AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663240 MtrunA17_Chr8g0392301 92.661 109 8 0 5 113 875 983 1.62e-64 217
Msa0663240 MtrunA17_Chr8g0392301 75.188 133 12 2 132 243 116 248 1.51e-54 189
Msa0663240 MtrunA17_Chr8g0377481 64.815 108 31 1 5 112 855 955 7.45e-40 147
Msa0663240 MtrunA17_Chr8g0377481 45.638 149 44 3 132 243 111 259 2.83e-27 110
Msa0663240 MtrunA17_Chr3g0122391 62.963 108 32 1 5 112 913 1012 4.41e-37 139
Msa0663240 MtrunA17_Chr3g0122391 46.980 149 42 3 132 243 159 307 4.24e-28 113
Msa0663240 MtrunA17_Chr5g0447641 57.265 117 41 2 4 113 1087 1201 4.58e-35 133
Msa0663240 MtrunA17_Chr5g0447641 45.223 157 50 4 125 246 332 487 2.19e-29 117
Msa0663240 MtrunA17_Chr2g0311191 67.442 86 18 3 174 258 22 98 5.04e-26 102
Msa0663240 MtrunA17_Chr3g0136601 31.148 122 71 2 1 110 814 934 1.45e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663240 AT2G01830.2 69.725 109 26 1 5 113 959 1060 2.43e-43 157
Msa0663240 AT2G01830.2 65.909 132 23 3 132 241 204 335 3.18e-43 157
Msa0663240 AT2G01830.1 69.725 109 26 1 5 113 936 1037 2.59e-43 157
Msa0663240 AT2G01830.1 65.909 132 23 3 132 241 181 312 3.32e-43 157
Msa0663240 AT2G01830.4 69.725 109 26 1 5 113 936 1037 2.59e-43 157
Msa0663240 AT2G01830.4 65.909 132 23 3 132 241 181 312 3.32e-43 157
Msa0663240 AT2G01830.6 69.725 109 26 1 5 113 936 1037 2.59e-43 157
Msa0663240 AT2G01830.6 65.909 132 23 3 132 241 181 312 3.32e-43 157
Msa0663240 AT2G01830.3 69.725 109 26 1 5 113 936 1037 2.59e-43 157
Msa0663240 AT2G01830.3 65.909 132 23 3 132 241 181 312 3.32e-43 157
Msa0663240 AT2G01830.5 69.725 109 26 1 5 113 948 1049 2.65e-43 157
Msa0663240 AT2G01830.5 65.909 132 23 3 132 241 193 324 2.86e-43 157
Msa0663240 AT1G27320.1 64.103 117 37 2 1 112 900 1016 9.14e-43 156
Msa0663240 AT1G27320.1 44.295 149 46 3 132 243 169 317 7.23e-26 107
Msa0663240 AT5G35750.1 64.103 117 37 2 5 116 1049 1165 6.56e-42 153
Msa0663240 AT5G35750.1 48.667 150 42 3 132 246 308 457 2.96e-31 122

Find 368 sgRNAs with CRISPR-Local

Find 715 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGAGCTGTCTAGAAATT+TGG 0.120024 4_4:+1929948 Msa0663240:five_prime_UTR
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 4_4:-1936003 None:intergenic
CATTATTAAGTTTGTACTTT+TGG 0.162606 4_4:+1931072 Msa0663240:five_prime_UTR
TAAATTCCGTTTACCTATAT+TGG 0.165693 4_4:+1937417 Msa0663240:CDS
ACACTGCCAGTTATGAATTT+TGG 0.177356 4_4:-1935235 None:intergenic
AGCTACTGGTAAAGCATTTC+TGG 0.184947 4_4:+1934423 Msa0663240:five_prime_UTR
GCTGTGCTCGTTGGCTCTTT+TGG 0.262041 4_4:+1939217 Msa0663240:three_prime_UTR
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 4_4:+1936686 Msa0663240:five_prime_UTR
TTTCACATTACTATTACTAT+TGG 0.267792 4_4:+1939448 Msa0663240:three_prime_UTR
TGAGAACCCAACAACCTAAA+AGG 0.270552 4_4:-1934451 None:intergenic
TGAGAACCCAACAACCTAAA+AGG 0.270552 4_4:-1938420 None:intergenic
TTGAAGCAACTCGTCGAATT+CGG 0.272691 4_4:+1937338 Msa0663240:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 4_4:+1933817 Msa0663240:five_prime_UTR
AATAAATTTATCGGGCCTTT+TGG 0.277715 4_4:+1939142 Msa0663240:three_prime_UTR
TCCAATCTGAAGCTCGAAAA+TGG 0.279042 4_4:+1929211 Msa0663240:five_prime_UTR
AGCTCTTCTGTTGTTGGGTT+GGG 0.283441 4_4:-1938492 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.284727 4_4:-1934951 None:intergenic
AAGAATATTGTTCTTATAGA+AGG 0.285105 4_4:+1931369 Msa0663240:five_prime_UTR
TCTGATTAAGATTAATGTTA+TGG 0.285743 4_4:+1935263 Msa0663240:five_prime_UTR
CTAAGCGCGAGACTAATATT+TGG 0.289326 4_4:+1939183 Msa0663240:three_prime_UTR
AGCTGGAGATATCAAGAAAT+TGG 0.296400 4_4:+1932457 Msa0663240:five_prime_UTR
CAAAAGTACAAACTTAATAA+TGG 0.297310 4_4:-1931071 None:intergenic
TGAATGCTTGGATATCTATT+AGG 0.305363 4_4:-1931600 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 4_4:-1935695 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 4_4:+1937339 Msa0663240:CDS
CCATTATCTCTTTCCTATAC+AGG 0.329932 4_4:+1932842 Msa0663240:five_prime_UTR
TAGAAAATAGAAGTTTATAG+AGG 0.332862 4_4:-1931459 None:intergenic
GTCAAAATAAATAAATTTAT+CGG 0.334602 4_4:+1939133 Msa0663240:three_prime_UTR
GTAACAAAGCACATATAAAA+AGG 0.337845 4_4:+1932726 Msa0663240:five_prime_UTR
CTGATTAAGATTAATGTTAT+GGG 0.339688 4_4:+1935264 Msa0663240:five_prime_UTR
GAGTGCAGAAGTAATGTAAA+AGG 0.340817 4_4:+1932541 Msa0663240:five_prime_UTR
GGCTTTAAACCCTCTAAAAC+TGG 0.340964 4_4:-1936046 None:intergenic
GTGTTAGCTGGTGTTGTAAT+GGG 0.347004 4_4:+1933602 Msa0663240:intron
CTGGCATGAAAATTCTATCT+TGG 0.347070 4_4:-1935822 None:intergenic
TTCACATTACTATTACTATT+GGG 0.347971 4_4:+1939449 Msa0663240:three_prime_UTR
AGCTCTTATGTTGTTGGGTT+GGG 0.355867 4_4:-1934523 None:intergenic
ATCTAGACTCCGACACGTTC+CGG 0.356468 4_4:+1939088 Msa0663240:three_prime_UTR
ATGTGCTAAACTCCGCATTC+TGG 0.359839 4_4:-1939000 None:intergenic
CTCTGAATCTGAACAGTCTT+AGG 0.361731 4_4:-1929856 None:intergenic
CAAGTTTGATGCTTGCTTCA+AGG 0.362213 4_4:+1936903 Msa0663240:CDS
CTAACAACCCTCTTACTCAT+TGG 0.363261 4_4:+1932879 Msa0663240:five_prime_UTR
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 4_4:-1934499 None:intergenic
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 4_4:-1938468 None:intergenic
AAACATCACCTTCTTTGTAT+TGG 0.366658 4_4:-1934969 None:intergenic
CCTCGTCGCAATGGCGGTTC+CGG 0.368561 4_4:+1932628 Msa0663240:five_prime_UTR
TATCCGTGTATCAGTCTATA+TGG 0.368758 4_4:+1930012 Msa0663240:five_prime_UTR
TAATGAGCTCTTATGTTGTT+GGG 0.369742 4_4:-1934528 None:intergenic
TTAATGAGCTCTTCTGTTGT+TGG 0.370178 4_4:-1938498 None:intergenic
CTTAGGCCACTTGTCGAATC+TGG 0.370934 4_4:-1929839 None:intergenic
TCTAATCCTATTTGATCTCC+TGG 0.371886 4_4:-1931640 None:intergenic
AATTTACTTGGTCAACTTGC+TGG 0.372381 4_4:+1934894 Msa0663240:five_prime_UTR
AACTTTCAGGTTGGGTCTGC+CGG 0.373589 4_4:-1939107 None:intergenic
GGATATTCAAATGCAAGAAA+TGG 0.373656 4_4:+1936924 Msa0663240:CDS
TTTAAAGCCGTTGTGGTTGA+TGG 0.373929 4_4:+1936060 Msa0663240:five_prime_UTR
TTGACTCCAACTTTCAGGTT+GGG 0.377248 4_4:-1939115 None:intergenic
AGTCGCAAACGCCATCAATA+AGG 0.379169 4_4:+1936143 Msa0663240:five_prime_UTR
TTATTGCATCTACAGCAAAA+TGG 0.379494 4_4:+1933781 Msa0663240:five_prime_UTR
GATCTTCAGTGTGCGGCAAC+TGG 0.379917 4_4:+1936523 Msa0663240:five_prime_UTR
GAAACAATGTTTACCTGTAT+AGG 0.381243 4_4:-1932855 None:intergenic
TTTCTAGAAGTCGAGCTATC+TGG 0.382233 4_4:-1935841 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.382581 4_4:-1938497 None:intergenic
TTAATGAGCTCTTATGTTGT+TGG 0.383934 4_4:-1934529 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.384098 4_4:-1934950 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 4_4:-1936087 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 4_4:-1935547 None:intergenic
ATTTAATGGACCACACACTA+TGG 0.386966 4_4:+1931230 Msa0663240:five_prime_UTR
TTTCACTTCGCAAATTTCAT+TGG 0.387078 4_4:+1929290 Msa0663240:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 4_4:+1934205 Msa0663240:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 4_4:+1938179 Msa0663240:CDS
AACTTGTTGATGCTTCAATA+TGG 0.391748 4_4:-1931540 None:intergenic
GTATGACGACTTGGATTTCA+TGG 0.395066 4_4:+1939056 Msa0663240:three_prime_UTR
GAAAACCCAGGAGATCAAAT+AGG 0.395401 4_4:+1931634 Msa0663240:five_prime_UTR
GCTACAAATTCAATTAATAA+AGG 0.396305 4_4:-1931420 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 4_4:-1937430 None:intergenic
TTATGAACAAGTCACCTAGA+TGG 0.407870 4_4:+1935758 Msa0663240:five_prime_UTR
CTTCTGTTGTTGGGTTGGGA+GGG 0.408038 4_4:-1938488 None:intergenic
TGAACAATTCCTTCCTCAAA+AGG 0.408776 4_4:-1937514 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 4_4:+1933837 Msa0663240:five_prime_UTR
TAAGTGCCTAGCTGAACTAA+TGG 0.413074 4_4:+1935897 Msa0663240:five_prime_UTR
TGTGTCGAAGACACTGGAAT+TGG 0.420012 4_4:+1935784 Msa0663240:five_prime_UTR
CACAGAACCCAATGAGTAAG+AGG 0.421143 4_4:-1932887 None:intergenic
GTTGCTTTGTATTCTTCTGA+TGG 0.422242 4_4:+1933748 Msa0663240:five_prime_UTR
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 4_4:-1935548 None:intergenic
ACCGAGCCAAAATTCATAAC+TGG 0.425503 4_4:+1935229 Msa0663240:five_prime_UTR
AACTATGGTGGTACCGGCAT+TGG 0.427397 4_4:+1935862 Msa0663240:five_prime_UTR
TAACAACCCTCTTACTCATT+GGG 0.429622 4_4:+1932880 Msa0663240:five_prime_UTR
TGAAATTTGCGAAGTGAAAA+CGG 0.429932 4_4:-1929286 None:intergenic
CCAATCGGATATTGAATGCT+TGG 0.430148 4_4:-1931612 None:intergenic
CCTGTATAGGAAAGAGATAA+TGG 0.430433 4_4:-1932842 None:intergenic
AGCTCGACTTCTAGAAACTA+TGG 0.431958 4_4:+1935847 Msa0663240:five_prime_UTR
CTGAAGGTGGTGGAGGGGAA+AGG 0.432104 4_4:+1932075 Msa0663240:intron
ACCGGAGCTGAAGGTGGTGG+AGG 0.432907 4_4:+1932068 Msa0663240:intron
GAGCTCTTCTGTTGTTGGGT+TGG 0.436168 4_4:-1938493 None:intergenic
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 4_4:+1934206 Msa0663240:five_prime_UTR
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 4_4:+1938180 Msa0663240:CDS
GGCTTCTACGGGTAATGTTG+TGG 0.441520 4_4:+1939032 Msa0663240:exon
CGAGTTAACTCTTTGTGCAT+TGG 0.441555 4_4:-1934133 None:intergenic
AGTGTTAGCTGGTGTTGTAA+TGG 0.441960 4_4:+1933601 Msa0663240:intron
TTAATTGGAGGTAGTTATGT+TGG 0.442968 4_4:+1934840 Msa0663240:intron
GCCACTACCACCTTCAGCTC+CGG 0.444267 4_4:-1931715 None:intergenic
TATCAGTCTATATGGTTTGT+AGG 0.444423 4_4:+1930020 Msa0663240:five_prime_UTR
AGCGGTCCTAGCCGTATATT+CGG 0.445484 4_4:-1934082 None:intergenic
GTTGGTGGCGATGGCGGTTG+CGG 0.446160 4_4:+1932167 Msa0663240:five_prime_UTR
AATAGAAAGCCCGCAACAAA+TGG 0.447886 4_4:+1935538 Msa0663240:five_prime_UTR
TTTATAAGCCGGCCGCAGAT+TGG 0.449436 4_4:+1935934 Msa0663240:five_prime_UTR
TCCCTTGTGGAAAATTTACT+TGG 0.449628 4_4:+1934882 Msa0663240:five_prime_UTR
TCTTCTGTTGTTGGGTTGGG+AGG 0.450263 4_4:-1938489 None:intergenic
TGGCATGAAAATTCTATCTT+GGG 0.450533 4_4:-1935821 None:intergenic
CAAAGAAACAGCCTTATTGA+TGG 0.453163 4_4:-1936154 None:intergenic
TAAGCGCGAGACTAATATTT+GGG 0.454578 4_4:+1939184 Msa0663240:three_prime_UTR
GCTTCTACGGGTAATGTTGT+GGG 0.454753 4_4:+1939033 Msa0663240:exon
GAAGAAGTTGTGCATACATC+TGG 0.454754 4_4:+1935592 Msa0663240:five_prime_UTR
CATACGGGGACTGGCTTCTA+CGG 0.455310 4_4:+1939020 Msa0663240:CDS
ACTTGAACCTTCAGCTGAAA+AGG 0.457162 4_4:-1931514 None:intergenic
TTTCAACATTTAGCATGTAC+TGG 0.457331 4_4:+1930124 Msa0663240:five_prime_UTR
AGATGTATGCACAACTTCTT+CGG 0.457816 4_4:-1935590 None:intergenic
TCAAAATAAATAAATTTATC+GGG 0.458085 4_4:+1939134 Msa0663240:three_prime_UTR
TTCAAAGTTCCAAGAACAAA+CGG 0.459844 4_4:+1933670 Msa0663240:five_prime_UTR
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 4_4:+1933838 Msa0663240:five_prime_UTR
TCCAATAACTGAGGTGAAGA+AGG 0.463469 4_4:+1936002 Msa0663240:five_prime_UTR
TCAAAGTTCCAAGAACAAAC+GGG 0.463568 4_4:+1933671 Msa0663240:five_prime_UTR
AATAAGGCTGTTTCTTTGTG+TGG 0.465190 4_4:+1936159 Msa0663240:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 4_4:+1933646 Msa0663240:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 4_4:+1938006 Msa0663240:CDS
TCTTATGTTGTTGGGTTGGG+AGG 0.468813 4_4:-1934520 None:intergenic
GTGACGGCCACACCTGATAT+AGG 0.469948 4_4:+1932568 Msa0663240:five_prime_UTR
CTTATGTTGTTGGGTTGGGA+GGG 0.470141 4_4:-1934519 None:intergenic
ATGGATGAAGTTGGTGGCGA+TGG 0.473168 4_4:+1932158 Msa0663240:five_prime_UTR
