG 0.440458 4_1:+79347068 None:intergenic
TTTCTTGGGGTAGTCCTCAA+TGG 0.443400 4_1:-79347323 Msa0575470:exon
CAGCACAGCACTGCACTTCA+AGG 0.446774 4_1:+79356253 None:intergenic
GAAAGAATCTTAACCATCCA+TGG 0.449375 4_1:-79356180 Msa0575470:exon
TACTGAGTTTGTTGCTCAGT+TGG 0.450156 4_1:-79349823 Msa0575470:CDS
GACATGGGAACTGTTGTTAT+GGG 0.452289 4_1:-79350632 Msa0575470:CDS
TGTTTGAATGGTAGATATTG+AGG 0.455232 4_1:-79355448 Msa0575470:intron
GTTATGGGCAAAGTTGAATC+TGG 0.463017 4_1:-79350617 Msa0575470:CDS
GATGCTGGCAAGTCTACAAC+TGG 0.465080 4_1:-79353146 Msa0575470:CDS
GACAGATGGAGTGGCAGCGT+TGG 0.466982 4_1:-79347402 Msa0575470:CDS
ATTTCGACGATGAACTGATA+TGG 0.467028 4_1:-79347028 Msa0575470:three_prime_UTR
GCATTTGTTCATGGTGGGAT+GGG 0.469608 4_1:-79350867 Msa0575470:CDS
GAAGAAGAAGACATATTGGC+TGG 0.469904 4_1:-79350361 Msa0575470:CDS
CCGTATAATACTGAAGCAAC+AGG 0.469963 4_1:+79347248 None:intergenic
TATATATATTGATGAAAATC+GGG 0.470910 4_1:-79350434 Msa0575470:CDS
AAGTCGAGCAAACGGAGAAA+AGG 0.471903 4_1:-79354247 Msa0575470:CDS
CATGTGATATATAATTGAAA+TGG 0.474543 4_1:-79347216 Msa0575470:three_prime_UTR
TTCGTTTCGTTTCGTTTGCA+GGG 0.480083 4_1:+79356278 None:intergenic
ACACGTTGTCTAGTAATTCA+AGG 0.482554 4_1:+79349796 None:intergenic
TCTTTACAGCTTGACTCAGC+AGG 0.489167 4_1:-79355414 Msa0575470:intron
CAGGGGAAGACTGTTGAAGT+TGG 0.489807 4_1:-79352167 Msa0575470:CDS
AAAAGGGATGTGAATGTGAT+TGG 0.490051 4_1:-79356356 None:intergenic
AAATTTATATGCCAGGTACA+TGG 0.491683 4_1:-79352351 Msa0575470:intron
GATGGTTAAGATTCTTTCTG+AGG 0.497778 4_1:+79356185 None:intergenic
AGATGAAGAAGTCGAGCAAA+CGG 0.497995 4_1:-79354255 Msa0575470:CDS
AAAGCAGGAGGTTCAGGCTC+AGG 0.498013 4_1:-79354469 Msa0575470:CDS
TAGGAACTTCGATACTATCA+AGG 0.500562 4_1:+79350827 None:intergenic
TTGATTTGTAGCGAAAGATA+AGG 0.502056 4_1:-79354294 Msa0575470:intron
CGGGTTAAACGCGCTGGACC+TGG 0.510881 4_1:-79350415 Msa0575470:CDS
GACTGTTTCAGATCCAAAGC+AGG 0.512619 4_1:-79354484 Msa0575470:intron
CAGTAAACTGGTCAAAAGAA+AGG 0.514638 4_1:-79351579 Msa0575470:intron
CAGTTCATCGTCGAAATACA+CGG 0.518667 4_1:+79347034 None:intergenic
AGCATTTGTTCATGGTGGGA+TGG 0.519536 4_1:-79350868 Msa0575470:CDS
GCTGTTGAGGCCGAGCCAAA+AGG 0.521124 4_1:-79354447 Msa0575470:intron
TCAGGTAATTTCTGCTCGGA+AGG 0.526277 4_1:-79351716 Msa0575470:intron
GGAGAGTTAGTTGTTGCAGC+TGG 0.527750 4_1:-79347302 Msa0575470:three_prime_UTR
TCAAGCTGATATTGGAGTGT+TGG 0.530193 4_1:-79351852 Msa0575470:intron
TATTGATCAATACTGAATCA+TGG 0.530631 4_1:-79346938 Msa0575470:three_prime_UTR
GTTGTGTTTATTGGGCATGT+TGG 0.533975 4_1:-79354215 Msa0575470:intron
TGTTGATAATGTTGATAAGA+TGG 0.534035 4_1:-79355242 Msa0575470:CDS
GTTAAGATTCTTTCTGAGGG+AGG 0.535575 4_1:+79356189 None:intergenic
TGTTGAAGAAGAAGACATAT+TGG 0.539132 4_1:-79350365 Msa0575470:CDS
ACTTCTTCATCTTGAACAGA+AGG 0.541085 4_1:+79354266 None:intergenic
TTTGAAACTGGATATGAGAG+AGG 0.541153 4_1:-79351688 Msa0575470:CDS
CTGAAACGAGCTTCGTAGGA+TGG 0.541192 4_1:-79346964 Msa0575470:three_prime_UTR
GAAAATCGGGTTAAACGCGC+TGG 0.544322 4_1:-79350421 Msa0575470:CDS
AATGTTGATAAGATGGATGA+AGG 0.544900 4_1:-79355235 Msa0575470:intron
TTAAGATTCTTTCTGAGGGA+GGG 0.548014 4_1:+79356190 None:intergenic
TTACCAATATCGGGGCTCAT+GGG 0.548856 4_1:-79350919 Msa0575470:CDS
GGCATTTCTGCAGAGACAGA+TGG 0.549533 4_1:-79347416 Msa0575470:intron
GGGTTCGTCTTGTCTAGTGT+TGG 0.550042 4_1:-79350340 Msa0575470:intron
TACGGACGCATACAAGTACA+TGG 0.550496 4_1:+79347276 None:intergenic
AGGACAAAAGTCGAGAAAGC+TGG 0.550645 4_1:-79353055 Msa0575470:intron
TATTAGGAACATAGCTCTTG+TGG 0.554344 4_1:+79351891 None:intergenic
AATTGACAAATTCAAAGACA+TGG 0.557832 4_1:-79350648 Msa0575470:CDS
CTGAAGCAACAGGTCTTGTA+CGG 0.559549 4_1:+79347258 None:intergenic
GGTTCAGGCTCAGGCTGTTG+AGG 0.561412 4_1:-79354460 Msa0575470:CDS
AAAATACGAGAAAGAAGCTA+AGG 0.561519 4_1:-79353075 Msa0575470:CDS
GGGTGTGACTAAGCTGCTTG+TGG 0.573585 4_1:-79351626 Msa0575470:CDS
ACTACTGAAACGAGCTTCGT+AGG 0.573897 4_1:-79346968 Msa0575470:three_prime_UTR
GCACATCCACTCTGTAGTTG+AGG 0.575114 4_1:-79349660 Msa0575470:CDS
ATGGTTAAGATTCTTTCTGA+GGG 0.578859 4_1:+79356186 None:intergenic
AGCACAGCACTGCACTTCAA+GGG 0.581023 4_1:+79356254 None:intergenic
AAATGAGGAGGAGAGAGTAA+AGG 0.581613 4_1:-79352312 Msa0575470:intron
AAAACTTCATCAGGTATACT+CGG 0.589473 4_1:+79347077 None:intergenic
TTATATTATGGACACAAATG+AGG 0.594698 4_1:-79352327 Msa0575470:CDS
AGATTCTTTCTGAGGGAGGG+AGG 0.594716 4_1:+79356193 None:intergenic
TCAATCAGGTAATTTCTGCT+CGG 0.598965 4_1:-79351720 Msa0575470:intron
AAGAAGAAGACATATTGGCT+GGG 0.601167 4_1:-79350360 Msa0575470:CDS
GATAGTATCGAAGTTCCTAT+GGG 0.604305 4_1:-79350823 Msa0575470:CDS
TTCTGCAGAGACAGATGGAG+TGG 0.604814 4_1:-79347411 Msa0575470:intron
ATTGACAAATTCAAAGACAT+GGG 0.606716 4_1:-79350647 Msa0575470:CDS
TTGGGGCATAATTGACAGCA+TGG 0.609163 4_1:-79347383 Msa0575470:CDS
CAGATGGAGTGGCAGCGTTG+GGG 0.611952 4_1:-79347400 Msa0575470:CDS
CAGGTAATTTCTGCTCGGAA+GGG 0.612686 4_1:-79351715 Msa0575470:CDS
ATACCACAGCTAATCTTAGG+TGG 0.613574 4_1:+79347177 None:intergenic
TAGAAGCATTTGTTCATGGT+GGG 0.615928 4_1:-79350872 Msa0575470:CDS
TTAGAAATACAGTACCTGAA+AGG 0.621965 4_1:+79350787 None:intergenic
AGCAGAAGACATTAATGGGG+TGG 0.623607 4_1:-79355290 Msa0575470:intron
AAAGAATCTTAACCATCCAT+GGG 0.624293 4_1:-79356179 Msa0575470:intron
TCAAGGGCTTCAAATAAGCA+AGG 0.633378 4_1:+79350844 None:intergenic
TATGTTCCTAATATGATCAG+TGG 0.635810 4_1:-79351881 Msa0575470:CDS
GAACGTAACGTACCCATGGA+TGG 0.637224 4_1:+79356167 None:intergenic
TGATATATAATTGAAATGGA+TGG 0.641815 4_1:-79347212 Msa0575470:three_prime_UTR
GAATCTGGTACTATTCGGGA+GGG 0.642713 4_1:-79350602 Msa0575470:CDS
TTGAATGGTAGATATTGAGG+AGG 0.642938 4_1:-79355445 Msa0575470:intron
TGAATCTGGTACTATTCGGG+AGG 0.643294 4_1:-79350603 Msa0575470:CDS
GCTGGCAAGTCTACAACTGG+AGG 0.646837 4_1:-79353143 Msa0575470:CDS
AGGAACTTCGATACTATCAA+GGG 0.651603 4_1:+79350828 None:intergenic
GAAACTGGATATGAGAGAGG+TGG 0.654114 4_1:-79351685 Msa0575470:CDS
TGTTTCAGATCCAAAGCAGG+AGG 0.654241 4_1:-79354481 Msa0575470:intron
AGACATAACGAACTTTAGAG+TGG 0.655502 4_1:-79346895 Msa0575470:three_prime_UTR
ATAGAAGCATTTGTTCATGG+TGG 0.659258 4_1:-79350873 Msa0575470:CDS
CACATTCCTCAACTACAGAG+TGG 0.659521 4_1:+79349654 None:intergenic
TATTATGGACACAAATGAGG+AGG 0.661413 4_1:-79352324 Msa0575470:CDS
GATCCACCTAAGATTAGCTG+TGG 0.661851 4_1:-79347180 Msa0575470:three_prime_UTR
AAATTTAACGTATAGAAATG+CGG 0.669776 4_1:-79347001 Msa0575470:three_prime_UTR
AGTTCATCGTCGAAATACAC+GGG 0.685859 4_1:+79347035 None:intergenic
CAACAACTAACTCTCCATTG+AGG 0.714550 4_1:+79347309 None:intergenic
TATAGCAGAAGACATTAATG+GGG 0.734555 4_1:-79355293 Msa0575470:intron
ACGGACGCATACAAGTACAT+GGG 0.749847 4_1:+79347277 None:intergenic
GATCATCAACCTGACCACTG+AGG 0.782429 4_1:+79353108 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAAATATTTTATATTTT+AGG + chr4_1:79355606-79355625 None:intergenic 0.0%
!!! CTTCATTTATAATTAATTTT+TGG - chr4_1:79347423-79347442 Msa0575470:intron 10.0%
!!! TCATTTATAATTAATTTTTG+GGG - chr4_1:79347425-79347444 Msa0575470:intron 10.0%
!! AAAAAATCCATTAATTAAAA+AGG + chr4_1:79347603-79347622 None:intergenic 10.0%
!!! TTTGATTATTTTATTTTTGT+CGG + chr4_1:79347676-79347695 None:intergenic 10.0%
!!! TTGTTTTGTTTTATTAATAT+GGG - chr4_1:79349441-79349460 Msa0575470:intron 10.0%
!!! ATATAGAATAATTTTAGATT+AGG + chr4_1:79349776-79349795 None:intergenic 10.0%
!! AAAAGGAAAAACAAAAATAT+GGG + chr4_1:79347586-79347605 None:intergenic 15.0%
!! AAAAAGGAAAAACAAAAATA+TGG + chr4_1:79347587-79347606 None:intergenic 15.0%
!!! TGTTTTTCCTTTTTAATTAA+TGG - chr4_1:79347593-79347612 Msa0575470:intron 15.0%
!!! TTGATTATTTTATTTTTGTC+GGG + chr4_1:79347675-79347694 None:intergenic 15.0%
!!! TGAAAATAAAAATTTTCAGA+GGG + chr4_1:79349303-79349322 None:intergenic 15.0%
!!! TTGAAAATAAAAATTTTCAG+AGG + chr4_1:79349304-79349323 None:intergenic 15.0%
!!! CTTGTTTTGTTTTATTAATA+TGG - chr4_1:79349440-79349459 Msa0575470:intron 15.0%
!! TTATTCTTATATTGATGAAT+GGG + chr4_1:79349879-79349898 None:intergenic 15.0%
