Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230830 | XP_003592917.2 | 90.886 | 395 | 6 | 1 | 10 | 404 | 234 | 598 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230830 | sp|Q9STW5|MACP2_ARATH | 71.788 | 397 | 81 | 2 | 10 | 406 | 233 | 598 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230830 | Q1SKW8 | 90.886 | 395 | 6 | 1 | 10 | 404 | 234 | 598 | 0.0 | 730 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0164360 | Msa0230830 | 0.802700 | 4.954396e-49 | -8.615850e-47 |
| Msa0188630 | Msa0230830 | 0.823583 | 1.281170e-53 | -8.615850e-47 |
| Msa0230770 | Msa0230830 | 0.868979 | 4.365172e-66 | -8.615850e-47 |
| Msa0230830 | Msa0270270 | 0.871819 | 5.111020e-67 | -8.615850e-47 |
| Msa0230830 | Msa0722930 | 0.819495 | 1.127369e-52 | -8.615850e-47 |
| Msa0230830 | Msa0723140 | 0.826390 | 2.784915e-54 | -8.615850e-47 |
| Msa0230830 | Msa0843280 | 0.821506 | 3.894673e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230830 | MtrunA17_Chr2g0277061 | 90.886 | 395 | 6 | 1 | 10 | 404 | 234 | 598 | 0.0 | 730 |
| Msa0230830 | MtrunA17_Chr8g0385121 | 62.814 | 398 | 114 | 4 | 15 | 409 | 232 | 598 | 2.48e-166 | 479 |
| Msa0230830 | MtrunA17_Chr4g0046841 | 51.842 | 380 | 143 | 6 | 30 | 402 | 268 | 614 | 1.22e-125 | 376 |
| Msa0230830 | MtrunA17_Chr8g0385131 | 52.432 | 370 | 140 | 4 | 34 | 403 | 235 | 568 | 1.06e-120 | 362 |
| Msa0230830 | MtrunA17_Chr8g0385181 | 47.838 | 370 | 142 | 6 | 34 | 401 | 233 | 553 | 1.37e-105 | 323 |
| Msa0230830 | MtrunA17_Chr8g0391931 | 46.194 | 381 | 162 | 8 | 28 | 399 | 242 | 588 | 3.85e-98 | 305 |
| Msa0230830 | MtrunA17_Chr8g0377631 | 42.469 | 405 | 175 | 9 | 15 | 399 | 250 | 616 | 3.48e-96 | 300 |
| Msa0230830 | MtrunA17_Chr3g0122211 | 40.148 | 406 | 186 | 8 | 15 | 399 | 248 | 617 | 2.60e-88 | 280 |
| Msa0230830 | MtrunA17_Chr2g0284691 | 43.182 | 396 | 157 | 9 | 20 | 400 | 223 | 565 | 4.41e-84 | 268 |
| Msa0230830 | MtrunA17_Chr4g0013011 | 41.689 | 379 | 156 | 8 | 34 | 399 | 256 | 582 | 3.81e-81 | 260 |
| Msa0230830 | MtrunA17_Chr8g0385161 | 45.033 | 302 | 110 | 5 | 102 | 403 | 1 | 246 | 8.72e-75 | 233 |
| Msa0230830 | MtrunA17_Chr8g0385171 | 60.000 | 65 | 25 | 1 | 34 | 98 | 228 | 291 | 1.20e-18 | 85.9 |
| Msa0230830 | MtrunA17_Chr8g0385151 | 60.417 | 48 | 19 | 0 | 52 | 99 | 1 | 48 | 3.48e-16 | 72.4 |
| Msa0230830 | MtrunA17_Chr7g0274911 | 46.575 | 73 | 31 | 2 | 311 | 380 | 13 | 80 | 2.22e-12 | 64.3 |
| Msa0230830 | MtrunA17_Chr7g0274901 | 33.913 | 115 | 45 | 2 | 143 | 256 | 1 | 85 | 3.17e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230830 | AT4G24290.2 | 71.788 | 397 | 81 | 2 | 10 | 406 | 233 | 598 | 0.0 | 587 |
| Msa0230830 | AT4G24290.3 | 71.788 | 397 | 81 | 2 | 10 | 406 | 233 | 598 | 0.0 | 587 |
| Msa0230830 | AT1G28380.1 | 51.697 | 383 | 143 | 8 | 31 | 405 | 261 | 609 | 1.08e-116 | 353 |
| Msa0230830 | AT1G14780.1 | 41.191 | 403 | 179 | 10 | 18 | 399 | 253 | 618 | 1.54e-87 | 278 |
| Msa0230830 | AT1G29690.1 | 42.857 | 385 | 134 | 9 | 35 | 399 | 241 | 559 | 1.66e-82 | 263 |
| Msa0230830 | AT4G24290.1 | 68.269 | 104 | 31 | 1 | 10 | 111 | 233 | 336 | 8.21e-40 | 145 |
Find 122 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATTACCTCTCTATTAAA+TGG | 0.214110 | 2_2:+3043634 | Msa0230830:CDS |
| TGAAGAGCTCCACCAATTCT+TGG | 0.267556 | 2_2:+3044559 | Msa0230830:CDS |
| CAATTGCAAGTTGAGAATTA+TGG | 0.283102 | 2_2:+3045332 | Msa0230830:CDS |
| TGGGATGGGTCTCCCGGGCT+AGG | 0.283433 | 2_2:+3045428 | Msa0230830:CDS |
| ATCTTTACAGTTTAGCTTCA+TGG | 0.292509 | 2_2:+3044661 | Msa0230830:CDS |
| TTTGCTCACATCGTAAATAA+AGG | 0.296564 | 2_2:-3043693 | None:intergenic |