CTTGGAACTTTGAAGCCAAA+GGG 0.475089 4_4:-1933661 None:intergenic
TTTGACTCCAACTTTCAGGT+TGG 0.476261 4_4:-1939116 None:intergenic
CAGAAGTAATGTAAAAGGTA+AGG 0.479588 4_4:+1932546 Msa0663240:five_prime_UTR
GAGCTCTTATGTTGTTGGGT+TGG 0.479818 4_4:-1934524 None:intergenic
AACATACTGAGAGCTCCTAC+TGG 0.482031 4_4:+1938378 Msa0663240:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 4_4:+1936108 Msa0663240:five_prime_UTR
ACTGATCCCCTAATCATGTA+TGG 0.483235 4_4:+1934943 Msa0663240:five_prime_UTR
AGGACCGATGGAGTTGTAGA+TGG 0.484578 4_4:+1932098 Msa0663240:five_prime_UTR
ACTATTGCTGCTGTGCTCGT+TGG 0.485368 4_4:+1939208 Msa0663240:three_prime_UTR
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 4_4:+1936501 Msa0663240:five_prime_UTR
AGACGAACAAACTACCAATC+TGG 0.488070 4_4:+1932796 Msa0663240:five_prime_UTR
TCTTCGACACAGACCCATCT+AGG 0.488222 4_4:-1935772 None:intergenic
AAAATCCGCGGTAAATGAAA+AGG 0.489053 4_4:-1935962 None:intergenic
TATGAACAAGTCACCTAGAT+GGG 0.489195 4_4:+1935759 Msa0663240:five_prime_UTR
ATAAGGCTGTTTCTTTGTGT+GGG 0.489234 4_4:+1936160 Msa0663240:five_prime_UTR
TTGTAGATGGTGGTGGCGAA+AGG 0.493499 4_4:+1932111 Msa0663240:five_prime_UTR
GAGAACCCAACAACCTAAAA+GGG 0.497618 4_4:-1934450 None:intergenic
GAGAACCCAACAACCTAAAA+GGG 0.497618 4_4:-1938419 None:intergenic
CCGGAGCTGAAGGTGGTGGA+GGG 0.497991 4_4:+1932069 Msa0663240:intron
GTTGAAGTTGGCGGTGGCAC+CGG 0.498250 4_4:+1931696 Msa0663240:five_prime_UTR
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 4_4:-1936113 None:intergenic
AAGTGCCTAGCTGAACTAAT+GGG 0.499182 4_4:+1935898 Msa0663240:five_prime_UTR
TCATGGCCAATATAGGTAAA+CGG 0.499301 4_4:-1937423 None:intergenic
GTCAAATAAACTTTATAAGC+CGG 0.499856 4_4:+1935923 Msa0663240:five_prime_UTR
TCTGAAAATATCACGCCAAA+AGG 0.500549 4_4:-1939157 None:intergenic
TTCAGATTCAGAGGAAGAAG+AGG 0.501652 4_4:+1929866 Msa0663240:five_prime_UTR
TCTTGTAACTTTGAAGCCAA+AGG 0.501836 4_4:-1938022 None:intergenic
GTGAATAAACACGCTCTTGG+TGG 0.502131 4_4:+1939381 Msa0663240:three_prime_UTR
GAGTTCGATGCGATGGCGAA+AGG 0.502422 4_4:+1931661 Msa0663240:five_prime_UTR
AAGCTTGAGACTTATCGAAA+TGG 0.503401 4_4:+1935562 Msa0663240:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 4_4:+1934200 Msa0663240:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 4_4:+1938174 Msa0663240:CDS
GGCGGTGGCACCGGAGCTGA+AGG 0.503621 4_4:+1931705 Msa0663240:five_prime_UTR
CTTGTAACTTTGAAGCCAAA+GGG 0.504290 4_4:-1938021 None:intergenic
TACTAAAGTGAGAAGGAAAG+AGG 0.504630 4_4:+1933811 Msa0663240:five_prime_UTR
CTAATCCTATTTGATCTCCT+GGG 0.505911 4_4:-1931639 None:intergenic
TTAAAGCCGTTGTGGTTGAT+GGG 0.511535 4_4:+1936061 Msa0663240:five_prime_UTR
GGCAGACCCAACCTGAAAGT+TGG 0.512293 4_4:+1939109 Msa0663240:three_prime_UTR
ATTGGAGGTAGTTATGTTGG+AGG 0.513150 4_4:+1934843 Msa0663240:intron
TGAGCTATCTTGATGGATGT+AGG 0.513496 4_4:+1930959 Msa0663240:five_prime_UTR
GATGGCGGTTGCGGTGGTGT+TGG 0.513633 4_4:+1932176 Msa0663240:five_prime_UTR
AATGCGGAGTTTAGCACATA+CGG 0.514945 4_4:+1939004 Msa0663240:CDS
ATTAGGGCAATGGATGAAGT+TGG 0.517441 4_4:+1932149 Msa0663240:five_prime_UTR
AGTTTAGCACATACGGGGAC+TGG 0.518029 4_4:+1939011 Msa0663240:CDS
AGAAAATAGAAGTTTATAGA+GGG 0.518998 4_4:-1931458 None:intergenic
TTAACATGGTTTAATCATTG+AGG 0.522179 4_4:-1930856 None:intergenic
TCATGGGTTTGTGGAGAGGA+CGG 0.522273 4_4:+1936500 Msa0663240:five_prime_UTR
TTCAAATGCAAGAAATGGAC+GGG 0.522978 4_4:+1936929 Msa0663240:CDS
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 4_4:+1937470 Msa0663240:CDS
AACACTCTTCATATGTAGCA+TGG 0.525664 4_4:-1937459 None:intergenic
GAAGCCACTGAGAACTAGTA+TGG 0.525821 4_4:+1936659 Msa0663240:five_prime_UTR
GGAGGGGAAAGGAGGACCGA+TGG 0.526035 4_4:+1932086 Msa0663240:five_prime_UTR
ATAATGATAGCTAGAGCTAC+TGG 0.526297 4_4:+1934409 Msa0663240:five_prime_UTR
TTTAAAGACAATGGAAAGAG+AGG 0.526312 4_4:+1934191 Msa0663240:five_prime_UTR
GGAGATGTACATGGTGGTTG+TGG 0.527779 4_4:+1932203 Msa0663240:five_prime_UTR
GATGGAGAGGACGGCGAATG+AGG 0.528403 4_4:+1937363 Msa0663240:CDS
GAGCTATCTTGATGGATGTA+GGG 0.529146 4_4:+1930960 Msa0663240:five_prime_UTR
CAAATTGTAACAAATCTAGT+TGG 0.529505 4_4:+1935296 Msa0663240:five_prime_UTR
ATTGTGAATAAACACGCTCT+TGG 0.529790 4_4:+1939378 Msa0663240:three_prime_UTR
ATGGATTACATCTGCTGTCA+TGG 0.530208 4_4:-1937440 None:intergenic
CTATTGATATGATGTCTTGA+GGG 0.530839 4_4:+1934280 Msa0663240:five_prime_UTR
AGTCTGAAAGGAGATTAAAC+AGG 0.531683 4_4:-1929131 None:intergenic
CCAAATTTCTAGACAGCTCA+AGG 0.532517 4_4:-1929948 None:intergenic
CAAACTGAAGTTGAACCATC+AGG 0.532569 4_4:-1936744 None:intergenic
AACAGGCAAGAAGAGACAGC+CGG 0.534721 4_4:+1936710 Msa0663240:five_prime_UTR
CATCTACAGCAAAATGGATG+TGG 0.534726 4_4:+1933787 Msa0663240:five_prime_UTR
TCAAGCACAAACCTGGTCAA+TGG 0.535029 4_4:-1933937 None:intergenic
AAACCCTTCTGCCATTGACC+AGG 0.535215 4_4:+1933926 Msa0663240:five_prime_UTR
TCATTCAAGCACATAGAGCC+CGG 0.535674 4_4:+1933711 Msa0663240:five_prime_UTR
CGGTAGCGGCCTTTCGAAAG+TGG 0.535841 4_4:-1938071 None:intergenic
AGTCTGAGCATAGCCACGTT+GGG 0.538627 4_4:-1935157 None:intergenic
AACTCGTCGAATTCGGGAGA+TGG 0.539466 4_4:+1937345 Msa0663240:CDS
TCTTGGAACTTTGAAGCCAA+AGG 0.542220 4_4:-1933662 None:intergenic
TGTGCATTGGCCACTCCACT+CGG 0.542366 4_4:-1934120 None:intergenic
GGTTGCGGTGGTGTTGGCGA+TGG 0.542582 4_4:+1932182 Msa0663240:five_prime_UTR
TAGCTATCATTATGTTCTCT+CGG 0.543918 4_4:-1934399 None:intergenic
TGTTTGAAATGTGGGATGGA+TGG 0.544805 4_4:+1937478 Msa0663240:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 4_4:-1936692 None:intergenic
AATCTAGTCGAGAAAGAGAA+AGG 0.548022 4_4:+1932764 Msa0663240:five_prime_UTR
CGAGGACATCACGGATTTAG+CGG 0.548208 4_4:-1932610 None:intergenic
TTGTTGGGTTCTCATCATCT+CGG 0.549046 4_4:+1934460 Msa0663240:five_prime_UTR
TTGTTGGGTTCTCATCATCT+CGG 0.549046 4_4:+1938429 Msa0663240:CDS
CGAGCTTCAGATTGGAAGAG+CGG 0.549147 4_4:-1929204 None:intergenic
GGAAGCTATTCGAGAAGAAG+AGG 0.554823 4_4:+1929809 Msa0663240:intron
GTTAACAACTCTTTGTGCAT+AGG 0.556014 4_4:-1938104 None:intergenic
GAGAAAGATTCATGGGTTTG+TGG 0.557247 4_4:+1936491 Msa0663240:five_prime_UTR
GAGCTCATTAAAGCGACCAC+AGG 0.557353 4_4:+1934541 Msa0663240:five_prime_UTR
TGTTGGAGGATCCTTTGATG+TGG 0.558720 4_4:+1934857 Msa0663240:five_prime_UTR
CAGAGAAGAGAGCTAAAGAT+CGG 0.559209 4_4:-1929255 None:intergenic
CGACTACGTTGCAGAGAAGA+GGG 0.560726 4_4:-1929338 None:intergenic
CAATGCACAAAGAGTTAACT+CGG 0.560953 4_4:+1934134 Msa0663240:five_prime_UTR
AGATTCATGGGTTTGTGGAG+AGG 0.561266 4_4:+1936496 Msa0663240:five_prime_UTR
TATGGCAACCAATACAAAGA+AGG 0.561778 4_4:+1934961 Msa0663240:five_prime_UTR
CCAAGCATTCAATATCCGAT+TGG 0.562018 4_4:+1931612 Msa0663240:five_prime_UTR
TTGGCCACTCCACTCGGTAG+CGG 0.563486 4_4:-1934114 None:intergenic
TAGGCCACTCCACTCGGTAG+CGG 0.563486 4_4:-1938085 None:intergenic
GATACCATTTGAAGAGACTT+GGG 0.564437 4_4:+1936109 Msa0663240:five_prime_UTR
ATACGGGGACTGGCTTCTAC+GGG 0.565321 4_4:+1939021 Msa0663240:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 4_4:-1935875 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 4_4:+1937469 Msa0663240:CDS
CGGAGCTGAAGGTGGTGGAG+GGG 0.566193 4_4:+1932070 Msa0663240:intron
ACGACTACGTTGCAGAGAAG+AGG 0.566453 4_4:-1929339 None:intergenic
TCTAGAAACTATGGTGGTAC+CGG 0.567665 4_4:+1935856 Msa0663240:five_prime_UTR
GTTTGCTGAGCAAATGTGAC+AGG 0.567803 4_4:-1934240 None:intergenic
TACTAATATCCGTAGCAAGA+AGG 0.568540 4_4:-1936584 None:intergenic
ATGACGGATGGTGTTGAAGT+TGG 0.569733 4_4:+1931684 Msa0663240:five_prime_UTR
TGTGCATAGGCCACTCCACT+CGG 0.569929 4_4:-1938091 None:intergenic
ATGGTGGTGGCGAAAGGAGA+AGG 0.570011 4_4:+1932117 Msa0663240:five_prime_UTR
ACGGATGGTGTTGAAGTTGG+CGG 0.570486 4_4:+1931687 Msa0663240:five_prime_UTR
ACAGGCAAGAAGAGACAGCC+GGG 0.572058 4_4:+1936711 Msa0663240:five_prime_UTR
CTTTGATGTGGAGTCCCTTG+TGG 0.572959 4_4:+1934869 Msa0663240:five_prime_UTR
CACAAGGGACTCCACATCAA+AGG 0.573882 4_4:-1934868 None:intergenic
CCGTGATGTCCTCGTCGCAA+TGG 0.574492 4_4:+1932619 Msa0663240:five_prime_UTR
GGTGGCGATGGCGGTTGCGG+TGG 0.575133 4_4:+1932170 Msa0663240:five_prime_UTR
AGGATTAGAGTTCGATGCGA+TGG 0.575134 4_4:+1931654 Msa0663240:five_prime_UTR
TATAAAGACAATGGAAAGAG+AGG 0.575171 4_4:+1938165 Msa0663240:CDS
TAGAGGGTTTAAAGCCGTTG+TGG 0.575392 4_4:+1936053 Msa0663240:five_prime_UTR
ATGCGGAGTTTAGCACATAC+GGG 0.576002 4_4:+1939005 Msa0663240:CDS
GCAGAAGGGTTTCTGTAGGA+TGG 0.576930 4_4:-1933915 None:intergenic
GACTGCTCAAGCGTGTGGGA+AGG 0.578235 4_4:+1935176 Msa0663240:five_prime_UTR
CTCAGACTGCTCAAGCGTGT+GGG 0.579543 4_4:+1935172 Msa0663240:five_prime_UTR
CTAAGACTGTTCAGATTCAG+AGG 0.581573 4_4:+1929857 Msa0663240:five_prime_UTR
TAGAGTGGTTATAAAGACAA+TGG 0.582498 4_4:+1938156 Msa0663240:CDS
TATTGTTCTTATAGAAGGTG+AGG 0.583167 4_4:+1931374 Msa0663240:five_prime_UTR
CAAACCTGGTCAATGGCAGA+AGG 0.584600 4_4:-1933930 None:intergenic
AAGGTGGTGGAGGGGAAAGG+AGG 0.586200 4_4:+1932078 Msa0663240:intron
CGAATGGTGAATGTAGTGAA+AGG 0.586436 4_4:+1937389 Msa0663240:CDS
ATAACTGAAACTAAATCGAT+CGG 0.586558 4_4:-1932660 None:intergenic
ATTCAAATGCAAGAAATGGA+CGG 0.588460 4_4:+1936928 Msa0663240:CDS
TTGGGTCTGCCGGAACGTGT+CGG 0.588603 4_4:-1939097 None:intergenic
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 4_4:-1934100 None:intergenic
TGGGTCTGTGTCGAAGACAC+TGG 0.590108 4_4:+1935778 Msa0663240:five_prime_UTR
CCACTGAGAACTAGTATGGT+GGG 0.590558 4_4:+1936663 Msa0663240:five_prime_UTR
CAATGGAGAAAGAGTCTGAA+AGG 0.590894 4_4:-1929143 None:intergenic
GCTCAGACTGCTCAAGCGTG+TGG 0.592158 4_4:+1935171 Msa0663240:five_prime_UTR
AGCAAGCATCAAACTTGTGA+GGG 0.592861 4_4:-1936897 None:intergenic
TCGAACGATCCTTCTTGCTA+CGG 0.594943 4_4:+1936575 Msa0663240:five_prime_UTR
AATCGATCGGAGAGTTCTAC+CGG 0.594959 4_4:-1932647 None:intergenic
GTTTGAGAAGCAGCATAGAG+TGG 0.595646 4_4:+1934167 Msa0663240:five_prime_UTR
ATGCGATGGCGAAAGGATGA+CGG 0.597203 4_4:+1931668 Msa0663240:five_prime_UTR
GAACACAGTTGAAACCAGAT+TGG 0.599444 4_4:-1932810 None:intergenic
GTAGCAAGAAGGATCGTTCG+AGG 0.601030 4_4:-1936573 None:intergenic
TGTTGTGGGGTATGACGACT+TGG 0.601269 4_4:+1939047 Msa0663240:three_prime_UTR
ACACTATGGCATGATAGAGT+TGG 0.601658 4_4:+1931244 Msa0663240:five_prime_UTR
GCTGTCTAGAAATTTGGATG+TGG 0.601699 4_4:+1929954 Msa0663240:five_prime_UTR
GTCGAATTCGGGAGATGGAG+AGG 0.601823 4_4:+1937350 Msa0663240:CDS
CTTGAGACTTATCGAAATGG+AGG 0.602255 4_4:+1935565 Msa0663240:five_prime_UTR
GTTTGAGAAGCAGCATAGAG+TGG 0.605018 4_4:+1938141 Msa0663240:CDS
TCAGCAGCTTCATATCCACT+TGG 0.605836 4_4:-1935634 None:intergenic
ATCTTGATGGATGTAGGGAA+AGG 0.606230 4_4:+1930965 Msa0663240:five_prime_UTR
CTCTATCATGCCATAGTGTG+TGG 0.606806 4_4:-1931240 None:intergenic
AGGTACTTCCAATCTGCGGC+CGG 0.607017 4_4:-1935942 None:intergenic
GCCACTGAGAACTAGTATGG+TGG 0.607785 4_4:+1936662 Msa0663240:five_prime_UTR
GTCTTGACTCTTGAGAGCTA+AGG 0.608110 4_4:+1939486 Msa0663240:three_prime_UTR
GATTTAGCGGAGGCTTTGTG+CGG 0.608415 4_4:-1932597 None:intergenic
ATTTGACCAGATTCGACAAG+TGG 0.608851 4_4:+1929833 Msa0663240:five_prime_UTR
TTAAACCCTCTAAAACTGGA+TGG 0.609462 4_4:-1936042 None:intergenic
CCGGGAAAAGAGATGCCTGA+TGG 0.609734 4_4:+1936729 Msa0663240:five_prime_UTR
ACCACCATCTACAACTCCAT+CGG 0.611181 4_4:-1932102 None:intergenic