!! ATATGAAAAAAGAAAATAAC+AGG + chr4_1:79349912-79349931 None:intergenic 15.0%
!! GCATAAAAAATGTAAATATT+AGG + chr4_1:79351326-79351345 None:intergenic 15.0%
!!! AATATTTACATTTTTTATGC+AGG - chr4_1:79351326-79351345 Msa0575470:intron 15.0%
!!! ATATTTACATTTTTTATGCA+GGG - chr4_1:79351327-79351346 Msa0575470:intron 15.0%
!! TATAAATGCATTATAAATAG+TGG - chr4_1:79351919-79351938 Msa0575470:intron 15.0%
!! ATAAATGCATTATAAATAGT+GGG - chr4_1:79351920-79351939 Msa0575470:intron 15.0%
!! AAGACAAAATATGAAATTAT+TGG + chr4_1:79352234-79352253 None:intergenic 15.0%
!! TTCAAAATACAGAATTATAA+AGG + chr4_1:79352516-79352535 None:intergenic 15.0%
!! CTATATATATTGATGAAAAT+CGG - chr4_1:79352806-79352825 Msa0575470:intron 15.0%
!! TATATATATTGATGAAAATC+GGG - chr4_1:79352807-79352826 Msa0575470:intron 15.0%
!! AATTTATCCATAAATTATTG+TGG - chr4_1:79353202-79353221 Msa0575470:intron 15.0%
!! ATTTATCCATAAATTATTGT+GGG - chr4_1:79353203-79353222 Msa0575470:intron 15.0%
!!! ATTTTATCTTTTTTTATTGG+TGG - chr4_1:79353744-79353763 Msa0575470:intron 15.0%
!! TTTACAGTCTATAATAAATA+TGG - chr4_1:79354343-79354362 Msa0575470:intron 15.0%
!!! TGAAAAATAAAAACTTTTGA+AGG + chr4_1:79355074-79355093 None:intergenic 15.0%
!! ATTAATTTCCTATTCTATTA+CGG + chr4_1:79355705-79355724 None:intergenic 15.0%
!!! ATATTTTAGAATAACAACAA+TGG - chr4_1:79356097-79356116 Msa0575470:intron 15.0%
!!! CAAAATAAGAGTATGAAAAA+CGG + chr4_1:79347192-79347211 None:intergenic 20.0%
!!! CATTTCTAGTGTTAATTTAA+TGG - chr4_1:79347263-79347282 Msa0575470:three_prime_UTR 20.0%
!! AAAGGAAAAACAAAAATATG+GGG + chr4_1:79347585-79347604 None:intergenic 20.0%
!! GGTATTATTATAGAATCAAA+AGG + chr4_1:79347654-79347673 None:intergenic 20.0%
!!! AATCAAAAGTTTTTTCTTTG+AGG - chr4_1:79347723-79347742 Msa0575470:intron 20.0%
!!! TTATGTTTGTTTTGTTTGAA+TGG - chr4_1:79347781-79347800 Msa0575470:intron 20.0%
!! AGAAAATATAAACATGAAAC+TGG + chr4_1:79348075-79348094 None:intergenic 20.0%
!!! TTGTCATTATCAATTTCTTT+TGG - chr4_1:79348184-79348203 Msa0575470:intron 20.0%
!! TTCAAAAATGATTGTGTTAA+GGG + chr4_1:79348252-79348271 None:intergenic 20.0%
!! ATTCAAAAATGATTGTGTTA+AGG + chr4_1:79348253-79348272 None:intergenic 20.0%
!! CTTAAAAGATATTATAGAAG+TGG - chr4_1:79348337-79348356 Msa0575470:intron 20.0%
!!! ATGAAATGAATTTTAGATGT+TGG - chr4_1:79349228-79349247 Msa0575470:intron 20.0%
!!! TTTTGTTTTATTAATATGGG+AGG - chr4_1:79349444-79349463 Msa0575470:intron 20.0%
!!! CAATTTCTTTTATGATGTTT+CGG - chr4_1:79349472-79349491 Msa0575470:intron 20.0%
!! CTTATTCTTATATTGATGAA+TGG + chr4_1:79349880-79349899 None:intergenic 20.0%
!! ATTGGCTATTTAAGTATTAT+GGG - chr4_1:79349967-79349986 Msa0575470:intron 20.0%
!! AAAAGTCGTATAATTTATGT+TGG - chr4_1:79350358-79350377 Msa0575470:CDS 20.0%
!! TTTATGATAGAGAAACTATT+AGG - chr4_1:79350485-79350504 Msa0575470:intron 20.0%
!! AACTATTGTTGAGAATATTA+AGG - chr4_1:79350688-79350707 Msa0575470:intron 20.0%
!! ACTATTGTTGAGAATATTAA+GGG - chr4_1:79350689-79350708 Msa0575470:intron 20.0%
!! TAAATTAAGTAATCTCAAAC+AGG + chr4_1:79350766-79350785 None:intergenic 20.0%
!! AGTATATTAACTAAGCTAAA+AGG + chr4_1:79350839-79350858 None:intergenic 20.0%
!!! ACTTTTAGTCAGAAAAAAAT+GGG + chr4_1:79351233-79351252 None:intergenic 20.0%
!!! ACATATTTTTTTGCTAACAT+AGG - chr4_1:79351295-79351314 Msa0575470:intron 20.0%
!!! TTTTATTTGCTTAAGAATGT+GGG - chr4_1:79351848-79351867 Msa0575470:intron 20.0%
!!! TATTTACTTTTAGGAAAGTT+AGG - chr4_1:79352119-79352138 Msa0575470:CDS 20.0%
!! TTCAAACTTAAAAACAAGAA+TGG - chr4_1:79352345-79352364 Msa0575470:intron 20.0%
!!! TTCTGTTTATTTAATTTTGC+TGG - chr4_1:79352938-79352957 Msa0575470:intron 20.0%
!!! TTTTCAATAAAATGTACTGT+TGG + chr4_1:79352981-79353000 None:intergenic 20.0%
!!! TTTAGAAGTATTTCATTTCT+TGG - chr4_1:79353061-79353080 Msa0575470:CDS 20.0%
!!! AATTTGAAATTGTTTGGAAT+GGG + chr4_1:79353159-79353178 None:intergenic 20.0%
!! TTTAAACCCACAATAATTTA+TGG + chr4_1:79353212-79353231 None:intergenic 20.0%
!!! AATAGAACTTTCTTTTTCAT+GGG + chr4_1:79353657-79353676 None:intergenic 20.0%
!!! AAATAGAACTTTCTTTTTCA+TGG + chr4_1:79353658-79353677 None:intergenic 20.0%
!! AAAGTTCTATTTGTAAAGAA+TGG - chr4_1:79353666-79353685 Msa0575470:intron 20.0%
!! GACAATATTAAAAGATACAA+TGG - chr4_1:79353796-79353815 Msa0575470:intron 20.0%
!! TATTAAAAGATACAATGGTT+TGG - chr4_1:79353801-79353820 Msa0575470:intron 20.0%
!!! TTAATATTAGAGGTACAAAA+TGG + chr4_1:79353938-79353957 None:intergenic 20.0%
!! TTTATTATAGACTGTAAAGA+AGG + chr4_1:79354341-79354360 None:intergenic 20.0%
!! TAAGGATTCAAAAATGAAAA+GGG + chr4_1:79355104-79355123 None:intergenic 20.0%
!! TTAAGGATTCAAAAATGAAA+AGG + chr4_1:79355105-79355124 None:intergenic 20.0%
!!! AGTTTATTTACATCTTGTTT+TGG - chr4_1:79355172-79355191 Msa0575470:intron 20.0%
!!! TTTGTAATTTTTTTGACTTG+AGG - chr4_1:79355410-79355429 Msa0575470:intron 20.0%
!! TTGATTATGCTAACATTTAT+TGG - chr4_1:79355518-79355537 Msa0575470:intron 20.0%
!! TGATTATGCTAACATTTATT+GGG - chr4_1:79355519-79355538 Msa0575470:intron 20.0%
!!! GAAATGTCAGTTTTAATTTA+TGG - chr4_1:79355753-79355772 Msa0575470:intron 20.0%
!! TAGTGAATTTGAAAAAACAA+AGG + chr4_1:79355785-79355804 None:intergenic 20.0%
!! CATGTGATATATAATTGAAA+TGG - chr4_1:79356025-79356044 Msa0575470:intron 20.0%
!! TGATATATAATTGAAATGGA+TGG - chr4_1:79356029-79356048 Msa0575470:intron 20.0%
!! AAATTTAACGTATAGAAATG+CGG - chr4_1:79356240-79356259 Msa0575470:five_prime_UTR 20.0%
! AAGGAAAAACAAAAATATGG+GGG + chr4_1:79347584-79347603 None:intergenic 25.0%
!!! GTTTTTTCTTTGAGGTTTTA+AGG - chr4_1:79347731-79347750 Msa0575470:intron 25.0%
! TGCTATATCATAATCAAGAT+TGG + chr4_1:79347935-79347954 None:intergenic 25.0%
! ATATAGCAGAAGACATTAAT+GGG - chr4_1:79347947-79347966 Msa0575470:intron 25.0%
!!! TGTTGATAATGTTGATAAGA+TGG - chr4_1:79347999-79348018 Msa0575470:intron 25.0%
!! CATGTTTATATTTTCTGTGA+AGG - chr4_1:79348079-79348098 Msa0575470:intron 25.0%
! TCAAAAATGATTGTGTTAAG+GGG + chr4_1:79348251-79348270 None:intergenic 25.0%
! ATGTAAAACTTTATTCCCAA+CGG - chr4_1:79348300-79348319 Msa0575470:intron 25.0%
! TTGTTACAATCATGTACTTA+TGG - chr4_1:79348404-79348423 Msa0575470:intron 25.0%
! TTCACGACAATAGAAATAAT+AGG + chr4_1:79348564-79348583 None:intergenic 25.0%
!!! TTCATTGTCGATTGTTTTAT+TGG - chr4_1:79348646-79348665 Msa0575470:intron 25.0%
!! AAATACATTCCAATACCTTT+TGG + chr4_1:79348812-79348831 None:intergenic 25.0%
! AATGGATCTGATATCTTAAT+TGG + chr4_1:79348905-79348924 None:intergenic 25.0%
! ACTTGAATGTTGTGTTTATT+GGG - chr4_1:79349018-79349037 Msa0575470:intron 25.0%
! AAGAGATAACCTATATATAC+TGG + chr4_1:79349082-79349101 None:intergenic 25.0%
! TATATAGGTTATCTCTTATC+AGG - chr4_1:79349085-79349104 Msa0575470:intron 25.0%
! ATATAGGTTATCTCTTATCA+GGG - chr4_1:79349086-79349105 Msa0575470:intron 25.0%
! GATTGAATTTAAATGTCCAT+TGG - chr4_1:79349194-79349213 Msa0575470:intron 25.0%
! ACTAGACATATACAGATTAT+AGG + chr4_1:79349404-79349423 None:intergenic 25.0%
! CTCATATTATTAAACATGTG+AGG - chr4_1:79349546-79349565 Msa0575470:intron 25.0%
! GAAAAACAAAGCTTAAAAGA+GGG - chr4_1:79349691-79349710 Msa0575470:CDS 25.0%
! TATATCAATACATTTGTCTC+AGG - chr4_1:79349929-79349948 Msa0575470:intron 25.0%
! AGGTTTAATCTACAATTCAT+TGG - chr4_1:79349949-79349968 Msa0575470:intron 25.0%
!! CATTGGCTATTTAAGTATTA+TGG - chr4_1:79349966-79349985 Msa0575470:intron 25.0%
!! CTTTTAGTATAATGTTCTAG+TGG - chr4_1:79350045-79350064 Msa0575470:intron 25.0%
!!! ATCTTGAACAGTTTTTAAGT+TGG - chr4_1:79350450-79350469 Msa0575470:CDS 25.0%
!!! TTTTAAGTTGGATCCAAATA+TGG - chr4_1:79350462-79350481 Msa0575470:intron 25.0%
! TCTCTATCATAAACCATATT+TGG + chr4_1:79350478-79350497 None:intergenic 25.0%
! AACTATTAGGAAAGATTTAG+AGG - chr4_1:79350498-79350517 Msa0575470:intron 25.0%
! TAATGAGTTGTATCCAAATA+TGG - chr4_1:79350522-79350541 Msa0575470:intron 25.0%
!! TGATTTGAAATTTATATGCC+AGG - chr4_1:79350883-79350902 Msa0575470:CDS 25.0%
! TTATATTATGGACACAAATG+AGG - chr4_1:79350914-79350933 Msa0575470:CDS 25.0%