| CCATTTAATAGAGAGGTAAT+TGG | 0.300333 | 2_2:-3043634 | None:intergenic |
| TATAAATTCAGCGGTCTATC+CGG | 0.305913 | 2_2:+3045538 | Msa0230830:CDS |
| GTGAGGAAAATAAAATTGTT+AGG | 0.311077 | 2_2:-3043321 | None:intergenic |
| CCCGAGTGGGATGGGTCTCC+CGG | 0.314842 | 2_2:+3045422 | Msa0230830:CDS |
| TGTCACTGGAGCAAGACTTT+TGG | 0.330179 | 2_2:+3045658 | Msa0230830:CDS |
| TCTCTATTAAATGGAGTTCC+AGG | 0.346369 | 2_2:+3043643 | Msa0230830:CDS |
| CGCAGGAGACTCCTGGCTAT+TGG | 0.347040 | 2_2:+3045633 | Msa0230830:CDS |
| TTTCCTCACAGTTTGGAATC+AGG | 0.347420 | 2_2:+3043335 | Msa0230830:CDS |
| CCGGTAAATCTTTATTCATC+TGG | 0.349002 | 2_2:+3044710 | Msa0230830:CDS |
| GTGCCCACTGCCTGGGAAGC+TGG | 0.351878 | 2_2:-3044586 | None:intergenic |
| TTTGTTGACTATGATATTAC+CGG | 0.352662 | 2_2:+3045718 | Msa0230830:CDS |
| CCAGATGAATAAAGATTTAC+CGG | 0.365909 | 2_2:-3044710 | None:intergenic |
| CTTAAATTCTCAACTGTGTT+GGG | 0.368805 | 2_2:+3045380 | Msa0230830:CDS |
| TTATGTGAATAAGAACTTGA+TGG | 0.371590 | 2_2:-3043388 | None:intergenic |
| CCCGGGCTAGGGGCCAAGTC+TGG | 0.385188 | 2_2:+3045440 | Msa0230830:CDS |
| GGATGGGTCTCCCGGGCTAG+GGG | 0.386935 | 2_2:+3045430 | Msa0230830:CDS |
| TCCAGACTTGGCCCCTAGCC+CGG | 0.390185 | 2_2:-3045441 | None:intergenic |
| GGGATGGGTCTCCCGGGCTA+GGG | 0.391858 | 2_2:+3045429 | Msa0230830:CDS |
| TCTTTACAGTTTAGCTTCAT+GGG | 0.397162 | 2_2:+3044662 | Msa0230830:CDS |
| TAAATCATGCTCGTGTCCTT+TGG | 0.399546 | 2_2:+3044781 | Msa0230830:CDS |
| ATCAAGTTCTTATTCACATA+AGG | 0.404312 | 2_2:+3043390 | Msa0230830:CDS |
| GAATTTATATTAACATCTGC+TGG | 0.404538 | 2_2:-3045524 | None:intergenic |
| GCAGGAGACTCCTGGCTATT+GGG | 0.407109 | 2_2:+3045634 | Msa0230830:CDS |
| GTGGTTGCAGACCGTTCAAT+TGG | 0.415947 | 2_2:+3043582 | Msa0230830:CDS |
| TTGGGAGCTTGTACGGGAAC+AGG | 0.426439 | 2_2:-3045569 | None:intergenic |
| TAGAAGCTTGGGAGCTTGTA+CGG | 0.428330 | 2_2:-3045576 | None:intergenic |
| CCTGGCTATTGGGTTGTCAC+TGG | 0.435676 | 2_2:+3045644 | Msa0230830:CDS |
| GAATACAGGTGCCCACTGCC+TGG | 0.436080 | 2_2:-3044594 | None:intergenic |
| CTTATTAGCCAACACTTCAC+AGG | 0.441277 | 2_2:+3045476 | Msa0230830:CDS |
| TGGTGGAGCTCTTCAATTGG+TGG | 0.442263 | 2_2:-3044551 | None:intergenic |
| ATCTTCCTCTTGGTCCTCAA+TGG | 0.443218 | 2_2:+3044621 | Msa0230830:CDS |
| GTATTCAGTGATCTTCCTCT+TGG | 0.451919 | 2_2:+3044611 | Msa0230830:CDS |
| CCAGACTTGGCCCCTAGCCC+GGG | 0.452765 | 2_2:-3045440 | None:intergenic |
| CTCAACTGTGTTGGGAGCTA+AGG | 0.454561 | 2_2:+3045388 | Msa0230830:CDS |
| CTCATAGAATCTCTTATCAT+AGG | 0.457958 | 2_2:-3045228 | None:intergenic |
| ATGTTATAACAGGTTGATGT+AGG | 0.461015 | 2_2:+3045065 | Msa0230830:intron |
| GGTCTCCGTCTCTATCTAGA+AGG | 0.461252 | 2_2:+3045104 | Msa0230830:CDS |
| AATTGGTGGAGCTCTTCAAT+TGG | 0.463212 | 2_2:-3044554 | None:intergenic |
| CTCAACTTGCAATTGTGCTC+CGG | 0.467644 | 2_2:-3045324 | None:intergenic |
| ACTTAAATTCTCAACTGTGT+TGG | 0.471471 | 2_2:+3045379 | Msa0230830:CDS |
| GAGGAGCTTTCAATAGTAAC+CGG | 0.473360 | 2_2:+3045305 | Msa0230830:CDS |
| CTTTATTCATCTGGACGTCT+AGG | 0.476189 | 2_2:+3044719 | Msa0230830:CDS |
| ATAAATTCAGCGGTCTATCC+GGG | 0.477465 | 2_2:+3045539 | Msa0230830:CDS |
| TCATGTGTGCACTGCTCCTG+TGG | 0.477974 | 2_2:+3045274 | Msa0230830:CDS |
| TCTTGGAATTCCAGCTTCCC+AGG | 0.479841 | 2_2:+3044576 | Msa0230830:CDS |
| CCCGGGAGACCCATCCCACT+CGG | 0.481170 | 2_2:-3045423 | None:intergenic |
| GAAGCTGGAATTCCAAGAAT+TGG | 0.481340 | 2_2:-3044571 | None:intergenic |
| CTAGGTATTCAGTGGCAGAC+TGG | 0.482502 | 2_2:+3044737 | Msa0230830:CDS |