ATGTCAATGGAAGTGACTGC+AGG 0.612140 4_4:+1936802 Msa0663240:CDS
AAGCAAGCATCAAACTTGTG+AGG 0.613257 4_4:-1936898 None:intergenic
CAGTCTGAGCATAGCCACGT+TGG 0.613747 4_4:-1935158 None:intergenic
AGGGCAATGGATGAAGTTGG+TGG 0.613865 4_4:+1932152 Msa0663240:five_prime_UTR
TTTATAGAGGGAATCACGCG+TGG 0.614222 4_4:-1931446 None:intergenic
TAGAGTTGGTGTGTGAATGT+AGG 0.614643 4_4:+1931258 Msa0663240:five_prime_UTR
ATATAGACTGATACACGGAT+AGG 0.615163 4_4:-1930010 None:intergenic
GATGGAGTTGTAGATGGTGG+TGG 0.615734 4_4:+1932104 Msa0663240:five_prime_UTR
ATGGCAATTGATGCTCGTTG+AGG 0.615967 4_4:+1929230 Msa0663240:five_prime_UTR
TGATGTCCTCGTCGCAATGG+CGG 0.616829 4_4:+1932622 Msa0663240:five_prime_UTR
CACTGTATCACTAAAACATG+CGG 0.616849 4_4:-1936631 None:intergenic
ACATACTGAGAGCTCCTACT+GGG 0.618378 4_4:+1938379 Msa0663240:CDS
TCTATTGATATGATGTCTTG+AGG 0.618511 4_4:+1934279 Msa0663240:five_prime_UTR
CATGGTTTGATCAGTCTGCA+AGG 0.618845 4_4:-1930894 None:intergenic
AGCTCATTAAAGCGACCACA+GGG 0.619676 4_4:+1934542 Msa0663240:five_prime_UTR
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 4_4:+1934105 Msa0663240:five_prime_UTR
GATGGTGTTGAAGTTGGCGG+TGG 0.623232 4_4:+1931690 Msa0663240:five_prime_UTR
TGGTTGCCATACATGATTAG+GGG 0.623830 4_4:-1934949 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 4_4:+1937474 Msa0663240:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 4_4:+1938108 Msa0663240:CDS
ATGTGGATACTAAAGTGAGA+AGG 0.624715 4_4:+1933804 Msa0663240:five_prime_UTR
GAAGCTATTCGAGAAGAAGA+GGG 0.626506 4_4:+1929810 Msa0663240:intron
CTTCTACGGGTAATGTTGTG+GGG 0.627337 4_4:+1939034 Msa0663240:exon
AATGGCAGAAGGGTTTCTGT+AGG 0.630365 4_4:-1933919 None:intergenic
TTCGAAAGGCCGCTACCGAG+TGG 0.630559 4_4:+1938076 Msa0663240:CDS
ACTCTTCATCAGCAATTAGG+TGG 0.632287 4_4:-1935692 None:intergenic
AATATCCGATTGGAAAACCC+AGG 0.633825 4_4:+1931622 Msa0663240:five_prime_UTR
GGTTAGGGATGAGTATGCAC+CGG 0.635635 4_4:+1938195 Msa0663240:CDS
GATGAAGTTGGTGGCGATGG+CGG 0.635723 4_4:+1932161 Msa0663240:five_prime_UTR
AAACCTGGTCAATGGCAGAA+GGG 0.635904 4_4:-1933929 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 4_4:+1934091 Msa0663240:five_prime_UTR
TAATGTAAAAGGTAAGGTGA+CGG 0.636801 4_4:+1932552 Msa0663240:five_prime_UTR
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 4_4:+1938081 Msa0663240:CDS
AAGGCCGCTACCGAGTGGAG+TGG 0.638011 4_4:+1934110 Msa0663240:five_prime_UTR
AATTCGGGAGATGGAGAGGA+CGG 0.638289 4_4:+1937354 Msa0663240:CDS
GCTTGGATATCTATTAGGCA+TGG 0.639413 4_4:-1931595 None:intergenic
TGTAATCTCAAAACGCCAAG+TGG 0.639908 4_4:+1935619 Msa0663240:five_prime_UTR
GGAACTTTGAAGCCAAAGGG+TGG 0.640019 4_4:-1933658 None:intergenic
GAGTTAACTCGGAAAGAAAG+CGG 0.640585 4_4:+1934145 Msa0663240:five_prime_UTR
TTGTTAACTCGGAAAGAGAG+CGG 0.640754 4_4:+1938119 Msa0663240:CDS
AACAACCTAAAAGGGCTAGT+CGG 0.642277 4_4:-1938411 None:intergenic
GGGTTCTCATCATCTCGGTG+TGG 0.642737 4_4:+1934465 Msa0663240:five_prime_UTR
GGGTTCTCATCATCTCGGTG+TGG 0.642737 4_4:+1938434 Msa0663240:CDS
AAAATGGTGCTTCCAGCACA+GGG 0.643044 4_4:+1936184 Msa0663240:five_prime_UTR
GACCGCCCATTAGTTCAGCT+AGG 0.643366 4_4:-1935903 None:intergenic
CGTAAATATTCCAAAATCCG+CGG 0.647005 4_4:-1935974 None:intergenic
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 4_4:-1938018 None:intergenic
GAAGTTGTGCATACATCTGG+CGG 0.651844 4_4:+1935595 Msa0663240:five_prime_UTR
AGTCAATAACACAATTAACA+TGG 0.652172 4_4:-1930912 None:intergenic
CCATTGCGACGAGGACATCA+CGG 0.652805 4_4:-1932619 None:intergenic
TGCGGCAACTGGAAACAGAA+CGG 0.653414 4_4:+1936534 Msa0663240:five_prime_UTR
ACGGCGAATGAGGAGACGAA+TGG 0.653590 4_4:+1937373 Msa0663240:CDS
GCGAGATATTAGAAAAGCTG+AGG 0.654014 4_4:+1932225 Msa0663240:five_prime_UTR
ATAATGCAGTTCAATAAGCG+AGG 0.657195 4_4:+1935484 Msa0663240:intron
ACATCATATCAATAGACTCA+AGG 0.658508 4_4:-1934272 None:intergenic
GTCGGAACAAACTTCCCAGT+AGG 0.660421 4_4:-1938393 None:intergenic
AGGACGGGATCTTCAGTGTG+CGG 0.664290 4_4:+1936516 Msa0663240:five_prime_UTR
CGGCTAGGACCACTTTCGAA+AGG 0.665380 4_4:+1938062 Msa0663240:CDS
CCGGAACCGCCATTGCGACG+AGG 0.668033 4_4:-1932628 None:intergenic
GTTGGCGATGGAGATGTACA+TGG 0.668187 4_4:+1932194 Msa0663240:five_prime_UTR
GATGTGAAGTGTGCAGACAG+CGG 0.669637 4_4:+1936847 Msa0663240:CDS
ACAGAACCCAATGAGTAAGA+GGG 0.670609 4_4:-1932886 None:intergenic
TCAGTTTGAAGCCTTCTGTG+CGG 0.678971 4_4:+1936759 Msa0663240:five_prime_UTR
GGACATCACGGATTTAGCGG+AGG 0.683899 4_4:-1932607 None:intergenic
TCGACTTCTAGAAACTATGG+TGG 0.684605 4_4:+1935850 Msa0663240:five_prime_UTR
CAAAGTTCCAAGAACAAACG+GGG 0.685277 4_4:+1933672 Msa0663240:five_prime_UTR
TTATAGAGGGAATCACGCGT+GGG 0.688730 4_4:-1931445 None:intergenic
TACGAAGAATCCAATAACTG+AGG 0.689869 4_4:+1935993 Msa0663240:five_prime_UTR
ACCGATGGAGTTGTAGATGG+TGG 0.690749 4_4:+1932101 Msa0663240:five_prime_UTR
GGATGGCTAGAGCATGAACA+TGG 0.693348 4_4:-1933898 None:intergenic
TGTCAGGGAAACATTGCTGA+AGG 0.696155 4_4:+1938951 Msa0663240:intron
TGCCTAGCTGAACTAATGGG+CGG 0.697388 4_4:+1935901 Msa0663240:five_prime_UTR
AGGTTTCCCATCAACCACAA+CGG 0.697501 4_4:-1936067 None:intergenic
ACAAATGCAATCATTCAACA+AGG 0.705448 4_4:-1931017 None:intergenic
GAAAAGGTACTTCCAATCTG+CGG 0.711886 4_4:-1935946 None:intergenic
AAACCATATAGACTGATACA+CGG 0.717551 4_4:-1930015 None:intergenic
TGCGGAGTTTAGCACATACG+GGG 0.722432 4_4:+1939006 Msa0663240:CDS
GAATTGAACTCAACCCAACG+TGG 0.724034 4_4:+1935144 Msa0663240:five_prime_UTR
CCCACCATACTAGTTCTCAG+TGG 0.729319 4_4:-1936663 None:intergenic
GATGGCGAAAGGATGACGGA+TGG 0.756508 4_4:+1931672 Msa0663240:five_prime_UTR
GGCGATGGAGATGTACATGG+TGG 0.786952 4_4:+1932197 Msa0663240:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTTTTTTTTTT+TGG + chr4_4:1936973-1936992 Msa0663240:intron 0.0%
!!! TGATTAATTAACTTTTTAAT+TGG + chr4_4:1934825-1934844 Msa0663240:intron 10.0%
!! ATTAAATGAGTTAAAATATT+TGG + chr4_4:1936431-1936450 Msa0663240:intron 10.0%
!! TGATTTATAAAAAACAATAT+GGG - chr4_4:1937296-1937315 None:intergenic 10.0%
!! ATGATTTATAAAAAACAATA+TGG - chr4_4:1937297-1937316 None:intergenic 10.0%
!! GTCAAAATAAATAAATTTAT+CGG + chr4_4:1939133-1939152 Msa0663240:three_prime_UTR 10.0%
!! TCAAAATAAATAAATTTATC+GGG + chr4_4:1939134-1939153 Msa0663240:three_prime_UTR 10.0%
!!! ACACAAAGTTTTTTATATAT+AGG - chr4_4:1933506-1933525 None:intergenic 15.0%
!!! TTAATTAACTTTTTAATTGG+AGG + chr4_4:1934828-1934847 Msa0663240:intron 15.0%
!!! TTTTTAGTGAATTAAAGTTA+AGG + chr4_4:1936248-1936267 Msa0663240:intron 15.0%
!! ATCACTATCATTTATTAAAA+TGG - chr4_4:1938878-1938897 None:intergenic 15.0%
!! AAAAACTTCAGTTATTTATT+TGG - chr4_4:1939292-1939311 None:intergenic 15.0%
!! AATTGAATATAGAATCCTTA+GGG - chr4_4:1929428-1929447 None:intergenic 20.0%
!! ACTTATTTGAACTTATTTAG+TGG + chr4_4:1929593-1929612 Msa0663240:intron 20.0%
!!! AAGTTTTTACACAATTAACA+TGG - chr4_4:1930215-1930234 None:intergenic 20.0%
!! AAAAATTCAGAGAATTTCAA+TGG - chr4_4:1930714-1930733 None:intergenic 20.0%
!!! AAGTTTTAACACAATTAACA+TGG - chr4_4:1930873-1930892 None:intergenic 20.0%
!!! CAAAAGTACAAACTTAATAA+TGG - chr4_4:1931074-1931093 None:intergenic 20.0%
!!! CATTATTAAGTTTGTACTTT+TGG + chr4_4:1931072-1931091 Msa0663240:five_prime_UTR 20.0%
!! AGCAAACGAAAAAAATTTAA+TGG + chr4_4:1931216-1931235 Msa0663240:five_prime_UTR 20.0%
!! AAGAATATTGTTCTTATAGA+AGG + chr4_4:1931369-1931388 Msa0663240:five_prime_UTR 20.0%
!! GCTACAAATTCAATTAATAA+AGG - chr4_4:1931423-1931442 None:intergenic 20.0%
!! AGAAAATAGAAGTTTATAGA+GGG - chr4_4:1931461-1931480 None:intergenic 20.0%
!! TAGAAAATAGAAGTTTATAG+AGG - chr4_4:1931462-1931481 None:intergenic 20.0%
!! TCATTAAAATGCACAAATAT+TGG + chr4_4:1933055-1933074 Msa0663240:intron 20.0%
!! CAATAAAAAAAGGAAAGAAA+GGG - chr4_4:1933186-1933205 None:intergenic 20.0%
!! ACAATAAAAAAAGGAAAGAA+AGG - chr4_4:1933187-1933206 None:intergenic 20.0%
!! GAAAATTCGACAATAAAAAA+AGG - chr4_4:1933196-1933215 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG + chr4_4:1933212-1933231 Msa0663240:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG + chr4_4:1933527-1933546 Msa0663240:intron 20.0%
!! TCTGATTAAGATTAATGTTA+TGG + chr4_4:1935263-1935282 Msa0663240:five_prime_UTR 20.0%
!! CTGATTAAGATTAATGTTAT+GGG + chr4_4:1935264-1935283 Msa0663240:five_prime_UTR 20.0%
!! TTAGTAATGCAAATAACTTA+GGG - chr4_4:1935362-1935381 None:intergenic 20.0%
!! ATTAGTAATGCAAATAACTT+AGG - chr4_4:1935363-1935382 None:intergenic 20.0%
!! CAATGTCATTAATTACAAAA+AGG - chr4_4:1936225-1936244 None:intergenic 20.0%
!! TCTCAACAAAAATAATATCA+GGG - chr4_4:1936475-1936494 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG - chr4_4:1936476-1936495 None:intergenic 20.0%
!!! AGTTTTTTCTAAATCATCAA+AGG - chr4_4:1937025-1937044 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG + chr4_4:1933212-1933231 Msa0663240:intron 20.0%
!!! ATAAAAGTATCTGAGATTTT+AGG + chr4_4:1937804-1937823 Msa0663240:intron 20.0%
!!! ACTGTTAATTGAGTATTTTT+TGG + chr4_4:1937883-1937902 Msa0663240:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG + chr4_4:1933527-1933546 Msa0663240:intron 20.0%
!! TGTGTTTAGTATAAAAATCT+TGG + chr4_4:1938619-1938638 Msa0663240:intron 20.0%
!! GTGTTTAGTATAAAAATCTT+GGG + chr4_4:1938620-1938639 Msa0663240:intron 20.0%
!!! AACTGAAGTTTTTTAAGTAA+CGG + chr4_4:1939299-1939318 Msa0663240:three_prime_UTR 20.0%
!! TTTCACATTACTATTACTAT+TGG + chr4_4:1939448-1939467 Msa0663240:three_prime_UTR 20.0%
!! TTCACATTACTATTACTATT+GGG + chr4_4:1939449-1939468 Msa0663240:three_prime_UTR 20.0%
! CAATTGAATATAGAATCCTT+AGG - chr4_4:1929429-1929448 None:intergenic 25.0%
! CATGATACAAAAACAGAATT+TGG - chr4_4:1929484-1929503 None:intergenic 25.0%
! ATCAAATCTAATGTCCTTAT+TGG + chr4_4:1929771-1929790 Msa0663240:intron 25.0%
! TTAACATGGTTTAATCATTG+AGG - chr4_4:1930201-1930220 None:intergenic 25.0%
! TATTTAGCAATTGATCTGTA+TGG - chr4_4:1930257-1930276 None:intergenic 25.0%
! TACAGATCAATTGCTAAATA+TGG + chr4_4:1930257-1930276 Msa0663240:intron 25.0%
!! ATACTTCTAAAGAAAACACT+TGG - chr4_4:1930300-1930319 None:intergenic 25.0%
! AAAAACTACCAAAGGAAATA+AGG - chr4_4:1930363-1930382 None:intergenic 25.0%
!!! TATTTCCTTTGGTAGTTTTT+TGG + chr4_4:1930363-1930382 Msa0663240:intron 25.0%
! TTAAACCAAAAAACTACCAA+AGG - chr4_4:1930371-1930390 None:intergenic 25.0%
! AAATTTGTACTACTTTGCTT+TGG + chr4_4:1930563-1930582 Msa0663240:intron 25.0%
! ATTATCACTAAGTGAATCAT+TGG - chr4_4:1930590-1930609 None:intergenic 25.0%
! TCAATTTCCTGATTTAATTG+AGG - chr4_4:1930685-1930704 None:intergenic 25.0%
! ATAAAAGGAAATTGAGTTTG+TGG - chr4_4:1930756-1930775 None:intergenic 25.0%
! ATGTTGAAATGCTAGATAAA+AGG - chr4_4:1930771-1930790 None:intergenic 25.0%
! TTAACATGGTTTAATCATTG+AGG - chr4_4:1930201-1930220 None:intergenic 25.0%
! AGTCAATAACACAATTAACA+TGG - chr4_4:1930915-1930934 None:intergenic 25.0%
!!! TGTGTTATTGACTATGTTTT+TGG + chr4_4:1930922-1930941 Msa0663240:five_prime_UTR 25.0%
!!! TAGTTGTTTTTGTGAATCAA+AGG + chr4_4:1931308-1931327 Msa0663240:five_prime_UTR 25.0%
! TGAAAATACAATTAGTGTGA+TGG - chr4_4:1932405-1932424 None:intergenic 25.0%
! ATAACTGAAACTAAATCGAT+CGG - chr4_4:1932663-1932682 None:intergenic 25.0%
! GTAACAAAGCACATATAAAA+AGG + chr4_4:1932726-1932745 Msa0663240:five_prime_UTR 25.0%