!! ATTTGCTGATAACGTTTAAT+TGG - chr4_1:79350961-79350980 Msa0575470:intron 25.0%
! ATATGACTAACAAACAAAAG+TGG + chr4_1:79351010-79351029 None:intergenic 25.0%
! AGTAAAGTTATGCTAATTAC+AGG - chr4_1:79351055-79351074 Msa0575470:intron 25.0%
! GTAAAGTTATGCTAATTACA+GGG - chr4_1:79351056-79351075 Msa0575470:intron 25.0%
! TAAAGTTATGCTAATTACAG+GGG - chr4_1:79351057-79351076 Msa0575470:intron 25.0%
!! GACTTTTAGTCAGAAAAAAA+TGG + chr4_1:79351234-79351253 None:intergenic 25.0%
! ATACTATGACAATTAAGTCA+AGG + chr4_1:79351260-79351279 None:intergenic 25.0%
! AATTGCATATAAGCTCATAA+AGG + chr4_1:79351717-79351736 None:intergenic 25.0%
!!! AGAAGATACCTTTTTTTACA+TGG + chr4_1:79351825-79351844 None:intergenic 25.0%
! CACATTCTTAAGCAAATAAA+AGG + chr4_1:79351849-79351868 None:intergenic 25.0%
!!! CTTTTATTTGCTTAAGAATG+TGG - chr4_1:79351847-79351866 Msa0575470:intron 25.0%
!!! GTTAATGTTGCTTTAACATT+AGG - chr4_1:79351945-79351964 Msa0575470:intron 25.0%
!!! GAGAAGCTTTATTTACTTTT+AGG - chr4_1:79352110-79352129 Msa0575470:intron 25.0%
!!! TGTCTTGTTTTTACCAATAT+CGG - chr4_1:79352312-79352331 Msa0575470:intron 25.0%
! ATTGACAAATTCAAAGACAT+GGG - chr4_1:79352594-79352613 Msa0575470:intron 25.0%
!! CAAATAAGGTAGTCTTTTTA+GGG - chr4_1:79352682-79352701 Msa0575470:intron 25.0%
!! CAATTTGAAATTGTTTGGAA+TGG + chr4_1:79353160-79353179 None:intergenic 25.0%
!! CAACACAATTTGAAATTGTT+TGG + chr4_1:79353165-79353184 None:intergenic 25.0%
! TTGATTATAATGATTCCAGA+TGG - chr4_1:79353241-79353260 Msa0575470:intron 25.0%
!!! TCTTTTGTTTGGCTAAAAAT+TGG - chr4_1:79353771-79353790 Msa0575470:intron 25.0%
! TAACTGTTATATTCTGTTAG+CGG - chr4_1:79353856-79353875 Msa0575470:intron 25.0%
! CTTCACTGAATTAATATTAG+AGG + chr4_1:79353948-79353967 None:intergenic 25.0%
! AAGTAATTCCTCATAGTATT+TGG - chr4_1:79353965-79353984 Msa0575470:intron 25.0%
! AACTAAATAGAGGTTATAAG+GGG + chr4_1:79354036-79354055 None:intergenic 25.0%
! CAACTAAATAGAGGTTATAA+GGG + chr4_1:79354037-79354056 None:intergenic 25.0%
! TCAACTAAATAGAGGTTATA+AGG + chr4_1:79354038-79354057 None:intergenic 25.0%
!!! AATTCTATATGCTAGCTTTT+GGG - chr4_1:79354200-79354219 Msa0575470:intron 25.0%
! AGTCTATATCACTATCTAAT+TGG - chr4_1:79354266-79354285 Msa0575470:CDS 25.0%
! GTCTATATCACTATCTAATT+GGG - chr4_1:79354267-79354286 Msa0575470:CDS 25.0%
! ATGGATGAACCTTAAAATAT+AGG + chr4_1:79354377-79354396 None:intergenic 25.0%
!!! TATATTTTAAGGTTCATCCA+TGG - chr4_1:79354376-79354395 Msa0575470:intron 25.0%
! GATGACAAAATATCTTAGTT+TGG - chr4_1:79354532-79354551 Msa0575470:intron 25.0%
!! AAATATCTTAGTTTGGAATC+AGG - chr4_1:79354539-79354558 Msa0575470:intron 25.0%
!!! TAGTTTTTTTTCCTTTCATC+CGG - chr4_1:79354957-79354976 Msa0575470:intron 25.0%
!!! TTCATTTTTGAATCCTTAAC+AGG - chr4_1:79355106-79355125 Msa0575470:intron 25.0%
! ATGTTAGCATAATCAAACTA+TGG + chr4_1:79355514-79355533 None:intergenic 25.0%
! TCTAGATACATTGTTTGATT+TGG - chr4_1:79355555-79355574 Msa0575470:intron 25.0%
!! TGATTTTACCGTAATAGAAT+AGG - chr4_1:79355694-79355713 Msa0575470:intron 25.0%
! TAATTTCCGAAATGGATATA+TGG + chr4_1:79355890-79355909 None:intergenic 25.0%
! ATATATCCATTTCGGAAATT+AGG - chr4_1:79355889-79355908 Msa0575470:intron 25.0%
!!! AAATTAGGTTGCATTTTCTT+GGG - chr4_1:79355904-79355923 Msa0575470:intron 25.0%
! TATTGATCAATACTGAATCA+TGG - chr4_1:79356303-79356322 Msa0575470:five_prime_UTR 25.0%
ATGGTTAAGATTCTTTCTGA+GGG + chr4_1:79347058-79347077 None:intergenic 30.0%
AAAGAATCTTAACCATCCAT+GGG - chr4_1:79347062-79347081 Msa0575470:three_prime_UTR 30.0%
AGGATATAACAAATTGGTAG+TGG + chr4_1:79347107-79347126 None:intergenic 30.0%
GAGAAGAGGATATAACAAAT+TGG + chr4_1:79347113-79347132 None:intergenic 30.0%
TAAAATGAATTGCAGAGAAG+AGG + chr4_1:79347127-79347146 None:intergenic 30.0%
ATTAAGACTGTCCATAAGTT+GGG + chr4_1:79347525-79347544 None:intergenic 30.0%
AATTAAGACTGTCCATAAGT+TGG + chr4_1:79347526-79347545 None:intergenic 30.0%
TGTTTGAATGGTAGATATTG+AGG - chr4_1:79347793-79347812 Msa0575470:intron 30.0%
GATATAGCAGAAGACATTAA+TGG - chr4_1:79347946-79347965 Msa0575470:intron 30.0%
TATAGCAGAAGACATTAATG+GGG - chr4_1:79347948-79347967 Msa0575470:intron 30.0%
! AATGTTGATAAGATGGATGA+AGG - chr4_1:79348006-79348025 Msa0575470:intron 30.0%
CTATTGTAAGAAGCAGAAAA+AGG + chr4_1:79348216-79348235 None:intergenic 30.0%
TTCTCAATTGTTCAGAAAGA+TGG - chr4_1:79348272-79348291 Msa0575470:intron 30.0%
AACAAGAGACCTTAAGAAAA+AGG + chr4_1:79348389-79348408 None:intergenic 30.0%
! GAATGATTGATAGCCAAAAT+AGG - chr4_1:79348447-79348466 Msa0575470:intron 30.0%
CAGAAGTAAACCAATAACAT+AGG + chr4_1:79348682-79348701 None:intergenic 30.0%
TGTAGTAGTATAACTTAACG+AGG - chr4_1:79348700-79348719 Msa0575470:intron 30.0%
GTAGTAGTATAACTTAACGA+GGG - chr4_1:79348701-79348720 Msa0575470:intron 30.0%
!! TTGATTTGTAGCGAAAGATA+AGG - chr4_1:79348947-79348966 Msa0575470:intron 30.0%
CACTTGAATGTTGTGTTTAT+TGG - chr4_1:79349017-79349036 Msa0575470:intron 30.0%
! GTTGCTTTACCAGTATATAT+AGG - chr4_1:79349070-79349089 Msa0575470:intron 30.0%
AAGCTGAATAAACGACAAAA+AGG + chr4_1:79349114-79349133 None:intergenic 30.0%
GTCTATCATCTATGCATTAT+AGG - chr4_1:79349172-79349191 Msa0575470:intron 30.0%
TTCATATGAAGTTGAACCAA+TGG + chr4_1:79349213-79349232 None:intergenic 30.0%
AAAAGACTTATGCTAGTAAG+AGG - chr4_1:79349574-79349593 Msa0575470:CDS 30.0%
! ATTGTAATTGCCTGATTTTG+TGG - chr4_1:79349628-79349647 Msa0575470:CDS 30.0%
GGAAAAACAAAGCTTAAAAG+AGG - chr4_1:79349690-79349709 Msa0575470:CDS 30.0%
!! AGATTTCTAGAGCTTATTTC+TGG - chr4_1:79349823-79349842 Msa0575470:CDS 30.0%
TATATTGATGAATGGGAGAT+GGG + chr4_1:79349872-79349891 None:intergenic 30.0%
TTATATTGATGAATGGGAGA+TGG + chr4_1:79349873-79349892 None:intergenic 30.0%
! TAGCTTCTTTCTCGTATTTT+TGG + chr4_1:79350166-79350185 None:intergenic 30.0%
AAAATACGAGAAAGAAGCTA+AGG - chr4_1:79350166-79350185 Msa0575470:intron 30.0%
!! TTAATTTGTTGTAGTTGGCA+AGG - chr4_1:79350301-79350320 Msa0575470:intron 30.0%
GCTCTATCATAAACCATATT+TGG + chr4_1:79350538-79350557 None:intergenic 30.0%
! TGGTTTATGATAGAGCATTA+TGG - chr4_1:79350542-79350561 Msa0575470:intron 30.0%
! TTGGTTGTTGATGTTTGTTA+GGG - chr4_1:79350609-79350628 Msa0575470:CDS 30.0%
TTACTTTCAACTCACTTTAG+AGG - chr4_1:79350783-79350802 Msa0575470:intron 30.0%
AAATTTATATGCCAGGTACA+TGG - chr4_1:79350890-79350909 Msa0575470:CDS 30.0%
! TGGTTTTTCCCATTTAATGT+AGG - chr4_1:79350981-79351000 Msa0575470:intron 30.0%
TATGTTCCTAATATGATCAG+TGG - chr4_1:79351360-79351379 Msa0575470:intron 30.0%
GATGAGCATAAAATACAGAA+AGG + chr4_1:79351503-79351522 None:intergenic 30.0%
! GTATTTTATGCTCATCAATC+AGG - chr4_1:79351507-79351526 Msa0575470:intron 30.0%
ATTCTAATGAGATACCTTAC+TGG - chr4_1:79351734-79351753 Msa0575470:intron 30.0%
!! ATTCCATTTCTAAAGCAATC+AGG - chr4_1:79351796-79351815 Msa0575470:intron 30.0%
!! TATCCTGATTGCTTTAGAAA+TGG + chr4_1:79351802-79351821 None:intergenic 30.0%
TCAGGATACCATGTAAAAAA+AGG - chr4_1:79351814-79351833 Msa0575470:intron 30.0%
!!! TCCTTCTTTTTTTTAGATGC+TGG - chr4_1:79351896-79351915 Msa0575470:CDS 30.0%
ACCAGCATCTAAAAAAAAGA+AGG + chr4_1:79351900-79351919 None:intergenic 30.0%
! AATGCATTATAAATAGTGGG+TGG - chr4_1:79351923-79351942 Msa0575470:intron 30.0%
AAAGTTAGGATTCGATATGA+GGG - chr4_1:79352133-79352152 Msa0575470:CDS 30.0%
! TTTTGTCTTTACCAGTTAAG+TGG - chr4_1:79352245-79352264 Msa0575470:intron 30.0%
!!! GTCTTGTTTTTACCAATATC+GGG - chr4_1:79352313-79352332 Msa0575470:CDS 30.0%
!!! TCTTGTTTTTACCAATATCG+GGG - chr4_1:79352314-79352333 Msa0575470:CDS 30.0%
TTAGAAATACAGTACCTGAA+AGG + chr4_1:79352457-79352476 None:intergenic 30.0%
AGAATTATAAAGGACCTCTA+GGG + chr4_1:79352506-79352525 None:intergenic 30.0%
AAGTTGAATCTGGTACTATT+CGG - chr4_1:79352634-79352653 Msa0575470:intron 30.0%
CTTATTTGGCATGATGAAAA+TGG + chr4_1:79352670-79352689 None:intergenic 30.0%
! CATTTTCATCATGCCAAATA+AGG - chr4_1:79352668-79352687 Msa0575470:intron 30.0%
CCTAAAAAGACTACCTTATT+TGG + chr4_1:79352684-79352703 None:intergenic 30.0%
! CCAAATAAGGTAGTCTTTTT+AGG - chr4_1:79352681-79352700 Msa0575470:intron 30.0%
