AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0224320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224320 MtrunA17_Chr2g0330311 93.542 511 28 4 1 508 1 509 0.0 958
Msa0224320 MtrunA17_Chr3g0097231 84.894 331 49 1 178 508 153 482 0.0 593
Msa0224320 MtrunA17_Chr2g0330331 86.408 309 42 0 181 489 21 329 0.0 558
Msa0224320 MtrunA17_Chr1g0186811 40.702 285 157 6 213 496 26 299 9.94e-67 218
Msa0224320 MtrunA17_Chr7g0274931 43.775 249 132 5 225 472 38 279 1.30e-65 215
Msa0224320 MtrunA17_Chr7g0272371 39.858 281 160 6 194 472 8 281 1.66e-65 214
Msa0224320 MtrunA17_Chr8g0334361 42.400 250 136 5 224 472 35 277 1.70e-65 214
Msa0224320 MtrunA17_Chr1g0190121 42.570 249 135 5 225 472 38 279 4.49e-65 214
Msa0224320 MtrunA17_Chr5g0436061 43.373 249 133 5 225 472 55 296 4.86e-65 213
Msa0224320 MtrunA17_Chr8g0387541 38.365 318 179 8 194 505 4 310 1.54e-64 212
Msa0224320 MtrunA17_Chr1g0167751 39.623 265 152 5 209 472 22 279 1.28e-61 204
Msa0224320 MtrunA17_Chr8g0364041 42.915 247 134 6 246 490 49 290 9.24e-59 196
Msa0224320 MtrunA17_Chr5g0415261 42.510 247 135 6 246 490 49 290 2.89e-58 195
Msa0224320 MtrunA17_Chr8g0378521 42.126 254 137 7 246 494 51 299 2.39e-57 193
Msa0224320 MtrunA17_Chr7g0268381 41.732 254 138 7 246 494 56 304 4.28e-57 192
Msa0224320 MtrunA17_Chr5g0445011 41.935 248 138 6 246 491 46 289 3.97e-55 187
Msa0224320 MtrunA17_Chr1g0165341 43.644 236 128 5 241 474 40 272 1.36e-53 182
Msa0224320 MtrunA17_Chr8g0369981 32.791 369 187 10 190 497 70 438 2.61e-47 170
Msa0224320 MtrunA17_Chr2g0322121 35.106 282 159 7 207 472 658 931 1.28e-44 168
Msa0224320 MtrunA17_Chr4g0025471 35.000 280 162 7 207 472 663 936 1.72e-43 165
Msa0224320 MtrunA17_Chr1g0196211 38.333 180 96 6 303 471 5 180 3.88e-30 118
Msa0224320 MtrunA17_Chr2g0330011 34.395 157 87 5 193 335 198 352 2.36e-18 86.7
Msa0224320 MtrunA17_Chr1g0206841 61.818 55 21 0 74 128 1 55 3.86e-15 71.2
Msa0224320 MtrunA17_Chr1g0206861 63.636 55 20 0 74 128 1 55 6.56e-15 72.4
Msa0224320 MtrunA17_Chr1g0206821 65.385 52 18 0 77 128 5 56 4.08e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224320 AT2G42810.1 73.713 369 95 2 141 508 117 484 0.0 571
Msa0224320 AT2G42810.5 73.713 369 95 2 141 508 117 484 0.0 571
Msa0224320 AT2G42810.4 73.713 369 95 2 141 508 117 484 0.0 571
Msa0224320 AT2G42810.2 80.060 331 65 1 178 508 209 538 0.0 570
Msa0224320 AT2G42810.3 79.819 332 66 1 177 508 207 537 0.0 570
Msa0224320 AT5G27840.1 43.701 254 135 5 220 472 39 285 9.06e-67 218
Msa0224320 AT5G27840.4 43.701 254 135 5 220 472 39 285 9.25e-67 218
Msa0224320 AT5G27840.2 43.701 254 135 5 220 472 39 285 1.41e-66 218
Msa0224320 AT5G27840.3 43.701 254 135 5 220 472 39 285 1.41e-66 218
Msa0224320 AT3G46820.1 39.721 287 159 6 193 472 10 289 2.93e-66 216
Msa0224320 AT5G59160.3 36.977 311 178 7 193 496 10 309 1.49e-65 215
Msa0224320 AT5G59160.2 36.977 311 178 7 193 496 10 309 1.49e-65 215
Msa0224320 AT5G59160.1 36.977 311 178 7 193 496 10 309 1.49e-65 215
Msa0224320 AT2G29400.1 41.154 260 146 4 213 472 43 295 4.15e-65 214
Msa0224320 AT3G05580.1 41.455 275 148 7 220 492 39 302 5.35e-65 213
Msa0224320 AT5G43380.1 42.126 254 139 5 220 472 33 279 1.62e-64 213
Msa0224320 AT5G43380.3 42.126 254 139 5 220 472 33 279 1.88e-64 212
Msa0224320 AT5G43380.2 42.126 254 139 5 220 472 33 279 1.96e-64 212
Msa0224320 AT2G39840.1 39.161 286 161 6 193 472 15 293 9.56e-63 207
Msa0224320 AT4G11240.1 41.732 254 140 5 220 472 34 280 3.26e-62 206
Msa0224320 AT1G64040.1 38.596 285 163 6 193 472 3 280 1.32e-61 205
Msa0224320 AT2G42500.1 42.520 254 136 7 246 494 56 304 1.36e-59 199
Msa0224320 AT1G10430.2 43.320 247 133 6 246 490 49 290 2.26e-59 198
Msa0224320 AT1G10430.1 43.320 247 133 6 246 490 49 290 2.26e-59 198
Msa0224320 AT1G59830.1 43.320 247 133 6 246 490 49 290 5.84e-59 197
Msa0224320 AT1G69960.1 38.225 293 170 7 200 490 8 291 2.61e-58 196
Msa0224320 AT3G58500.1 41.732 254 138 7 246 494 56 304 1.19e-57 194
Msa0224320 AT5G55260.1 36.545 301 181 7 200 498 4 296 2.52e-56 190
Msa0224320 AT4G26720.1 40.784 255 145 6 246 498 46 296 2.60e-56 190
Msa0224320 AT3G05580.2 43.182 220 117 5 220 438 39 251 4.59e-55 186
Msa0224320 AT1G50370.1 43.644 236 128 5 241 474 40 272 1.98e-53 182
Msa0224320 AT3G19980.1 42.797 236 130 5 241 474 40 272 5.98e-52 179
Msa0224320 AT5G63870.1 32.976 373 183 12 191 496 13 385 1.06e-50 179
Msa0224320 AT5G63870.2 32.976 373 183 12 191 496 13 385 1.06e-50 179
Msa0224320 AT1G03445.2 36.678 289 157 8 224 498 487 763 2.28e-50 184
Msa0224320 AT1G03445.1 36.678 289 157 8 224 498 487 763 2.55e-50 184
Msa0224320 AT5G55260.2 32.749 342 179 9 200 498 4 337 1.82e-49 173
Msa0224320 AT2G42500.2 39.357 249 142 6 251 494 13 257 4.81e-49 170
Msa0224320 AT1G59830.2 45.771 201 103 5 246 444 49 245 7.32e-49 169
Msa0224320 AT4G03080.1 39.506 243 127 7 246 472 579 817 7.35e-44 166
Msa0224320 AT2G27210.1 34.643 280 163 7 207 472 669 942 1.11e-41 160
Msa0224320 AT2G27210.2 34.643 280 163 7 207 472 664 937 1.14e-41 160
Msa0224320 AT1G08420.2 34.643 280 163 7 207 472 675 948 4.09e-41 158
Msa0224320 AT1G08420.1 34.643 280 163 7 207 472 680 953 4.43e-41 158
Msa0224320 AT1G48120.1 30.966 352 174 12 220 507 630 976 1.09e-36 145
Msa0224320 AT5G63870.3 30.986 284 152 6 191 430 13 296 1.16e-35 135
Msa0224320 AT5G10900.2 32.042 284 152 10 246 490 225 506 1.70e-32 131
Msa0224320 AT5G10900.3 32.042 284 152 10 246 490 225 506 1.99e-32 131
Msa0224320 AT5G10900.1 32.042 284 152 10 246 490 225 506 2.36e-32 131
Msa0224320 AT2G42500.4 41.026 117 66 2 241 354 51 167 3.55e-22 94.4
Msa0224320 AT2G42500.3 42.478 113 62 2 241 350 51 163 3.59e-22 94.0
Msa0224320 AT2G42500.5 42.478 113 62 2 241 350 51 163 5.25e-22 93.6

Find 110 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTACTTTACAGCGTATT+TGG 0.182133 2_1:+74184595 Msa0224320:three_prime_UTR
CGCTTGCTTGGTCCTCTTCC+AGG 0.183340 2_1:-74183393 None:intergenic
TCAATCATTGGCAGCTCTTC+TGG 0.184153 2_1:-74184448 None:intergenic
GCTCATTCACACTGGATTAA+AGG 0.198054 2_1:+74180159 Msa0224320:CDS
GTTACCTGATCACAGTAATT+TGG 0.220828 2_1:-74183636 None:intergenic
TGCTGGAGTTGGGCTGTTCT+TGG 0.228121 2_1:-74180807 None:intergenic
TTAAGCACAAGGGAAATATT+TGG 0.244278 2_1:+74184488 Msa0224320:three_prime_UTR
AGATGTCGAGCCACGGTATT+CGG 0.257986 2_1:+74181010 Msa0224320:intron
AAGAGCATGAACAAGATATT+TGG 0.260261 2_1:+74183033 Msa0224320:CDS
GAAAATCCATATCTATTTAA+TGG 0.277620 2_1:+74182417 Msa0224320:CDS
TTCTTGAAGGATAATAATTT+AGG 0.289596 2_1:+74183459 Msa0224320:CDS
ATATGGAAGATGATGGAATT+TGG 0.322793 2_1:-74184742 None:intergenic
GCTTCAAATGTAATAATGTT+AGG 0.325705 2_1:-74183871 None:intergenic
GGGCAGAGGCATTGTGTTGC+CGG 0.333404 2_1:-74177984 None:intergenic
GATGTCGAGCCACGGTATTC+GGG 0.336263 2_1:+74181011 Msa0224320:intron
CTCAAATCCGATCAATTAAT+CGG 0.338994 2_1:+74183205 Msa0224320:CDS
ATATTTGGCTAGAGAAGATT+TGG 0.340335 2_1:+74184503 Msa0224320:three_prime_UTR