!!! GTGTTTTTTAAGTCAATGTT+TGG + chr4_4:1932923-1932942 Msa0663240:five_prime_UTR 25.0%
! AGAGAGAGAATTAAAAAGAA+GGG - chr4_4:1933161-1933180 None:intergenic 25.0%
! AAGAGAGAGAATTAAAAAGA+AGG - chr4_4:1933162-1933181 None:intergenic 25.0%
!!! GATACTTTACTTTTATCTGA+TGG - chr4_4:1933438-1933457 None:intergenic 25.0%
!!! AGTAAAGTATCTGAGATTTT+AGG + chr4_4:1933447-1933466 Msa0663240:intron 25.0%
!!! GCTGTTAATTGAGTATTTTT+TGG + chr4_4:1933526-1933545 Msa0663240:intron 25.0%
! TATGTTTCATGAGTAATTAG+AGG + chr4_4:1934617-1934636 Msa0663240:intron 25.0%
! GTGTTTGGTATAAAAATCTT+AGG + chr4_4:1934649-1934668 Msa0663240:intron 25.0%
! CAAATTGTAACAAATCTAGT+TGG + chr4_4:1935296-1935315 Msa0663240:five_prime_UTR 25.0%
! TACTAATATGCATGTTATGT+TGG + chr4_4:1935376-1935395 Msa0663240:intron 25.0%
! TTGTTCATAAAAATCATTCG+AGG - chr4_4:1935748-1935767 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG + chr4_4:1935923-1935942 Msa0663240:five_prime_UTR 25.0%
! TGAGTTAAAATATTTGGTTG+TGG + chr4_4:1936437-1936456 Msa0663240:intron 25.0%
!! TTTTTGTTGAGAAAGATTCA+TGG + chr4_4:1936483-1936502 Msa0663240:five_prime_UTR 25.0%
!! TTTTGTTGAGAAAGATTCAT+GGG + chr4_4:1936484-1936503 Msa0663240:five_prime_UTR 25.0%
! TATCATTGAATTTATCAGCA+AGG - chr4_4:1937081-1937100 None:intergenic 25.0%
! ACAAACATAACATGTATAGA+GGG - chr4_4:1937247-1937266 None:intergenic 25.0%
! AACAAACATAACATGTATAG+AGG - chr4_4:1937248-1937267 None:intergenic 25.0%
!! CATGTACTTACATTATTTTC+AGG + chr4_4:1937314-1937333 Msa0663240:intron 25.0%
! TAAATTCCGTTTACCTATAT+TGG + chr4_4:1937417-1937436 Msa0663240:CDS 25.0%
!!! TTGTTTTGTATGAGCATATA+TGG + chr4_4:1937557-1937576 Msa0663240:intron 25.0%
!! TGTATTAGTTAGTATTGAAC+TGG + chr4_4:1937589-1937608 Msa0663240:intron 25.0%
! AATAAAGAGAAAAGTGACAA+AGG - chr4_4:1937642-1937661 None:intergenic 25.0%
!!! GCACGAACTTTTTTATATAT+AGG - chr4_4:1937863-1937882 None:intergenic 25.0%
!! AGAAACTTTTGCAGAATATA+CGG + chr4_4:1938042-1938061 Msa0663240:CDS 25.0%
! TGTTTCATATGAGTAATTAG+AGG + chr4_4:1938588-1938607 Msa0663240:intron 25.0%
!!! TGATGTTTCTTTTTTATGTC+TGG + chr4_4:1938772-1938791 Msa0663240:intron 25.0%
!! CTGAATGTTGACATTTTTAT+TGG + chr4_4:1938928-1938947 Msa0663240:intron 25.0%
!! TTTTCTCAGACAATTATCAA+AGG - chr4_4:1939359-1939378 None:intergenic 25.0%
TGAAATTTGCGAAGTGAAAA+CGG - chr4_4:1929289-1929308 None:intergenic 30.0%
TTTCACTTCGCAAATTTCAT+TGG + chr4_4:1929290-1929309 Msa0663240:five_prime_UTR 30.0%
!! TATCTGATATTTGCTATCTC+AGG + chr4_4:1929547-1929566 Msa0663240:intron 30.0%
TAAACTGAAACAATCCAAAC+AGG - chr4_4:1929574-1929593 None:intergenic 30.0%
!! TAGTGGAATAAGTTTTGTAG+TGG + chr4_4:1929610-1929629 Msa0663240:intron 30.0%
! TGACTTATTTGACTTATCTC+AGG + chr4_4:1929639-1929658 Msa0663240:intron 30.0%
! GACTTATTTGACTTATCTCA+GGG + chr4_4:1929640-1929659 Msa0663240:intron 30.0%
AACACCAATCAAAACAAAAC+AGG - chr4_4:1929666-1929685 None:intergenic 30.0%
TTTGTGCTCACTACTAAAAT+GGG - chr4_4:1929715-1929734 None:intergenic 30.0%
! TTTTGTGCTCACTACTAAAA+TGG - chr4_4:1929716-1929735 None:intergenic 30.0%
!! AATGTCCTTATTGGTTGTTT+TGG + chr4_4:1929780-1929799 Msa0663240:intron 30.0%
TTCATCCAAAACAACCAATA+AGG - chr4_4:1929788-1929807 None:intergenic 30.0%
!!! TATTGGTTGTTTTGGATGAA+TGG + chr4_4:1929788-1929807 Msa0663240:intron 30.0%
AAACCATATAGACTGATACA+CGG - chr4_4:1930018-1930037 None:intergenic 30.0%
! TATCAGTCTATATGGTTTGT+AGG + chr4_4:1930020-1930039 Msa0663240:five_prime_UTR 30.0%
TTTCAACATTTAGCATGTAC+TGG + chr4_4:1930124-1930143 Msa0663240:five_prime_UTR 30.0%
! ATACCATACCTTATTTCCTT+TGG + chr4_4:1930352-1930371 Msa0663240:intron 30.0%
TGCAACTTTATCAGCTTAAA+AGG - chr4_4:1930447-1930466 None:intergenic 30.0%
! TTTTAAGCTGATAAAGTTGC+AGG + chr4_4:1930446-1930465 Msa0663240:intron 30.0%
TGATTTAATTGAGGCAATGT+TGG - chr4_4:1930676-1930695 None:intergenic 30.0%
AACATTGCCTCAATTAAATC+AGG + chr4_4:1930675-1930694 Msa0663240:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG + chr4_4:1930124-1930143 Msa0663240:five_prime_UTR 30.0%
ACAAATGCAATCATTCAACA+AGG - chr4_4:1931020-1931039 None:intergenic 30.0%
! TTCTAAGTGTGACACATTTT+TGG - chr4_4:1931172-1931191 None:intergenic 30.0%
TATTGTTCTTATAGAAGGTG+AGG + chr4_4:1931374-1931393 Msa0663240:five_prime_UTR 30.0%
!! AACTTGTTGATGCTTCAATA+TGG - chr4_4:1931543-1931562 None:intergenic 30.0%
TGAATGCTTGGATATCTATT+AGG - chr4_4:1931603-1931622 None:intergenic 30.0%
GAGAAAGTCCAAAAGAATTA+GGG + chr4_4:1931959-1931978 Msa0663240:intron 30.0%
GAGAAGGTCAAAAAGAATTA+GGG + chr4_4:1932133-1932152 Msa0663240:five_prime_UTR 30.0%
TCTATTATGCATTTGACACA+CGG + chr4_4:1932296-1932315 Msa0663240:intron 30.0%
TCGTTTGTCAGAAAAAAATG+TGG + chr4_4:1932427-1932446 Msa0663240:intron 30.0%
CAGAAGTAATGTAAAAGGTA+AGG + chr4_4:1932546-1932565 Msa0663240:five_prime_UTR 30.0%
TAATGTAAAAGGTAAGGTGA+CGG + chr4_4:1932552-1932571 Msa0663240:five_prime_UTR 30.0%
GAAACAATGTTTACCTGTAT+AGG - chr4_4:1932858-1932877 None:intergenic 30.0%
! TTTTGTCTTTAAGCAAAGAC+TGG + chr4_4:1932989-1933008 Msa0663240:intron 30.0%
TATGAAGAGTTCAGAGAAAT+AGG + chr4_4:1933561-1933580 Msa0663240:intron 30.0%
TTCAAAGTTCCAAGAACAAA+CGG + chr4_4:1933670-1933689 Msa0663240:five_prime_UTR 30.0%
TTATTGCATCTACAGCAAAA+TGG + chr4_4:1933781-1933800 Msa0663240:five_prime_UTR 30.0%
!!! ATGTTTTGATCATTCTGTGT+TGG + chr4_4:1933960-1933979 Msa0663240:intron 30.0%
CATACATAAAGTTTCCTGAA+GGG - chr4_4:1934046-1934065 None:intergenic 30.0%
!!! TAGAGTGGTTTTAAAGACAA+TGG + chr4_4:1934182-1934201 Msa0663240:five_prime_UTR 30.0%
TTTAAAGACAATGGAAAGAG+AGG + chr4_4:1934191-1934210 Msa0663240:five_prime_UTR 30.0%
ACATCATATCAATAGACTCA+AGG - chr4_4:1934275-1934294 None:intergenic 30.0%
TCTATTGATATGATGTCTTG+AGG + chr4_4:1934279-1934298 Msa0663240:five_prime_UTR 30.0%
CTATTGATATGATGTCTTGA+GGG + chr4_4:1934280-1934299 Msa0663240:five_prime_UTR 30.0%
ATTAAAAACAAGCAGTGGAA+TGG - chr4_4:1934326-1934345 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG + chr4_4:1934372-1934391 Msa0663240:intron 30.0%
TAGCTATCATTATGTTCTCT+CGG - chr4_4:1934402-1934421 None:intergenic 30.0%
TAATGAGCTCTTATGTTGTT+GGG - chr4_4:1934531-1934550 None:intergenic 30.0%
TTAATGAGCTCTTATGTTGT+TGG - chr4_4:1934532-1934551 None:intergenic 30.0%
TGTGTCAATAACACTAATAG+TGG - chr4_4:1934718-1934737 None:intergenic 30.0%
!! AGTAAACTGTTTCTGTTACA+AGG + chr4_4:1934757-1934776 Msa0663240:intron 30.0%
TTAATTGGAGGTAGTTATGT+TGG + chr4_4:1934840-1934859 Msa0663240:intron 30.0%
! ACCAAGTAAATTTTCCACAA+GGG - chr4_4:1934886-1934905 None:intergenic 30.0%
AAACATCACCTTCTTTGTAT+TGG - chr4_4:1934972-1934991 None:intergenic 30.0%
CCAAAAACAAGTTACATTCA+TGG - chr4_4:1935002-1935021 None:intergenic 30.0%
!!! CCATGAATGTAACTTGTTTT+TGG + chr4_4:1934999-1935018 Msa0663240:intron 30.0%
AAAACTCTTCATCAGCAATT+AGG - chr4_4:1935698-1935717 None:intergenic 30.0%
TGGCATGAAAATTCTATCTT+GGG - chr4_4:1935824-1935843 None:intergenic 30.0%
TTAAAATATTTGGTTGTGGC+AGG + chr4_4:1936441-1936460 Msa0663240:intron 30.0%
CAACAAAAATAATATCAGGG+TGG - chr4_4:1936472-1936491 None:intergenic 30.0%
!! ATTTTAGTGGTTGATGTCAA+TGG + chr4_4:1936789-1936808 Msa0663240:exon 30.0%
GGATATTCAAATGCAAGAAA+TGG + chr4_4:1936924-1936943 Msa0663240:CDS 30.0%
ATTCAAATGCAAGAAATGGA+CGG + chr4_4:1936928-1936947 Msa0663240:CDS 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG + chr4_4:1937469-1937488 Msa0663240:CDS 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG + chr4_4:1937470-1937489 Msa0663240:CDS 30.0%
! TTATGTCTCAAAACCTTTTG+AGG + chr4_4:1937501-1937520 Msa0663240:CDS 30.0%
! ATTAGTTAGTATTGAACTGG+TGG + chr4_4:1937592-1937611 Msa0663240:intron 30.0%
!!! TAGTCTAAGATGTTTTGGTT+TGG + chr4_4:1937703-1937722 Msa0663240:intron 30.0%
TGAACTCTTCTTCATATCTA+TGG - chr4_4:1937914-1937933 None:intergenic 30.0%
GAAAGAGATTTAGTGTTAGT+TGG + chr4_4:1937950-1937969 Msa0663240:intron 30.0%
TAGAGTGGTTATAAAGACAA+TGG + chr4_4:1938156-1938175 Msa0663240:CDS 30.0%
TATAAAGACAATGGAAAGAG+AGG + chr4_4:1938165-1938184 Msa0663240:CDS 30.0%
AATAAAAACAAGCAGAGGAA+TGG - chr4_4:1938299-1938318 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG + chr4_4:1934372-1934391 Msa0663240:intron 30.0%
AGCTGAAACATAGTGAAATA+AGG - chr4_4:1938542-1938561 None:intergenic 30.0%
TATGAGTAATTAGAGGATGA+AGG + chr4_4:1938595-1938614 Msa0663240:intron 30.0%
!! TTGACATTTTTATTGGTGTC+AGG + chr4_4:1938935-1938954 Msa0663240:intron 30.0%
!!! TGACATTTTTATTGGTGTCA+GGG + chr4_4:1938936-1938955 Msa0663240:intron 30.0%
!! ACTTTTAACCGACTTTTTGA+TGG + chr4_4:1938977-1938996 Msa0663240:CDS 30.0%
!!! TTATTTTGACTCCAACTTTC+AGG - chr4_4:1939123-1939142 None:intergenic 30.0%
! AATAAATTTATCGGGCCTTT+TGG + chr4_4:1939142-1939161 Msa0663240:three_prime_UTR 30.0%
!!! AGACTCGTTATTTTTCAACT+TGG + chr4_4:1939244-1939263 Msa0663240:three_prime_UTR 30.0%
!!! GACTCGTTATTTTTCAACTT+GGG + chr4_4:1939245-1939264 Msa0663240:three_prime_UTR 30.0%
AGTCTGAAAGGAGATTAAAC+AGG - chr4_4:1929134-1929153 None:intergenic 35.0%
TTGTGTCTGAAAAATCGCAA+TGG - chr4_4:1929163-1929182 None:intergenic 35.0%
TGCTTCGAAAACTCTTGATT+AGG + chr4_4:1929387-1929406 Msa0663240:intron 35.0%
GCTTCGAAAACTCTTGATTA+GGG + chr4_4:1929388-1929407 Msa0663240:intron 35.0%
GTTTATACTCTCAAACCCTA+AGG + chr4_4:1929410-1929429 Msa0663240:intron 35.0%
ATATAGACTGATACACGGAT+AGG - chr4_4:1930013-1930032 None:intergenic 35.0%
TATCCGTGTATCAGTCTATA+TGG + chr4_4:1930012-1930031 Msa0663240:five_prime_UTR 35.0%
TATGGTTTAATCAGTCTGCA+GGG - chr4_4:1930239-1930258 None:intergenic 35.0%
CTACCAAAGGAAATAAGGTA+TGG - chr4_4:1930358-1930377 None:intergenic 35.0%
GAAGCATGACATTATTGACA+TGG - chr4_4:1930621-1930640 None:intergenic 35.0%
! GTTTTCATGAGCTATCTTGA+TGG + chr4_4:1930952-1930971 Msa0663240:five_prime_UTR 35.0%
! ATTTAATGGACCACACACTA+TGG + chr4_4:1931230-1931249 Msa0663240:five_prime_UTR 35.0%
CTAATCCTATTTGATCTCCT+GGG - chr4_4:1931642-1931661 None:intergenic 35.0%
TCTAATCCTATTTGATCTCC+TGG - chr4_4:1931643-1931662 None:intergenic 35.0%
GAGAAGGTCCAAAAGAATTA+GGG + chr4_4:1931779-1931798 Msa0663240:intron 35.0%
! AACAATGGCCCTAATTCTTT+TGG - chr4_4:1931790-1931809 None:intergenic 35.0%
GGAGAAAGTCCAAAAGAATT+AGG + chr4_4:1931958-1931977 Msa0663240:intron 35.0%
GGAGAAGGTCAAAAAGAATT+AGG + chr4_4:1932132-1932151 Msa0663240:five_prime_UTR 35.0%
GTCAAAAAGAATTAGGGCAA+TGG + chr4_4:1932139-1932158 Msa0663240:five_prime_UTR 35.0%
AAAAATGTGGAGAAACAAGC+TGG + chr4_4:1932440-1932459 Msa0663240:five_prime_UTR 35.0%
AGCTGGAGATATCAAGAAAT+TGG + chr4_4:1932457-1932476 Msa0663240:five_prime_UTR 35.0%
GAGTGCAGAAGTAATGTAAA+AGG + chr4_4:1932541-1932560 Msa0663240:five_prime_UTR 35.0%
AATCTAGTCGAGAAAGAGAA+AGG + chr4_4:1932764-1932783 Msa0663240:five_prime_UTR 35.0%
CCTGTATAGGAAAGAGATAA+TGG - chr4_4:1932845-1932864 None:intergenic 35.0%
CCATTATCTCTTTCCTATAC+AGG + chr4_4:1932842-1932861 Msa0663240:five_prime_UTR 35.0%
TAACAACCCTCTTACTCATT+GGG + chr4_4:1932880-1932899 Msa0663240:five_prime_UTR 35.0%
! AAATATTGGCTGTTGAGAGA+AGG + chr4_4:1933069-1933088 Msa0663240:intron 35.0%
! AATATTGGCTGTTGAGAGAA+GGG + chr4_4:1933070-1933089 Msa0663240:intron 35.0%
CAAGCTTATGTCTCAAAAGA+TGG - chr4_4:1933129-1933148 None:intergenic 35.0%
CCAAACATGATGAATGATTG+AGG - chr4_4:1933282-1933301 None:intergenic 35.0%