AAATCAGAAGAAAGAATGGA+AGG + chr4_1:79352723-79352742 None:intergenic 30.0%
GGAAAAATCAGAAGAAAGAA+TGG + chr4_1:79352727-79352746 None:intergenic 30.0%
TGTCAACTACTTCAACAAAT+AGG + chr4_1:79352748-79352767 None:intergenic 30.0%
TGTTGAAGAAGAAGACATAT+TGG - chr4_1:79352876-79352895 Msa0575470:intron 30.0%
TATAGTTAGGCAAATTCTCA+TGG + chr4_1:79353118-79353137 None:intergenic 30.0%
!!! CAAATTGTGTTGTTTTCGTT+TGG - chr4_1:79353173-79353192 Msa0575470:intron 30.0%
! AGTAGAACTTGAAGCATTTA+TGG + chr4_1:79353288-79353307 None:intergenic 30.0%
!! TATTGGATTTGCTGCAAAAA+GGG + chr4_1:79353390-79353409 None:intergenic 30.0%
!! ATATTGGATTTGCTGCAAAA+AGG + chr4_1:79353391-79353410 None:intergenic 30.0%
TTTGTTTGGCTAAAAATTGG+TGG - chr4_1:79353774-79353793 Msa0575470:intron 30.0%
!! TTCCTCATAGTATTTGGTTT+TGG - chr4_1:79353971-79353990 Msa0575470:intron 30.0%
TAGCGATATCAACTAAATAG+AGG + chr4_1:79354046-79354065 None:intergenic 30.0%
TTGATATCGCTATCTAATGT+GGG - chr4_1:79354054-79354073 Msa0575470:intron 30.0%
AGTATACGAAATTAGACATC+TGG - chr4_1:79354112-79354131 Msa0575470:intron 30.0%
!!! CAATTCTATATGCTAGCTTT+TGG - chr4_1:79354199-79354218 Msa0575470:intron 30.0%
!!! ATTCTATATGCTAGCTTTTG+GGG - chr4_1:79354201-79354220 Msa0575470:intron 30.0%
AAGAAGGAAAAAGATTTGAG+AGG + chr4_1:79354325-79354344 None:intergenic 30.0%
! GTATCAGAGCCTATATTTTA+AGG - chr4_1:79354365-79354384 Msa0575470:intron 30.0%
! TGATAGAAAGCACATAGAAA+TGG + chr4_1:79354616-79354635 None:intergenic 30.0%
AGTCAGCAATGAAATAAGAA+GGG + chr4_1:79354833-79354852 None:intergenic 30.0%
AAGTCAGCAATGAAATAAGA+AGG + chr4_1:79354834-79354853 None:intergenic 30.0%
!!! AGTTTTTTTTCCTTTCATCC+GGG - chr4_1:79354958-79354977 Msa0575470:intron 30.0%
ATTTCTCAACAAATACCCTT+GGG + chr4_1:79354999-79355018 None:intergenic 30.0%
ACTTTGTAATGTTGTTCATC+TGG - chr4_1:79355484-79355503 Msa0575470:intron 30.0%
!! GAAATTAGGTTGCATTTTCT+TGG - chr4_1:79355903-79355922 Msa0575470:intron 30.0%
!! AATTAGGTTGCATTTTCTTG+GGG - chr4_1:79355905-79355924 Msa0575470:intron 30.0%
AAAACTTCATCAGGTATACT+CGG + chr4_1:79356167-79356186 None:intergenic 30.0%
TGCAAAAACAAAGATGCGTA+AGG + chr4_1:79346931-79346950 None:intergenic 35.0%
! TTAAGATTCTTTCTGAGGGA+GGG + chr4_1:79347054-79347073 None:intergenic 35.0%
GATGGTTAAGATTCTTTCTG+AGG + chr4_1:79347059-79347078 None:intergenic 35.0%
GAAAGAATCTTAACCATCCA+TGG - chr4_1:79347061-79347080 Msa0575470:three_prime_UTR 35.0%
AGAGTTTGTGTGAACAGAAT+AGG + chr4_1:79347316-79347335 None:intergenic 35.0%
GGTGATCATCTTTATTACTG+TGG - chr4_1:79347446-79347465 Msa0575470:intron 35.0%
TCACAACCGTATCAAATTTC+CGG - chr4_1:79347480-79347499 Msa0575470:intron 35.0%
ATAATACGACACCCAACTTA+TGG - chr4_1:79347511-79347530 Msa0575470:intron 35.0%
! TACTACTGTACTGTGACTTT+TGG - chr4_1:79347551-79347570 Msa0575470:intron 35.0%
!!! CTTTGAGGTTTTAAGGAATC+AGG - chr4_1:79347738-79347757 Msa0575470:intron 35.0%
!! TTTTAAGGAATCAGGAGAGT+CGG - chr4_1:79347746-79347765 Msa0575470:intron 35.0%
TTGAATGGTAGATATTGAGG+AGG - chr4_1:79347796-79347815 Msa0575470:intron 35.0%
ACACAAAAACCTTATGCCTA+AGG + chr4_1:79347857-79347876 None:intergenic 35.0%
! AATCTCATTAGCATCGAAAG+TGG - chr4_1:79348104-79348123 Msa0575470:intron 35.0%
! ATCTCATTAGCATCGAAAGT+GGG - chr4_1:79348105-79348124 Msa0575470:intron 35.0%
TGTAAGAAGCAGAAAAAGGT+TGG + chr4_1:79348212-79348231 None:intergenic 35.0%
TTGTGTTAAGGGGAAATGAA+AGG + chr4_1:79348241-79348260 None:intergenic 35.0%
AGAGACCTTAAGAAAAAGGA+GGG + chr4_1:79348385-79348404 None:intergenic 35.0%
AAGAGACCTTAAGAAAAAGG+AGG + chr4_1:79348386-79348405 None:intergenic 35.0%
! ATTGGATGAGACCTATTTTG+GGG + chr4_1:79348481-79348500 None:intergenic 35.0%
! GATTGGATGAGACCTATTTT+GGG + chr4_1:79348482-79348501 None:intergenic 35.0%
! AGATTGGATGAGACCTATTT+TGG + chr4_1:79348483-79348502 None:intergenic 35.0%
! TCATCTGTTTCTTCTAGCAA+TGG - chr4_1:79348600-79348619 Msa0575470:intron 35.0%
! TTGTTTGCTGCCTATGTTAT+TGG - chr4_1:79348669-79348688 Msa0575470:intron 35.0%
TTCGCTACAAATCAAAGTCA+TGG + chr4_1:79348942-79348961 None:intergenic 35.0%
ACTTCTTCATCTTGAACAGA+AGG + chr4_1:79348978-79348997 None:intergenic 35.0%
! AGCTTTTATCACTGTGCAAT+TGG - chr4_1:79349129-79349148 Msa0575470:intron 35.0%
TGTGCAATTGGTCAAGATTA+TGG - chr4_1:79349141-79349160 Msa0575470:intron 35.0%
TCAAGACAGAGATGAAATGA+AGG - chr4_1:79349320-79349339 Msa0575470:intron 35.0%
!! GAAGGTATTCTTGACTAGAA+CGG - chr4_1:79349338-79349357 Msa0575470:intron 35.0%
AAGCAAGTTTAGTCTGTGTT+TGG + chr4_1:79349515-79349534 None:intergenic 35.0%
TCAGTGAGATGTGAATTTGA+AGG - chr4_1:79349668-79349687 Msa0575470:CDS 35.0%
CAGTGAGATGTGAATTTGAA+GGG - chr4_1:79349669-79349688 Msa0575470:CDS 35.0%
!! TATTTCTGGTGTAGGTTGTA+AGG - chr4_1:79349837-79349856 Msa0575470:CDS 35.0%
!! GGGTCTTAATTTGTTGTAGT+TGG - chr4_1:79350296-79350315 Msa0575470:intron 35.0%
CTTGGTTGTTGATGTTTGTT+AGG - chr4_1:79350608-79350627 Msa0575470:CDS 35.0%
! TGGTTGTTGATGTTTGTTAG+GGG - chr4_1:79350610-79350629 Msa0575470:CDS 35.0%
CATAATATAAGCCATGTACC+TGG + chr4_1:79350904-79350923 None:intergenic 35.0%
CAGGTACATGGCTTATATTA+TGG - chr4_1:79350902-79350921 Msa0575470:CDS 35.0%
TATTATGGACACAAATGAGG+AGG - chr4_1:79350917-79350936 Msa0575470:CDS 35.0%
AGTGGAGACCTACATTAAAT+GGG + chr4_1:79350992-79351011 None:intergenic 35.0%
AAGTGGAGACCTACATTAAA+TGG + chr4_1:79350993-79351012 None:intergenic 35.0%
!!! ATTTTGAGACAGAGACAACA+AGG - chr4_1:79351105-79351124 Msa0575470:intron 35.0%
TATTAGGAACATAGCTCTTG+TGG + chr4_1:79351353-79351372 None:intergenic 35.0%
AATGATTCTTCACGAGCATT+TGG - chr4_1:79351460-79351479 Msa0575470:CDS 35.0%
TCAATCAGGTAATTTCTGCT+CGG - chr4_1:79351521-79351540 Msa0575470:intron 35.0%
! TTTGAAACTGGATATGAGAG+AGG - chr4_1:79351553-79351572 Msa0575470:intron 35.0%
GCTTGTGGTTGTCAATAAAA+TGG - chr4_1:79351630-79351649 Msa0575470:CDS 35.0%
! TCTTTTGACCAGTTTACTGT+AGG + chr4_1:79351661-79351680 None:intergenic 35.0%
CAGTAAACTGGTCAAAAGAA+AGG - chr4_1:79351662-79351681 Msa0575470:CDS 35.0%
GCATATAAGCTCATAAAGGA+AGG + chr4_1:79351713-79351732 None:intergenic 35.0%
CTAATAAAACACCACCAGTA+AGG + chr4_1:79351751-79351770 None:intergenic 35.0%
!! CTTACTGGTGGTGTTTTATT+AGG - chr4_1:79351749-79351768 Msa0575470:intron 35.0%
AAACTCTTAGGAGTGAACTA+TGG + chr4_1:79352013-79352032 None:intergenic 35.0%
GAAAGTTAGGATTCGATATG+AGG - chr4_1:79352132-79352151 Msa0575470:CDS 35.0%
!! GATTCGATATGAGGGTATTT+AGG - chr4_1:79352141-79352160 Msa0575470:CDS 35.0%
GTTTGCATAATCCACTTAAC+TGG + chr4_1:79352259-79352278 None:intergenic 35.0%
!! TGGATAGAAGCATTTGTTCA+TGG - chr4_1:79352365-79352384 Msa0575470:intron 35.0%
!! ATAGAAGCATTTGTTCATGG+TGG - chr4_1:79352368-79352387 Msa0575470:intron 35.0%
!! TAGAAGCATTTGTTCATGGT+GGG - chr4_1:79352369-79352388 Msa0575470:intron 35.0%
AGGAACTTCGATACTATCAA+GGG + chr4_1:79352416-79352435 None:intergenic 35.0%
TAGGAACTTCGATACTATCA+AGG + chr4_1:79352417-79352436 None:intergenic 35.0%
! TGATAGTATCGAAGTTCCTA+TGG - chr4_1:79352417-79352436 Msa0575470:intron 35.0%
! GATAGTATCGAAGTTCCTAT+GGG - chr4_1:79352418-79352437 Msa0575470:intron 35.0%
AATTATAAAGGACCTCTAGG+GGG + chr4_1:79352504-79352523 None:intergenic 35.0%
GAATTATAAAGGACCTCTAG+GGG + chr4_1:79352505-79352524 None:intergenic 35.0%
CAGAATTATAAAGGACCTCT+AGG + chr4_1:79352507-79352526 None:intergenic 35.0%
ATTGAACTTCTGATCTTTGC+AGG - chr4_1:79352562-79352581 Msa0575470:intron 35.0%
AGTTGAATCTGGTACTATTC+GGG - chr4_1:79352635-79352654 Msa0575470:intron 35.0%
! ACAACTGTACTTCATTTTGC+AGG - chr4_1:79352765-79352784 Msa0575470:intron 35.0%
AATTTACGCGTTCGATTATC+TGG - chr4_1:79352853-79352872 Msa0575470:intron 35.0%
! AAGAAGAAGACATATTGGCT+GGG - chr4_1:79352881-79352900 Msa0575470:intron 35.0%
TGAGGTCACAGTATATAGTT+AGG + chr4_1:79353131-79353150 None:intergenic 35.0%
!! ATTGGATTTGCTGCAAAAAG+GGG + chr4_1:79353389-79353408 None:intergenic 35.0%
AACTCAGTAACTGCTGATAT+TGG + chr4_1:79353407-79353426 None:intergenic 35.0%