AGAAGGAGATACTATTACTT+TGG 0.348174 2_1:+74181043 Msa0224320:CDS
TGACCCCATCAACACTAAAA+AGG 0.352827 2_1:-74183176 None:intergenic
TTTCAACATTTGATCCGTTT+GGG 0.355054 2_1:+74177900 Msa0224320:intron
AGCAAACATCTTGGAAACCT+TGG 0.372120 2_1:-74178084 None:intergenic
CACATAGTGATGGTTGTAAT+AGG 0.384920 2_1:+74180105 Msa0224320:CDS
CCTCTGCCCTTGGCCTTGCT+TGG 0.391689 2_1:+74177998 Msa0224320:CDS
AGTATTCAACTGTTTACCTT+TGG 0.392464 2_1:+74183113 Msa0224320:CDS
ATAATGTTAGGTTGCAAATC+AGG 0.399962 2_1:-74183859 None:intergenic
TCACCTTTGAAACAAGGTTT+AGG 0.402886 2_1:-74178152 None:intergenic
TTCAAAACAGCATCAATCAT+TGG 0.405737 2_1:-74184460 None:intergenic
AAGTCACCATTAAATAGATA+TGG 0.408912 2_1:-74182423 None:intergenic
AATGGTGACTTTGTAGATAG+AGG 0.410819 2_1:+74182435 Msa0224320:CDS
TGCTCCAAATTACTGTGATC+AGG 0.411289 2_1:+74183632 Msa0224320:CDS
CAAATTTGTCAAAATGTTTG+CGG 0.411891 2_1:+74183089 Msa0224320:CDS
CATCTTCCATATAACAAAAT+CGG 0.415509 2_1:+74184753 Msa0224320:three_prime_UTR
GAAAATGATGAATGATTTCA+AGG 0.418810 2_1:+74181076 Msa0224320:CDS
CACCCATCGCCACGCTTGCT+TGG 0.419484 2_1:-74183405 None:intergenic
CAACACAATGCCTCTGCCCT+TGG 0.423197 2_1:+74177988 Msa0224320:CDS
CCAAGTTGCTATGTCTTCTC+CGG 0.428094 2_1:+74177965 Msa0224320:exon
AGGTGCTTCAAATCGAATAA+AGG 0.429933 2_1:-74183839 None:intergenic
TTATGTGTCTTACCTTCATC+AGG 0.430537 2_1:-74183240 None:intergenic
TAAGCCATTGGCTTAACATC+AGG 0.430731 2_1:-74184366 None:intergenic
GTGATGGTTGTAATAGGATC+TGG 0.445017 2_1:+74180111 Msa0224320:CDS
CCAAGCAAGGCCAAGGGCAG+AGG 0.446808 2_1:-74177998 None:intergenic
GGACCAAGCAAGCGTGGCGA+TGG 0.448883 2_1:+74183402 Msa0224320:CDS
GGAAAACATGTTACTGTTTG+TGG 0.453376 2_1:+74181300 Msa0224320:CDS
CCTCTTCCAGGGAGAGATTG+TGG 0.467154 2_1:-74183381 None:intergenic
TATTCGGGATCAAGAATAGA+AGG 0.467809 2_1:+74181026 Msa0224320:CDS
TTGGTGAGGATGTTACAAAA+AGG 0.470459 2_1:+74183436 Msa0224320:CDS
CACAAAACCGATTAATTGAT+CGG 0.472508 2_1:-74183212 None:intergenic
TACATACAAGTGCTGGAGTT+GGG 0.482157 2_1:-74180817 None:intergenic
CAAGGCTTGAGCAAACATCT+TGG 0.488578 2_1:-74178093 None:intergenic
GAACAGAAGTGCTTGGATAG+AGG 0.488821 2_1:+74181098 Msa0224320:CDS
TGGAGTGTTGTCATTGGCAT+TGG 0.496570 2_1:+74180131 Msa0224320:CDS
TAAGAGATACATACAAGTGC+TGG 0.500612 2_1:-74180824 None:intergenic
GGTTTAGGTAGCTGTGATGC+AGG 0.502133 2_1:-74178137 None:intergenic
CTGCGAGTTGAGACAGACTT+TGG 0.502711 2_1:-74178032 None:intergenic
GATGGTCGCATAAATCGAAC+AGG 0.503746 2_1:+74179942 Msa0224320:CDS
CTACCTAAACCTTGTTTCAA+AGG 0.504184 2_1:+74178149 Msa0224320:CDS
GATGCGACCAAGCAAGGCCA+AGG 0.507282 2_1:-74178005 None:intergenic
GCTTGCTTGGTCCTCTTCCA+GGG 0.507675 2_1:-74183392 None:intergenic
GTATTGATTATGAGAACAAT+CGG 0.508663 2_1:-74184404 None:intergenic
AGGATCTGGAGTGTTGTCAT+TGG 0.509319 2_1:+74180125 Msa0224320:CDS
TTTAAGTGCATGTCTCCATC+TGG 0.511692 2_1:+74182495 Msa0224320:CDS
AATATGAAATTAGATAAGAA+AGG 0.516073 2_1:+74180670 Msa0224320:intron
CCACAATCTCTCCCTGGAAG+AGG 0.518654 2_1:+74183381 Msa0224320:CDS
AACAGAAGTGCTTGGATAGA+GGG 0.518754 2_1:+74181099 Msa0224320:CDS
CATTATTACATTTGAAGCAG+TGG 0.519521 2_1:+74183876 Msa0224320:CDS
ATACATACAAGTGCTGGAGT+TGG 0.523075 2_1:-74180818 None:intergenic
TTTCAAGGAACAGAAGTGCT+TGG 0.526048 2_1:+74181091 Msa0224320:CDS
GGTGTAGATGCGACCAAGCA+AGG 0.526293 2_1:-74178011 None:intergenic
CACGGTTGCATCACAATCCA+AGG 0.528754 2_1:+74178067 Msa0224320:CDS
TGTTTCAATCTATATGAGAA+TGG 0.532481 2_1:-74184647 None:intergenic
ATATGAAATTAGATAAGAAA+GGG 0.533263 2_1:+74180671 Msa0224320:intron
TGAAGGAACGTTGTTAATTG+TGG 0.534020 2_1:+74180077 Msa0224320:intron
GAAGGAACGTTGTTAATTGT+GGG 0.537165 2_1:+74180078 Msa0224320:intron
GACCAAGCAAGCGTGGCGAT+GGG 0.539781 2_1:+74183403 Msa0224320:CDS
AAGTTGTTTGCATAAGCCAT+TGG 0.545433 2_1:-74184378 None:intergenic
TGGCTATTGCTCATTCACAC+TGG 0.550642 2_1:+74180151 Msa0224320:CDS
TTGTGGCGATGTGCATGGTC+AGG 0.553831 2_1:+74181317 Msa0224320:CDS
CAACATTTGATCCGTTTGGG+TGG 0.553891 2_1:+74177903 Msa0224320:intron
GGTTGATGCATGACTTGCTA+TGG 0.557053 2_1:+74183352 Msa0224320:CDS
CCGGAGAAGACATAGCAACT+TGG 0.561468 2_1:-74177965 None:intergenic
TTGTTTATCACATGAGCCAA+AGG 0.562219 2_1:-74183129 None:intergenic
ATTTCCTCTAGCTATATACA+TGG 0.570325 2_1:-74183001 None:intergenic
ACAGTTATGTCAACAAGAGA+AGG 0.573846 2_1:-74181270 None:intergenic
GTAACAAGATGCCACCCAAA+CGG 0.575789 2_1:-74177914 None:intergenic
GTTGACATAACTGTTCCTCA+TGG 0.581296 2_1:+74181279 Msa0224320:CDS
CGCTAATAGATGTCGAGCCA+CGG 0.583396 2_1:+74181003 Msa0224320:intron
ATTTGCTCACCTTTGAAACA+AGG 0.585157 2_1:-74178158 None:intergenic
AGTGATCCACAATCTCTCCC+TGG 0.590132 2_1:+74183375 Msa0224320:CDS
ACTGTTTGTGGCGATGTGCA+TGG 0.597060 2_1:+74181312 Msa0224320:CDS
ATCTCATAAATCAAAGCACA+AGG 0.599543 2_1:+74183566 Msa0224320:CDS
CTTGTTACAGATTGTTGTTG+CGG 0.603792 2_1:+74177929 Msa0224320:five_prime_UTR
ACACCCTGATGTTAAGCCAA+TGG 0.605052 2_1:+74184362 Msa0224320:CDS
GGAAGAGGACCAAGCAAGCG+TGG 0.607947 2_1:+74183396 Msa0224320:CDS
AAGCCATTGGCTTAACATCA+GGG 0.608784 2_1:-74184365 None:intergenic
GATGCGAAATATGATGATGA+TGG 0.610366 2_1:+74179924 Msa0224320:CDS
TGTGTCTTACCTTCATCAGG+AGG 0.622526 2_1:-74183237 None:intergenic
TCAGCCATGTATATAGCTAG+AGG 0.623458 2_1:+74182997 Msa0224320:intron
ATTGGCTTAACATCAGGGTG+TGG 0.628926 2_1:-74184360 None:intergenic
AGAAAGGGAAGAAACATACA+AGG 0.642650 2_1:+74180686 Msa0224320:CDS
TTTATGCAGAAGGGTAACAA+AGG 0.652175 2_1:+74183814 Msa0224320:intron
ATTCTTGATCCCGAATACCG+TGG 0.653339 2_1:-74181020 None:intergenic
TACAAGTACAAGAAGTATCG+AGG 0.660875 2_1:+74180711 Msa0224320:CDS
ATGCGACCAAGCAAGGCCAA+GGG 0.673982 2_1:-74178004 None:intergenic
CTTGGATTGTGATGCAACCG+TGG 0.681407 2_1:-74178066 None:intergenic
GGTTATGAGATTCAACATGA+CGG 0.684432 2_1:+74183588 Msa0224320:CDS
ATTGCACGAGTTAAACAACA+AGG 0.687961 2_1:-74178111 None:intergenic
TTCTCATATAGATTGAAACA+CGG 0.693554 2_1:+74184650 Msa0224320:three_prime_UTR
TGTGGGTGCACACATAGTGA+TGG 0.702135 2_1:+74180095 Msa0224320:CDS
GTTACTATACAAAACAACAG+TGG 0.715204 2_1:-74184536 None:intergenic
TCTCATAAATCAAAGCACAA+GGG 0.729815 2_1:+74183567 Msa0224320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTTTACAAATTAATTAT+TGG + chr2_1:74178446-74178465 Msa0224320:intron 10.0%
!! TAGTTTACAAATTAATTATT+GGG + chr2_1:74178447-74178466 Msa0224320:intron 10.0%
!!! AAATATTTTTAACCTTTAAA+TGG + chr2_1:74179507-74179526 Msa0224320:intron 10.0%
!!! CTCTTATTTATAATTTAATT+AGG - chr2_1:74179630-74179649 None:intergenic 10.0%
!!! TTGTTAGTTAATATTTTATA+TGG + chr2_1:74181748-74181767 Msa0224320:intron 10.0%
!!! TGTTAGTTAATATTTTATAT+GGG + chr2_1:74181749-74181768 Msa0224320:intron 10.0%
!!! ATATTTTATTAAAATTTGTC+AGG - chr2_1:74182118-74182137 None:intergenic 10.0%
!!! TTTTTTCCAAATAATTAATA+CGG - chr2_1:74182607-74182626 None:intergenic 10.0%
!!! AAAATTTGTTTCTTTTATCT+TGG + chr2_1:74178223-74178242 Msa0224320:intron 15.0%
!!! TTTTTTCCTTAATTAGTTTA+TGG + chr2_1:74178255-74178274 Msa0224320:intron 15.0%