| TGAGGAAAATAAAATTGTTA+GGG | 0.484998 | 2_2:-3043320 | None:intergenic |
| TAGAGAGGTAATTGGAATGA+AGG | 0.488757 | 2_2:-3043626 | None:intergenic |
| AATTCCAGCTTCCCAGGCAG+TGG | 0.490270 | 2_2:+3044582 | Msa0230830:CDS |
| GGGATGAAAGGTGTTGCATA+TGG | 0.493225 | 2_2:-3045151 | None:intergenic |
| AGAAGCTTGGGAGCTTGTAC+GGG | 0.496532 | 2_2:-3045575 | None:intergenic |
| CACTGCTCCTGTGGAATCTG+AGG | 0.499061 | 2_2:+3045283 | Msa0230830:CDS |
| TTAAATGGAGTTCCAGGGAG+TGG | 0.502695 | 2_2:+3043649 | Msa0230830:CDS |
| AACAGGTTGATGTAGGTAAG+AGG | 0.504904 | 2_2:+3045072 | Msa0230830:intron |
| AAGGACATTGAGATCACATC+AGG | 0.507817 | 2_2:-3043607 | None:intergenic |
| CATTTGGATCATCTTCAAGC+TGG | 0.510901 | 2_2:-3045187 | None:intergenic |
| TAAAACATCCCGAGTGGGAT+GGG | 0.512771 | 2_2:+3045414 | Msa0230830:CDS |
| GATTCTATGAGAAGGTTCAA+TGG | 0.513867 | 2_2:+3045240 | Msa0230830:CDS |
| AGTTTAGCTTCATGGGGCCA+AGG | 0.525974 | 2_2:+3044669 | Msa0230830:CDS |
| ATGGTGTTCACGTAGAGCCT+TGG | 0.526771 | 2_2:-3044686 | None:intergenic |
| GTAGGTAAGAGGCCAGTGAC+TGG | 0.531568 | 2_2:+3045083 | Msa0230830:CDS |
| AGAGGACCGCAGGAGACTCC+TGG | 0.540384 | 2_2:+3045626 | Msa0230830:CDS |
| CCGAGTGGGATGGGTCTCCC+GGG | 0.548033 | 2_2:+3045423 | Msa0230830:CDS |
| AATACAGGTGCCCACTGCCT+GGG | 0.548056 | 2_2:-3044593 | None:intergenic |
| TGAATAAAGATTTACCGGTA+TGG | 0.549065 | 2_2:-3044705 | None:intergenic |
| ACATCTGCTGGACGAGGAGG+CGG | 0.549259 | 2_2:-3045512 | None:intergenic |
| AGCTCCTCCTCAGATTCCAC+AGG | 0.551132 | 2_2:-3045290 | None:intergenic |
| ATATTAACATCTGCTGGACG+AGG | 0.551402 | 2_2:-3045518 | None:intergenic |
| GAGCTCCGTTGCTTCCATTG+AGG | 0.553578 | 2_2:-3044635 | None:intergenic |
| ACGGGAACAGGAGGGCCGCC+CGG | 0.555975 | 2_2:-3045557 | None:intergenic |
| TCTTACCTTCTAGATAGAGA+CGG | 0.557827 | 2_2:-3045109 | None:intergenic |
| CCAGTGACAACCCAATAGCC+AGG | 0.559250 | 2_2:-3045644 | None:intergenic |
| AACTGTGTTGGGAGCTAAGG+AGG | 0.560977 | 2_2:+3045391 | Msa0230830:CDS |
| GTAAATAAAGGTTTATAGCA+TGG | 0.562633 | 2_2:-3043681 | None:intergenic |
| TGGCTCAAGAATCCACTCCC+TGG | 0.564442 | 2_2:-3043661 | None:intergenic |
| AGAGGAAGATCACTGAATAC+AGG | 0.565542 | 2_2:-3044608 | None:intergenic |
| GCTGGAATTCCAAGAATTGG+TGG | 0.566479 | 2_2:-3044568 | None:intergenic |
| GGAGCTTGTACGGGAACAGG+AGG | 0.569208 | 2_2:-3045566 | None:intergenic |
| TTATTAGCCAACACTTCACA+GGG | 0.577018 | 2_2:+3045477 | Msa0230830:CDS |
| TAGAAGGTAAGAAAAGCAAT+CGG | 0.578082 | 2_2:+3045120 | Msa0230830:CDS |
| ATTCCAGCTTCCCAGGCAGT+GGG | 0.581178 | 2_2:+3044583 | Msa0230830:CDS |
| AAAATTTATCGCATAATCAG+TGG | 0.585243 | 2_2:+3043563 | Msa0230830:CDS |
| TGAGATGACTAGAGGACCGC+AGG | 0.585822 | 2_2:+3045616 | Msa0230830:CDS |
| CCGGGAGACCCATCCCACTC+GGG | 0.589214 | 2_2:-3045422 | None:intergenic |
| TTGGTCCTCAATGGAAGCAA+CGG | 0.591455 | 2_2:+3044630 | Msa0230830:CDS |
| CACATCAGGCTCCAATTGAA+CGG | 0.591595 | 2_2:-3043593 | None:intergenic |
| TGCTCCTGTGGAATCTGAGG+AGG | 0.592386 | 2_2:+3045286 | Msa0230830:CDS |
| GTAAAACATCCCGAGTGGGA+TGG | 0.595842 | 2_2:+3045413 | Msa0230830:CDS |
| GAAAAGCCCCTGTGAAGTGT+TGG | 0.596845 | 2_2:-3045484 | None:intergenic |
| CTCTATTAAATGGAGTTCCA+GGG | 0.597190 | 2_2:+3043644 | Msa0230830:CDS |
| AAGTTCTTATTCACATAAGG+AGG | 0.597395 | 2_2:+3043393 | Msa0230830:CDS |
| TAGAGACGGAGACCAGTCAC+TGG | 0.600119 | 2_2:-3045095 | None:intergenic |
| CTTTACAGTTTAGCTTCATG+GGG | 0.605349 | 2_2:+3044663 | Msa0230830:CDS |
| TGGAACTCCATTTAATAGAG+AGG | 0.607859 | 2_2:-3043641 | None:intergenic |
| AGTGGATATAAGTCCAGACT+TGG | 0.608342 | 2_2:-3045453 | None:intergenic |