ACACGTTGTCTAGTAATTCA+AGG + chr4_1:79353448-79353467 None:intergenic 35.0%
CATCTGTACATAAATTCTGC+AGG - chr4_1:79353527-79353546 Msa0575470:intron 35.0%
GTAAAAAATGCACCTGAACA+CGG + chr4_1:79353707-79353726 None:intergenic 35.0%
!! TTGGTGGACAATCTTTTGTT+TGG - chr4_1:79353760-79353779 Msa0575470:intron 35.0%
AACAGTTATAACACTGCTAC+TGG + chr4_1:79353844-79353863 None:intergenic 35.0%
!! TCACTCTAGAATATTGTCTC+TGG - chr4_1:79353906-79353925 Msa0575470:intron 35.0%
GTCCAAAACCAAATACTATG+AGG + chr4_1:79353976-79353995 None:intergenic 35.0%
GTTGATATCGCTATCTAATG+TGG - chr4_1:79354053-79354072 Msa0575470:intron 35.0%
ATACGAAATTAGACATCTGG+CGG - chr4_1:79354115-79354134 Msa0575470:intron 35.0%
CACAAACTCAAATCCTAAGA+TGG + chr4_1:79354172-79354191 None:intergenic 35.0%
!!! TTCTATATGCTAGCTTTTGG+GGG - chr4_1:79354202-79354221 Msa0575470:intron 35.0%
!!! TTTGATCTCTCCCTTTTTTG+AGG - chr4_1:79354401-79354420 Msa0575470:intron 35.0%
!!! TTGATCTCTCCCTTTTTTGA+GGG - chr4_1:79354402-79354421 Msa0575470:intron 35.0%
AAAGAAGGACCCTCAAAAAA+GGG + chr4_1:79354414-79354433 None:intergenic 35.0%
AATTGCCATCTTGGAGAAAT+TGG - chr4_1:79354510-79354529 Msa0575470:intron 35.0%
! AGAAAGCACATAGAAATGGT+TGG + chr4_1:79354612-79354631 None:intergenic 35.0%
CATCACTTACATCTACAATG+AGG - chr4_1:79354734-79354753 Msa0575470:intron 35.0%
AAGTAAAACCACTGAGTTCA+TGG + chr4_1:79354767-79354786 None:intergenic 35.0%
TGAAATAAGAAGGGAAGCTT+GGG + chr4_1:79354824-79354843 None:intergenic 35.0%
ATGAAATAAGAAGGGAAGCT+TGG + chr4_1:79354825-79354844 None:intergenic 35.0%
TAAATCTCTCTCGAAGACTA+CGG + chr4_1:79354923-79354942 None:intergenic 35.0%
CCTTGTTAATTAGTTCCCAA+GGG - chr4_1:79354981-79355000 Msa0575470:intron 35.0%
GATTTCTCAACAAATACCCT+TGG + chr4_1:79355000-79355019 None:intergenic 35.0%
! AATGATAATGAGTACCCTTG+AGG + chr4_1:79355134-79355153 None:intergenic 35.0%
! ACAGCAATAGTTTTTCCTGT+AGG + chr4_1:79355367-79355386 None:intergenic 35.0%
TACAGGAAAAACTATTGCTG+TGG - chr4_1:79355366-79355385 Msa0575470:intron 35.0%
ACAGGAAAAACTATTGCTGT+GGG - chr4_1:79355367-79355386 Msa0575470:intron 35.0%
AAATCTGTAGACACGATGAT+CGG + chr4_1:79355641-79355660 None:intergenic 35.0%
!! AATTAATTTGCTACTGCCAC+TGG - chr4_1:79355718-79355737 Msa0575470:intron 35.0%
!! ATTAATTTGCTACTGCCACT+GGG - chr4_1:79355719-79355738 Msa0575470:intron 35.0%
TAAAACTGACATTTCCATGC+AGG + chr4_1:79355748-79355767 None:intergenic 35.0%
AATTCACTACGACTAATCGT+TGG - chr4_1:79355796-79355815 Msa0575470:intron 35.0%
AGTCTGCCATATATCCATTT+CGG - chr4_1:79355881-79355900 Msa0575470:intron 35.0%
ATGCAACCTAATTTCCGAAA+TGG + chr4_1:79355898-79355917 None:intergenic 35.0%
! CCTGTTGCTTCAGTATTATA+CGG - chr4_1:79355993-79356012 Msa0575470:intron 35.0%
CAACTCTACAAAACTTCATC+AGG + chr4_1:79356176-79356195 None:intergenic 35.0%
!! CTGATGAAGTTTTGTAGAGT+TGG - chr4_1:79356174-79356193 Msa0575470:intron 35.0%
ATTTCGACGATGAACTGATA+TGG - chr4_1:79356213-79356232 Msa0575470:five_prime_UTR 35.0%
! AGACATAACGAACTTTAGAG+TGG - chr4_1:79356346-79356365 Msa0575470:five_prime_UTR 35.0%
TTCGTTTCGTTTCGTTTGCA+GGG + chr4_1:79346966-79346985 None:intergenic 40.0%
TTTCGTTTCGTTTCGTTTGC+AGG + chr4_1:79346967-79346986 None:intergenic 40.0%
! GTTAAGATTCTTTCTGAGGG+AGG + chr4_1:79347055-79347074 None:intergenic 40.0%
GGCTTTCCGGAAATTTGATA+CGG + chr4_1:79347489-79347508 None:intergenic 40.0%
! AAGTTGGGTGTCGTATTATG+CGG + chr4_1:79347510-79347529 None:intergenic 40.0%
!! ACATCTTGCTTTTCATGCTC+TGG + chr4_1:79347982-79348001 None:intergenic 40.0%
!! GAAGGTTTGTTGTCATGAAG+TGG - chr4_1:79348024-79348043 Msa0575470:intron 40.0%
TAAGAAAAAGGAGGGAAGAC+AGG + chr4_1:79348377-79348396 None:intergenic 40.0%
! GTCTTCCCTCCTTTTTCTTA+AGG - chr4_1:79348377-79348396 Msa0575470:intron 40.0%
CATCCAATCTATGACAAGCT+CGG - chr4_1:79348493-79348512 Msa0575470:intron 40.0%
!! CATTCCAATACCTTTTGGCT+CGG + chr4_1:79348807-79348826 None:intergenic 40.0%
ATGGAGTGAGGACATGAAAA+TGG + chr4_1:79348923-79348942 None:intergenic 40.0%
CAAATCAAAGTCATGGAGTG+AGG + chr4_1:79348935-79348954 None:intergenic 40.0%
AGATGAAGAAGTCGAGCAAA+CGG - chr4_1:79348986-79349005 Msa0575470:intron 40.0%
GTTGTGTTTATTGGGCATGT+TGG - chr4_1:79349026-79349045 Msa0575470:intron 40.0%
GTAAGCTGATAAATCCCACA+TGG - chr4_1:79349048-79349067 Msa0575470:intron 40.0%
TACTGGTAAAGCAACCATGT+GGG + chr4_1:79349065-79349084 None:intergenic 40.0%
ATACTGGTAAAGCAACCATG+TGG + chr4_1:79349066-79349085 None:intergenic 40.0%
TAACCGGTAAAGAGTCAACA+GGG + chr4_1:79349277-79349296 None:intergenic 40.0%
! AATTTTCAGAGGGCAGTAAC+CGG + chr4_1:79349293-79349312 None:intergenic 40.0%
GTATTCTTGACTAGAACGGT+GGG - chr4_1:79349342-79349361 Msa0575470:intron 40.0%
!! CTGCTCACTTGTTATTCATG+TGG - chr4_1:79349371-79349390 Msa0575470:intron 40.0%
ACTTATGCTAGTAAGAGGTG+AGG - chr4_1:79349579-79349598 Msa0575470:CDS 40.0%
AAAGCTTAAAAGAGGGCAGA+GGG - chr4_1:79349698-79349717 Msa0575470:intron 40.0%
ACTGCATAAAGAAGAGCTGT+TGG - chr4_1:79349735-79349754 Msa0575470:intron 40.0%
CTGCATAAAGAAGAGCTGTT+GGG - chr4_1:79349736-79349755 Msa0575470:intron 40.0%
!! CTAGAGCTTATTTCTGGTGT+AGG - chr4_1:79349829-79349848 Msa0575470:CDS 40.0%
! GTTCTTCTTGTTCTAGATGC+TGG - chr4_1:79350080-79350099 Msa0575470:intron 40.0%
AAATGATTAGGCAGCAAAGC+AGG + chr4_1:79350261-79350280 None:intergenic 40.0%
GTTGCAGCAAGCAAATGATT+AGG + chr4_1:79350273-79350292 None:intergenic 40.0%
! GGTTGTTGATGTTTGTTAGG+GGG - chr4_1:79350611-79350630 Msa0575470:CDS 40.0%
TTAGAGGAGCCAAATCTTGT+TGG - chr4_1:79350799-79350818 Msa0575470:intron 40.0%
TAGAGGAGCCAAATCTTGTT+GGG - chr4_1:79350800-79350819 Msa0575470:intron 40.0%
AAATGAGGAGGAGAGAGTAA+AGG - chr4_1:79350929-79350948 Msa0575470:CDS 40.0%
! GACAACAAGGTTCACCATTT+TGG - chr4_1:79351118-79351137 Msa0575470:intron 40.0%
CAAGCAATGCATATACTCAC+AGG + chr4_1:79351149-79351168 None:intergenic 40.0%
! TTCTCCTCAGATCAGTTTTC+TGG - chr4_1:79351170-79351189 Msa0575470:intron 40.0%
! TCTCCTCAGATCAGTTTTCT+GGG - chr4_1:79351171-79351190 Msa0575470:intron 40.0%
! GCAGCAGAATATGCATTTTG+AGG + chr4_1:79351197-79351216 None:intergenic 40.0%
GATGCACCACTGATCATATT+AGG + chr4_1:79351369-79351388 None:intergenic 40.0%
TCAAGCTGATATTGGAGTGT+TGG - chr4_1:79351389-79351408 Msa0575470:intron 40.0%
TGTCCAGCTTGCAAAAACAT+TGG - chr4_1:79351594-79351613 Msa0575470:CDS 40.0%
GTCCAGCTTGCAAAAACATT+GGG - chr4_1:79351595-79351614 Msa0575470:CDS 40.0%
CTAATGAGATACCTTACTGG+TGG - chr4_1:79351737-79351756 Msa0575470:intron 40.0%
ATGCTTCACTAACATGACAG+AGG - chr4_1:79351973-79351992 Msa0575470:intron 40.0%
GACGAGAGTAAGAAACTCTT+AGG + chr4_1:79352025-79352044 None:intergenic 40.0%
AGTTTCTTACTCTCGTCTAG+AGG - chr4_1:79352028-79352047 Msa0575470:intron 40.0%
TTACTCTCGTCTAGAGGAAT+GGG - chr4_1:79352034-79352053 Msa0575470:intron 40.0%
TCAAGGGCTTCAAATAAGCA+AGG + chr4_1:79352400-79352419 None:intergenic 40.0%
! CAGTACCTGAAAGGTCTTTT+GGG + chr4_1:79352448-79352467 None:intergenic 40.0%
! ACAGTACCTGAAAGGTCTTT+TGG + chr4_1:79352449-79352468 None:intergenic 40.0%
! ATTATAAAGGACCTCTAGGG+GGG + chr4_1:79352503-79352522 None:intergenic 40.0%
AGACATGGGAACTGTTGTTA+TGG - chr4_1:79352608-79352627 Msa0575470:intron 40.0%
GACATGGGAACTGTTGTTAT+GGG - chr4_1:79352609-79352628 Msa0575470:intron 40.0%
GTTATGGGCAAAGTTGAATC+TGG - chr4_1:79352624-79352643 Msa0575470:intron 40.0%
GAAGAAGAAGACATATTGGC+TGG - chr4_1:79352880-79352899 Msa0575470:intron 40.0%
! TGTTTGGAATGGGAAATGTG+AGG + chr4_1:79353149-79353168 None:intergenic 40.0%
! GAAGCATTTATGGCAGGAAA+AGG + chr4_1:79353278-79353297 None:intergenic 40.0%
! GAACTTGAAGCATTTATGGC+AGG + chr4_1:79353284-79353303 None:intergenic 40.0%
AGAAACCATTATGCAGCACA+TGG + chr4_1:79353349-79353368 None:intergenic 40.0%
CTGCATAATGGTTTCTTACG+CGG - chr4_1:79353353-79353372 Msa0575470:intron 40.0%
!! TACTGAGTTTGTTGCTCAGT+TGG - chr4_1:79353418-79353437 Msa0575470:intron 40.0%
TTCATGGGCTTCTTTGTCTT+TGG + chr4_1:79353642-79353661 None:intergenic 40.0%
TGTTGTATTATGCCGTGTTC+AGG - chr4_1:79353692-79353711 Msa0575470:intron 40.0%