!!! AAGAAATAACAAAATTTTCA+AGG + chr2_1:74178831-74178850 Msa0224320:intron 15.0%
!! AAAAAAAAAACACTCTTATT+AGG + chr2_1:74179303-74179322 Msa0224320:intron 15.0%
!! TTAAAGGTTAAATATCTTAA+TGG - chr2_1:74179545-74179564 None:intergenic 15.0%
!! TAAGATATTTAACCTTTAAA+TGG + chr2_1:74179546-74179565 Msa0224320:intron 15.0%
!!! ATTTTAGAAACATATCTTAA+AGG - chr2_1:74179584-74179603 None:intergenic 15.0%
!! TATGAAAAACATAATAGTTA+TGG - chr2_1:74179808-74179827 None:intergenic 15.0%
!!! TAACTATTATGTTTTTCATA+AGG + chr2_1:74179808-74179827 Msa0224320:intron 15.0%
!!! AACTATTATGTTTTTCATAA+GGG + chr2_1:74179809-74179828 Msa0224320:intron 15.0%
!!! AACAAAATTTTTAATTGACT+TGG - chr2_1:74179993-74180012 None:intergenic 15.0%
!! AATATGAAATTAGATAAGAA+AGG + chr2_1:74180670-74180689 Msa0224320:intron 15.0%
!! ATATGAAATTAGATAAGAAA+GGG + chr2_1:74180671-74180690 Msa0224320:intron 15.0%
!! ATATAAGAAAAAATCAATGA+TGG - chr2_1:74181459-74181478 None:intergenic 15.0%
!!! GTTAGTTAATATTTTATATG+GGG + chr2_1:74181750-74181769 Msa0224320:intron 15.0%
!! TACTTGACTAAAAAAAAAAA+TGG + chr2_1:74181913-74181932 Msa0224320:intron 15.0%
!! ACTTGACTAAAAAAAAAAAT+GGG + chr2_1:74181914-74181933 Msa0224320:intron 15.0%
!!! ATTTTTACTAAAAATGGTAA+AGG + chr2_1:74182174-74182193 Msa0224320:intron 15.0%
!! CATGAAAAATAAAATTGAAA+GGG - chr2_1:74182335-74182354 None:intergenic 15.0%
!! TCATGAAAAATAAAATTGAA+AGG - chr2_1:74182336-74182355 None:intergenic 15.0%
!!! TTTTTCCAAATAATTAATAC+GGG - chr2_1:74182606-74182625 None:intergenic 15.0%
!! GTATTAATTATTTGGAAAAA+AGG + chr2_1:74182606-74182625 Msa0224320:intron 15.0%
!!! TTCTTTCTTGAATAATTTTA+CGG + chr2_1:74183680-74183699 Msa0224320:intron 15.0%
!!! TAACTGTTAATTTGATTTTT+AGG + chr2_1:74184555-74184574 Msa0224320:three_prime_UTR 15.0%
!! AGATTACCATAAACTAATTA+AGG - chr2_1:74178264-74178283 None:intergenic 20.0%
!!! TAATTAGTTTATGGTAATCT+TGG + chr2_1:74178264-74178283 Msa0224320:intron 20.0%
!!! TTAGATAAAGAGTGTTAATA+CGG - chr2_1:74179343-74179362 None:intergenic 20.0%
!! AATCATATATCTCCATTTAA+AGG - chr2_1:74179522-74179541 None:intergenic 20.0%
!! AATCAAATATCTCCATTTAA+AGG - chr2_1:74179561-74179580 None:intergenic 20.0%
!!! TTTTTTTTCTTCTTTCATTG+AGG + chr2_1:74179725-74179744 Msa0224320:intron 20.0%
!! TCAAAAATCTCAAATGAATT+AGG - chr2_1:74180486-74180505 None:intergenic 20.0%
!!! ATATTTTCTTTATTTGTTCG+CGG - chr2_1:74180604-74180623 None:intergenic 20.0%
!!! GTTTTATTTTTGTTTTGTGA+TGG - chr2_1:74180744-74180763 None:intergenic 20.0%
!! TTATAGAATAGCAAGATAAT+AGG - chr2_1:74181564-74181583 None:intergenic 20.0%
!! AAGAATGTATAATATATGCA+GGG - chr2_1:74182048-74182067 None:intergenic 20.0%
!! TCTCAGAAAATGTATAAATA+TGG - chr2_1:74182201-74182220 None:intergenic 20.0%
!! AAATGGAAATAAATTCAACA+AGG - chr2_1:74182270-74182289 None:intergenic 20.0%
!! ACATGTATAATCAGAATAAA+TGG - chr2_1:74182287-74182306 None:intergenic 20.0%
!! TTATTCTGATTATACATGTT+TGG + chr2_1:74182288-74182307 Msa0224320:intron 20.0%
!! AAAAATAAAATTGAAAGGGT+TGG - chr2_1:74182331-74182350 None:intergenic 20.0%
!! GAAAATCCATATCTATTTAA+TGG + chr2_1:74182417-74182436 Msa0224320:CDS 20.0%
!! TCTATAAACTATATGACTTA+CGG + chr2_1:74182656-74182675 Msa0224320:intron 20.0%
!! AATAAATTAAGCATCTAATC+AGG - chr2_1:74182842-74182861 None:intergenic 20.0%
!!! TACAATACAAAGAAGTATTA+AGG - chr2_1:74183298-74183317 None:intergenic 20.0%
!! TTTGTTTATGTATCTATGTT+TGG + chr2_1:74183320-74183339 Msa0224320:intron 20.0%
!! TTCTTGAAGGATAATAATTT+AGG + chr2_1:74183459-74183478 Msa0224320:CDS 20.0%
!! GTAAAATTATTCAAGAAAGA+AGG - chr2_1:74183681-74183700 None:intergenic 20.0%
!! ATATCTTAATTCAATTTGTG+AGG + chr2_1:74184279-74184298 Msa0224320:intron 20.0%
! AAGAAAAAAGAAGCTGATAT+TGG + chr2_1:74177816-74177835 Msa0224320:five_prime_UTR 25.0%
! AGAAAAAAGAAGCTGATATT+GGG + chr2_1:74177817-74177836 Msa0224320:five_prime_UTR 25.0%
! TTTGATGTTGTATTTACAGT+TGG + chr2_1:74178346-74178365 Msa0224320:intron 25.0%
! TTGTATTTACAGTTGGAAAT+TGG + chr2_1:74178353-74178372 Msa0224320:intron 25.0%
!!! TCCTAATTTGTTGATTCATT+GGG + chr2_1:74178720-74178739 Msa0224320:intron 25.0%
!!! TAACAAAATTTTCAAGGATG+AGG + chr2_1:74178837-74178856 Msa0224320:intron 25.0%
!!! TGCTGTTTTTTTTAGTTATG+TGG + chr2_1:74179173-74179192 Msa0224320:intron 25.0%
!!! GCTGTTTTTTTTAGTTATGT+GGG + chr2_1:74179174-74179193 Msa0224320:intron 25.0%
!!! CTGTTTTTTTTAGTTATGTG+GGG + chr2_1:74179175-74179194 Msa0224320:intron 25.0%
!!! TGTTTTTTTTAGTTATGTGG+GGG + chr2_1:74179176-74179195 Msa0224320:intron 25.0%
! AGTCGTTGCATTAATAATAT+TGG + chr2_1:74179272-74179291 Msa0224320:intron 25.0%
!! AAACACTCTTATTAGGTTTT+TGG + chr2_1:74179310-74179329 Msa0224320:intron 25.0%
!!! TAGATAAAGAGTGTTAATAC+GGG - chr2_1:74179342-74179361 None:intergenic 25.0%
!!! TGAGCTCCTTATTATTTTAA+CGG + chr2_1:74179438-74179457 Msa0224320:intron 25.0%
! TGAACACCGTTAAAATAATA+AGG - chr2_1:74179447-74179466 None:intergenic 25.0%
! AAAGTAAACGTTTGTGAAAT+CGG + chr2_1:74179683-74179702 Msa0224320:intron 25.0%
!!! TTTAATTGACTTGGTGTATT+TGG - chr2_1:74179984-74180003 None:intergenic 25.0%
! AAATAATTGAATGAGCATGA+AGG + chr2_1:74180060-74180079 Msa0224320:intron 25.0%
!! TTTTAATGTATATGCCCAAT+AGG + chr2_1:74180207-74180226 Msa0224320:intron 25.0%
!!! TTGACGATTAAGGTATTTTA+TGG - chr2_1:74180248-74180267 None:intergenic 25.0%
!! TAGAGAAATTTTATGCATGT+TGG + chr2_1:74180306-74180325 Msa0224320:intron 25.0%
! TTATATAGTAGCTACAATTG+TGG + chr2_1:74180376-74180395 Msa0224320:intron 25.0%
! ACCTAAAACCAATTAATCTA+AGG + chr2_1:74180451-74180470 Msa0224320:intron 25.0%
!!! TCCTTAGATTAATTGGTTTT+AGG - chr2_1:74180455-74180474 None:intergenic 25.0%
! TCAATCATCCTTAGATTAAT+TGG - chr2_1:74180462-74180481 None:intergenic 25.0%
! ATCATTATCAGTAATGCATT+AGG + chr2_1:74180521-74180540 Msa0224320:intron 25.0%
!! AACCAAAATATTTTCATGTC+AGG - chr2_1:74180974-74180993 None:intergenic 25.0%
! GAAAATGATGAATGATTTCA+AGG + chr2_1:74181076-74181095 Msa0224320:CDS 25.0%
!!! TTTTGTTTGCAACAAAATCT+TGG - chr2_1:74181232-74181251 None:intergenic 25.0%
!! GATTTTGTTGCAAACAAAAA+AGG + chr2_1:74181233-74181252 Msa0224320:CDS 25.0%
! TTTCGCAAATAATAAACCAA+GGG - chr2_1:74181365-74181384 None:intergenic 25.0%
!! TTTTCGCAAATAATAAACCA+AGG - chr2_1:74181366-74181385 None:intergenic 25.0%
! TTCTTTGTTACGTAGATATT+TGG + chr2_1:74181413-74181432 Msa0224320:intron 25.0%
! TTTATTTACACTTTGATCAC+AGG + chr2_1:74181520-74181539 Msa0224320:intron 25.0%
! AATTTCTTTGACCATTTATG+TGG + chr2_1:74181670-74181689 Msa0224320:intron 25.0%
! GATAATGCATAATTTATGCA+GGG + chr2_1:74181825-74181844 Msa0224320:intron 25.0%
! ATAATGCATAATTTATGCAG+GGG + chr2_1:74181826-74181845 Msa0224320:intron 25.0%
!!! CTAAAGGTAGATCATTTTTT+TGG + chr2_1:74181943-74181962 Msa0224320:intron 25.0%
!! GAACTCATACATTTTAAATG+CGG + chr2_1:74181985-74182004 Msa0224320:intron 25.0%
! AGAATGTATAATATATGCAG+GGG - chr2_1:74182047-74182066 None:intergenic 25.0%
! GAAGAATGTATAATATATGC+AGG - chr2_1:74182049-74182068 None:intergenic 25.0%