| AGGTAAGAAAAGCAATCGGT+TGG | 0.619371 | 2_2:+3045124 | Msa0230830:CDS |
| TGAAAGGTGTTGCATATGGA+TGG | 0.621383 | 2_2:-3045147 | None:intergenic |
| TGATAAGAGATTCTATGAGA+AGG | 0.622926 | 2_2:+3045232 | Msa0230830:CDS |
| GCTCTACGTGAACACCATAC+CGG | 0.625303 | 2_2:+3044691 | Msa0230830:CDS |
| TGCTTCCATTGAGGACCAAG+AGG | 0.639157 | 2_2:-3044626 | None:intergenic |
| TTAACATCTGCTGGACGAGG+AGG | 0.648626 | 2_2:-3045515 | None:intergenic |
| GGAGGTAAAACATCCCGAGT+GGG | 0.648984 | 2_2:+3045409 | Msa0230830:CDS |
| GAGCTTGTACGGGAACAGGA+GGG | 0.653809 | 2_2:-3045565 | None:intergenic |
| TGATTTATTATGATTAGACG+AGG | 0.659442 | 2_2:-3044765 | None:intergenic |
| GACACAACTGAGATGACTAG+AGG | 0.662771 | 2_2:+3045608 | Msa0230830:CDS |
| GAAGTGTTGGCTAATAAGAG+TGG | 0.672984 | 2_2:-3045471 | None:intergenic |
| CTGGACGTCTAGGTATTCAG+TGG | 0.675217 | 2_2:+3044729 | Msa0230830:CDS |
| AGATGTTAATATAAATTCAG+CGG | 0.677176 | 2_2:+3045529 | Msa0230830:CDS |
| CGTCCTGATTCCAAACTGTG+AGG | 0.687145 | 2_2:-3043338 | None:intergenic |
| AGGAGGTAAAACATCCCGAG+TGG | 0.699249 | 2_2:+3045408 | Msa0230830:CDS |
| CAATAGCCAGGAGTCTCCTG+CGG | 0.701835 | 2_2:-3045632 | None:intergenic |
| TGATGATTATGATGACACGT+TGG | 0.726229 | 2_2:+3045748 | Msa0230830:CDS |
| TATTAGCCAACACTTCACAG+GGG | 0.757600 | 2_2:+3045478 | Msa0230830:CDS |
| AATTCAGCGGTCTATCCGGG+CGG | 0.783551 | 2_2:+3045542 | Msa0230830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATATATAAATATTCC+GGG | - | chr2_2:3043436-3043455 | None:intergenic | 10.0% |
| !!! | TTATTAATAATTTTTATTCC+CGG | - | chr2_2:3043829-3043848 | None:intergenic | 10.0% |
| !! | GCAAAAACAAAAATAATATA+AGG | - | chr2_2:3043498-3043517 | None:intergenic | 15.0% |
| !!! | TATATTATTTTTGTTTTTGC+AGG | + | chr2_2:3043498-3043517 | Msa0230830:intron | 15.0% |
| !! | ATTATATAATATAACAGCTT+GGG | - | chr2_2:3043803-3043822 | None:intergenic | 15.0% |
| !! | AATTATATAATATAACAGCT+TGG | - | chr2_2:3043804-3043823 | None:intergenic | 15.0% |
| !!! | TATTAATAATTTTTATTCCC+GGG | - | chr2_2:3043828-3043847 | None:intergenic | 15.0% |
| !! | TGAGGAAAATAAAATTGTTA+GGG | - | chr2_2:3043323-3043342 | None:intergenic | 20.0% |
| !! | TGTTATATTATATAATTGCC+CGG | + | chr2_2:3043807-3043826 | Msa0230830:intron | 20.0% |
| !! | GAATATAGATATGCTATATA+GGG | - | chr2_2:3043987-3044006 | None:intergenic | 20.0% |
| !! | AGAATATAGATATGCTATAT+AGG | - | chr2_2:3043988-3044007 | None:intergenic | 20.0% |
| !!! | GTTGATGTTTTATTTCATTT+TGG | + | chr2_2:3044156-3044175 | Msa0230830:intron | 20.0% |
| !!! | AACAAAATTTCATTTGGTTT+TGG | - | chr2_2:3044226-3044245 | None:intergenic | 20.0% |
| !!! | AAAACCAAATGAAATTTTGT+TGG | + | chr2_2:3044225-3044244 | Msa0230830:intron | 20.0% |
| !! | AAATTACCATTCTGTAATAA+GGG | - | chr2_2:3044365-3044384 | None:intergenic | 20.0% |
| !! | TAAATTACCATTCTGTAATA+AGG | - | chr2_2:3044366-3044385 | None:intergenic | 20.0% |
| !! | ATTTCATGAAATCAAAATTC+AGG | - | chr2_2:3044408-3044427 | None:intergenic | 20.0% |
| !! | AAGGAAACAAATTTAAAAGA+GGG | - | chr2_2:3044452-3044471 | None:intergenic | 20.0% |
| !!! | TTTGTTGTCATTTATTGATT+TGG | + | chr2_2:3044998-3045017 | Msa0230830:intron | 20.0% |
| !! | AGATGTTAATATAAATTCAG+CGG | + | chr2_2:3045529-3045548 | Msa0230830:CDS | 20.0% |
| ! | GTGAGGAAAATAAAATTGTT+AGG | - | chr2_2:3043324-3043343 | None:intergenic | 25.0% |
| !!! | ATTTTATTTTCCTCACAGTT+TGG | + | chr2_2:3043328-3043347 | Msa0230830:CDS | 25.0% |
| ! | TTATGTGAATAAGAACTTGA+TGG | - | chr2_2:3043391-3043410 | None:intergenic | 25.0% |
| ! | ATCAAGTTCTTATTCACATA+AGG | + | chr2_2:3043390-3043409 | Msa0230830:CDS | 25.0% |