AACCCAAAAAGCTAGCTCAT+GGG - chr4_1:79353998-79354017 Msa0575470:intron 40.0%
CAAATCCTAAGATGGTAGCA+TGG + chr4_1:79354164-79354183 None:intergenic 40.0%
GAGGAAGAGAAGAAAACAAC+AGG + chr4_1:79354306-79354325 None:intergenic 40.0%
CAAAGAAGGACCCTCAAAAA+AGG + chr4_1:79354415-79354434 None:intergenic 40.0%
ATGATTGTCAGCGACAAAGA+AGG + chr4_1:79354429-79354448 None:intergenic 40.0%
TTCACAAAGGAGAAGGTGAT+TGG + chr4_1:79354492-79354511 None:intergenic 40.0%
ATGGCAATTCACAAAGGAGA+AGG + chr4_1:79354499-79354518 None:intergenic 40.0%
TCCTTTGTGAATTGCCATCT+TGG - chr4_1:79354501-79354520 Msa0575470:intron 40.0%
TCCAAGATGGCAATTCACAA+AGG + chr4_1:79354505-79354524 None:intergenic 40.0%
GTCATCCAATTTCTCCAAGA+TGG + chr4_1:79354518-79354537 None:intergenic 40.0%
TCAGAAGATGATTGCGACAT+AGG - chr4_1:79354633-79354652 Msa0575470:intron 40.0%
AAATGCACAGGTTCAAGGAA+GGG + chr4_1:79354795-79354814 None:intergenic 40.0%
AAAATGCACAGGTTCAAGGA+AGG + chr4_1:79354796-79354815 None:intergenic 40.0%
AGACAAAATGCACAGGTTCA+AGG + chr4_1:79354800-79354819 None:intergenic 40.0%
GAAATAAGAAGGGAAGCTTG+GGG + chr4_1:79354823-79354842 None:intergenic 40.0%
! GCCTTGTTAATTAGTTCCCA+AGG - chr4_1:79354980-79354999 Msa0575470:intron 40.0%
CCCTTGGGAACTAATTAACA+AGG + chr4_1:79354984-79355003 None:intergenic 40.0%
AATCCTTAACAGGTACCTCA+AGG - chr4_1:79355116-79355135 Msa0575470:intron 40.0%
ATCCTTAACAGGTACCTCAA+GGG - chr4_1:79355117-79355136 Msa0575470:intron 40.0%
! TTCTCCGATTTTCCACAACT+AGG - chr4_1:79355236-79355255 Msa0575470:CDS 40.0%
! TCTCCGATTTTCCACAACTA+GGG - chr4_1:79355237-79355256 Msa0575470:CDS 40.0%
! TTTGACTTACTCTGTCCTAC+AGG - chr4_1:79355349-79355368 Msa0575470:intron 40.0%
!! TCACCTGTGCTTGCTTTTAA+CGG - chr4_1:79355458-79355477 Msa0575470:intron 40.0%
TTTGGAAACCGACTAGCAAA+TGG - chr4_1:79355573-79355592 Msa0575470:intron 40.0%
CAACAACTAACTCTCCATTG+AGG + chr4_1:79355935-79355954 None:intergenic 40.0%
CCGTATAATACTGAAGCAAC+AGG + chr4_1:79355996-79356015 None:intergenic 40.0%
ATACCACAGCTAATCTTAGG+TGG + chr4_1:79356067-79356086 None:intergenic 40.0%
CAGATACCACAGCTAATCTT+AGG + chr4_1:79356070-79356089 None:intergenic 40.0%
AGTTCATCGTCGAAATACAC+GGG + chr4_1:79356209-79356228 None:intergenic 40.0%
CAGTTCATCGTCGAAATACA+CGG + chr4_1:79356210-79356229 None:intergenic 40.0%
AAGAGAACGTAACGTACCCA+TGG + chr4_1:79347081-79347100 None:intergenic 45.0%
! TATCATGCTGCTGCTGATTG+TGG - chr4_1:79347400-79347419 Msa0575470:CDS 45.0%
TGTCGTATTATGCGGCTTTC+CGG + chr4_1:79347502-79347521 None:intergenic 45.0%
TCTTTACAGCTTGACTCAGC+AGG - chr4_1:79347827-79347846 Msa0575470:intron 45.0%
TGACTCAGCAGGTAATCCTT+AGG - chr4_1:79347838-79347857 Msa0575470:intron 45.0%
GCAGGTAATCCTTAGGCATA+AGG - chr4_1:79347845-79347864 Msa0575470:intron 45.0%
AGCAGAAGACATTAATGGGG+TGG - chr4_1:79347951-79347970 Msa0575470:intron 45.0%
! GAGTCTCGTTTTCAACCGTT+GGG + chr4_1:79348318-79348337 None:intergenic 45.0%
! AGAGTCTCGTTTTCAACCGT+TGG + chr4_1:79348319-79348338 None:intergenic 45.0%
! TGGGGACAGTGTACCTATTT+TGG + chr4_1:79348463-79348482 None:intergenic 45.0%
AGGTACACTGTCCCCAAAAT+AGG - chr4_1:79348467-79348486 Msa0575470:intron 45.0%
CAACCGAGCTTGTCATAGAT+TGG + chr4_1:79348499-79348518 None:intergenic 45.0%
!! AGATCGAGAGCATCGTATGA+GGG - chr4_1:79348724-79348743 Msa0575470:intron 45.0%
GACTGTTTCAGATCCAAAGC+AGG - chr4_1:79348757-79348776 Msa0575470:intron 45.0%
TGTTTCAGATCCAAAGCAGG+AGG - chr4_1:79348760-79348779 Msa0575470:intron 45.0%
AAGTCGAGCAAACGGAGAAA+AGG - chr4_1:79348994-79349013 Msa0575470:intron 45.0%
!! TACCCCTGTTGACTCTTTAC+CGG - chr4_1:79349271-79349290 Msa0575470:intron 45.0%
AACCGGTAAAGAGTCAACAG+GGG + chr4_1:79349276-79349295 None:intergenic 45.0%
GTAACCGGTAAAGAGTCAAC+AGG + chr4_1:79349278-79349297 None:intergenic 45.0%
GGTATTCTTGACTAGAACGG+TGG - chr4_1:79349341-79349360 Msa0575470:intron 45.0%
TATGCTAGTAAGAGGTGAGG+TGG - chr4_1:79349582-79349601 Msa0575470:CDS 45.0%
TAGTAAGAGGTGAGGTGGAA+GGG - chr4_1:79349587-79349606 Msa0575470:CDS 45.0%
AGGTGGAAGGGAATATACGT+GGG - chr4_1:79349599-79349618 Msa0575470:CDS 45.0%
CAAAGCTTAAAAGAGGGCAG+AGG - chr4_1:79349697-79349716 Msa0575470:intron 45.0%
AAGCTTAAAAGAGGGCAGAG+GGG - chr4_1:79349699-79349718 Msa0575470:intron 45.0%
TAAAAGCGACCTTTCTCGCA+TGG - chr4_1:79350004-79350023 Msa0575470:intron 45.0%
ACACATAGACCATGCGAGAA+AGG + chr4_1:79350016-79350035 None:intergenic 45.0%
!! GACCACTGAGGAAAAGTATC+TGG + chr4_1:79350124-79350143 None:intergenic 45.0%
! GATACTTTTCCTCAGTGGTC+AGG - chr4_1:79350124-79350143 Msa0575470:intron 45.0%
AGGACAAAAGTCGAGAAAGC+TGG - chr4_1:79350186-79350205 Msa0575470:intron 45.0%
TTAGGCAGCAAAGCAGGATT+TGG + chr4_1:79350255-79350274 None:intergenic 45.0%
! TCATTTGCTTGCTGCAACTC+AGG - chr4_1:79350275-79350294 Msa0575470:intron 45.0%
! CATTTGCTTGCTGCAACTCA+GGG - chr4_1:79350276-79350295 Msa0575470:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr4_1:79350591-79350610 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr4_1:79350592-79350611 None:intergenic 45.0%
! GTGAAGCGTTCACCTTAGAA+GGG + chr4_1:79350643-79350662 None:intergenic 45.0%
! AGTGAAGCGTTCACCTTAGA+AGG + chr4_1:79350644-79350663 None:intergenic 45.0%
AGCCAAATCTTGTTGGGAGA+GGG - chr4_1:79350806-79350825 Msa0575470:CDS 45.0%
ACTCACAGGTGCATCCAAAA+TGG + chr4_1:79351135-79351154 None:intergenic 45.0%
GGTGCATCTCAAGCTGATAT+TGG - chr4_1:79351381-79351400 Msa0575470:intron 45.0%
TCAGGTAATTTCTGCTCGGA+AGG - chr4_1:79351525-79351544 Msa0575470:intron 45.0%
CAGGTAATTTCTGCTCGGAA+GGG - chr4_1:79351526-79351545 Msa0575470:intron 45.0%
GAAACTGGATATGAGAGAGG+TGG - chr4_1:79351556-79351575 Msa0575470:intron 45.0%
!! CACCCAATGTTTTTGCAAGC+TGG + chr4_1:79351600-79351619 None:intergenic 45.0%
TGGACGATCCTACAGTAAAC+TGG - chr4_1:79351650-79351669 Msa0575470:CDS 45.0%
CTTACTCTCGTCTAGAGGAA+TGG - chr4_1:79352033-79352052 Msa0575470:intron 45.0%
TACTCTCGTCTAGAGGAATG+GGG - chr4_1:79352035-79352054 Msa0575470:intron 45.0%
! AGGGTATTTAGGTCGTGCAA+GGG - chr4_1:79352152-79352171 Msa0575470:CDS 45.0%
! CACACAATAACTTGCAGAGC+GGG + chr4_1:79352189-79352208 None:intergenic 45.0%
! CCACACAATAACTTGCAGAG+CGG + chr4_1:79352190-79352209 None:intergenic 45.0%
CGCTCTGCAAGTTATTGTGT+GGG - chr4_1:79352188-79352207 Msa0575470:intron 45.0%
TTTACCAATATCGGGGCTCA+TGG - chr4_1:79352321-79352340 Msa0575470:CDS 45.0%
TTACCAATATCGGGGCTCAT+GGG - chr4_1:79352322-79352341 Msa0575470:CDS 45.0%
! AGCATTTGTTCATGGTGGGA+TGG - chr4_1:79352373-79352392 Msa0575470:intron 45.0%
! GCATTTGTTCATGGTGGGAT+GGG - chr4_1:79352374-79352393 Msa0575470:intron 45.0%
GAGATCCCAAAAGACCTTTC+AGG - chr4_1:79352440-79352459 Msa0575470:intron 45.0%
! TTATAAAGGACCTCTAGGGG+GGG + chr4_1:79352502-79352521 None:intergenic 45.0%
TGAATCTGGTACTATTCGGG+AGG - chr4_1:79352638-79352657 Msa0575470:intron 45.0%
GAATCTGGTACTATTCGGGA+GGG - chr4_1:79352639-79352658 Msa0575470:intron 45.0%
! CGAACGCGTAAATTTTCACC+AGG + chr4_1:79352847-79352866 None:intergenic 45.0%
GCAAATTCTCATGGCATGCT+AGG + chr4_1:79353109-79353128 None:intergenic 45.0%
AAGGTTCTTCTGTCACCATC+TGG + chr4_1:79353259-79353278 None:intergenic 45.0%
GTGATCCATGTGCTGCATAA+TGG - chr4_1:79353341-79353360 Msa0575470:intron 45.0%
!!! CTGCAGGCTATTTTTACTGC+TGG - chr4_1:79353543-79353562 Msa0575470:intron 45.0%
CACATTCCTCAACTACAGAG+TGG + chr4_1:79353590-79353609 None:intergenic 45.0%
CAACCCAAAAAGCTAGCTCA+TGG - chr4_1:79353997-79354016 Msa0575470:intron 45.0%
ACCCAAAAAGCTAGCTCATG+GGG - chr4_1:79353999-79354018 Msa0575470:intron 45.0%
TGGCCTATCATGGATCCATT+GGG + chr4_1:79354144-79354163 None:intergenic 45.0%
ATGGCCTATCATGGATCCAT+TGG + chr4_1:79354145-79354164 None:intergenic 45.0%
ATAGGCCATGCTACCATCTT+AGG - chr4_1:79354156-79354175 Msa0575470:intron 45.0%
AAGGGAGAGATCAAAAGCCA+TGG + chr4_1:79354396-79354415 None:intergenic 45.0%
TTTGGAAAGAGGGCAACAGT+GGG + chr4_1:79354458-79354477 None:intergenic 45.0%
! GCAGATTGCCTTTGGAAAGA+GGG + chr4_1:79354468-79354487 None:intergenic 45.0%