! TAAAATTTGTCAGGAATAGA+AGG - chr2_1:74182109-74182128 None:intergenic 25.0%
!!! TTGAATATTTTTGAGCTCAA+TGG + chr2_1:74182381-74182400 Msa0224320:CDS 25.0%
!!! TGAATATTTTTGAGCTCAAT+GGG + chr2_1:74182382-74182401 Msa0224320:CDS 25.0%
! AAGTCACCATTAAATAGATA+TGG - chr2_1:74182426-74182445 None:intergenic 25.0%
! ATATAATGAAACCTAAGAAG+AGG - chr2_1:74182774-74182793 None:intergenic 25.0%
!!! TCAATAATGCTTATTTTGTG+TGG + chr2_1:74182889-74182908 Msa0224320:intron 25.0%
!!! AACAAGATATTTGGTTTTGA+GGG + chr2_1:74183042-74183061 Msa0224320:CDS 25.0%
! CAAATTTGTCAAAATGTTTG+CGG + chr2_1:74183089-74183108 Msa0224320:CDS 25.0%
!! AATTTAGGTATGTTTTCCAT+TGG + chr2_1:74183474-74183493 Msa0224320:intron 25.0%
!! TACTTGATTTCTTATTTCAC+TGG + chr2_1:74183502-74183521 Msa0224320:intron 25.0%
! GCTTCAAATGTAATAATGTT+AGG - chr2_1:74183874-74183893 None:intergenic 25.0%
!! AGAATCAGTGTTGTTAAATA+TGG + chr2_1:74184008-74184027 Msa0224320:intron 25.0%
!! GAATCAGTGTTGTTAAATAT+GGG + chr2_1:74184009-74184028 Msa0224320:intron 25.0%
!!! GTATTGATTATGAGAACAAT+CGG - chr2_1:74184407-74184426 None:intergenic 25.0%
!!! TTTGAAAAGTTTTAAGCACA+AGG + chr2_1:74184477-74184496 Msa0224320:three_prime_UTR 25.0%
!!! TTGAAAAGTTTTAAGCACAA+GGG + chr2_1:74184478-74184497 Msa0224320:three_prime_UTR 25.0%
!!! TTTGATTTTTAGGATGCATT+TGG + chr2_1:74184565-74184584 Msa0224320:three_prime_UTR 25.0%
! TGTTTCAATCTATATGAGAA+TGG - chr2_1:74184650-74184669 None:intergenic 25.0%
! TTCTCATATAGATTGAAACA+CGG + chr2_1:74184650-74184669 Msa0224320:three_prime_UTR 25.0%
!!! TTTTGTTATATGGAAGATGA+TGG - chr2_1:74184752-74184771 None:intergenic 25.0%
! CATCTTCCATATAACAAAAT+CGG + chr2_1:74184753-74184772 Msa0224320:three_prime_UTR 25.0%
!! GTTTTTAATCACGATTTTGA+GGG - chr2_1:74184781-74184800 None:intergenic 25.0%
!!! TGTTTTTAATCACGATTTTG+AGG - chr2_1:74184782-74184801 None:intergenic 25.0%
GAAAAAAGAAGCTGATATTG+GGG + chr2_1:74177818-74177837 Msa0224320:five_prime_UTR 30.0%
AAAAAAGAAGCTGATATTGG+GGG + chr2_1:74177819-74177838 Msa0224320:five_prime_UTR 30.0%
! TTTTCAACATTTGATCCGTT+TGG + chr2_1:74177899-74177918 Msa0224320:intron 30.0%
TTTCAACATTTGATCCGTTT+GGG + chr2_1:74177900-74177919 Msa0224320:intron 30.0%
GTTTATGGTAATCTTGGAAA+TGG + chr2_1:74178270-74178289 Msa0224320:intron 30.0%
AAATACAACATCAAACAGGT+TGG - chr2_1:74178341-74178360 None:intergenic 30.0%
CTGTAAATACAACATCAAAC+AGG - chr2_1:74178345-74178364 None:intergenic 30.0%
TATGGCAAAAGGTAATGAAT+TGG + chr2_1:74178674-74178693 Msa0224320:intron 30.0%
CAATGAATCAACAAATTAGG+AGG - chr2_1:74178721-74178740 None:intergenic 30.0%
!! CTCCTAATTTGTTGATTCAT+TGG + chr2_1:74178719-74178738 Msa0224320:intron 30.0%
TCCCAATGAATCAACAAATT+AGG - chr2_1:74178724-74178743 None:intergenic 30.0%
AAGGAATAAGAAAGCTCTTA+AGG + chr2_1:74178762-74178781 Msa0224320:intron 30.0%
AGGAATAAGAAAGCTCTTAA+GGG + chr2_1:74178763-74178782 Msa0224320:intron 30.0%
TTAAGGGATTATGGCTTATT+TGG + chr2_1:74178779-74178798 Msa0224320:intron 30.0%
!! TTTTGTTATAGGTATGAAGG+TGG + chr2_1:74179004-74179023 Msa0224320:intron 30.0%
!!! GTTTTTTTTAGTTATGTGGG+GGG + chr2_1:74179177-74179196 Msa0224320:intron 30.0%
!!! TTTTTTTTAGTTATGTGGGG+GGG + chr2_1:74179178-74179197 Msa0224320:intron 30.0%
ATACAAGAAAAACGATAGAG+CGG - chr2_1:74179225-74179244 None:intergenic 30.0%
GTTGCATTAATAATATTGGC+TGG + chr2_1:74179276-74179295 Msa0224320:intron 30.0%
!! AGATAAAGAGTGTTAATACG+GGG - chr2_1:74179341-74179360 None:intergenic 30.0%
AAGAGACTAGACATTGTTTA+TGG + chr2_1:74179645-74179664 Msa0224320:intron 30.0%
AGAGACTAGACATTGTTTAT+GGG + chr2_1:74179646-74179665 Msa0224320:intron 30.0%
TGAAAACTGTTACGAAATTG+AGG - chr2_1:74179857-74179876 None:intergenic 30.0%
AGGAAAAAACTTGACGATTA+AGG - chr2_1:74180258-74180277 None:intergenic 30.0%
!!! GATTTTTGAAACAAGTCAAG+TGG + chr2_1:74180497-74180516 Msa0224320:intron 30.0%
AGTAATGCATTAGGAAATAG+TGG + chr2_1:74180530-74180549 Msa0224320:intron 30.0%
!!! TTTTTGTTTTGTGATGGTCT+TGG - chr2_1:74180738-74180757 None:intergenic 30.0%
!!! TTGCTTTTTGTCTTTGCTTT+TGG - chr2_1:74180769-74180788 None:intergenic 30.0%
CACAAGAAAAAATCCAAACA+AGG - chr2_1:74180870-74180889 None:intergenic 30.0%
! TTTTCAATTACTGCCTTGAT+TGG + chr2_1:74180891-74180910 Msa0224320:intron 30.0%
!! TAGTTTTTAGATGCCAATCA+AGG - chr2_1:74180907-74180926 None:intergenic 30.0%
TACGCAACAATCTTCTAAAT+GGG - chr2_1:74180933-74180952 None:intergenic 30.0%
ATACGCAACAATCTTCTAAA+TGG - chr2_1:74180934-74180953 None:intergenic 30.0%
! CACCTGACATGAAAATATTT+TGG + chr2_1:74180969-74180988 Msa0224320:intron 30.0%
AGAAGGAGATACTATTACTT+TGG + chr2_1:74181043-74181062 Msa0224320:CDS 30.0%
AAATGTATTTGCATTTGTCC+TGG + chr2_1:74181185-74181204 Msa0224320:intron 30.0%
AATTGTTGCTAGTAACTTCA+AGG + chr2_1:74181387-74181406 Msa0224320:intron 30.0%
TTTGTTACGTAGATATTTGG+AGG + chr2_1:74181416-74181435 Msa0224320:intron 30.0%
!!! ATTGGGGAGCTATTTTTTTA+GGG + chr2_1:74181697-74181716 Msa0224320:intron 30.0%
TTATATGGGGCTATCTAATA+TGG + chr2_1:74181763-74181782 Msa0224320:intron 30.0%
TATATGGGGCTATCTAATAT+GGG + chr2_1:74181764-74181783 Msa0224320:intron 30.0%
GGATAATGCATAATTTATGC+AGG + chr2_1:74181824-74181843 Msa0224320:intron 30.0%
TACCTTAAAGGTGAATATGT+GGG - chr2_1:74181873-74181892 None:intergenic 30.0%
TTACCTTAAAGGTGAATATG+TGG - chr2_1:74181874-74181893 None:intergenic 30.0%
GCTAGAGAAATTTACCTTAA+AGG - chr2_1:74181885-74181904 None:intergenic 30.0%
AAAAAATGGGTCAGATCTAA+AGG + chr2_1:74181927-74181946 Msa0224320:intron 30.0%
!!! TTATTTTTGCCTCATGTGTA+CGG + chr2_1:74182232-74182251 Msa0224320:intron 30.0%
! AGATATGGATTTTCTTCTGA+AGG - chr2_1:74182411-74182430 None:intergenic 30.0%
! TCTTTCTTTATTAGCCTGTT+AGG + chr2_1:74182529-74182548 Msa0224320:intron 30.0%
TGGTAAAAAGAAAACCTAAC+AGG - chr2_1:74182546-74182565 None:intergenic 30.0%
GAAGTCCCGTATTAATTATT+TGG + chr2_1:74182598-74182617 Msa0224320:intron 30.0%
TTGAGCAACATATAAATGAG+AGG + chr2_1:74182632-74182651 Msa0224320:intron 30.0%
!! TCACTTGTGTAATTGCTTTT+GGG + chr2_1:74182703-74182722 Msa0224320:intron 30.0%
!!! TAATGCTTATTTTGTGTGGT+TGG + chr2_1:74182893-74182912 Msa0224320:intron 30.0%
TAACTAAGTGAAGTGAAAAG+AGG - chr2_1:74182939-74182958 None:intergenic 30.0%
ATTTCCTCTAGCTATATACA+TGG - chr2_1:74183004-74183023 None:intergenic 30.0%
! AAGAGCATGAACAAGATATT+TGG + chr2_1:74183033-74183052 Msa0224320:CDS 30.0%
!!! GAACAAGATATTTGGTTTTG+AGG + chr2_1:74183041-74183060 Msa0224320:CDS 30.0%
AGTATTCAACTGTTTACCTT+TGG + chr2_1:74183113-74183132 Msa0224320:CDS 30.0%
CTCAAATCCGATCAATTAAT+CGG + chr2_1:74183205-74183224 Msa0224320:CDS 30.0%
CACAAAACCGATTAATTGAT+CGG - chr2_1:74183215-74183234 None:intergenic 30.0%
TATCTATGTTTGGTATGTGT+AGG + chr2_1:74183330-74183349 Msa0224320:intron 30.0%
ATCTATGTTTGGTATGTGTA+GGG + chr2_1:74183331-74183350 Msa0224320:intron 30.0%
TGTTACAAAAAGGTTCTTGA+AGG + chr2_1:74183446-74183465 Msa0224320:CDS 30.0%
GAAATCAAGTATCAAACCAA+TGG - chr2_1:74183493-74183512 None:intergenic 30.0%