| ! | AAAATTTATCGCATAATCAG+TGG | + | chr2_2:3043563-3043582 | Msa0230830:CDS | 25.0% |
| ! | GTAAATAAAGGTTTATAGCA+TGG | - | chr2_2:3043684-3043703 | None:intergenic | 25.0% |
| ! | GTTATATTATATAATTGCCC+GGG | + | chr2_2:3043808-3043827 | Msa0230830:intron | 25.0% |
| ! | TGTATTCCTTATATGTAAGT+AGG | + | chr2_2:3043853-3043872 | Msa0230830:intron | 25.0% |
| ! | GTATTCCTTATATGTAAGTA+GGG | + | chr2_2:3043854-3043873 | Msa0230830:intron | 25.0% |
| ! | TATTCCTTATATGTAAGTAG+GGG | + | chr2_2:3043855-3043874 | Msa0230830:intron | 25.0% |
| ! | AAAACATCAACAAGCATTAT+GGG | - | chr2_2:3044147-3044166 | None:intergenic | 25.0% |
| ! | TAAAACATCAACAAGCATTA+TGG | - | chr2_2:3044148-3044167 | None:intergenic | 25.0% |
| !!! | AAAATTTCATTTGGTTTTGG+AGG | - | chr2_2:3044223-3044242 | None:intergenic | 25.0% |
| ! | TTCTCCAACAAAATTTCATT+TGG | - | chr2_2:3044232-3044251 | None:intergenic | 25.0% |
| ! | GTATGTTTCAGTACTTAATA+AGG | - | chr2_2:3044337-3044356 | None:intergenic | 25.0% |
| ! | TCATGAAATTAAAATTCCCA+TGG | + | chr2_2:3044419-3044438 | Msa0230830:intron | 25.0% |
| ! | GAAGGAAACAAATTTAAAAG+AGG | - | chr2_2:3044453-3044472 | None:intergenic | 25.0% |
| ! | AATGATGAAACATTTCAAAC+TGG | - | chr2_2:3044508-3044527 | None:intergenic | 25.0% |
| ! | TGATTTATTATGATTAGACG+AGG | - | chr2_2:3044768-3044787 | None:intergenic | 25.0% |
| ! | AGGAAAATTACTAAATCAGT+GGG | + | chr2_2:3044814-3044833 | Msa0230830:intron | 25.0% |
| ! | TTGTTTATATTCACATGTAG+CGG | + | chr2_2:3044853-3044872 | Msa0230830:intron | 25.0% |
| !!! | AATTCACTGTATTTTAACCT+TGG | + | chr2_2:3044964-3044983 | Msa0230830:intron | 25.0% |
| ! | CAATAAATGACAACAAACTT+CGG | - | chr2_2:3044995-3045014 | None:intergenic | 25.0% |
| !! | TGTTATAACATGAAGTATTC+CGG | - | chr2_2:3045056-3045075 | None:intergenic | 25.0% |
| ! | GAATTTATATTAACATCTGC+TGG | - | chr2_2:3045527-3045546 | None:intergenic | 25.0% |
| !!! | TCAACAAATTTTAGAAGCTT+GGG | - | chr2_2:3045590-3045609 | None:intergenic | 25.0% |
| ! | AGAAGGGAAAAATTTCTTTA+CGG | + | chr2_2:3045684-3045703 | Msa0230830:CDS | 25.0% |
| !! | TTTGTTGACTATGATATTAC+CGG | + | chr2_2:3045718-3045737 | Msa0230830:CDS | 25.0% |
| AAGTTCTTATTCACATAAGG+AGG | + | chr2_2:3043393-3043412 | Msa0230830:CDS | 30.0% | |
| ! | ATATAGTAAGCTTTTGCAAG+AGG | + | chr2_2:3043521-3043540 | Msa0230830:CDS | 30.0% |
| CCATTTAATAGAGAGGTAAT+TGG | - | chr2_2:3043637-3043656 | None:intergenic | 30.0% | |
| CCAATTACCTCTCTATTAAA+TGG | + | chr2_2:3043634-3043653 | Msa0230830:CDS | 30.0% | |
| TTTGCTCACATCGTAAATAA+AGG | - | chr2_2:3043696-3043715 | None:intergenic | 30.0% | |
| ATTCCTTATATGTAAGTAGG+GGG | + | chr2_2:3043856-3043875 | Msa0230830:intron | 30.0% | |
| ! | AGGTAGTTATGGTTTGTATT+TGG | + | chr2_2:3043884-3043903 | Msa0230830:intron | 30.0% |
| !! | TGGTTTGTATTTGGTAGTTT+TGG | + | chr2_2:3043893-3043912 | Msa0230830:intron | 30.0% |
| ! | GGAAAAAGTTCATTCTCTTT+TGG | + | chr2_2:3043914-3043933 | Msa0230830:intron | 30.0% |
| TAGATCATTAGGAACTTATC+AGG | + | chr2_2:3044088-3044107 | Msa0230830:intron | 30.0% | |
| TCTGGTTGTAAAAACTATAG+TGG | - | chr2_2:3044116-3044135 | None:intergenic | 30.0% | |
| ATATGATCAGTCAACAATGA+AGG | - | chr2_2:3044471-3044490 | None:intergenic | 30.0% | |
| ! | ATCTTTACAGTTTAGCTTCA+TGG | + | chr2_2:3044661-3044680 | Msa0230830:CDS | 30.0% |
| ! | TCTTTACAGTTTAGCTTCAT+GGG | + | chr2_2:3044662-3044681 | Msa0230830:CDS | 30.0% |
| TGAATAAAGATTTACCGGTA+TGG | - | chr2_2:3044708-3044727 | None:intergenic | 30.0% | |
| CCAGATGAATAAAGATTTAC+CGG | - | chr2_2:3044713-3044732 | None:intergenic | 30.0% | |