CCTCAATCATTCATCATGTT+TGG + chr4_4:1933279-1933298 Msa0663240:intron 35.0%
! TCTTGTTTCCTAAGACTCTT+AGG + chr4_4:1933322-1933341 Msa0663240:intron 35.0%
CTCTGAACTCTTCATATCTA+TGG - chr4_4:1933557-1933576 None:intergenic 35.0%
GAAAGAGATTTAGTGTTAGC+TGG + chr4_4:1933590-1933609 Msa0663240:intron 35.0%
TCAAAGTTCCAAGAACAAAC+GGG + chr4_4:1933671-1933690 Msa0663240:five_prime_UTR 35.0%
CAACAAAAATTTGAGAAGCC+GGG - chr4_4:1933732-1933751 None:intergenic 35.0%
GCAACAAAAATTTGAGAAGC+CGG - chr4_4:1933733-1933752 None:intergenic 35.0%
! GTTGCTTTGTATTCTTCTGA+TGG + chr4_4:1933748-1933767 Msa0663240:five_prime_UTR 35.0%
ATGTGGATACTAAAGTGAGA+AGG + chr4_4:1933804-1933823 Msa0663240:five_prime_UTR 35.0%
TACTAAAGTGAGAAGGAAAG+AGG + chr4_4:1933811-1933830 Msa0663240:five_prime_UTR 35.0%
AAAACATTCAAGCACAAACC+TGG - chr4_4:1933947-1933966 None:intergenic 35.0%
GCATACATAAAGTTTCCTGA+AGG - chr4_4:1934047-1934066 None:intergenic 35.0%
GGAAACTTTATGTATGCTTC+AGG + chr4_4:1934050-1934069 Msa0663240:intron 35.0%
! GGAAACTTTTGCCGAATATA+CGG + chr4_4:1934071-1934090 Msa0663240:intron 35.0%
CAATGCACAAAGAGTTAACT+CGG + chr4_4:1934134-1934153 Msa0663240:five_prime_UTR 35.0%
CCACAATTAAAAACAAGCAG+TGG - chr4_4:1934331-1934350 None:intergenic 35.0%
!!! CCACTGCTTGTTTTTAATTG+TGG + chr4_4:1934328-1934347 Msa0663240:intron 35.0%
!!! CTGCTTGTTTTTAATTGTGG+AGG + chr4_4:1934331-1934350 Msa0663240:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG - chr4_4:1934502-1934521 None:intergenic 35.0%
TGAAATAAGGATATACCCTG+TGG - chr4_4:1934560-1934579 None:intergenic 35.0%
CATGAGTAATTAGAGGATGA+AGG + chr4_4:1934624-1934643 Msa0663240:intron 35.0%
! AACACTAATAGTGGCATTGA+CGG - chr4_4:1934709-1934728 None:intergenic 35.0%
TCTGTTACAAGGCTTGTATT+TGG + chr4_4:1934768-1934787 Msa0663240:intron 35.0%
TCCCTTGTGGAAAATTTACT+TGG + chr4_4:1934882-1934901 Msa0663240:five_prime_UTR 35.0%
! GACCAAGTAAATTTTCCACA+AGG - chr4_4:1934887-1934906 None:intergenic 35.0%
AATTTACTTGGTCAACTTGC+TGG + chr4_4:1934894-1934913 Msa0663240:five_prime_UTR 35.0%
TTGGTTGCCATACATGATTA+GGG - chr4_4:1934953-1934972 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG - chr4_4:1934954-1934973 None:intergenic 35.0%
TATGGCAACCAATACAAAGA+AGG + chr4_4:1934961-1934980 Msa0663240:five_prime_UTR 35.0%
GGAAACATCAAATGACATGT+AGG + chr4_4:1935033-1935052 Msa0663240:intron 35.0%
ACATCAAATGACATGTAGGT+AGG + chr4_4:1935037-1935056 Msa0663240:intron 35.0%
! GCTACTGTCATTACATTTTC+TGG + chr4_4:1935068-1935087 Msa0663240:intron 35.0%
!!! CATTTTCTGGAACTGACTTT+CGG + chr4_4:1935081-1935100 Msa0663240:intron 35.0%
! ACACTGCCAGTTATGAATTT+TGG - chr4_4:1935238-1935257 None:intergenic 35.0%
! AACAGCAAAAGTGTACTTGA+AGG - chr4_4:1935421-1935440 None:intergenic 35.0%
ATAATGCAGTTCAATAAGCG+AGG + chr4_4:1935484-1935503 Msa0663240:intron 35.0%
AAGCTTGAGACTTATCGAAA+TGG + chr4_4:1935562-1935581 Msa0663240:five_prime_UTR 35.0%
AGATGTATGCACAACTTCTT+CGG - chr4_4:1935593-1935612 None:intergenic 35.0%
CGATGCTTCAACTAAAAAAG+TGG + chr4_4:1935722-1935741 Msa0663240:five_prime_UTR 35.0%
TTATGAACAAGTCACCTAGA+TGG + chr4_4:1935758-1935777 Msa0663240:five_prime_UTR 35.0%
TATGAACAAGTCACCTAGAT+GGG + chr4_4:1935759-1935778 Msa0663240:five_prime_UTR 35.0%
CTGGCATGAAAATTCTATCT+TGG - chr4_4:1935825-1935844 None:intergenic 35.0%
! AAGTACCTTTTCATTTACCG+CGG + chr4_4:1935957-1935976 Msa0663240:five_prime_UTR 35.0%
AAAATCCGCGGTAAATGAAA+AGG - chr4_4:1935965-1935984 None:intergenic 35.0%
! TTTTCATTTACCGCGGATTT+TGG + chr4_4:1935964-1935983 Msa0663240:five_prime_UTR 35.0%
CGTAAATATTCCAAAATCCG+CGG - chr4_4:1935977-1935996 None:intergenic 35.0%
TACGAAGAATCCAATAACTG+AGG + chr4_4:1935993-1936012 Msa0663240:five_prime_UTR 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG + chr4_4:1936037-1936056 Msa0663240:five_prime_UTR 35.0%
!! TTAAACCCTCTAAAACTGGA+TGG - chr4_4:1936045-1936064 None:intergenic 35.0%
AGATACCATTTGAAGAGACT+TGG + chr4_4:1936108-1936127 Msa0663240:five_prime_UTR 35.0%
GATACCATTTGAAGAGACTT+GGG + chr4_4:1936109-1936128 Msa0663240:five_prime_UTR 35.0%
!! CAAAGAAACAGCCTTATTGA+TGG - chr4_4:1936157-1936176 None:intergenic 35.0%
!! AATAAGGCTGTTTCTTTGTG+TGG + chr4_4:1936159-1936178 Msa0663240:five_prime_UTR 35.0%
!! ATAAGGCTGTTTCTTTGTGT+GGG + chr4_4:1936160-1936179 Msa0663240:five_prime_UTR 35.0%
GTTTCTTTGTGTGGGAAAAA+TGG + chr4_4:1936168-1936187 Msa0663240:five_prime_UTR 35.0%
ATTAAAAACTTACCCTGTGC+TGG - chr4_4:1936199-1936218 None:intergenic 35.0%
! CATCTAAAGTCACACATGAT+CGG + chr4_4:1936293-1936312 Msa0663240:intron 35.0%
TTTACACTGTCAACAAGTCA+CGG - chr4_4:1936319-1936338 None:intergenic 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG + chr4_4:1936392-1936411 Msa0663240:intron 35.0%
TACTAATATCCGTAGCAAGA+AGG - chr4_4:1936587-1936606 None:intergenic 35.0%
CACTGTATCACTAAAACATG+CGG - chr4_4:1936634-1936653 None:intergenic 35.0%
! AAATTTTCATTCCGCACAGA+AGG - chr4_4:1936773-1936792 None:intergenic 35.0%
! GTGCGGAATGAAAATTTTAG+TGG + chr4_4:1936776-1936795 Msa0663240:five_prime_UTR 35.0%
TTCAAATGCAAGAAATGGAC+GGG + chr4_4:1936929-1936948 Msa0663240:CDS 35.0%
TTACGTGCATTCAATTTACG+TGG - chr4_4:1937105-1937124 None:intergenic 35.0%
TCATGGCCAATATAGGTAAA+CGG - chr4_4:1937426-1937445 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG - chr4_4:1937462-1937481 None:intergenic 35.0%
TGAACAATTCCTTCCTCAAA+AGG - chr4_4:1937517-1937536 None:intergenic 35.0%
!! TTTTGAGGAAGGAATTGTTC+AGG + chr4_4:1937516-1937535 Msa0663240:CDS 35.0%
!! GGTCTTAGTCTAAGATGTTT+TGG + chr4_4:1937698-1937717 Msa0663240:intron 35.0%
TGCTGTAATGTTACTGTACT+TGG + chr4_4:1937745-1937764 Msa0663240:intron 35.0%
! TCTCAGATACTTTTATCTGC+TGG - chr4_4:1937800-1937819 None:intergenic 35.0%
GAAGAAGAGTTCAGAGAAAT+AGG + chr4_4:1937921-1937940 Msa0663240:intron 35.0%
!! AGTGTTAGTTGGTGTTGTAA+TGG + chr4_4:1937961-1937980 Msa0663240:intron 35.0%
!! GTGTTAGTTGGTGTTGTAAT+GGG + chr4_4:1937962-1937981 Msa0663240:intron 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG - chr4_4:1938024-1938043 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG - chr4_4:1938025-1938044 None:intergenic 35.0%
GTTAACAACTCTTTGTGCAT+AGG - chr4_4:1938107-1938126 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG + chr4_4:1938108-1938127 Msa0663240:CDS 35.0%
ACATCGTATCAATAGACTCA+AGG - chr4_4:1938247-1938266 None:intergenic 35.0%
CCACAAATAAAAACAAGCAG+AGG - chr4_4:1938304-1938323 None:intergenic 35.0%
!!! CCTCTGCTTGTTTTTATTTG+TGG + chr4_4:1938301-1938320 Msa0663240:intron 35.0%
!!! CTGCTTGTTTTTATTTGTGG+AGG + chr4_4:1938304-1938323 Msa0663240:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG - chr4_4:1934502-1934521 None:intergenic 35.0%
TAATGAGCTCTTCTGTTGTT+GGG - chr4_4:1938500-1938519 None:intergenic 35.0%
TTAATGAGCTCTTCTGTTGT+TGG - chr4_4:1938501-1938520 None:intergenic 35.0%
! AACACTAATAGTGGCATTGA+CGG - chr4_4:1934709-1934728 None:intergenic 35.0%
! TGTGTCGATAACACTAATAG+TGG - chr4_4:1938697-1938716 None:intergenic 35.0%
GTTGAAGAAAACGTTGTACT+TGG + chr4_4:1938731-1938750 Msa0663240:intron 35.0%
TACAGTCCTTGATTTCTTGA+AGG + chr4_4:1938901-1938920 Msa0663240:intron 35.0%
ACAGTCCTTGATTTCTTGAA+GGG + chr4_4:1938902-1938921 Msa0663240:intron 35.0%
AGTTACCCTTCAAGAAATCA+AGG - chr4_4:1938910-1938929 None:intergenic 35.0%
TCTGAAAATATCACGCCAAA+AGG - chr4_4:1939160-1939179 None:intergenic 35.0%
TAAGCGCGAGACTAATATTT+GGG + chr4_4:1939184-1939203 Msa0663240:three_prime_UTR 35.0%
ATTGTGAATAAACACGCTCT+TGG + chr4_4:1939378-1939397 Msa0663240:three_prime_UTR 35.0%
CAATGGAGAAAGAGTCTGAA+AGG - chr4_4:1929146-1929165 None:intergenic 40.0%
! TCCAATCTGAAGCTCGAAAA+TGG + chr4_4:1929211-1929230 Msa0663240:five_prime_UTR 40.0%
CAGAGAAGAGAGCTAAAGAT+CGG - chr4_4:1929258-1929277 None:intergenic 40.0%
GGGAAAAAAGGAGCTTCAAT+CGG - chr4_4:1929321-1929340 None:intergenic 40.0%
TTGCAGAGAAGAGGGAAAAA+AGG - chr4_4:1929333-1929352 None:intergenic 40.0%
!! TAGTCGTTTTCTCTCTCACA+AGG + chr4_4:1929355-1929374 Msa0663240:five_prime_UTR 40.0%
!!! AGGGCCTGTTTTGTTTTGAT+TGG + chr4_4:1929659-1929678 Msa0663240:intron 40.0%
GAAGCTATTCGAGAAGAAGA+GGG + chr4_4:1929810-1929829 Msa0663240:intron 40.0%
ATTTGACCAGATTCGACAAG+TGG + chr4_4:1929833-1929852 Msa0663240:five_prime_UTR 40.0%
CTCTGAATCTGAACAGTCTT+AGG - chr4_4:1929859-1929878 None:intergenic 40.0%
CTAAGACTGTTCAGATTCAG+AGG + chr4_4:1929857-1929876 Msa0663240:five_prime_UTR 40.0%
TTCAGATTCAGAGGAAGAAG+AGG + chr4_4:1929866-1929885 Msa0663240:five_prime_UTR 40.0%
!!! AGAAGAGGATTTTGAAGCAG+AGG + chr4_4:1929881-1929900 Msa0663240:five_prime_UTR 40.0%
!!! GATTTTGAAGCAGAGGTTGA+AGG + chr4_4:1929888-1929907 Msa0663240:five_prime_UTR 40.0%
! CCAAATTTCTAGACAGCTCA+AGG - chr4_4:1929951-1929970 None:intergenic 40.0%
CCTTGAGCTGTCTAGAAATT+TGG + chr4_4:1929948-1929967 Msa0663240:five_prime_UTR 40.0%
GCTGTCTAGAAATTTGGATG+TGG + chr4_4:1929954-1929973 Msa0663240:five_prime_UTR 40.0%
GTATGGTTTAATCAGTCTGC+AGG - chr4_4:1930240-1930259 None:intergenic 40.0%
! ACATTTAGCATGTACTGGTG+CGG + chr4_4:1930129-1930148 Msa0663240:five_prime_UTR 40.0%
! TGAGCTATCTTGATGGATGT+AGG + chr4_4:1930959-1930978 Msa0663240:five_prime_UTR 40.0%
! GAGCTATCTTGATGGATGTA+GGG + chr4_4:1930960-1930979 Msa0663240:five_prime_UTR 40.0%
! ATCTTGATGGATGTAGGGAA+AGG + chr4_4:1930965-1930984 Msa0663240:five_prime_UTR 40.0%
ACACTATGGCATGATAGAGT+TGG + chr4_4:1931244-1931263 Msa0663240:five_prime_UTR 40.0%
!! TAGAGTTGGTGTGTGAATGT+AGG + chr4_4:1931258-1931277 Msa0663240:five_prime_UTR 40.0%
! AACACTACCTTTTCAGCTGA+AGG + chr4_4:1931507-1931526 Msa0663240:five_prime_UTR 40.0%
ACTTGAACCTTCAGCTGAAA+AGG - chr4_4:1931517-1931536 None:intergenic 40.0%
ATGGTCTCAGCGAAAAAGAA+AGG - chr4_4:1931579-1931598 None:intergenic 40.0%
GCTTGGATATCTATTAGGCA+TGG - chr4_4:1931598-1931617 None:intergenic 40.0%
CCAATCGGATATTGAATGCT+TGG - chr4_4:1931615-1931634 None:intergenic 40.0%
CCAAGCATTCAATATCCGAT+TGG + chr4_4:1931612-1931631 Msa0663240:five_prime_UTR 40.0%
AATATCCGATTGGAAAACCC+AGG + chr4_4:1931622-1931641 Msa0663240:five_prime_UTR 40.0%
GAAAACCCAGGAGATCAAAT+AGG + chr4_4:1931634-1931653 Msa0663240:five_prime_UTR 40.0%
ACCACCACCTACTACAATAT+CGG - chr4_4:1931751-1931770 None:intergenic 40.0%
! ATATTGTAGTAGGTGGTGGT+GGG + chr4_4:1931751-1931770 Msa0663240:intron 40.0%
GGAGAAGGTCCAAAAGAATT+AGG + chr4_4:1931778-1931797 Msa0663240:intron 40.0%
ATTAGGGCCATTGTTGAAGT+TGG + chr4_4:1931795-1931814 Msa0663240:intron 40.0%
!! TAGATGGTGGTGGAGAAATA+AGG + chr4_4:1931838-1931857 Msa0663240:intron 40.0%
! AACCATGGCCCTAATTCTTT+TGG - chr4_4:1931970-1931989 None:intergenic 40.0%
ATTAGGGCAATGGATGAAGT+TGG + chr4_4:1932149-1932168 Msa0663240:five_prime_UTR 40.0%
GCGAGATATTAGAAAAGCTG+AGG + chr4_4:1932225-1932244 Msa0663240:five_prime_UTR 40.0%
TGAAATGGAGCTATGAAGCA+CGG - chr4_4:1932379-1932398 None:intergenic 40.0%
TGCTTCATAGCTCCATTTCA+AGG + chr4_4:1932379-1932398 Msa0663240:intron 40.0%
! TTAGTGTGATGGCCTTGAAA+TGG - chr4_4:1932394-1932413 None:intergenic 40.0%
! GCTTTTACCTATATCAGGTG+TGG - chr4_4:1932578-1932597 None:intergenic 40.0%
AGACGAACAAACTACCAATC+TGG + chr4_4:1932796-1932815 Msa0663240:five_prime_UTR 40.0%
GAACACAGTTGAAACCAGAT+TGG - chr4_4:1932813-1932832 None:intergenic 40.0%
CTAACAACCCTCTTACTCAT+TGG + chr4_4:1932879-1932898 Msa0663240:five_prime_UTR 40.0%