ATCTCATAAATCAAAGCACA+AGG + chr2_1:74183566-74183585 Msa0224320:CDS 30.0%
TCTCATAAATCAAAGCACAA+GGG + chr2_1:74183567-74183586 Msa0224320:CDS 30.0%
ACATTAATATCATAAGCGTG+TGG - chr2_1:74183739-74183758 None:intergenic 30.0%
TCAGGATATGTATACTTCAT+GGG - chr2_1:74183783-74183802 None:intergenic 30.0%
ATCAGGATATGTATACTTCA+TGG - chr2_1:74183784-74183803 None:intergenic 30.0%
GCATAAAACAATGGAAAATC+AGG - chr2_1:74183801-74183820 None:intergenic 30.0%
!! TTTCCATTGTTTTATGCAGA+AGG + chr2_1:74183804-74183823 Msa0224320:intron 30.0%
!! TTCCATTGTTTTATGCAGAA+GGG + chr2_1:74183805-74183824 Msa0224320:intron 30.0%
! ATAATGTTAGGTTGCAAATC+AGG - chr2_1:74183862-74183881 None:intergenic 30.0%
! CATTATTACATTTGAAGCAG+TGG + chr2_1:74183876-74183895 Msa0224320:CDS 30.0%
TATTGCCAATTTGTGAATGA+TGG + chr2_1:74184090-74184109 Msa0224320:intron 30.0%
TTCAAAACAGCATCAATCAT+TGG - chr2_1:74184463-74184482 None:intergenic 30.0%
TTAAGCACAAGGGAAATATT+TGG + chr2_1:74184488-74184507 Msa0224320:three_prime_UTR 30.0%
ATATTTGGCTAGAGAAGATT+TGG + chr2_1:74184503-74184522 Msa0224320:three_prime_UTR 30.0%
GTTACTATACAAAACAACAG+TGG - chr2_1:74184539-74184558 None:intergenic 30.0%
!! ATATGGAAGATGATGGAATT+TGG - chr2_1:74184745-74184764 None:intergenic 30.0%
! CTTGTTACAGATTGTTGTTG+CGG + chr2_1:74177929-74177948 Msa0224320:five_prime_UTR 35.0%
ATTGCACGAGTTAAACAACA+AGG - chr2_1:74178114-74178133 None:intergenic 35.0%
! CTACCTAAACCTTGTTTCAA+AGG + chr2_1:74178149-74178168 Msa0224320:CDS 35.0%
!! TCACCTTTGAAACAAGGTTT+AGG - chr2_1:74178155-74178174 None:intergenic 35.0%
!! ATTTGCTCACCTTTGAAACA+AGG - chr2_1:74178161-74178180 None:intergenic 35.0%
GCAAAAGGTAATGAATTGGA+TGG + chr2_1:74178678-74178697 Msa0224320:intron 35.0%
!! TGTTGATTCATTGGGATTGT+TGG + chr2_1:74178728-74178747 Msa0224320:intron 35.0%
! GTTGATTCATTGGGATTGTT+GGG + chr2_1:74178729-74178748 Msa0224320:intron 35.0%
TTGATTCATTGGGATTGTTG+GGG + chr2_1:74178730-74178749 Msa0224320:intron 35.0%
AGAAAGCTCTTAAGGGATTA+TGG + chr2_1:74178770-74178789 Msa0224320:intron 35.0%
TTATTTGGCATACTACTGTG+TGG + chr2_1:74178794-74178813 Msa0224320:intron 35.0%
TATTTGGCATACTACTGTGT+GGG + chr2_1:74178795-74178814 Msa0224320:intron 35.0%
!! ATTTTCAAGGATGAGGTTTG+TGG + chr2_1:74178844-74178863 Msa0224320:intron 35.0%
TTGTGGAATTGAGGAAATTG+TGG + chr2_1:74178861-74178880 Msa0224320:intron 35.0%
AGAAGATCAAAATGCTCTCA+TGG + chr2_1:74178884-74178903 Msa0224320:intron 35.0%
CATTCGTAGAACATACAAGT+AGG - chr2_1:74178937-74178956 None:intergenic 35.0%
CTACTTGTATGTTCTACGAA+TGG + chr2_1:74178935-74178954 Msa0224320:intron 35.0%
CATACCTATAACAAAACCGA+TGG - chr2_1:74179000-74179019 None:intergenic 35.0%
!!! CGGTTTTGTTATAGGTATGA+AGG + chr2_1:74179001-74179020 Msa0224320:intron 35.0%
!! TTCTGCTGTGTTTGTTTTTC+TGG + chr2_1:74179069-74179088 Msa0224320:intron 35.0%
!! TCTGCTGTGTTTGTTTTTCT+GGG + chr2_1:74179070-74179089 Msa0224320:intron 35.0%
!!! TTTTTTTCTAGGTGTGTGCT+GGG + chr2_1:74179107-74179126 Msa0224320:intron 35.0%
!! TGTAAAGCCCACTTAGTTTT+TGG + chr2_1:74179135-74179154 Msa0224320:intron 35.0%
! ACACTCTTTATCTAAAGCCT+TGG + chr2_1:74179348-74179367 Msa0224320:intron 35.0%
ACTAGACATTGTTTATGGGA+AGG + chr2_1:74179650-74179669 Msa0224320:intron 35.0%
GGGAGTAATATTTATATGCG+TGG + chr2_1:74179829-74179848 Msa0224320:intron 35.0%
! GATGCGAAATATGATGATGA+TGG + chr2_1:74179924-74179943 Msa0224320:CDS 35.0%
TGAAGGAACGTTGTTAATTG+TGG + chr2_1:74180077-74180096 Msa0224320:intron 35.0%
GAAGGAACGTTGTTAATTGT+GGG + chr2_1:74180078-74180097 Msa0224320:intron 35.0%
CACATAGTGATGGTTGTAAT+AGG + chr2_1:74180105-74180124 Msa0224320:CDS 35.0%
!! ACATGAGAGTACTTCCTATT+GGG - chr2_1:74180224-74180243 None:intergenic 35.0%
!! AACATGAGAGTACTTCCTAT+TGG - chr2_1:74180225-74180244 None:intergenic 35.0%
TACTTATGGAAAGGTTTGTG+AGG - chr2_1:74180278-74180297 None:intergenic 35.0%
ACTCTCAAGTACTTATGGAA+AGG - chr2_1:74180287-74180306 None:intergenic 35.0%
TCTCTACTCTCAAGTACTTA+TGG - chr2_1:74180292-74180311 None:intergenic 35.0%
ATAGTAGCTACAATTGTGGT+TGG + chr2_1:74180380-74180399 Msa0224320:intron 35.0%
TAAGCTTATACCATGCCTAA+TGG - chr2_1:74180422-74180441 None:intergenic 35.0%
AGAAAGGGAAGAAACATACA+AGG + chr2_1:74180686-74180705 Msa0224320:CDS 35.0%
!! TACAAGTACAAGAAGTATCG+AGG + chr2_1:74180711-74180730 Msa0224320:CDS 35.0%
AGCAAAGACAAAAAGCAACA+TGG + chr2_1:74180771-74180790 Msa0224320:CDS 35.0%
TAAGAGATACATACAAGTGC+TGG - chr2_1:74180827-74180846 None:intergenic 35.0%
ACGCAACAATCTTCTAAATG+GGG - chr2_1:74180932-74180951 None:intergenic 35.0%
TATTCGGGATCAAGAATAGA+AGG + chr2_1:74181026-74181045 Msa0224320:CDS 35.0%
! TTGTCCTGGTTCATTGTTTT+AGG + chr2_1:74181199-74181218 Msa0224320:intron 35.0%
CATACCTAAAACAATGAACC+AGG - chr2_1:74181206-74181225 None:intergenic 35.0%
ACAGTTATGTCAACAAGAGA+AGG - chr2_1:74181273-74181292 None:intergenic 35.0%
! ACAGTAACATGTTTTCCATG+AGG - chr2_1:74181297-74181316 None:intergenic 35.0%
GGAAAACATGTTACTGTTTG+TGG + chr2_1:74181300-74181319 Msa0224320:CDS 35.0%
TACGTAGATATTTGGAGGAT+AGG + chr2_1:74181421-74181440 Msa0224320:intron 35.0%
ACGTAGATATTTGGAGGATA+GGG + chr2_1:74181422-74181441 Msa0224320:intron 35.0%
TTCTTTGACCATTTATGTGG+AGG + chr2_1:74181673-74181692 Msa0224320:intron 35.0%
TCTTTGACCATTTATGTGGA+GGG + chr2_1:74181674-74181693 Msa0224320:intron 35.0%
!!! GATTGGGGAGCTATTTTTTT+AGG + chr2_1:74181696-74181715 Msa0224320:intron 35.0%
!!! TTGGGGAGCTATTTTTTTAG+GGG + chr2_1:74181698-74181717 Msa0224320:intron 35.0%
ACCTTAAAGGTGAATATGTG+GGG - chr2_1:74181872-74181891 None:intergenic 35.0%
!! TTTTTAGTCAAGTAGCCTAG+CGG - chr2_1:74181907-74181926 None:intergenic 35.0%
AATGGTGACTTTGTAGATAG+AGG + chr2_1:74182435-74182454 Msa0224320:CDS 35.0%
! AGATAGAGGATCATTTTCAG+TGG + chr2_1:74182449-74182468 Msa0224320:CDS 35.0%
GGCTAATAAAGAAAGAGCTA+GGG - chr2_1:74182525-74182544 None:intergenic 35.0%
AGGCTAATAAAGAAAGAGCT+AGG - chr2_1:74182526-74182545 None:intergenic 35.0%
! CTCACTTGTGTAATTGCTTT+TGG + chr2_1:74182702-74182721 Msa0224320:intron 35.0%
AAACCTAAGAAGAGGTTGTT+TGG - chr2_1:74182766-74182785 None:intergenic 35.0%
TAAGCATCTAATCAGGTGAT+AGG - chr2_1:74182835-74182854 None:intergenic 35.0%
TTTCACTTCACTTAGTTAGC+TGG + chr2_1:74182941-74182960 Msa0224320:intron 35.0%
TTCACTTCACTTAGTTAGCT+GGG + chr2_1:74182942-74182961 Msa0224320:intron 35.0%
TTGTTTATCACATGAGCCAA+AGG - chr2_1:74183132-74183151 None:intergenic 35.0%
TTATGTGTCTTACCTTCATC+AGG - chr2_1:74183243-74183262 None:intergenic 35.0%
TTGGTGAGGATGTTACAAAA+AGG + chr2_1:74183436-74183455 Msa0224320:CDS 35.0%
GGTTATGAGATTCAACATGA+CGG + chr2_1:74183588-74183607 Msa0224320:CDS 35.0%
GTTACCTGATCACAGTAATT+TGG - chr2_1:74183639-74183658 None:intergenic 35.0%
AGGTTGTAACAAAAGAGACA+TGG - chr2_1:74183661-74183680 None:intergenic 35.0%
! AATAATTTTACGGCATGTGC+AGG + chr2_1:74183690-74183709 Msa0224320:intron 35.0%
TACCCTTCTGCATAAAACAA+TGG - chr2_1:74183810-74183829 None:intergenic 35.0%