| GAGGAAAATTACTAAATCAG+TGG | + | chr2_2:3044813-3044832 | Msa0230830:intron | 30.0% | |
| ! | GTTATAACATGAAGTATTCC+GGG | - | chr2_2:3045055-3045074 | None:intergenic | 30.0% |
| GGAATACTTCATGTTATAAC+AGG | + | chr2_2:3045055-3045074 | Msa0230830:intron | 30.0% | |
| !! | ATGTTATAACAGGTTGATGT+AGG | + | chr2_2:3045065-3045084 | Msa0230830:intron | 30.0% |
| TAGAAGGTAAGAAAAGCAAT+CGG | + | chr2_2:3045120-3045139 | Msa0230830:CDS | 30.0% | |
| !! | TTTCGTCTGAAGTTTTCATT+TGG | - | chr2_2:3045206-3045225 | None:intergenic | 30.0% |
| CTCATAGAATCTCTTATCAT+AGG | - | chr2_2:3045231-3045250 | None:intergenic | 30.0% | |
| TGATAAGAGATTCTATGAGA+AGG | + | chr2_2:3045232-3045251 | Msa0230830:CDS | 30.0% | |
| ! | CAATTGCAAGTTGAGAATTA+TGG | + | chr2_2:3045332-3045351 | Msa0230830:CDS | 30.0% |
| ACTTAAATTCTCAACTGTGT+TGG | + | chr2_2:3045379-3045398 | Msa0230830:CDS | 30.0% | |
| CTTAAATTCTCAACTGTGTT+GGG | + | chr2_2:3045380-3045399 | Msa0230830:CDS | 30.0% | |
| !! | GTCAACAAATTTTAGAAGCT+TGG | - | chr2_2:3045591-3045610 | None:intergenic | 30.0% |
| GAAGGGAAAAATTTCTTTAC+GGG | + | chr2_2:3045685-3045704 | Msa0230830:CDS | 30.0% | |
| TCATAATCATCATCATCATC+CGG | - | chr2_2:3045740-3045759 | None:intergenic | 30.0% | |
| GTATGCTTAGAACATTTACC+CGG | + | chr2_2:3043415-3043434 | Msa0230830:intron | 35.0% | |
| TAGAGAGGTAATTGGAATGA+AGG | - | chr2_2:3043629-3043648 | None:intergenic | 35.0% | |
| TGGAACTCCATTTAATAGAG+AGG | - | chr2_2:3043644-3043663 | None:intergenic | 35.0% | |
| TCTCTATTAAATGGAGTTCC+AGG | + | chr2_2:3043643-3043662 | Msa0230830:CDS | 35.0% | |
| CTCTATTAAATGGAGTTCCA+GGG | + | chr2_2:3043644-3043663 | Msa0230830:CDS | 35.0% | |
| TAACCCCCTACTTACATATA+AGG | - | chr2_2:3043862-3043881 | None:intergenic | 35.0% | |
| TTATATGTAAGTAGGGGGTT+AGG | + | chr2_2:3043861-3043880 | Msa0230830:intron | 35.0% | |
| AAGTTAATATCTCGCCCAAA+GGG | + | chr2_2:3044047-3044066 | Msa0230830:intron | 35.0% | |
| TTCCTAATGATCTACTTACG+CGG | - | chr2_2:3044082-3044101 | None:intergenic | 35.0% | |
| !!! | AGCATTTTTCAAGTCCTTGT+GGG | - | chr2_2:3044292-3044311 | None:intergenic | 35.0% |
| ! | CTTTACAGTTTAGCTTCATG+GGG | + | chr2_2:3044663-3044682 | Msa0230830:CDS | 35.0% |
| CCGGTAAATCTTTATTCATC+TGG | + | chr2_2:3044710-3044729 | Msa0230830:CDS | 35.0% | |
| ! | GCATCTTTATTTGCAAGTCT+AGG | - | chr2_2:3044881-3044900 | None:intergenic | 35.0% |
| GCAACATTTATTCTAATGCC+CGG | + | chr2_2:3045034-3045053 | Msa0230830:intron | 35.0% | |
| TCTTACCTTCTAGATAGAGA+CGG | - | chr2_2:3045112-3045131 | None:intergenic | 35.0% | |
| !! | AGATTTTTGGAAGGGATGAA+AGG | - | chr2_2:3045166-3045185 | None:intergenic | 35.0% |
| !! | AAGCTGGAAGATTTTTGGAA+GGG | - | chr2_2:3045174-3045193 | None:intergenic | 35.0% |
| ! | TCTTCAAGCTGGAAGATTTT+TGG | - | chr2_2:3045179-3045198 | None:intergenic | 35.0% |
| GATTCTATGAGAAGGTTCAA+TGG | + | chr2_2:3045240-3045259 | Msa0230830:CDS | 35.0% | |
| TTATTAGCCAACACTTCACA+GGG | + | chr2_2:3045477-3045496 | Msa0230830:CDS | 35.0% | |
| TATAAATTCAGCGGTCTATC+CGG | + | chr2_2:3045538-3045557 | Msa0230830:CDS | 35.0% | |
| TGATGATTATGATGACACGT+TGG | + | chr2_2:3045748-3045767 | Msa0230830:CDS | 35.0% | |
| ! | TTTCCTCACAGTTTGGAATC+AGG | + | chr2_2:3043335-3043354 | Msa0230830:CDS | 40.0% |
| AAGGACATTGAGATCACATC+AGG | - | chr2_2:3043610-3043629 | None:intergenic | 40.0% | |
| !!! | AACTGTTGCCTGTGTTGTTT+TGG | + | chr2_2:3043777-3043796 | Msa0230830:intron | 40.0% |
| TGAGAGTCATAGTTAGCTAG+AGG | - | chr2_2:3044015-3044034 | None:intergenic | 40.0% | |