ACAGAACCCAATGAGTAAGA+GGG - chr4_4:1932889-1932908 None:intergenic 40.0%
! ACTCTTAGGCTAAGAGGTTT+TGG + chr4_4:1933336-1933355 Msa0663240:intron 40.0%
!!! TAGGCTAAGAGGTTTTGGTT+TGG + chr4_4:1933341-1933360 Msa0663240:intron 40.0%
!! AGTGTTAGCTGGTGTTGTAA+TGG + chr4_4:1933601-1933620 Msa0663240:intron 40.0%
!! GTGTTAGCTGGTGTTGTAAT+GGG + chr4_4:1933602-1933621 Msa0663240:intron 40.0%
!! CTTGGAACTTTGAAGCCAAA+GGG - chr4_4:1933664-1933683 None:intergenic 40.0%
!! TCTTGGAACTTTGAAGCCAA+AGG - chr4_4:1933665-1933684 None:intergenic 40.0%
CAAAGTTCCAAGAACAAACG+GGG + chr4_4:1933672-1933691 Msa0663240:five_prime_UTR 40.0%
! TTTTGTTCCCCGTTTGTTCT+TGG - chr4_4:1933682-1933701 None:intergenic 40.0%
CATCTACAGCAAAATGGATG+TGG + chr4_4:1933787-1933806 Msa0663240:five_prime_UTR 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG + chr4_4:1933817-1933836 Msa0663240:five_prime_UTR 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG + chr4_4:1933818-1933837 Msa0663240:five_prime_UTR 40.0%
TGGGTAGTCTTTGTGATCAA+AGG + chr4_4:1933837-1933856 Msa0663240:five_prime_UTR 40.0%
GGGTAGTCTTTGTGATCAAA+GGG + chr4_4:1933838-1933857 Msa0663240:five_prime_UTR 40.0%
! TGCTTTGATGATTTCCCTTC+AGG + chr4_4:1934029-1934048 Msa0663240:intron 40.0%
CGAGTTAACTCTTTGTGCAT+TGG - chr4_4:1934136-1934155 None:intergenic 40.0%
GAGTTAACTCGGAAAGAAAG+CGG + chr4_4:1934145-1934164 Msa0663240:five_prime_UTR 40.0%
GAGAACCCAACAACCTAAAA+GGG - chr4_4:1934453-1934472 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG - chr4_4:1934454-1934473 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG + chr4_4:1934460-1934479 Msa0663240:five_prime_UTR 40.0%
AGCTCTTATGTTGTTGGGTT+GGG - chr4_4:1934526-1934545 None:intergenic 40.0%
AGCTGACACGTAGTGAAATA+AGG - chr4_4:1934573-1934592 None:intergenic 40.0%
ATTGGAGGTAGTTATGTTGG+AGG + chr4_4:1934843-1934862 Msa0663240:intron 40.0%
ACTGATCCCCTAATCATGTA+TGG + chr4_4:1934943-1934962 Msa0663240:five_prime_UTR 40.0%
TGGTTGCCATACATGATTAG+GGG - chr4_4:1934952-1934971 None:intergenic 40.0%
!!! TTGTTTTTGGAGATCCACAC+AGG + chr4_4:1935012-1935031 Msa0663240:intron 40.0%
GTCATTTGATGTTTCCTGTG+TGG - chr4_4:1935029-1935048 None:intergenic 40.0%
! GACATGTAGGTAGGTTTTTC+TGG + chr4_4:1935046-1935065 Msa0663240:intron 40.0%
ACCGAGCCAAAATTCATAAC+TGG + chr4_4:1935229-1935248 Msa0663240:five_prime_UTR 40.0%
!!! GCCAGTTATGAATTTTGGCT+CGG - chr4_4:1935233-1935252 None:intergenic 40.0%
GGCAACTCTGTTAAAGTAAG+TGG + chr4_4:1935317-1935336 Msa0663240:intron 40.0%
AATAGAAAGCCCGCAACAAA+TGG + chr4_4:1935538-1935557 Msa0663240:five_prime_UTR 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG - chr4_4:1935550-1935569 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG - chr4_4:1935551-1935570 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG + chr4_4:1935565-1935584 Msa0663240:five_prime_UTR 40.0%
GAAGAAGTTGTGCATACATC+TGG + chr4_4:1935592-1935611 Msa0663240:five_prime_UTR 40.0%
TGTAATCTCAAAACGCCAAG+TGG + chr4_4:1935619-1935638 Msa0663240:five_prime_UTR 40.0%
ACTCTTCATCAGCAATTAGG+TGG - chr4_4:1935695-1935714 None:intergenic 40.0%
! TTTCTAGAAGTCGAGCTATC+TGG - chr4_4:1935844-1935863 None:intergenic 40.0%
! AGCTCGACTTCTAGAAACTA+TGG + chr4_4:1935847-1935866 Msa0663240:five_prime_UTR 40.0%
! TCGACTTCTAGAAACTATGG+TGG + chr4_4:1935850-1935869 Msa0663240:five_prime_UTR 40.0%
TCTAGAAACTATGGTGGTAC+CGG + chr4_4:1935856-1935875 Msa0663240:five_prime_UTR 40.0%
ACTGATACTCAAACCAATGC+CGG - chr4_4:1935878-1935897 None:intergenic 40.0%
TAAGTGCCTAGCTGAACTAA+TGG + chr4_4:1935897-1935916 Msa0663240:five_prime_UTR 40.0%
AAGTGCCTAGCTGAACTAAT+GGG + chr4_4:1935898-1935917 Msa0663240:five_prime_UTR 40.0%
!! GAAAAGGTACTTCCAATCTG+CGG - chr4_4:1935949-1935968 None:intergenic 40.0%
TCCAATAACTGAGGTGAAGA+AGG + chr4_4:1936002-1936021 Msa0663240:five_prime_UTR 40.0%
ACCTTCTTCACCTCAGTTAT+TGG - chr4_4:1936006-1936025 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG + chr4_4:1936036-1936055 Msa0663240:five_prime_UTR 40.0%
!! GGCTTTAAACCCTCTAAAAC+TGG - chr4_4:1936049-1936068 None:intergenic 40.0%
! TTTAAAGCCGTTGTGGTTGA+TGG + chr4_4:1936060-1936079 Msa0663240:five_prime_UTR 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG + chr4_4:1936061-1936080 Msa0663240:five_prime_UTR 40.0%
GTATCCCAAGTCTCTTCAAA+TGG - chr4_4:1936116-1936135 None:intergenic 40.0%
CGATCATGTGTGACTTTAGA+TGG - chr4_4:1936295-1936314 None:intergenic 40.0%
GAGAAAGATTCATGGGTTTG+TGG + chr4_4:1936491-1936510 Msa0663240:five_prime_UTR 40.0%
CAAACTGAAGTTGAACCATC+AGG - chr4_4:1936747-1936766 None:intergenic 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG - chr4_4:1936830-1936849 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG - chr4_4:1936900-1936919 None:intergenic 40.0%
AAGCAAGCATCAAACTTGTG+AGG - chr4_4:1936901-1936920 None:intergenic 40.0%
CAAGTTTGATGCTTGCTTCA+AGG + chr4_4:1936903-1936922 Msa0663240:CDS 40.0%
! AATGCACGTAACTTGCATGT+TGG + chr4_4:1937114-1937133 Msa0663240:intron 40.0%
TTGAAGCAACTCGTCGAATT+CGG + chr4_4:1937338-1937357 Msa0663240:CDS 40.0%
CGAATGGTGAATGTAGTGAA+AGG + chr4_4:1937389-1937408 Msa0663240:CDS 40.0%
! ATGGATTACATCTGCTGTCA+TGG - chr4_4:1937443-1937462 None:intergenic 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG + chr4_4:1937474-1937493 Msa0663240:CDS 40.0%
! TGTTTGAAATGTGGGATGGA+TGG + chr4_4:1937478-1937497 Msa0663240:CDS 40.0%
!! GTCTCAAAACCTTTTGAGGA+AGG + chr4_4:1937505-1937524 Msa0663240:CDS 40.0%
! CTTTTGCAGAATATACGGCT+AGG + chr4_4:1938047-1938066 Msa0663240:CDS 40.0%
TTGTTAACTCGGAAAGAGAG+CGG + chr4_4:1938119-1938138 Msa0663240:CDS 40.0%
GTTTCCTGAGCAAATATGAC+CGG - chr4_4:1938217-1938236 None:intergenic 40.0%
GAGTCTATTGATACGATGTC+TGG + chr4_4:1938248-1938267 Msa0663240:intron 40.0%
TATTGATACGATGTCTGGAG+AGG + chr4_4:1938253-1938272 Msa0663240:intron 40.0%
! GAGCTCTCAGTATGTTTTCT+CGG - chr4_4:1938374-1938393 None:intergenic 40.0%
! AACAACCTAAAAGGGCTAGT+CGG - chr4_4:1938414-1938433 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG + chr4_4:1938414-1938433 Msa0663240:CDS 40.0%
GAGAACCCAACAACCTAAAA+GGG - chr4_4:1934453-1934472 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG - chr4_4:1934454-1934473 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG + chr4_4:1934460-1934479 Msa0663240:five_prime_UTR 40.0%
AGCTCATTAAAGTGACTGCA+GGG + chr4_4:1938511-1938530 Msa0663240:intron 40.0%
AGAAGACAATGCAAACTGCA+GGG - chr4_4:1938842-1938861 None:intergenic 40.0%
CATTCTGGCCATCAAAAAGT+CGG - chr4_4:1938988-1939007 None:intergenic 40.0%
!! ACTTTTTGATGGCCAGAATG+CGG + chr4_4:1938988-1939007 Msa0663240:CDS 40.0%
AATGCGGAGTTTAGCACATA+CGG + chr4_4:1939004-1939023 Msa0663240:CDS 40.0%
! GTATGACGACTTGGATTTCA+TGG + chr4_4:1939056-1939075 Msa0663240:three_prime_UTR 40.0%
!! TTGACTCCAACTTTCAGGTT+GGG - chr4_4:1939118-1939137 None:intergenic 40.0%
! TTTGACTCCAACTTTCAGGT+TGG - chr4_4:1939119-1939138 None:intergenic 40.0%
CTAAGCGCGAGACTAATATT+TGG + chr4_4:1939183-1939202 Msa0663240:three_prime_UTR 40.0%
GAAGAGCGGAAAAATCGCAA+TGG - chr4_4:1929193-1929212 None:intergenic 45.0%
!! GCCATTTTCGAGCTTCAGAT+TGG - chr4_4:1929215-1929234 None:intergenic 45.0%
ATGGCAATTGATGCTCGTTG+AGG + chr4_4:1929230-1929249 Msa0663240:five_prime_UTR 45.0%
TTGCTATCTCAGGTCCTGTT+TGG + chr4_4:1929557-1929576 Msa0663240:intron 45.0%
GGAAGCTATTCGAGAAGAAG+AGG + chr4_4:1929809-1929828 Msa0663240:intron 45.0%
CATGGTTTGATCAGTCTGCA+AGG - chr4_4:1930897-1930916 None:intergenic 45.0%
CTCTATCATGCCATAGTGTG+TGG - chr4_4:1931243-1931262 None:intergenic 45.0%
TTATAGAGGGAATCACGCGT+GGG - chr4_4:1931448-1931467 None:intergenic 45.0%
TTTATAGAGGGAATCACGCG+TGG - chr4_4:1931449-1931468 None:intergenic 45.0%
! GATCTCCTGGGTTTTCCAAT+CGG - chr4_4:1931630-1931649 None:intergenic 45.0%
AGGATTAGAGTTCGATGCGA+TGG + chr4_4:1931654-1931673 Msa0663240:five_prime_UTR 45.0%
!! ATGACGGATGGTGTTGAAGT+TGG + chr4_4:1931684-1931703 Msa0663240:five_prime_UTR 45.0%
AGGAGGACCGATATTGTAGT+AGG + chr4_4:1931741-1931760 Msa0663240:intron 45.0%
AGGACCGATATTGTAGTAGG+TGG + chr4_4:1931744-1931763 Msa0663240:intron 45.0%
ACCGATATTGTAGTAGGTGG+TGG + chr4_4:1931747-1931766 Msa0663240:intron 45.0%
! GATATTGTAGTAGGTGGTGG+TGG + chr4_4:1931750-1931769 Msa0663240:intron 45.0%
! TATTGTAGTAGGTGGTGGTG+GGG + chr4_4:1931752-1931771 Msa0663240:intron 45.0%
!! TGGTGGTGGAGAAATAAGGA+TGG + chr4_4:1931842-1931861 Msa0663240:intron 45.0%
GGTGGAGAAATAAGGATGGA+TGG + chr4_4:1931846-1931865 Msa0663240:intron 45.0%
! AGGATGGATGGTGTTGAAGT+TGG + chr4_4:1931858-1931877 Msa0663240:intron 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG + chr4_4:1931861-1931880 Msa0663240:intron 45.0%
AGGAGGACAGATGGTGTAAT+AGG + chr4_4:1931921-1931940 Msa0663240:intron 45.0%
AGGACAGATGGTGTAATAGG+TGG + chr4_4:1931924-1931943 Msa0663240:intron 45.0%
ACAGATGGTGTAATAGGTGG+TGG + chr4_4:1931927-1931946 Msa0663240:intron 45.0%
! ATGGTGTAATAGGTGGTGGT+GGG + chr4_4:1931931-1931950 Msa0663240:intron 45.0%
GTCCAAAAGAATTAGGGCCA+TGG + chr4_4:1931785-1931804 Msa0663240:intron 45.0%
ATTAGGGCCATGGTTGAAGT+TGG + chr4_4:1931975-1931994 Msa0663240:intron 45.0%
!! TAGATGGTGGTGGAGAAATG+AGG + chr4_4:1932018-1932037 Msa0663240:intron 45.0%
! AGGATGGATGGTGTTGAAGT+TGG + chr4_4:1931858-1931877 Msa0663240:intron 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG + chr4_4:1931861-1931880 Msa0663240:intron 45.0%
ACCACCATCTACAACTCCAT+CGG - chr4_4:1932105-1932124 None:intergenic 45.0%
TGTGTCTGACACGACACTTA+TGG - chr4_4:1932329-1932348 None:intergenic 45.0%
! GTGCGGCTTTTACCTATATC+AGG - chr4_4:1932583-1932602 None:intergenic 45.0%
AATCGATCGGAGAGTTCTAC+CGG - chr4_4:1932650-1932669 None:intergenic 45.0%
CACAGAACCCAATGAGTAAG+AGG - chr4_4:1932890-1932909 None:intergenic 45.0%
!!! AAAGACTGGTTTTGCGCCTA+GGG + chr4_4:1933003-1933022 Msa0663240:intron 45.0%
GAGTACTAATCATGCTCCCT+AGG - chr4_4:1933022-1933041 None:intergenic 45.0%
CCTCTTAGCCTAAGAGTCTT+AGG - chr4_4:1933333-1933352 None:intergenic 45.0%
CCTAAGACTCTTAGGCTAAG+AGG + chr4_4:1933330-1933349 Msa0663240:intron 45.0%
TCATTCAAGCACATAGAGCC+CGG + chr4_4:1933711-1933730 Msa0663240:five_prime_UTR 45.0%
AATGGCAGAAGGGTTTCTGT+AGG - chr4_4:1933922-1933941 None:intergenic 45.0%
AAACCTGGTCAATGGCAGAA+GGG - chr4_4:1933932-1933951 None:intergenic 45.0%
TCAAGCACAAACCTGGTCAA+TGG - chr4_4:1933940-1933959 None:intergenic 45.0%
! CTTTTGCCGAATATACGGCT+AGG + chr4_4:1934076-1934095 Msa0663240:five_prime_UTR 45.0%
GTTTGAGAAGCAGCATAGAG+TGG + chr4_4:1934167-1934186 Msa0663240:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG + chr4_4:1934200-1934219 Msa0663240:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG + chr4_4:1934205-1934224 Msa0663240:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG + chr4_4:1934206-1934225 Msa0663240:five_prime_UTR 45.0%
! GTTTGCTGAGCAAATGTGAC+AGG - chr4_4:1934243-1934262 None:intergenic 45.0%
AGCAGTGGAATGGTTCACAA+GGG - chr4_4:1934316-1934335 None:intergenic 45.0%
AAGCAGTGGAATGGTTCACA+AGG - chr4_4:1934317-1934336 None:intergenic 45.0%
!!! CATTTCTGGCTAGCCCTTTT+AGG + chr4_4:1934437-1934456 Msa0663240:five_prime_UTR 45.0%
!!! GCTAGCCCTTTTAGGTTGTT+GGG + chr4_4:1934445-1934464 Msa0663240:five_prime_UTR 45.0%