TTTATGCAGAAGGGTAACAA+AGG + chr2_1:74183814-74183833 Msa0224320:intron 35.0%
AGGTGCTTCAAATCGAATAA+AGG - chr2_1:74183842-74183861 None:intergenic 35.0%
ATATCCACCATAAAACGCTT+TGG - chr2_1:74184121-74184140 None:intergenic 35.0%
!!! AAAGCGTTTTATGGTGGATA+TGG + chr2_1:74184120-74184139 Msa0224320:intron 35.0%
TTCAGTGTTATCAATTGCAG+TGG - chr2_1:74184187-74184206 None:intergenic 35.0%
TCAATTTGTGAGGTTATGTC+TGG + chr2_1:74184289-74184308 Msa0224320:intron 35.0%
! GTGTTGACATACTTTCTTCT+TGG + chr2_1:74184311-74184330 Msa0224320:intron 35.0%
GACATACTTTCTTCTTGGAT+TGG + chr2_1:74184316-74184335 Msa0224320:intron 35.0%
AAGTTGTTTGCATAAGCCAT+TGG - chr2_1:74184381-74184400 None:intergenic 35.0%
TGCTTACTTTACAGCGTATT+TGG + chr2_1:74184595-74184614 Msa0224320:three_prime_UTR 35.0%
! CTCAAGAAGAACTTTTAACG+TGG - chr2_1:74184677-74184696 None:intergenic 35.0%
!! AGGGAACCGATTTTGTTATA+TGG - chr2_1:74184762-74184781 None:intergenic 35.0%
!! TCGTGATTTTGTTTGCGTTC+CGG + chr2_1:74177864-74177883 Msa0224320:intron 40.0%
TTGAAAACCAACAGCAAACC+CGG - chr2_1:74177886-74177905 None:intergenic 40.0%
AGCAAACATCTTGGAAACCT+TGG - chr2_1:74178087-74178106 None:intergenic 40.0%
GGTGAGCAAATCTCAATCAA+AGG + chr2_1:74178170-74178189 Msa0224320:intron 40.0%
! CAAACAGGTTGGAAATTCGA+AGG - chr2_1:74178330-74178349 None:intergenic 40.0%
! TAAGGGTGCGTTTGTTTCAA+GGG - chr2_1:74178586-74178605 None:intergenic 40.0%
! TTAAGGGTGCGTTTGTTTCA+AGG - chr2_1:74178587-74178606 None:intergenic 40.0%
TTGAAACAAACGCACCCTTA+AGG + chr2_1:74178586-74178605 Msa0224320:intron 40.0%
! ACATCTTTTCCTTCATTGCG+AGG + chr2_1:74178639-74178658 Msa0224320:intron 40.0%
! CACTAGCTTGATATGGCAAA+AGG + chr2_1:74178663-74178682 Msa0224320:intron 40.0%
TCAAAATGCTCTCATGGAGA+TGG + chr2_1:74178890-74178909 Msa0224320:intron 40.0%
GTATGTTCTACGAATGGTGT+TGG + chr2_1:74178941-74178960 Msa0224320:intron 40.0%
CACACCTAGAAAAAAACCGA+TGG - chr2_1:74179103-74179122 None:intergenic 40.0%
!!! GTTTTTTTCTAGGTGTGTGC+TGG + chr2_1:74179106-74179125 Msa0224320:intron 40.0%
! CTCTTTATCTAAAGCCTTGG+AGG + chr2_1:74179351-74179370 Msa0224320:intron 40.0%
GAAACCAACGAGAGAGAAAA+AGG - chr2_1:74179786-74179805 None:intergenic 40.0%
GTGATGGTTGTAATAGGATC+TGG + chr2_1:74180111-74180130 Msa0224320:CDS 40.0%
GCTCATTCACACTGGATTAA+AGG + chr2_1:74180159-74180178 Msa0224320:CDS 40.0%
TTGCTAGTTGTTGCTCCATT+AGG + chr2_1:74180404-74180423 Msa0224320:intron 40.0%
!! TACATACAAGTGCTGGAGTT+GGG - chr2_1:74180820-74180839 None:intergenic 40.0%
!! ATACATACAAGTGCTGGAGT+TGG - chr2_1:74180821-74180840 None:intergenic 40.0%
!! TTTCAAGGAACAGAAGTGCT+TGG + chr2_1:74181091-74181110 Msa0224320:CDS 40.0%
!! AACAGAAGTGCTTGGATAGA+GGG + chr2_1:74181099-74181118 Msa0224320:CDS 40.0%
GTTGACATAACTGTTCCTCA+TGG + chr2_1:74181279-74181298 Msa0224320:CDS 40.0%
GTATATGACAATTGCTCCCT+TGG + chr2_1:74181346-74181365 Msa0224320:intron 40.0%
TGTTGCTAGTAACTTCAAGG+TGG + chr2_1:74181390-74181409 Msa0224320:intron 40.0%
ACCATTTATGTGGAGGGATT+GGG + chr2_1:74181680-74181699 Msa0224320:intron 40.0%
!!! GGAGCTATTTTTTTAGGGGA+GGG + chr2_1:74181702-74181721 Msa0224320:intron 40.0%
ACCCCACATATTCACCTTTA+AGG + chr2_1:74181868-74181887 Msa0224320:intron 40.0%
ATGTATGAGTTCCAGCAACT+AGG - chr2_1:74181977-74181996 None:intergenic 40.0%
TGTATAATATATGCAGGGGC+CGG - chr2_1:74182043-74182062 None:intergenic 40.0%
TTAAATCCTCCGTACACATG+AGG - chr2_1:74182244-74182263 None:intergenic 40.0%
AAGATCATAGAACTGCATGC+AGG - chr2_1:74182361-74182380 None:intergenic 40.0%
TTTAAGTGCATGTCTCCATC+TGG + chr2_1:74182495-74182514 Msa0224320:CDS 40.0%
CACTTGCACAACACATTCTT+TGG - chr2_1:74182566-74182585 None:intergenic 40.0%
!! GTAATTGCTTTTGGGCAATG+CGG + chr2_1:74182711-74182730 Msa0224320:intron 40.0%
TGACCAAACAACCTCTTCTT+AGG + chr2_1:74182760-74182779 Msa0224320:intron 40.0%
TCAGCCATGTATATAGCTAG+AGG + chr2_1:74182997-74183016 Msa0224320:intron 40.0%
!!! GATATTTGGTTTTGAGGGTG+AGG + chr2_1:74183047-74183066 Msa0224320:CDS 40.0%
! AAGAAAGTTTTCGTCGTCCA+TGG + chr2_1:74183150-74183169 Msa0224320:CDS 40.0%
!!! GAGGCCTTTTTAGTGTTGAT+GGG + chr2_1:74183172-74183191 Msa0224320:CDS 40.0%
!!! AGGCCTTTTTAGTGTTGATG+GGG + chr2_1:74183173-74183192 Msa0224320:CDS 40.0%
TGACCCCATCAACACTAAAA+AGG - chr2_1:74183179-74183198 None:intergenic 40.0%
TGCTCCAAATTACTGTGATC+AGG + chr2_1:74183632-74183651 Msa0224320:CDS 40.0%
AATATCATAAGCGTGTGGCA+CGG - chr2_1:74183734-74183753 None:intergenic 40.0%
TGGGCTATTGAAACACCATA+TGG + chr2_1:74184028-74184047 Msa0224320:intron 40.0%
GCTATTGAAACACCATATGG+CGG + chr2_1:74184031-74184050 Msa0224320:intron 40.0%
TGCCAATTTGTGAATGATGG+TGG + chr2_1:74184093-74184112 Msa0224320:intron 40.0%
GGCTTAGAATGTCGAATTCT+TGG + chr2_1:74184144-74184163 Msa0224320:intron 40.0%
AATGTCGAATTCTTGGCTTC+TGG + chr2_1:74184151-74184170 Msa0224320:intron 40.0%
!! AAGCCATTGGCTTAACATCA+GGG - chr2_1:74184368-74184387 None:intergenic 40.0%
!! TAAGCCATTGGCTTAACATC+AGG - chr2_1:74184369-74184388 None:intergenic 40.0%
CAAAATCACGACTGTCTCGA+CGG - chr2_1:74177855-74177874 None:intergenic 45.0%
!! CGTGATTTTGTTTGCGTTCC+GGG + chr2_1:74177865-74177884 Msa0224320:intron 45.0%
CAACATTTGATCCGTTTGGG+TGG + chr2_1:74177903-74177922 Msa0224320:intron 45.0%
GTAACAAGATGCCACCCAAA+CGG - chr2_1:74177917-74177936 None:intergenic 45.0%
CCAAGTTGCTATGTCTTCTC+CGG + chr2_1:74177965-74177984 Msa0224320:exon 45.0%
CAAGGCTTGAGCAAACATCT+TGG - chr2_1:74178096-74178115 None:intergenic 45.0%
ACAAACGCACCCTTAAGGAT+TGG + chr2_1:74178591-74178610 Msa0224320:intron 45.0%
TCCTCTCGACCAATCCTTAA+GGG - chr2_1:74178603-74178622 None:intergenic 45.0%
TTCCTCTCGACCAATCCTTA+AGG - chr2_1:74178604-74178623 None:intergenic 45.0%
!! TTAAGGATTGGTCGAGAGGA+AGG + chr2_1:74178603-74178622 Msa0224320:intron 45.0%
TCATTGGGATTGTTGGGGTA+TGG + chr2_1:74178735-74178754 Msa0224320:intron 45.0%
ATACTACTGTGTGGGTGGTA+TGG + chr2_1:74178803-74178822 Msa0224320:intron 45.0%
GGATGAGGTTTGTGGAATTG+AGG + chr2_1:74178852-74178871 Msa0224320:intron 45.0%
TAACGGCGAAGGCAATCATT+CGG - chr2_1:74178970-74178989 None:intergenic 45.0%
!!! AGGGCCATCGGTTTTGTTAT+AGG + chr2_1:74178993-74179012 Msa0224320:intron 45.0%
!! TGTTTGTTTTTCTGGGCTCC+TGG + chr2_1:74179077-74179096 Msa0224320:intron 45.0%
CTAGAAAAAAACCGATGGCC+AGG - chr2_1:74179098-74179117 None:intergenic 45.0%
!!! CTGGCCATCGGTTTTTTTCT+AGG + chr2_1:74179096-74179115 Msa0224320:intron 45.0%
CCAGCTGCCAAAAACTAAGT+GGG - chr2_1:74179145-74179164 None:intergenic 45.0%
ACCAGCTGCCAAAAACTAAG+TGG - chr2_1:74179146-74179165 None:intergenic 45.0%
ATAGAGCGGACGACTTACAA+AGG - chr2_1:74179211-74179230 None:intergenic 45.0%
! TATCTAAAGCCTTGGAGGCT+TGG + chr2_1:74179356-74179375 Msa0224320:intron 45.0%
CACATTGGGCTCGTTTGTTT+GGG + chr2_1:74179381-74179400 Msa0224320:intron 45.0%
! TGCTCCTTTTTCTCTCTCGT+TGG + chr2_1:74179779-74179798 Msa0224320:intron 45.0%
GATGGTCGCATAAATCGAAC+AGG + chr2_1:74179942-74179961 Msa0224320:CDS 45.0%
!! AGGATCTGGAGTGTTGTCAT+TGG + chr2_1:74180125-74180144 Msa0224320:CDS 45.0%