TCAGGTAGAACATGCACTGA+AGG - chr4_1:79354557-79354576 Msa0575470:intron 45.0%
CAGGTAGAACATGCACTGAA+GGG - chr4_1:79354558-79354577 Msa0575470:intron 45.0%
TTGGATTCACGACGAAATGG+TGG + chr4_1:79354593-79354612 None:intergenic 45.0%
TGGTTGGATTCACGACGAAA+TGG + chr4_1:79354596-79354615 None:intergenic 45.0%
AACAACCATGGAGCAACAGT+TGG + chr4_1:79354698-79354717 None:intergenic 45.0%
GTAAGTGATGACTGCAACCA+TGG + chr4_1:79354724-79354743 None:intergenic 45.0%
AATGCACAGGTTCAAGGAAG+GGG + chr4_1:79354794-79354813 None:intergenic 45.0%
!! CATTGCTGACTTGCTGTAGA+TGG - chr4_1:79354842-79354861 Msa0575470:intron 45.0%
! TTGCTGTAGATGGACTTCTC+AGG - chr4_1:79354852-79354871 Msa0575470:intron 45.0%
! TGCTGTAGATGGACTTCTCA+GGG - chr4_1:79354853-79354872 Msa0575470:intron 45.0%
ATTAACAAGGCCCGGATGAA+AGG + chr4_1:79354971-79354990 None:intergenic 45.0%
GGGAACTAATTAACAAGGCC+CGG + chr4_1:79354979-79354998 None:intergenic 45.0%
! TACCCTTGAGGTACCTGTTA+AGG + chr4_1:79355122-79355141 None:intergenic 45.0%
!!! TGTTTTGGTGATGTGCTTGC+AGG - chr4_1:79355187-79355206 Msa0575470:intron 45.0%
CCTCCCTAGTTGTGGAAAAT+CGG + chr4_1:79355243-79355262 None:intergenic 45.0%
TGACCGTTAAAAGCAAGCAC+AGG + chr4_1:79355464-79355483 None:intergenic 45.0%
! GCTCTCAACCATTTGCTAGT+CGG + chr4_1:79355584-79355603 None:intergenic 45.0%
ACGACTAATCGTTGGCAGAT+TGG - chr4_1:79355804-79355823 Msa0575470:intron 45.0%
TTGGGGCATAATTGACAGCA+TGG - chr4_1:79355858-79355877 Msa0575470:intron 45.0%
TTTCTTGGGGTAGTCCTCAA+TGG - chr4_1:79355918-79355937 Msa0575470:intron 45.0%
ACGGACGCATACAAGTACAT+GGG + chr4_1:79355967-79355986 None:intergenic 45.0%
TACGGACGCATACAAGTACA+TGG + chr4_1:79355968-79355987 None:intergenic 45.0%
! CTGAAGCAACAGGTCTTGTA+CGG + chr4_1:79355986-79356005 None:intergenic 45.0%
! GATCCACCTAAGATTAGCTG+TGG - chr4_1:79356061-79356080 Msa0575470:intron 45.0%
ACTACTGAAACGAGCTTCGT+AGG - chr4_1:79356273-79356292 Msa0575470:five_prime_UTR 45.0%
!!! TTCATTTATAATTAATTTTT+GGG - chr4_1:79347424-79347443 Msa0575470:intron 5.0%
!! AATATAATCTAATAAATTAA+TGG - chr4_1:79350405-79350424 Msa0575470:CDS 5.0%
!! ATATAATCTAATAAATTAAT+GGG - chr4_1:79350406-79350425 Msa0575470:CDS 5.0%
!!! TAAATTTTATCTTTTTTTAT+TGG - chr4_1:79353741-79353760 Msa0575470:intron 5.0%
AGCACAGCACTGCACTTCAA+GGG + chr4_1:79346990-79347009 None:intergenic 50.0%
! AGATTCTTTCTGAGGGAGGG+AGG + chr4_1:79347051-79347070 None:intergenic 50.0%
GAACGTAACGTACCCATGGA+TGG + chr4_1:79347077-79347096 None:intergenic 50.0%
TAAGGAATCAGGAGAGTCGG+AGG - chr4_1:79347749-79347768 Msa0575470:intron 50.0%
!! GAGATCGAGAGCATCGTATG+AGG - chr4_1:79348723-79348742 Msa0575470:intron 50.0%
AGATCCAAAGCAGGAGGTTC+AGG - chr4_1:79348766-79348785 Msa0575470:intron 50.0%
TGTTGGTCGTAGACCACTAG+AGG - chr4_1:79349245-79349264 Msa0575470:intron 50.0%
GTTGGTCGTAGACCACTAGA+GGG - chr4_1:79349246-79349265 Msa0575470:intron 50.0%
TTGGTCGTAGACCACTAGAG+GGG - chr4_1:79349247-79349266 Msa0575470:intron 50.0%
CTAGTAAGAGGTGAGGTGGA+AGG - chr4_1:79349586-79349605 Msa0575470:CDS 50.0%
GAGGTGGAAGGGAATATACG+TGG - chr4_1:79349598-79349617 Msa0575470:CDS 50.0%
GGTGGAAGGGAATATACGTG+GGG - chr4_1:79349600-79349619 Msa0575470:CDS 50.0%
GTGGAAGGGAATATACGTGG+GGG - chr4_1:79349601-79349620 Msa0575470:CDS 50.0%
! TTGCCTGATTTTGTGGCAGC+AGG - chr4_1:79349635-79349654 Msa0575470:CDS 50.0%
! TGCCTGATTTTGTGGCAGCA+GGG - chr4_1:79349636-79349655 Msa0575470:CDS 50.0%
TTCCCTGCTGCCACAAAATC+AGG + chr4_1:79349641-79349660 None:intergenic 50.0%
! GATTTTGTGGCAGCAGGGAA+AGG - chr4_1:79349641-79349660 Msa0575470:CDS 50.0%
TAAAGAAGAGCTGTTGGGCG+TGG - chr4_1:79349741-79349760 Msa0575470:intron 50.0%
AAAGAAGAGCTGTTGGGCGT+GGG - chr4_1:79349742-79349761 Msa0575470:intron 50.0%
GATGCTGGCAAGTCTACAAC+TGG - chr4_1:79350095-79350114 Msa0575470:intron 50.0%
! GGCCAGATACTTTTCCTCAG+TGG - chr4_1:79350119-79350138 Msa0575470:intron 50.0%
GATCATCAACCTGACCACTG+AGG + chr4_1:79350136-79350155 None:intergenic 50.0%
ACTAAGTGGGGTCAGCTACA+TGG + chr4_1:79350579-79350598 None:intergenic 50.0%
ATGTAGCTGACCCCACTTAG+TGG - chr4_1:79350578-79350597 Msa0575470:CDS 50.0%
TGTAGCTGACCCCACTTAGT+GGG - chr4_1:79350579-79350598 Msa0575470:CDS 50.0%
TGACCCCACTTAGTGGGATA+AGG - chr4_1:79350585-79350604 Msa0575470:CDS 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr4_1:79350593-79350612 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr4_1:79350590-79350609 Msa0575470:CDS 50.0%
AGGGGGATTTGACCCTTCTA+AGG - chr4_1:79350628-79350647 Msa0575470:CDS 50.0%
GAGCCAAATCTTGTTGGGAG+AGG - chr4_1:79350805-79350824 Msa0575470:CDS 50.0%
GCCAAATCTTGTTGGGAGAG+GGG - chr4_1:79350807-79350826 Msa0575470:CDS 50.0%
TCCCCTCTCCCAACAAGATT+TGG + chr4_1:79350811-79350830 None:intergenic 50.0%
AATCTTGTTGGGAGAGGGGA+TGG - chr4_1:79350811-79350830 Msa0575470:CDS 50.0%
CAGGGGAAGACTGTTGAAGT+TGG - chr4_1:79351074-79351093 Msa0575470:intron 50.0%
AGGCCCAGAAAACTGATCTG+AGG + chr4_1:79351177-79351196 None:intergenic 50.0%
! CGGAAGGGAGAGTTTGAAAC+TGG - chr4_1:79351541-79351560 Msa0575470:intron 50.0%
!! GAGGGTATTTAGGTCGTGCA+AGG - chr4_1:79352151-79352170 Msa0575470:CDS 50.0%
CCGCTCTGCAAGTTATTGTG+TGG - chr4_1:79352187-79352206 Msa0575470:intron 50.0%
!!! GGTCTTTTGGGATCTCCCAT+AGG + chr4_1:79352436-79352455 None:intergenic 50.0%
GAAAATCGGGTTAAACGCGC+TGG - chr4_1:79352820-79352839 Msa0575470:intron 50.0%
GGGTTCGTCTTGTCTAGTGT+TGG - chr4_1:79352901-79352920 Msa0575470:intron 50.0%
GACAACGTGTGTATCCTCTG+TGG - chr4_1:79353458-79353477 Msa0575470:intron 50.0%
TGTGTATCCTCTGTGGCATC+TGG - chr4_1:79353465-79353484 Msa0575470:intron 50.0%
CTAACTTCCAGATGCCACAG+AGG + chr4_1:79353475-79353494 None:intergenic 50.0%
GCACATCCACTCTGTAGTTG+AGG - chr4_1:79353581-79353600 Msa0575470:intron 50.0%
!!! GCCCCATGAGCTAGCTTTTT+GGG + chr4_1:79354003-79354022 None:intergenic 50.0%
CGAAATTAGACATCTGGCGG+TGG - chr4_1:79354118-79354137 Msa0575470:intron 50.0%
TGGCCCAATGGATCCATGAT+AGG - chr4_1:79354138-79354157 Msa0575470:intron 50.0%
GATGGTAGCATGGCCTATCA+TGG + chr4_1:79354154-79354173 None:intergenic 50.0%
! CTTTGGAAAGAGGGCAACAG+TGG + chr4_1:79354459-79354478 None:intergenic 50.0%
CACTGTTGCCCTCTTTCCAA+AGG - chr4_1:79354457-79354476 Msa0575470:CDS 50.0%
! CGCAGATTGCCTTTGGAAAG+AGG + chr4_1:79354469-79354488 None:intergenic 50.0%
TGATTGGCGCAGATTGCCTT+TGG + chr4_1:79354476-79354495 None:intergenic 50.0%
CAAGACCAACTGTTGCTCCA+TGG - chr4_1:79354690-79354709 Msa0575470:intron 50.0%
CAACCATGGAGCAACAACCA+TGG + chr4_1:79354710-79354729 None:intergenic 50.0%
ACCACTGAGTTCATGGCAGA+CGG + chr4_1:79354760-79354779 None:intergenic 50.0%
CTTGGGGAGACAAAATGCAC+AGG + chr4_1:79354807-79354826 None:intergenic 50.0%
! AGATGGACTTCTCAGGGCTA+TGG - chr4_1:79354859-79354878 Msa0575470:intron 50.0%
! CCGATTTTCCACAACTAGGG+AGG - chr4_1:79355240-79355259 Msa0575470:CDS 50.0%
AGAGTGAACCTCCCTAGTTG+TGG + chr4_1:79355251-79355270 None:intergenic 50.0%
AGGTTCACTCTTCGCACTGA+AGG - chr4_1:79355260-79355279 Msa0575470:CDS 50.0%
CACTCTTCGCACTGAAGGTA+AGG - chr4_1:79355265-79355284 Msa0575470:CDS 50.0%
GGCATTTCTGCAGAGACAGA+TGG - chr4_1:79355825-79355844 Msa0575470:intron 50.0%
TTCTGCAGAGACAGATGGAG+TGG - chr4_1:79355830-79355849 Msa0575470:intron 50.0%
GGAGAGTTAGTTGTTGCAGC+TGG - chr4_1:79355939-79355958 Msa0575470:intron 50.0%
CTGAAACGAGCTTCGTAGGA+TGG - chr4_1:79356277-79356296 Msa0575470:five_prime_UTR 50.0%
CAGCACAGCACTGCACTTCA+AGG + chr4_1:79346991-79347010 None:intergenic 55.0%
TGAGCCTGAACCTCCTGCTT+TGG + chr4_1:79348773-79348792 None:intergenic 55.0%
AAAGCAGGAGGTTCAGGCTC+AGG - chr4_1:79348772-79348791 Msa0575470:intron 55.0%
! GAGGCCGAGCCAAAAGGTAT+TGG - chr4_1:79348800-79348819 Msa0575470:intron 55.0%
!! AACAGGGGTATCCCCTCTAG+TGG + chr4_1:79349261-79349280 None:intergenic 55.0%
AAGAAGAGCTGTTGGGCGTG+GGG - chr4_1:79349743-79349762 Msa0575470:intron 55.0%
GCTGGCAAGTCTACAACTGG+AGG - chr4_1:79350098-79350117 Msa0575470:intron 55.0%
! GGCAAGGTACTTCACTGACG+TGG - chr4_1:79350317-79350336 Msa0575470:intron 55.0%