!! CTTATGTTGTTGGGTTGGGA+GGG - chr4_4:1934522-1934541 None:intergenic 45.0%
!! TCTTATGTTGTTGGGTTGGG+AGG - chr4_4:1934523-1934542 None:intergenic 45.0%
GAGCTCTTATGTTGTTGGGT+TGG - chr4_4:1934527-1934546 None:intergenic 45.0%
AGCTCATTAAAGCGACCACA+GGG + chr4_4:1934542-1934561 Msa0663240:five_prime_UTR 45.0%
TAGAGGATGAAGGTCGTGTT+TGG + chr4_4:1934634-1934653 Msa0663240:intron 45.0%
TGTTGGAGGATCCTTTGATG+TGG + chr4_4:1934857-1934876 Msa0663240:five_prime_UTR 45.0%
GAATTGAACTCAACCCAACG+TGG + chr4_4:1935144-1935163 Msa0663240:five_prime_UTR 45.0%
GAAGTTGTGCATACATCTGG+CGG + chr4_4:1935595-1935614 Msa0663240:five_prime_UTR 45.0%
TCAGCAGCTTCATATCCACT+TGG - chr4_4:1935637-1935656 None:intergenic 45.0%
TGTGTCGAAGACACTGGAAT+TGG + chr4_4:1935784-1935803 Msa0663240:five_prime_UTR 45.0%
! TAGAGGGTTTAAAGCCGTTG+TGG + chr4_4:1936053-1936072 Msa0663240:five_prime_UTR 45.0%
AGGTTTCCCATCAACCACAA+CGG - chr4_4:1936070-1936089 None:intergenic 45.0%
AGTCGCAAACGCCATCAATA+AGG + chr4_4:1936143-1936162 Msa0663240:five_prime_UTR 45.0%
AAAAATGGTGCTTCCAGCAC+AGG + chr4_4:1936183-1936202 Msa0663240:five_prime_UTR 45.0%
AAAATGGTGCTTCCAGCACA+GGG + chr4_4:1936184-1936203 Msa0663240:five_prime_UTR 45.0%
AGATTCATGGGTTTGTGGAG+AGG + chr4_4:1936496-1936515 Msa0663240:five_prime_UTR 45.0%
TCGAACGATCCTTCTTGCTA+CGG + chr4_4:1936575-1936594 Msa0663240:five_prime_UTR 45.0%
GAAGCCACTGAGAACTAGTA+TGG + chr4_4:1936659-1936678 Msa0663240:five_prime_UTR 45.0%
CCACTGAGAACTAGTATGGT+GGG + chr4_4:1936663-1936682 Msa0663240:five_prime_UTR 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG + chr4_4:1936686-1936705 Msa0663240:five_prime_UTR 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG + chr4_4:1936687-1936706 Msa0663240:five_prime_UTR 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG - chr4_4:1936695-1936714 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG + chr4_4:1936693-1936712 Msa0663240:five_prime_UTR 45.0%
! TCAGTTTGAAGCCTTCTGTG+CGG + chr4_4:1936759-1936778 Msa0663240:five_prime_UTR 45.0%
ATGTCAATGGAAGTGACTGC+AGG + chr4_4:1936802-1936821 Msa0663240:CDS 45.0%
! CGCCTTGAAAAACTTTGGAG+CGG + chr4_4:1936825-1936844 Msa0663240:CDS 45.0%
TGAAGCAACTCGTCGAATTC+GGG + chr4_4:1937339-1937358 Msa0663240:CDS 45.0%
TCTGCTGTCATGGCCAATAT+AGG - chr4_4:1937433-1937452 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG - chr4_4:1938021-1938040 None:intergenic 45.0%
GTTTGAGAAGCAGCATAGAG+TGG + chr4_4:1934167-1934186 Msa0663240:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG + chr4_4:1934200-1934219 Msa0663240:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG + chr4_4:1934205-1934224 Msa0663240:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG + chr4_4:1934206-1934225 Msa0663240:five_prime_UTR 45.0%
AACATACTGAGAGCTCCTAC+TGG + chr4_4:1938378-1938397 Msa0663240:CDS 45.0%
ACATACTGAGAGCTCCTACT+GGG + chr4_4:1938379-1938398 Msa0663240:CDS 45.0%
!! TTGTTCCGACTAGCCCTTTT+AGG + chr4_4:1938406-1938425 Msa0663240:CDS 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG + chr4_4:1938413-1938432 Msa0663240:CDS 45.0%
AGCTCTTCTGTTGTTGGGTT+GGG - chr4_4:1938495-1938514 None:intergenic 45.0%
GAGCTCATTAAAGTGACTGC+AGG + chr4_4:1938510-1938529 Msa0663240:intron 45.0%
GAAGACAATGCAAACTGCAG+GGG - chr4_4:1938841-1938860 None:intergenic 45.0%
GAGAAGACAATGCAAACTGC+AGG - chr4_4:1938843-1938862 None:intergenic 45.0%
TGTCAGGGAAACATTGCTGA+AGG + chr4_4:1938951-1938970 Msa0663240:intron 45.0%
ATGTGCTAAACTCCGCATTC+TGG - chr4_4:1939003-1939022 None:intergenic 45.0%
ATGCGGAGTTTAGCACATAC+GGG + chr4_4:1939005-1939024 Msa0663240:CDS 45.0%
GCTTCTACGGGTAATGTTGT+GGG + chr4_4:1939033-1939052 Msa0663240:exon 45.0%
CTTCTACGGGTAATGTTGTG+GGG + chr4_4:1939034-1939053 Msa0663240:exon 45.0%
GTGAATAAACACGCTCTTGG+TGG + chr4_4:1939381-1939400 Msa0663240:three_prime_UTR 45.0%
GTCTTGACTCTTGAGAGCTA+AGG + chr4_4:1939486-1939505 Msa0663240:three_prime_UTR 45.0%
CGAGCTTCAGATTGGAAGAG+CGG - chr4_4:1929207-1929226 None:intergenic 50.0%
CGACTACGTTGCAGAGAAGA+GGG - chr4_4:1929341-1929360 None:intergenic 50.0%
ACGACTACGTTGCAGAGAAG+AGG - chr4_4:1929342-1929361 None:intergenic 50.0%
CTTAGGCCACTTGTCGAATC+TGG - chr4_4:1929842-1929861 None:intergenic 50.0%
ATGCGATGGCGAAAGGATGA+CGG + chr4_4:1931668-1931687 Msa0663240:five_prime_UTR 50.0%
! ACGGATGGTGTTGAAGTTGG+CGG + chr4_4:1931687-1931706 Msa0663240:five_prime_UTR 50.0%
AGGGCCATTGTTGAAGTTGG+TGG + chr4_4:1931798-1931817 Msa0663240:intron 50.0%
!! GCCATTGTTGAAGTTGGTGG+CGG + chr4_4:1931801-1931820 Msa0663240:intron 50.0%
ACCGCCACCAACTTCAACAA+TGG - chr4_4:1931805-1931824 None:intergenic 50.0%
!! ATTGTTGAAGTTGGTGGCGG+TGG + chr4_4:1931804-1931823 Msa0663240:intron 50.0%
! AATGAGGCTGTAGATGGTGG+TGG + chr4_4:1931828-1931847 Msa0663240:intron 50.0%
! GATGGTGTAATAGGTGGTGG+TGG + chr4_4:1931930-1931949 Msa0663240:intron 50.0%
! TGGTGTAATAGGTGGTGGTG+GGG + chr4_4:1931932-1931951 Msa0663240:intron 50.0%
!! TAATAGGTGGTGGTGGGGAA+AGG + chr4_4:1931937-1931956 Msa0663240:intron 50.0%
! AATGAGGCTGTAGATGGTGG+TGG + chr4_4:1931828-1931847 Msa0663240:intron 50.0%
!! TGGTGGTGGAGAAATGAGGA+TGG + chr4_4:1932022-1932041 Msa0663240:intron 50.0%
GGTGGAGAAATGAGGATGGA+TGG + chr4_4:1932026-1932045 Msa0663240:intron 50.0%
AGGACCGATGGAGTTGTAGA+TGG + chr4_4:1932098-1932117 Msa0663240:five_prime_UTR 50.0%
ACCGATGGAGTTGTAGATGG+TGG + chr4_4:1932101-1932120 Msa0663240:five_prime_UTR 50.0%
! GATGGAGTTGTAGATGGTGG+TGG + chr4_4:1932104-1932123 Msa0663240:five_prime_UTR 50.0%
!! TTGTAGATGGTGGTGGCGAA+AGG + chr4_4:1932111-1932130 Msa0663240:five_prime_UTR 50.0%
AGGGCAATGGATGAAGTTGG+TGG + chr4_4:1932152-1932171 Msa0663240:five_prime_UTR 50.0%
!! ATGGATGAAGTTGGTGGCGA+TGG + chr4_4:1932158-1932177 Msa0663240:five_prime_UTR 50.0%
GTTGGCGATGGAGATGTACA+TGG + chr4_4:1932194-1932213 Msa0663240:five_prime_UTR 50.0%
GGAGATGTACATGGTGGTTG+TGG + chr4_4:1932203-1932222 Msa0663240:five_prime_UTR 50.0%
! AAGTGTCGTGTCAGACACAC+CGG + chr4_4:1932330-1932349 Msa0663240:intron 50.0%
TATGAAGCACGGACACTCCT+CGG - chr4_4:1932368-1932387 None:intergenic 50.0%
! GATTTAGCGGAGGCTTTGTG+CGG - chr4_4:1932600-1932619 None:intergenic 50.0%
CGAGGACATCACGGATTTAG+CGG - chr4_4:1932613-1932632 None:intergenic 50.0%
!!! CAAAGACTGGTTTTGCGCCT+AGG + chr4_4:1933002-1933021 Msa0663240:intron 50.0%
GCAAAATCAGCACCACCCTT+TGG + chr4_4:1933646-1933665 Msa0663240:five_prime_UTR 50.0%
!! GGAACTTTGAAGCCAAAGGG+TGG - chr4_4:1933661-1933680 None:intergenic 50.0%
GGATGGCTAGAGCATGAACA+TGG - chr4_4:1933901-1933920 None:intergenic 50.0%
GCAGAAGGGTTTCTGTAGGA+TGG - chr4_4:1933918-1933937 None:intergenic 50.0%
AAACCCTTCTGCCATTGACC+AGG + chr4_4:1933926-1933945 Msa0663240:five_prime_UTR 50.0%
CAAACCTGGTCAATGGCAGA+AGG - chr4_4:1933933-1933952 None:intergenic 50.0%
AGCGGTCCTAGCCGTATATT+CGG - chr4_4:1934085-1934104 None:intergenic 50.0%
!!! GGCTAGCCCTTTTAGGTTGT+TGG + chr4_4:1934444-1934463 Msa0663240:five_prime_UTR 50.0%
GAGCTCATTAAAGCGACCAC+AGG + chr4_4:1934541-1934560 Msa0663240:five_prime_UTR 50.0%
CACAAGGGACTCCACATCAA+AGG - chr4_4:1934871-1934890 None:intergenic 50.0%
CTTTGATGTGGAGTCCCTTG+TGG + chr4_4:1934869-1934888 Msa0663240:five_prime_UTR 50.0%
AGTCTGAGCATAGCCACGTT+GGG - chr4_4:1935160-1935179 None:intergenic 50.0%
TCTTCGACACAGACCCATCT+AGG - chr4_4:1935775-1935794 None:intergenic 50.0%
!! AACTATGGTGGTACCGGCAT+TGG + chr4_4:1935862-1935881 Msa0663240:five_prime_UTR 50.0%
TGCCTAGCTGAACTAATGGG+CGG + chr4_4:1935901-1935920 Msa0663240:five_prime_UTR 50.0%
TTTATAAGCCGGCCGCAGAT+TGG + chr4_4:1935934-1935953 Msa0663240:five_prime_UTR 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG - chr4_4:1936090-1936109 None:intergenic 50.0%
TCATGGGTTTGTGGAGAGGA+CGG + chr4_4:1936500-1936519 Msa0663240:five_prime_UTR 50.0%
TGCGGCAACTGGAAACAGAA+CGG + chr4_4:1936534-1936553 Msa0663240:five_prime_UTR 50.0%
GTAGCAAGAAGGATCGTTCG+AGG - chr4_4:1936576-1936595 None:intergenic 50.0%
GCCACTGAGAACTAGTATGG+TGG + chr4_4:1936662-1936681 Msa0663240:five_prime_UTR 50.0%
! CCCACCATACTAGTTCTCAG+TGG - chr4_4:1936666-1936685 None:intergenic 50.0%
AACAGGCAAGAAGAGACAGC+CGG + chr4_4:1936710-1936729 Msa0663240:five_prime_UTR 50.0%
! CCATCAGGCATCTCTTTTCC+CGG - chr4_4:1936732-1936751 None:intergenic 50.0%
GCAGGCGCCTTGAAAAACTT+TGG + chr4_4:1936820-1936839 Msa0663240:CDS 50.0%
GATGTGAAGTGTGCAGACAG+CGG + chr4_4:1936847-1936866 Msa0663240:CDS 50.0%
AACTCGTCGAATTCGGGAGA+TGG + chr4_4:1937345-1937364 Msa0663240:CDS 50.0%
AATTCGGGAGATGGAGAGGA+CGG + chr4_4:1937354-1937373 Msa0663240:CDS 50.0%
GCAAAATCAGCACCACCCTT+TGG + chr4_4:1933646-1933665 Msa0663240:five_prime_UTR 50.0%
GGTTAGGGATGAGTATGCAC+CGG + chr4_4:1934221-1934240 Msa0663240:five_prime_UTR 50.0%
! TGCACCGGTCATATTTGCTC+AGG + chr4_4:1938210-1938229 Msa0663240:intron 50.0%
GTCGGAACAAACTTCCCAGT+AGG - chr4_4:1938396-1938415 None:intergenic 50.0%
!! CTTCTGTTGTTGGGTTGGGA+GGG - chr4_4:1938491-1938510 None:intergenic 50.0%
!! TCTTCTGTTGTTGGGTTGGG+AGG - chr4_4:1938492-1938511 None:intergenic 50.0%
GAGCTCTTCTGTTGTTGGGT+TGG - chr4_4:1938496-1938515 None:intergenic 50.0%
TGCGGAGTTTAGCACATACG+GGG + chr4_4:1939006-1939025 Msa0663240:CDS 50.0%
AGTTTAGCACATACGGGGAC+TGG + chr4_4:1939011-1939030 Msa0663240:CDS 50.0%
GGCTTCTACGGGTAATGTTG+TGG + chr4_4:1939032-1939051 Msa0663240:exon 50.0%
TGTTGTGGGGTATGACGACT+TGG + chr4_4:1939047-1939066 Msa0663240:three_prime_UTR 50.0%
ATCTAGACTCCGACACGTTC+CGG + chr4_4:1939088-1939107 Msa0663240:three_prime_UTR 50.0%
!! AACTTTCAGGTTGGGTCTGC+CGG - chr4_4:1939110-1939129 None:intergenic 50.0%
ACTATTGCTGCTGTGCTCGT+TGG + chr4_4:1939208-1939227 Msa0663240:three_prime_UTR 50.0%
GAGTTCGATGCGATGGCGAA+AGG + chr4_4:1931661-1931680 Msa0663240:five_prime_UTR 55.0%
!! GATGGCGAAAGGATGACGGA+TGG + chr4_4:1931672-1931691 Msa0663240:five_prime_UTR 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG + chr4_4:1931690-1931709 Msa0663240:five_prime_UTR 55.0%
!! CTGAAGGTGGTAGTGGCGAA+AGG + chr4_4:1931721-1931740 Msa0663240:intron 55.0%
!! AAGGTGGTAGTGGCGAAAGG+AGG + chr4_4:1931724-1931743 Msa0663240:intron 55.0%
!! TAGTAGGTGGTGGTGGGGAA+AGG + chr4_4:1931757-1931776 Msa0663240:intron 55.0%
GGTGGCAATGAGGCTGTAGA+TGG + chr4_4:1931822-1931841 Msa0663240:intron 55.0%
GGCAATGAGGCTGTAGATGG+TGG + chr4_4:1931825-1931844 Msa0663240:intron 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG + chr4_4:1931690-1931709 Msa0663240:five_prime_UTR 55.0%
AGGGCCATGGTTGAAGTTGG+TGG + chr4_4:1931978-1931997 Msa0663240:intron 55.0%
!! GCCATGGTTGAAGTTGGTGG+CGG + chr4_4:1931981-1932000 Msa0663240:intron 55.0%
ACCGCCACCAACTTCAACCA+TGG - chr4_4:1931985-1932004 None:intergenic 55.0%
!! ATGGTTGAAGTTGGTGGCGG+TGG + chr4_4:1931984-1932003 Msa0663240:intron 55.0%
GGTGGCAATGAGGCTGTAGA+TGG + chr4_4:1931822-1931841 Msa0663240:intron 55.0%
GGCAATGAGGCTGTAGATGG+TGG + chr4_4:1931825-1931844 Msa0663240:intron 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG + chr4_4:1931690-1931709 Msa0663240:five_prime_UTR 55.0%
!! ATGGTGGTGGCGAAAGGAGA+AGG + chr4_4:1932117-1932136 Msa0663240:five_prime_UTR 55.0%
!! GATGAAGTTGGTGGCGATGG+CGG + chr4_4:1932161-1932180 Msa0663240:five_prime_UTR 55.0%
GGCGATGGAGATGTACATGG+TGG + chr4_4:1932197-1932216 Msa0663240:five_prime_UTR 55.0%