!! TGGAGTGTTGTCATTGGCAT+TGG + chr2_1:74180131-74180150 Msa0224320:CDS 45.0%
TGGCTATTGCTCATTCACAC+TGG + chr2_1:74180151-74180170 Msa0224320:CDS 45.0%
AGTTGTTGCTCCATTAGGCA+TGG + chr2_1:74180409-74180428 Msa0224320:intron 45.0%
ATTCTTGATCCCGAATACCG+TGG - chr2_1:74181023-74181042 None:intergenic 45.0%
!! GAACAGAAGTGCTTGGATAG+AGG + chr2_1:74181098-74181117 Msa0224320:CDS 45.0%
GATGTGCATGGTCAGGTAAT+TGG + chr2_1:74181324-74181343 Msa0224320:intron 45.0%
GACCATTTATGTGGAGGGAT+TGG + chr2_1:74181679-74181698 Msa0224320:intron 45.0%
CCATTTATGTGGAGGGATTG+GGG + chr2_1:74181681-74181700 Msa0224320:intron 45.0%
!!! GGGAGCTATTTTTTTAGGGG+AGG + chr2_1:74181701-74181720 Msa0224320:intron 45.0%
TGAGCTTAGCTCACTTGGTA+AGG + chr2_1:74181802-74181821 Msa0224320:intron 45.0%
GAGCTTAGCTCACTTGGTAA+GGG + chr2_1:74181803-74181822 Msa0224320:intron 45.0%
TGCATAATTTATGCAGGGGC+CGG + chr2_1:74181830-74181849 Msa0224320:intron 45.0%
AAGGTGAATATGTGGGGTGT+CGG - chr2_1:74181866-74181885 None:intergenic 45.0%
GGTAAATTTCTCTAGCCGCT+AGG + chr2_1:74181889-74181908 Msa0224320:intron 45.0%
TGGTCAAGTATCCTAGTTGC+TGG + chr2_1:74181963-74181982 Msa0224320:intron 45.0%
GTATAATATATGCAGGGGCC+GGG - chr2_1:74182042-74182061 None:intergenic 45.0%
! GTGAGTCTAGCTCAGTTGAA+AGG - chr2_1:74182071-74182090 None:intergenic 45.0%
! TTTTTGCCTCATGTGTACGG+AGG + chr2_1:74182235-74182254 Msa0224320:intron 45.0%
AAGAGCTAGGGTTTACCAGA+TGG - chr2_1:74182513-74182532 None:intergenic 45.0%
AAGAGGTTGTTTGGTCACGA+GGG - chr2_1:74182757-74182776 None:intergenic 45.0%
! AAAGTTTTCGTCGTCCATGG+AGG + chr2_1:74183153-74183172 Msa0224320:CDS 45.0%
CAACACTAAAAAGGCCTCCA+TGG - chr2_1:74183170-74183189 None:intergenic 45.0%
!! GGAGGCCTTTTTAGTGTTGA+TGG + chr2_1:74183171-74183190 Msa0224320:CDS 45.0%
! TTTTGTGAGCCTCCTGATGA+AGG + chr2_1:74183228-74183247 Msa0224320:CDS 45.0%
TGTGTCTTACCTTCATCAGG+AGG - chr2_1:74183240-74183259 None:intergenic 45.0%
!! GGTTGATGCATGACTTGCTA+TGG + chr2_1:74183352-74183371 Msa0224320:CDS 45.0%
!!! TGGGTGCTTTTGTTTTGGTG+AGG + chr2_1:74183422-74183441 Msa0224320:CDS 45.0%
!! AAACACCATATGGCGGATTG+TGG + chr2_1:74184038-74184057 Msa0224320:intron 45.0%
CGCCACCATCATTCACAAAT+TGG - chr2_1:74184098-74184117 None:intergenic 45.0%
!!! GCGTTTTATGGTGGATATGG+TGG + chr2_1:74184123-74184142 Msa0224320:intron 45.0%
! ATTGGCTTAACATCAGGGTG+TGG - chr2_1:74184363-74184382 None:intergenic 45.0%
ACACCCTGATGTTAAGCCAA+TGG + chr2_1:74184362-74184381 Msa0224320:CDS 45.0%
TCAATCATTGGCAGCTCTTC+TGG - chr2_1:74184451-74184470 None:intergenic 45.0%
!! TAAAATAAAAATATATGATT+TGG + chr2_1:74179598-74179617 Msa0224320:intron 5.0%
!!! AAATTTATTTTTACTAAAAA+TGG + chr2_1:74182168-74182187 Msa0224320:intron 5.0%
!!! ATATTATTTTTGATATATTA+TGG + chr2_1:74182790-74182809 Msa0224320:intron 5.0%
!! ATTATAATAAAAAATGAAAA+AGG + chr2_1:74183982-74184001 Msa0224320:intron 5.0%
CCGGAGAAGACATAGCAACT+TGG - chr2_1:74177968-74177987 None:intergenic 50.0%
! CTGCGAGTTGAGACAGACTT+TGG - chr2_1:74178035-74178054 None:intergenic 50.0%
CTTGGATTGTGATGCAACCG+TGG - chr2_1:74178069-74178088 None:intergenic 50.0%
CACGGTTGCATCACAATCCA+AGG + chr2_1:74178067-74178086 Msa0224320:CDS 50.0%
GGTTTAGGTAGCTGTGATGC+AGG - chr2_1:74178140-74178159 None:intergenic 50.0%
!! ACCCTTAAGGATTGGTCGAG+AGG + chr2_1:74178599-74178618 Msa0224320:intron 50.0%
AGCTAGTGACCTCGCAATGA+AGG - chr2_1:74178651-74178670 None:intergenic 50.0%
! GCGAGGTCACTAGCTTGATA+TGG + chr2_1:74178656-74178675 Msa0224320:intron 50.0%
TTGGGATTGTTGGGGTATGG+AGG + chr2_1:74178738-74178757 Msa0224320:intron 50.0%
TGGGATTGTTGGGGTATGGA+GGG + chr2_1:74178739-74178758 Msa0224320:intron 50.0%
ATTGTTGGGGTATGGAGGGA+AGG + chr2_1:74178743-74178762 Msa0224320:intron 50.0%
TTGGCATACTACTGTGTGGG+TGG + chr2_1:74178798-74178817 Msa0224320:intron 50.0%
AACGGCGAAGGCAATCATTC+GGG - chr2_1:74178969-74178988 None:intergenic 50.0%
GAATGATTGCCTTCGCCGTT+AGG + chr2_1:74178969-74178988 Msa0224320:intron 50.0%
ATTGCCTTCGCCGTTAGGAA+GGG + chr2_1:74178974-74178993 Msa0224320:intron 50.0%
AAACCGATGGCCCTTCCTAA+CGG - chr2_1:74178987-74179006 None:intergenic 50.0%
!!! CCCACTTAGTTTTTGGCAGC+TGG + chr2_1:74179142-74179161 Msa0224320:intron 50.0%
!! TTGGAGGCTTGGTGCACATT+GGG + chr2_1:74179367-74179386 Msa0224320:intron 50.0%
GCACATTGGGCTCGTTTGTT+TGG + chr2_1:74179380-74179399 Msa0224320:intron 50.0%
TGTGGGTGCACACATAGTGA+TGG + chr2_1:74180095-74180114 Msa0224320:CDS 50.0%
TTGTTCGCGGAATGCGTAGA+TGG - chr2_1:74180591-74180610 None:intergenic 50.0%
CAGCTGCTTGCAACCTTGTT+TGG + chr2_1:74180854-74180873 Msa0224320:intron 50.0%
CGCTAATAGATGTCGAGCCA+CGG + chr2_1:74181003-74181022 Msa0224320:intron 50.0%
AGATGTCGAGCCACGGTATT+CGG + chr2_1:74181010-74181029 Msa0224320:intron 50.0%
ACTGTTTGTGGCGATGTGCA+TGG + chr2_1:74181312-74181331 Msa0224320:CDS 50.0%
CCCCAATCCCTCCACATAAA+TGG - chr2_1:74181684-74181703 None:intergenic 50.0%
GCATAATTTATGCAGGGGCC+GGG + chr2_1:74181831-74181850 Msa0224320:intron 50.0%
CATAATTTATGCAGGGGCCG+GGG + chr2_1:74181832-74181851 Msa0224320:intron 50.0%
! AGGTGAATATGTGGGGTGTC+GGG - chr2_1:74181865-74181884 None:intergenic 50.0%
AGTGTCCGGAATTCGAACTC+CGG + chr2_1:74182016-74182035 Msa0224320:intron 50.0%
GAGCTAGACTCACGAAGACA+AGG + chr2_1:74182078-74182097 Msa0224320:intron 50.0%
AGAGGTTGTTTGGTCACGAG+GGG - chr2_1:74182756-74182775 None:intergenic 50.0%
GAAGAGGTTGTTTGGTCACG+AGG - chr2_1:74182758-74182777 None:intergenic 50.0%
AGTGATCCACAATCTCTCCC+TGG + chr2_1:74183375-74183394 Msa0224320:CDS 50.0%
!! GGCGATGGGTGCTTTTGTTT+TGG + chr2_1:74183417-74183436 Msa0224320:CDS 50.0%
TCAATTGCAGTGGCAGACGA+GGG - chr2_1:74184177-74184196 None:intergenic 50.0%
ATCAATTGCAGTGGCAGACG+AGG - chr2_1:74184178-74184197 None:intergenic 50.0%
!! TTGCGTTCCGGGTTTGCTGT+TGG + chr2_1:74177876-74177895 Msa0224320:intron 55.0%
CAACACAATGCCTCTGCCCT+TGG + chr2_1:74177988-74178007 Msa0224320:CDS 55.0%
ATGCGACCAAGCAAGGCCAA+GGG - chr2_1:74178007-74178026 None:intergenic 55.0%
GGTGTAGATGCGACCAAGCA+AGG - chr2_1:74178014-74178033 None:intergenic 55.0%
! CTCAACTCGCAGTTTTGCGC+AGG + chr2_1:74178043-74178062 Msa0224320:CDS 55.0%
GATTGCCTTCGCCGTTAGGA+AGG + chr2_1:74178973-74178992 Msa0224320:intron 55.0%
GAAGGTGGATGCTGTCAAGC+TGG + chr2_1:74179019-74179038 Msa0224320:intron 55.0%
! TTTTCTGGGCTCCTGGCCAT+CGG + chr2_1:74179084-74179103 Msa0224320:intron 55.0%
CAATGTGCACCAAGCCTCCA+AGG - chr2_1:74179368-74179387 None:intergenic 55.0%
!! CTTGGAGGCTTGGTGCACAT+TGG + chr2_1:74179366-74179385 Msa0224320:intron 55.0%
TGCTGGAGTTGGGCTGTTCT+TGG - chr2_1:74180810-74180829 None:intergenic 55.0%
GATGTCGAGCCACGGTATTC+GGG + chr2_1:74181011-74181030 Msa0224320:intron 55.0%
TTGTGGCGATGTGCATGGTC+AGG + chr2_1:74181317-74181336 Msa0224320:CDS 55.0%
CGCTGTGAGCTTAGCTCACT+TGG + chr2_1:74181797-74181816 Msa0224320:intron 55.0%
!! GGTGAATATGTGGGGTGTCG+GGG - chr2_1:74181864-74181883 None:intergenic 55.0%
ATGCGGTGAAGTCGAGTGTC+CGG + chr2_1:74182002-74182021 Msa0224320:intron 55.0%