| CAAGTTAATATCTCGCCCAA+AGG | + | chr2_2:3044046-3044065 | Msa0230830:intron | 40.0% | |
| ATCCGCGTAAGTAGATCATT+AGG | + | chr2_2:3044077-3044096 | Msa0230830:intron | 40.0% | |
| ! | TAGTTTTTACAACCAGACCC+AGG | + | chr2_2:3044119-3044138 | Msa0230830:intron | 40.0% |
| AACAAGCATTATGGGTTCCT+GGG | - | chr2_2:3044139-3044158 | None:intergenic | 40.0% | |
| !! | GAAATGTGTGTGCTAGCTTT+AGG | + | chr2_2:3044249-3044268 | Msa0230830:intron | 40.0% |
| !! | CTAGCTTTAGGAGTGTGTAT+AGG | + | chr2_2:3044261-3044280 | Msa0230830:intron | 40.0% |
| !!! | CAGCATTTTTCAAGTCCTTG+TGG | - | chr2_2:3044293-3044312 | None:intergenic | 40.0% |
| CAGACACCCTTATTACAGAA+TGG | + | chr2_2:3044356-3044375 | Msa0230830:intron | 40.0% | |
| AAAAGAGGGTGATGATCCAT+GGG | - | chr2_2:3044438-3044457 | None:intergenic | 40.0% | |
| TAAAAGAGGGTGATGATCCA+TGG | - | chr2_2:3044439-3044458 | None:intergenic | 40.0% | |
| AATTGGTGGAGCTCTTCAAT+TGG | - | chr2_2:3044557-3044576 | None:intergenic | 40.0% | |
| GAAGCTGGAATTCCAAGAAT+TGG | - | chr2_2:3044574-3044593 | None:intergenic | 40.0% | |
| AGAGGAAGATCACTGAATAC+AGG | - | chr2_2:3044611-3044630 | None:intergenic | 40.0% | |
| GTATTCAGTGATCTTCCTCT+TGG | + | chr2_2:3044611-3044630 | Msa0230830:CDS | 40.0% | |
| CTTTATTCATCTGGACGTCT+AGG | + | chr2_2:3044719-3044738 | Msa0230830:CDS | 40.0% | |
| TAAATCATGCTCGTGTCCTT+TGG | + | chr2_2:3044781-3044800 | Msa0230830:CDS | 40.0% | |
| TTTCCTCCAACACAAACCAA+AGG | - | chr2_2:3044800-3044819 | None:intergenic | 40.0% | |
| ! | ATCAGTGGGAAGAAGCTTTT+AGG | + | chr2_2:3044828-3044847 | Msa0230830:intron | 40.0% |
| AACAAACTTCGGAATGTCCA+AGG | - | chr2_2:3044984-3045003 | None:intergenic | 40.0% | |
| !! | AACAGGTTGATGTAGGTAAG+AGG | + | chr2_2:3045072-3045091 | Msa0230830:intron | 40.0% |
| AGGTAAGAAAAGCAATCGGT+TGG | + | chr2_2:3045124-3045143 | Msa0230830:CDS | 40.0% | |
| !! | TGAAAGGTGTTGCATATGGA+TGG | - | chr2_2:3045150-3045169 | None:intergenic | 40.0% |
| !! | CAAGCTGGAAGATTTTTGGA+AGG | - | chr2_2:3045175-3045194 | None:intergenic | 40.0% |
| CATTTGGATCATCTTCAAGC+TGG | - | chr2_2:3045190-3045209 | None:intergenic | 40.0% | |
| GAGGAGCTTTCAATAGTAAC+CGG | + | chr2_2:3045305-3045324 | Msa0230830:CDS | 40.0% | |
| AGTGGATATAAGTCCAGACT+TGG | - | chr2_2:3045456-3045475 | None:intergenic | 40.0% | |
| !! | GAAGTGTTGGCTAATAAGAG+TGG | - | chr2_2:3045474-3045493 | None:intergenic | 40.0% |
| CTTATTAGCCAACACTTCAC+AGG | + | chr2_2:3045476-3045495 | Msa0230830:CDS | 40.0% | |
| TATTAGCCAACACTTCACAG+GGG | + | chr2_2:3045478-3045497 | Msa0230830:CDS | 40.0% | |
| ATATTAACATCTGCTGGACG+AGG | - | chr2_2:3045521-3045540 | None:intergenic | 40.0% | |
| ATAAATTCAGCGGTCTATCC+GGG | + | chr2_2:3045539-3045558 | Msa0230830:CDS | 40.0% | |
| !! | AGCAAGACTTTTGGTTGAGA+AGG | + | chr2_2:3045667-3045686 | Msa0230830:CDS | 40.0% |
| !! | GCAAGACTTTTGGTTGAGAA+GGG | + | chr2_2:3045668-3045687 | Msa0230830:CDS | 40.0% |
| ! | GTAAGCTTTTGCAAGAGGAG+AGG | + | chr2_2:3043526-3043545 | Msa0230830:CDS | 45.0% |
| CACATCAGGCTCCAATTGAA+CGG | - | chr2_2:3043596-3043615 | None:intergenic | 45.0% | |
| TTAAATGGAGTTCCAGGGAG+TGG | + | chr2_2:3043649-3043668 | Msa0230830:CDS | 45.0% | |
| TATGTAAGTAGGGGGTTAGG+AGG | + | chr2_2:3043864-3043883 | Msa0230830:intron | 45.0% | |
| !!! | TTTTGGAGTTTCGCAACTCC+TGG | + | chr2_2:3043931-3043950 | Msa0230830:intron | 45.0% |
| ACTATAGCAACATGCTGTCC+AGG | - | chr2_2:3043952-3043971 | None:intergenic | 45.0% | |
| CAACAAGCATTATGGGTTCC+TGG | - | chr2_2:3044140-3044159 | None:intergenic | 45.0% | |
| !! | GCTTTAGGAGTGTGTATAGG+TGG | + | chr2_2:3044264-3044283 | Msa0230830:intron | 45.0% |