AGTGTCGTGTCAGACACACC+GGG + chr4_4:1932331-1932350 Msa0663240:intron 55.0%
GTGACGGCCACACCTGATAT+AGG + chr4_4:1932568-1932587 Msa0663240:five_prime_UTR 55.0%
GGACATCACGGATTTAGCGG+AGG - chr4_4:1932610-1932629 None:intergenic 55.0%
CCATTGCGACGAGGACATCA+CGG - chr4_4:1932622-1932641 None:intergenic 55.0%
TGATGTCCTCGTCGCAATGG+CGG + chr4_4:1932622-1932641 Msa0663240:five_prime_UTR 55.0%
GGCTGTTGAGAGAAGGGAGA+AGG + chr4_4:1933076-1933095 Msa0663240:intron 55.0%
! TGTGCATTGGCCACTCCACT+CGG - chr4_4:1934123-1934142 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG + chr4_4:1934465-1934484 Msa0663240:five_prime_UTR 55.0%
CAGTCTGAGCATAGCCACGT+TGG - chr4_4:1935161-1935180 None:intergenic 55.0%
CTCAGACTGCTCAAGCGTGT+GGG + chr4_4:1935172-1935191 Msa0663240:five_prime_UTR 55.0%
TGGGTCTGTGTCGAAGACAC+TGG + chr4_4:1935778-1935797 Msa0663240:five_prime_UTR 55.0%
GACCGCCCATTAGTTCAGCT+AGG - chr4_4:1935906-1935925 None:intergenic 55.0%
AGGTACTTCCAATCTGCGGC+CGG - chr4_4:1935945-1935964 None:intergenic 55.0%
CATGGGTTTGTGGAGAGGAC+GGG + chr4_4:1936501-1936520 Msa0663240:five_prime_UTR 55.0%
AGGACGGGATCTTCAGTGTG+CGG + chr4_4:1936516-1936535 Msa0663240:five_prime_UTR 55.0%
GATCTTCAGTGTGCGGCAAC+TGG + chr4_4:1936523-1936542 Msa0663240:five_prime_UTR 55.0%
ACAGGCAAGAAGAGACAGCC+GGG + chr4_4:1936711-1936730 Msa0663240:five_prime_UTR 55.0%
CCGGGAAAAGAGATGCCTGA+TGG + chr4_4:1936729-1936748 Msa0663240:five_prime_UTR 55.0%
GTCGAATTCGGGAGATGGAG+AGG + chr4_4:1937350-1937369 Msa0663240:CDS 55.0%
ACGGCGAATGAGGAGACGAA+TGG + chr4_4:1937373-1937392 Msa0663240:CDS 55.0%
CGGCTAGGACCACTTTCGAA+AGG + chr4_4:1938062-1938081 Msa0663240:CDS 55.0%
TGTGCATAGGCCACTCCACT+CGG - chr4_4:1938094-1938113 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG + chr4_4:1934465-1934484 Msa0663240:five_prime_UTR 55.0%
!! CATACGGGGACTGGCTTCTA+CGG + chr4_4:1939020-1939039 Msa0663240:CDS 55.0%
!! ATACGGGGACTGGCTTCTAC+GGG + chr4_4:1939021-1939040 Msa0663240:CDS 55.0%
GGCAGACCCAACCTGAAAGT+TGG + chr4_4:1939109-1939128 Msa0663240:three_prime_UTR 55.0%
!!! GCTGTGCTCGTTGGCTCTTT+TGG + chr4_4:1939217-1939236 Msa0663240:three_prime_UTR 55.0%
GTTGAAGTTGGCGGTGGCAC+CGG + chr4_4:1931696-1931715 Msa0663240:five_prime_UTR 60.0%
ACCGGAGCTGAAGGTGGTAG+TGG + chr4_4:1931714-1931733 Msa0663240:intron 60.0%
GCCACTACCACCTTCAGCTC+CGG - chr4_4:1931718-1931737 None:intergenic 60.0%
!! GTGGTGGTGGGGAAAGGAGA+AGG + chr4_4:1931763-1931782 Msa0663240:intron 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG + chr4_4:1931812-1931831 Msa0663240:intron 60.0%
! GGTGTTGAAGTTGGCGGTGG+CGG + chr4_4:1931693-1931712 Msa0663240:five_prime_UTR 60.0%
! ACCAGAGCTGAAGGTGGTGG+TGG + chr4_4:1931894-1931913 Msa0663240:intron 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG + chr4_4:1931901-1931920 Msa0663240:intron 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG + chr4_4:1931904-1931923 Msa0663240:intron 60.0%
GGTGGCGAAAGGAGGACAGA+TGG + chr4_4:1931912-1931931 Msa0663240:intron 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG + chr4_4:1931812-1931831 Msa0663240:intron 60.0%
GTTGAAGTTGGCGGTGGCAC+CGG + chr4_4:1931696-1931715 Msa0663240:five_prime_UTR 60.0%
!! CTGAAGGTGGTGGAGGGGAA+AGG + chr4_4:1932075-1932094 Msa0663240:intron 60.0%
!! AAGGTGGTGGAGGGGAAAGG+AGG + chr4_4:1932078-1932097 Msa0663240:intron 60.0%
! ACGGACACTCCTCGGATTGG+GGG - chr4_4:1932360-1932379 None:intergenic 60.0%
CACGGACACTCCTCGGATTG+GGG - chr4_4:1932361-1932380 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+GGG - chr4_4:1932362-1932381 None:intergenic 60.0%
AGCACGGACACTCCTCGGAT+TGG - chr4_4:1932363-1932382 None:intergenic 60.0%
CCGTGATGTCCTCGTCGCAA+TGG + chr4_4:1932619-1932638 Msa0663240:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG + chr4_4:1934091-1934110 Msa0663240:five_prime_UTR 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG - chr4_4:1934103-1934122 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG + chr4_4:1934105-1934124 Msa0663240:five_prime_UTR 60.0%
TTGGCCACTCCACTCGGTAG+CGG - chr4_4:1934117-1934136 None:intergenic 60.0%
GCTCAGACTGCTCAAGCGTG+TGG + chr4_4:1935171-1935190 Msa0663240:five_prime_UTR 60.0%
GACTGCTCAAGCGTGTGGGA+AGG + chr4_4:1935176-1935195 Msa0663240:five_prime_UTR 60.0%
GATGGAGAGGACGGCGAATG+AGG + chr4_4:1937363-1937382 Msa0663240:CDS 60.0%
! CGGTAGCGGCCTTTCGAAAG+TGG - chr4_4:1934103-1934122 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG + chr4_4:1934105-1934124 Msa0663240:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG - chr4_4:1938088-1938107 None:intergenic 60.0%
TTGGGTCTGCCGGAACGTGT+CGG - chr4_4:1939100-1939119 None:intergenic 60.0%
! GTTGAAGTTGGCGGTGGCGG+TGG + chr4_4:1931870-1931889 Msa0663240:intron 65.0%
GGTGGCACCAGAGCTGAAGG+TGG + chr4_4:1931888-1931907 Msa0663240:intron 65.0%
GGCACCAGAGCTGAAGGTGG+TGG + chr4_4:1931891-1931910 Msa0663240:intron 65.0%
GCCACCACCACCTTCAGCTC+TGG - chr4_4:1931898-1931917 None:intergenic 65.0%
! ACCGGAGCTGAAGGTGGTGG+AGG + chr4_4:1932068-1932087 Msa0663240:intron 65.0%
CCCTCCACCACCTTCAGCTC+CGG - chr4_4:1932072-1932091 None:intergenic 65.0%
!! CCGGAGCTGAAGGTGGTGGA+GGG + chr4_4:1932069-1932088 Msa0663240:intron 65.0%
!! CGGAGCTGAAGGTGGTGGAG+GGG + chr4_4:1932070-1932089 Msa0663240:intron 65.0%
GGAGGGGAAAGGAGGACCGA+TGG + chr4_4:1932086-1932105 Msa0663240:five_prime_UTR 65.0%
!! GTTGGTGGCGATGGCGGTTG+CGG + chr4_4:1932167-1932186 Msa0663240:five_prime_UTR 65.0%
! GATGGCGGTTGCGGTGGTGT+TGG + chr4_4:1932176-1932195 Msa0663240:five_prime_UTR 65.0%
!! GGTTGCGGTGGTGTTGGCGA+TGG + chr4_4:1932182-1932201 Msa0663240:five_prime_UTR 65.0%
!! TCCTCGGATTGGGGGTGTCC+CGG - chr4_4:1932352-1932371 None:intergenic 65.0%
CCTCGTCGCAATGGCGGTTC+CGG + chr4_4:1932628-1932647 Msa0663240:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG + chr4_4:1934110-1934129 Msa0663240:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG + chr4_4:1934110-1934129 Msa0663240:five_prime_UTR 65.0%
! GGTGGCACCGGAGCTGAAGG+TGG + chr4_4:1931708-1931727 Msa0663240:intron 70.0%
GGCGGTGGCACCAGAGCTGA+AGG + chr4_4:1931885-1931904 Msa0663240:intron 70.0%
! GGTGGCACCGGAGCTGAAGG+TGG + chr4_4:1931708-1931727 Msa0663240:intron 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG + chr4_4:1931711-1931730 Msa0663240:intron 70.0%
ACCGGGACACCCCCAATCCG+AGG + chr4_4:1932348-1932367 Msa0663240:intron 70.0%
CCGGAACCGCCATTGCGACG+AGG - chr4_4:1932631-1932650 None:intergenic 70.0%
! GGCGGTGGCACCGGAGCTGA+AGG + chr4_4:1931705-1931724 Msa0663240:five_prime_UTR 75.0%
! GGCGGTGGCACCGGAGCTGA+AGG + chr4_4:1931705-1931724 Msa0663240:five_prime_UTR 75.0%
! GGTGGCGATGGCGGTTGCGG+TGG + chr4_4:1932170-1932189 Msa0663240:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 1929130 1939523 1929130 ID=Msa0663240;Name=Msa0663240
chr4_4 mRNA 1929130 1939523 1929130 ID=Msa0663240-mRNA-1;Parent=Msa0663240;Name=Msa0663240-mRNA-1;_AED=0.12;_eAED=0.12;_QI=4328|0.8|0.87|1|0.26|0.25|16|477|271
chr4_4 exon 1929130 1929376 1929130 ID=Msa0663240-mRNA-1:exon:488;Parent=Msa0663240-mRNA-1
chr4_4 exon 1929814 1930184 1929814 ID=Msa0663240-mRNA-1:exon:489;Parent=Msa0663240-mRNA-1
chr4_4 exon 1930843 1931726 1930843 ID=Msa0663240-mRNA-1:exon:490;Parent=Msa0663240-mRNA-1
chr4_4 exon 1932081 1932266 1932081 ID=Msa0663240-mRNA-1:exon:491;Parent=Msa0663240-mRNA-1
chr4_4 exon 1932438 1932944 1932438 ID=Msa0663240-mRNA-1:exon:492;Parent=Msa0663240-mRNA-1
chr4_4 exon 1933609 1933947 1933609 ID=Msa0663240-mRNA-1:exon:493;Parent=Msa0663240-mRNA-1
chr4_4 exon 1934072 1934301 1934072 ID=Msa0663240-mRNA-1:exon:494;Parent=Msa0663240-mRNA-1
chr4_4 exon 1934394 1934563 1934394 ID=Msa0663240-mRNA-1:exon:495;Parent=Msa0663240-mRNA-1
chr4_4 exon 1934854 1934982 1934854 ID=Msa0663240-mRNA-1:exon:496;Parent=Msa0663240-mRNA-1
chr4_4 exon 1935119 1935331 1935119 ID=Msa0663240-mRNA-1:exon:497;Parent=Msa0663240-mRNA-1
chr4_4 exon 1935493 1936205 1935493 ID=Msa0663240-mRNA-1:exon:498;Parent=Msa0663240-mRNA-1
chr4_4 exon 1936463 1936950 1936463 ID=Msa0663240-mRNA-1:exon:499;Parent=Msa0663240-mRNA-1
chr4_4 exon 1937336 1937537 1937336 ID=Msa0663240-mRNA-1:exon:500;Parent=Msa0663240-mRNA-1
chr4_4 exon 1937998 1938216 1937998 ID=Msa0663240-mRNA-1:exon:501;Parent=Msa0663240-mRNA-1
chr4_4 exon 1938366 1938521 1938366 ID=Msa0663240-mRNA-1:exon:502;Parent=Msa0663240-mRNA-1
chr4_4 exon 1938957 1939523 1938957 ID=Msa0663240-mRNA-1:exon:503;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1929130 1929376 1929130 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1929814 1930184 1929814 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1930843 1931726 1930843 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1932081 1932266 1932081 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1932438 1932944 1932438 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1933609 1933947 1933609 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1934072 1934301 1934072 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1934394 1934563 1934394 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1934854 1934982 1934854 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1935119 1935331 1935119 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1935493 1936205 1935493 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 five_prime_UTR 1936463 1936801 1936463 ID=Msa0663240-mRNA-1:five_prime_utr;Parent=Msa0663240-mRNA-1
chr4_4 CDS 1936802 1936950 1936802 ID=Msa0663240-mRNA-1:cds;Parent=Msa0663240-mRNA-1
chr4_4 CDS 1937336 1937537 1937336 ID=Msa0663240-mRNA-1:cds;Parent=Msa0663240-mRNA-1
chr4_4 CDS 1937998 1938216 1937998 ID=Msa0663240-mRNA-1:cds;Parent=Msa0663240-mRNA-1
chr4_4 CDS 1938366 1938521 1938366 ID=Msa0663240-mRNA-1:cds;Parent=Msa0663240-mRNA-1
chr4_4 CDS 1938957 1939046 1938957 ID=Msa0663240-mRNA-1:cds;Parent=Msa0663240-mRNA-1
chr4_4 three_prime_UTR 1939047 1939523 1939047 ID=Msa0663240-mRNA-1:three_prime_utr;Parent=Msa0663240-mRNA-1
Gene Sequence

>Msa0663240

ATGTCAATGGAAGTGACTGCAGGCGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCAGACAGCGGCAAAGCTGCTCTTGAAATGCTTCTATTCCCTCACAAGTTTGATGCTTGCTTCAAGGATATTCAAATGCAAGAAATGGACGGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACGGCGAATGAGGAGACGAATGGTGAATGTAGTGAAAGGAAAAGTAAATTCCGTTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGGAATTGTTCAGATGAAGATGCAAAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAAACTTTTGCAGAATATACGGCTAGGACCACTTTCGAAAGGCCGCTACCGAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCGGTTTGAGAAGCAGCATAGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACAGGTTAGGGATGAGTATGCACCGGATGACCGAGAAAACATACTGAGAGCTCCTACTGGGAAGTTTGTTCCGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATTTAAGCTCCCTCCCAACCCAACAACAGAAGAGCTCATTAAAGGAAACATTGCTGAAGGTGCACTTTTAACCGACTTTTTGATGGCCAGAATGCGGAGTTTAGCACATACGGGGACTGGCTTCTACGGGTAA
Protein sequence

>Msa0663240

MSMEVTAGALKNFGADVKCADSGKAALEMLLFPHKFDACFKDIQMQEMDGFEATRRIREMERTANEETNGECSERKSKFRLPILAMTADVIHATYEECLKCGMDGYVSKPFEEGIVQMKMQNQHHPLASKLQETFAEYTARTTFERPLPSGVAYAQRVVNSERERFEKQHRVVIKTMEREASQVRDEYAPDDRENILRAPTGKFVPTSPFRLLGSHHLGVVLTFPVYKFKLPPNPTTEELIKGNIAEGALLTDFLMARMRSLAHTGTGFYG*