CCTCTTCCAGGGAGAGATTG+TGG - chr2_1:74183384-74183403 None:intergenic 55.0%
CCACAATCTCTCCCTGGAAG+AGG + chr2_1:74183381-74183400 Msa0224320:CDS 55.0%
GCTTGCTTGGTCCTCTTCCA+GGG - chr2_1:74183395-74183414 None:intergenic 55.0%
!! CACCATATGGCGGATTGTGG+TGG + chr2_1:74184041-74184060 Msa0224320:intron 55.0%
TGCCACCACAATCCGCCATA+TGG - chr2_1:74184046-74184065 None:intergenic 55.0%
!! GGTGGCGCCAAAGCGTTTTA+TGG + chr2_1:74184111-74184130 Msa0224320:intron 55.0%
!! GGCGCCAAAGCGTTTTATGG+TGG + chr2_1:74184114-74184133 Msa0224320:intron 55.0%
!! GGGCAGAGGCATTGTGTTGC+CGG - chr2_1:74177987-74178006 None:intergenic 60.0%
GATGCGACCAAGCAAGGCCA+AGG - chr2_1:74178008-74178027 None:intergenic 60.0%
! TCGCAGTTTTGCGCAGGCCA+CGG + chr2_1:74178049-74178068 Msa0224320:CDS 60.0%
ATGGCCCTTCCTAACGGCGA+AGG - chr2_1:74178981-74179000 None:intergenic 60.0%
TCGCCGTTAGGAAGGGCCAT+CGG + chr2_1:74178981-74179000 Msa0224320:intron 60.0%
AATATATGCAGGGGCCGGGC+CGG - chr2_1:74182038-74182057 None:intergenic 60.0%
CGCTTGCTTGGTCCTCTTCC+AGG - chr2_1:74183396-74183415 None:intergenic 60.0%
GGAAGAGGACCAAGCAAGCG+TGG + chr2_1:74183396-74183415 Msa0224320:CDS 60.0%
GACCAAGCAAGCGTGGCGAT+GGG + chr2_1:74183403-74183422 Msa0224320:CDS 60.0%
CCAAGCAAGGCCAAGGGCAG+AGG - chr2_1:74178001-74178020 None:intergenic 65.0%
!! CCTCTGCCCTTGGCCTTGCT+TGG + chr2_1:74177998-74178017 Msa0224320:CDS 65.0%
CCGGGCCGGAGTTCGAATTC+CGG - chr2_1:74182024-74182043 None:intergenic 65.0%
CCGGAATTCGAACTCCGGCC+CGG + chr2_1:74182021-74182040 Msa0224320:intron 65.0%
GGACCAAGCAAGCGTGGCGA+TGG + chr2_1:74183402-74183421 Msa0224320:CDS 65.0%
CACCCATCGCCACGCTTGCT+TGG - chr2_1:74183408-74183427 None:intergenic 65.0%
!! GGGTGTCGGGGTTCGAACCC+CGG - chr2_1:74181852-74181871 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 74177794 74184803 74177794 ID=Msa0224320;Name=Msa0224320
chr2_1 mRNA 74177794 74184803 74177794 ID=Msa0224320-mRNA-1;Parent=Msa0224320;Name=Msa0224320-mRNA-1;_AED=0.24;_eAED=0.24;_QI=119|1|1|1|0.91|0.84|13|384|508
chr2_1 exon 74177794 74177849 74177794 ID=Msa0224320-mRNA-1:exon:21889;Parent=Msa0224320-mRNA-1
chr2_1 exon 74177912 74178170 74177912 ID=Msa0224320-mRNA-1:exon:21890;Parent=Msa0224320-mRNA-1
chr2_1 exon 74179871 74179963 74179871 ID=Msa0224320-mRNA-1:exon:21891;Parent=Msa0224320-mRNA-1
chr2_1 exon 74180082 74180180 74180082 ID=Msa0224320-mRNA-1:exon:21892;Parent=Msa0224320-mRNA-1
chr2_1 exon 74180683 74180832 74180683 ID=Msa0224320-mRNA-1:exon:21893;Parent=Msa0224320-mRNA-1
chr2_1 exon 74181012 74181120 74181012 ID=Msa0224320-mRNA-1:exon:21894;Parent=Msa0224320-mRNA-1
chr2_1 exon 74181221 74181338 74181221 ID=Msa0224320-mRNA-1:exon:21895;Parent=Msa0224320-mRNA-1
chr2_1 exon 74182369 74182516 74182369 ID=Msa0224320-mRNA-1:exon:21896;Parent=Msa0224320-mRNA-1
chr2_1 exon 74183001 74183249 74183001 ID=Msa0224320-mRNA-1:exon:21897;Parent=Msa0224320-mRNA-1
chr2_1 exon 74183352 74183480 74183352 ID=Msa0224320-mRNA-1:exon:21898;Parent=Msa0224320-mRNA-1
chr2_1 exon 74183553 74183653 74183553 ID=Msa0224320-mRNA-1:exon:21899;Parent=Msa0224320-mRNA-1
chr2_1 exon 74183823 74183897 74183823 ID=Msa0224320-mRNA-1:exon:21900;Parent=Msa0224320-mRNA-1
chr2_1 exon 74184360 74184803 74184360 ID=Msa0224320-mRNA-1:exon:21901;Parent=Msa0224320-mRNA-1
chr2_1 five_prime_UTR 74177794 74177849 74177794 ID=Msa0224320-mRNA-1:five_prime_utr;Parent=Msa0224320-mRNA-1
chr2_1 five_prime_UTR 74177912 74177974 74177912 ID=Msa0224320-mRNA-1:five_prime_utr;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74177975 74178170 74177975 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74179871 74179963 74179871 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74180082 74180180 74180082 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74180683 74180832 74180683 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74181012 74181120 74181012 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74181221 74181338 74181221 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74182369 74182516 74182369 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74183001 74183249 74183001 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74183352 74183480 74183352 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74183553 74183653 74183553 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74183823 74183897 74183823 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 CDS 74184360 74184419 74184360 ID=Msa0224320-mRNA-1:cds;Parent=Msa0224320-mRNA-1
chr2_1 three_prime_UTR 74184420 74184803 74184420 ID=Msa0224320-mRNA-1:three_prime_utr;Parent=Msa0224320-mRNA-1
Gene Sequence

>Msa0224320

ATGTCTTCTCCGGCAACACAATGCCTCTGCCCTTGGCCTTGCTTGGTCGCATCTACACCAAAGTCTGTCTCAACTCGCAGTTTTGCGCAGGCCACGGTTGCATCACAATCCAAGGTTTCCAAGATGTTTGCTCAAGCCTTGTTGTTTAACTCGTGCAATATTCCTGCATCACAGCTACCTAAACCTTGTTTCAAAGTTTTCAAAGAAAGAGAGAGACTCATGACACTGCAGTGTAGATTCTCAATAGATGATGCGAAATATGATGATGATGGTCGCATAAATCGAACAGGAACGTTGTTAATTGTGGGTGCACACATAGTGATGGTTGTAATAGGATCTGGAGTGTTGTCATTGGCATTGGCTATTGCTCATTCACACTGGATTAAAGATAAGAAAGGGAAGAAACATACAAGGAGTACAAGTACAAGAAGTATCGAGGTCCAAGACCATCACAAAACAAAAATAAAACAACCAAAAGCAAAGACAAAAAGCAACATGGAAAAGACAACAAGCCAAGAACAGCCCAACTCCAGCACTTATGTCGAGCCACGGTATTCGGGATCAAGAATAGAAGGAGATACTATTACTTTGGATTTCGTAAAGAAAATGATGAATGATTTCAAGGAACAGAAGTGCTTGGATAGAGGGTATGCATCCAAGATTTTGTTGCAAACAAAAAAGGTTTTGAAAGCTTTGCCTTCTCTTGTTGACATAACTGTTCCTCATGGAAAACATGTTACTGTTTGTGGCGATGTGCATGGTCAGTTCTATGATCTTTTGAATATTTTTGAGCTCAATGGGCTTCCTTCAGAAGAAAATCCATATCTATTTAATGGTGACTTTGTAGATAGAGGATCATTTTCAGTGGAAGTCGCATTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCTGCCATGTATATAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATTTGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGACAAATTTGTCAAAATGTTTGCGGAAGTATTCAACTGTTTACCTTTGGCTCATGTGATAAACAAGAAAGTTTTCGTCGTCCATGGAGGCCTTTTTAGTGTTGATGGGGTCAAACTCTCTCAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCTGATGAAGGGTTGATGCATGACTTGCTATGGAGTGATCCACAATCTCTCCCTGGAAGAGGACCAAGCAAGCGTGGCGATGGGTGCTTTTGTTTTGGTGAGGATGTTACAAAAAGGTTCTTGAAGGATAATAATTTAGATTTAGTTGTGAGATCTCATAAATCAAAGCACAAGGGTTATGAGATTCAACATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGAAGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCACCTGATTTGCAACCTAACATTATTACATTTGAAGCAGTGCCACACCCTGATGTTAAGCCAATGGCTTATGCAAACAACTTCAACCGATTGTTCTCATAA
Protein sequence

>Msa0224320

MSSPATQCLCPWPCLVASTPKSVSTRSFAQATVASQSKVSKMFAQALLFNSCNIPASQLPKPCFKVFKERERLMTLQCRFSIDDAKYDDDGRINRTGTLLIVGAHIVMVVIGSGVLSLALAIAHSHWIKDKKGKKHTRSTSTRSIEVQDHHKTKIKQPKAKTKSNMEKTTSQEQPNSSTYVEPRYSGSRIEGDTITLDFVKKMMNDFKEQKCLDRGYASKILLQTKKVLKALPSLVDITVPHGKHVTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVAFTLFAFKCMSPSAMYIARGNHESKSMNKIFGFEGEVRSKLNDKFVKMFAEVFNCLPLAHVINKKVFVVHGGLFSVDGVKLSQIRSINRFCEPPDEGLMHDLLWSDPQSLPGRGPSKRGDGCFCFGEDVTKRFLKDNNLDLVVRSHKSKHKGYEIQHDGKLITVFSAPNYCDQKGNKGAFIRFEAPDLQPNIITFEAVPHPDVKPMAYANNFNRLFS*