GGGTGTGACTAAGCTGCTTG+TGG - chr4_1:79351615-79351634 Msa0575470:CDS 55.0%
GGCAGACAGACAGAGAGAGA+GGG + chr4_1:79351692-79351711 None:intergenic 55.0%
AGGCAGACAGACAGAGAGAG+AGG + chr4_1:79351693-79351712 None:intergenic 55.0%
TGGGGATTGTCGCATCTTGC+TGG - chr4_1:79352053-79352072 Msa0575470:intron 55.0%
TCGCATCTTGCTGGATGCTC+TGG - chr4_1:79352062-79352081 Msa0575470:intron 55.0%
!! TTGCTGGATGCTCTGGAGCT+TGG - chr4_1:79352069-79352088 Msa0575470:intron 55.0%
!! TGCTGGATGCTCTGGAGCTT+GGG - chr4_1:79352070-79352089 Msa0575470:intron 55.0%
GAACCCATGAGCCCCGATAT+TGG + chr4_1:79352328-79352347 None:intergenic 55.0%
!!! CGCCCCATGAGCTAGCTTTT+TGG + chr4_1:79354004-79354023 None:intergenic 55.0%
AAAGCTAGCTCATGGGGCGA+AGG - chr4_1:79354005-79354024 Msa0575470:intron 55.0%
AATGTGGGACTCTCGTGCTC+AGG - chr4_1:79354069-79354088 Msa0575470:intron 55.0%
CGTGCTCAGGACTGGATATC+TGG - chr4_1:79354082-79354101 Msa0575470:intron 55.0%
GCTCCATGGTTGTTGCTCCA+TGG - chr4_1:79354704-79354723 Msa0575470:intron 55.0%
ACAGATGGAGTGGCAGCGTT+GGG - chr4_1:79355840-79355859 Msa0575470:intron 55.0%
GGTTCAGGCTCAGGCTGTTG+AGG - chr4_1:79348781-79348800 Msa0575470:intron 60.0%
GCTGTTGAGGCCGAGCCAAA+AGG - chr4_1:79348794-79348813 Msa0575470:intron 60.0%
! AAAGGACCTCTAGGGGGGGA+GGG + chr4_1:79352498-79352517 None:intergenic 60.0%
! TAAAGGACCTCTAGGGGGGG+AGG + chr4_1:79352499-79352518 None:intergenic 60.0%
GCCGTCTGCCATGAACTCAG+TGG - chr4_1:79354756-79354775 Msa0575470:intron 60.0%
TTTCCATGCAGGCGACCCAG+TGG + chr4_1:79355737-79355756 None:intergenic 60.0%
GACAGATGGAGTGGCAGCGT+TGG - chr4_1:79355839-79355858 Msa0575470:intron 60.0%
CAGATGGAGTGGCAGCGTTG+GGG - chr4_1:79355841-79355860 Msa0575470:intron 60.0%
! AAGGACCTCTAGGGGGGGAG+GGG + chr4_1:79352497-79352516 None:intergenic 65.0%
CGGGTTAAACGCGCTGGACC+TGG - chr4_1:79352826-79352845 Msa0575470:intron 65.0%
GGGACTCTCGTGCTCAGGAC+TGG - chr4_1:79354074-79354093 Msa0575470:intron 65.0%
GACATCTGGCGGTGGCCCAA+TGG - chr4_1:79354126-79354145 Msa0575470:intron 65.0%
! AGGACCTCTAGGGGGGGAGG+GGG + chr4_1:79352496-79352515 None:intergenic 70.0%
CTGCCACTGGGTCGCCTGCA+TGG - chr4_1:79355731-79355750 Msa0575470:intron 70.0%
TTCCCCCCCTCCCCCCCTAG+AGG - chr4_1:79352489-79352508 Msa0575470:intron 75.0%
! GACCTCTAGGGGGGGAGGGG+GGG + chr4_1:79352494-79352513 None:intergenic 75.0%
! GGACCTCTAGGGGGGGAGGG+GGG + chr4_1:79352495-79352514 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 79346894 79356369 79346894 ID=Msa0575470;Name=Msa0575470
chr4_1 mRNA 79346894 79356369 79346894 ID=Msa0575470-mRNA-1;Parent=Msa0575470;Name=Msa0575470-mRNA-1;_AED=0.22;_eAED=0.22;_QI=186|0.93|1|1|0.87|0.94|17|439|494
chr4_1 exon 79346894 79347425 79346894 ID=Msa0575470-mRNA-1:exon:28302;Parent=Msa0575470-mRNA-1
chr4_1 exon 79349550 79349714 79349550 ID=Msa0575470-mRNA-1:exon:28301;Parent=Msa0575470-mRNA-1
chr4_1 exon 79349800 79349864 79349800 ID=Msa0575470-mRNA-1:exon:28300;Parent=Msa0575470-mRNA-1
chr4_1 exon 79350341 79350476 79350341 ID=Msa0575470-mRNA-1:exon:28299;Parent=Msa0575470-mRNA-1
chr4_1 exon 79350574 79350679 79350574 ID=Msa0575470-mRNA-1:exon:28298;Parent=Msa0575470-mRNA-1
chr4_1 exon 79350802 79350952 79350802 ID=Msa0575470-mRNA-1:exon:28297;Parent=Msa0575470-mRNA-1
chr4_1 exon 79351428 79351492 79351428 ID=Msa0575470-mRNA-1:exon:28296;Parent=Msa0575470-mRNA-1
chr4_1 exon 79351580 79351734 79351580 ID=Msa0575470-mRNA-1:exon:28295;Parent=Msa0575470-mRNA-1
chr4_1 exon 79351853 79351915 79351853 ID=Msa0575470-mRNA-1:exon:28294;Parent=Msa0575470-mRNA-1
chr4_1 exon 79352115 79352186 79352115 ID=Msa0575470-mRNA-1:exon:28293;Parent=Msa0575470-mRNA-1
chr4_1 exon 79352313 79352358 79352313 ID=Msa0575470-mRNA-1:exon:28292;Parent=Msa0575470-mRNA-1
chr4_1 exon 79353056 79353167 79353056 ID=Msa0575470-mRNA-1:exon:28291;Parent=Msa0575470-mRNA-1
chr4_1 exon 79354216 79354305 79354216 ID=Msa0575470-mRNA-1:exon:28290;Parent=Msa0575470-mRNA-1
chr4_1 exon 79354448 79354495 79354448 ID=Msa0575470-mRNA-1:exon:28289;Parent=Msa0575470-mRNA-1
chr4_1 exon 79355236 79355307 79355236 ID=Msa0575470-mRNA-1:exon:28288;Parent=Msa0575470-mRNA-1
chr4_1 exon 79355415 79355456 79355415 ID=Msa0575470-mRNA-1:exon:28287;Parent=Msa0575470-mRNA-1
chr4_1 exon 79356180 79356369 79356180 ID=Msa0575470-mRNA-1:exon:28286;Parent=Msa0575470-mRNA-1
chr4_1 five_prime_UTR 79356184 79356369 79356184 ID=Msa0575470-mRNA-1:five_prime_utr;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79356180 79356183 79356180 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79355415 79355456 79355415 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79355236 79355307 79355236 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79354448 79354495 79354448 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79354216 79354305 79354216 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79353056 79353167 79353056 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79352313 79352358 79352313 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79352115 79352186 79352115 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79351853 79351915 79351853 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79351580 79351734 79351580 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79351428 79351492 79351428 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79350802 79350952 79350802 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79350574 79350679 79350574 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79350341 79350476 79350341 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79349800 79349864 79349800 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79349550 79349714 79349550 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 CDS 79347333 79347425 79347333 ID=Msa0575470-mRNA-1:cds;Parent=Msa0575470-mRNA-1
chr4_1 three_prime_UTR 79346894 79347332 79346894 ID=Msa0575470-mRNA-1:three_prime_utr;Parent=Msa0575470-mRNA-1
Gene Sequence

>Msa0575470

ATGGATATTGAGGAGGACATTCGTTCTTTACAGCTTGACTCAGCAGAAGACATTAATGGGGTGGTAAATCCAGAGCATGAAAAGCAAGATGTTGATAATGTTGATAAGATGGATGAAGATCCAAAGCAGGAGGTTCAGGCTCAGGCTGTTGAGGCCGAGCCAAAAGCGAAAGATAAGGACATTCCTTCTGTTCAAGATGAAGAAGTCGAGCAAACGGAGAAAAGGCACTTGAATGTTGTGTTTATTGGGCATGTTGATGCTGGCAAGTCTACAACTGGAGGCCAGATACTTTTCCTCAGTGGTCAGGTTGATGATCGAACTATCCAAAAATACGAGAAAGAAGCTAAGGACAAAAGTCGAGAAAGCTGGTACATGGCTTATATTATGGACACAAATGAGGAGGAGAGAGTAAAGGGGAAGACTGTTGAAGTTGGAAGAGCACATTTTGAGACAGAGACAACAAGGTTCACCATTTTGGATGCACCTGGCCACAAGAGCTATGTTCCTAATATGATCAGTGGTGCATCTCAAGCTGATATTGGAGTGTTGGTAATTTCTGCTCGGAAGGGAGAGTTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGACTAAGCTGCTTGTGGTTGTCAATAAAATGGACGATCCTACAGTAAACTGGTCAAAAGAAAGGTATGATGAAATCGAGTCAAAGATGATTCCATTTCTAAAGCAATCAGGATACCATGTAAAAAAAGATGTCTTGTTTTTACCAATATCGGGGCTCATGGGTTCAAACTTAAAAACAAGAATGGATAGAAGCATTTGTTCATGGTGGGATGGGCCTTGCTTATTTGAAGCCCTTGATAGTATCGAAGTTCCTATGGGAGATCCCAAAAGACCTTTCAGGATGCCTATAATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGCAAAGTTGAATCTGGTACTATTCGGGAGGGAGATTCCATTTTCATCATGCCAAATAAGGATCAAGTAAAAGTTGTTGCTATATATATTGATGAAAATCGGGTTAAACGCGCTGGACCTGGTGAAAATTTACGCGTTCGATTATCTGGTGTTGAAGAAGAAGACATATTGGCTGGGTTCGTCTTGTCTAGTGTTGCAAATCCAATATCAGCAGTTACTGAGTTTGTTGCTCAGTTGGCAATCCTTGAATTACTAGACAACGCTATTTTTACTGCTGGATACAAAGCTGTTCTGCACATCCACTCTGTAGTTGAGGAATGTGAGATTGTCGAGCTATTACAACAAATTGATCCAAAGACAAAGAAGCCCATGAAAAAGAAAGTTCTATTTGTAAAGAATGGTGCTGTTGTATTATGCCGTGTTCAGAGACAGATGGAGTGGCAGCGTTGGGGCATAATTGACAGCATGGAGTCTGCCATATATCCATTTCGGAAATTAGGTTGCATTTTCTTGGGGTAG

Protein sequence

>Msa0575470

MDIEEDIRSLQLDSAEDINGVVNPEHEKQDVDNVDKMDEDPKQEVQAQAVEAEPKAKDKDIPSVQDEEVEQTEKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWSKERYDEIESKMIPFLKQSGYHVKKDVLFLPISGLMGSNLKTRMDRSICSWWDGPCLFEALDSIEVPMGDPKRPFRMPIIDKFKDMGTVVMGKVESGTIREGDSIFIMPNKDQVKVVAIYIDENRVKRAGPGENLRVRLSGVEEEDILAGFVLSSVANPISAVTEFVAQLAILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVLCRVQRQMEWQRWGIIDSMESAIYPFRKLGCIFLG*