| TGAAGAGCTCCACCAATTCT+TGG | + | chr2_2:3044559-3044578 | Msa0230830:CDS | 45.0% | |
| GCTGGAATTCCAAGAATTGG+TGG | - | chr2_2:3044571-3044590 | None:intergenic | 45.0% | |
| ATCTTCCTCTTGGTCCTCAA+TGG | + | chr2_2:3044621-3044640 | Msa0230830:CDS | 45.0% | |
| TTGGTCCTCAATGGAAGCAA+CGG | + | chr2_2:3044630-3044649 | Msa0230830:CDS | 45.0% | |
| !! | TCGTGTCCTTTGGTTTGTGT+TGG | + | chr2_2:3044791-3044810 | Msa0230830:intron | 45.0% |
| !! | TGTCCTTTGGTTTGTGTTGG+AGG | + | chr2_2:3044794-3044813 | Msa0230830:intron | 45.0% |
| !! | GGGATGAAAGGTGTTGCATA+TGG | - | chr2_2:3045154-3045173 | None:intergenic | 45.0% |
| CTCAACTTGCAATTGTGCTC+CGG | - | chr2_2:3045327-3045346 | None:intergenic | 45.0% | |
| TAAAACATCCCGAGTGGGAT+GGG | + | chr2_2:3045414-3045433 | Msa0230830:CDS | 45.0% | |
| TAGAAGCTTGGGAGCTTGTA+CGG | - | chr2_2:3045579-3045598 | None:intergenic | 45.0% | |
| GACACAACTGAGATGACTAG+AGG | + | chr2_2:3045608-3045627 | Msa0230830:CDS | 45.0% | |
| ! | TGTCACTGGAGCAAGACTTT+TGG | + | chr2_2:3045658-3045677 | Msa0230830:CDS | 45.0% |
| !! | TTATAAATATATAAATATTC+CGG | - | chr2_2:3043437-3043456 | None:intergenic | 5.0% |
| CGTCCTGATTCCAAACTGTG+AGG | - | chr2_2:3043341-3043360 | None:intergenic | 50.0% | |
| ! | AGCTTTTGCAAGAGGAGAGG+TGG | + | chr2_2:3043529-3043548 | Msa0230830:CDS | 50.0% |
| GTGGTTGCAGACCGTTCAAT+TGG | + | chr2_2:3043582-3043601 | Msa0230830:CDS | 50.0% | |
| AGCTTGGGCCAAAACAACAC+AGG | - | chr2_2:3043788-3043807 | None:intergenic | 50.0% | |
| AGGGGGTTAGGAGGTAGTTA+TGG | + | chr2_2:3043873-3043892 | Msa0230830:intron | 50.0% | |
| GTGTATAGGTGGTTCCCACA+AGG | + | chr2_2:3044275-3044294 | Msa0230830:intron | 50.0% | |
| TGGTGGAGCTCTTCAATTGG+TGG | - | chr2_2:3044554-3044573 | None:intergenic | 50.0% | |
| TCTTGGAATTCCAGCTTCCC+AGG | + | chr2_2:3044576-3044595 | Msa0230830:CDS | 50.0% | |
| TGCTTCCATTGAGGACCAAG+AGG | - | chr2_2:3044629-3044648 | None:intergenic | 50.0% | |
| ! | AGTTTAGCTTCATGGGGCCA+AGG | + | chr2_2:3044669-3044688 | Msa0230830:CDS | 50.0% |
| ATGGTGTTCACGTAGAGCCT+TGG | - | chr2_2:3044689-3044708 | None:intergenic | 50.0% | |
| GCTCTACGTGAACACCATAC+CGG | + | chr2_2:3044691-3044710 | Msa0230830:CDS | 50.0% | |
| CTGGACGTCTAGGTATTCAG+TGG | + | chr2_2:3044729-3044748 | Msa0230830:CDS | 50.0% | |
| CTAGGTATTCAGTGGCAGAC+TGG | + | chr2_2:3044737-3044756 | Msa0230830:CDS | 50.0% | |
| GGTCTCCGTCTCTATCTAGA+AGG | + | chr2_2:3045104-3045123 | Msa0230830:CDS | 50.0% | |
| CTCAACTGTGTTGGGAGCTA+AGG | + | chr2_2:3045388-3045407 | Msa0230830:CDS | 50.0% | |
| AACTGTGTTGGGAGCTAAGG+AGG | + | chr2_2:3045391-3045410 | Msa0230830:CDS | 50.0% | |
| AGGAGGTAAAACATCCCGAG+TGG | + | chr2_2:3045408-3045427 | Msa0230830:CDS | 50.0% | |
| GGAGGTAAAACATCCCGAGT+GGG | + | chr2_2:3045409-3045428 | Msa0230830:CDS | 50.0% | |
| GTAAAACATCCCGAGTGGGA+TGG | + | chr2_2:3045413-3045432 | Msa0230830:CDS | 50.0% | |
| GAAAAGCCCCTGTGAAGTGT+TGG | - | chr2_2:3045487-3045506 | None:intergenic | 50.0% | |
| TTAACATCTGCTGGACGAGG+AGG | - | chr2_2:3045518-3045537 | None:intergenic | 50.0% | |
| AGAAGCTTGGGAGCTTGTAC+GGG | - | chr2_2:3045578-3045597 | None:intergenic | 50.0% | |
| TGGCTCAAGAATCCACTCCC+TGG | - | chr2_2:3043664-3043683 | None:intergenic | 55.0% | |
| ! | CGCGGATCGATTCTCCCTTT+GGG | - | chr2_2:3044064-3044083 | None:intergenic | 55.0% |
| ! | ACGCGGATCGATTCTCCCTT+TGG | - | chr2_2:3044065-3044084 | None:intergenic | 55.0% |
| GCATTATGGGTTCCTGGGTC+TGG | - | chr2_2:3044134-3044153 | None:intergenic | 55.0% | |
| AATTCCAGCTTCCCAGGCAG+TGG | + | chr2_2:3044582-3044601 | Msa0230830:CDS | 55.0% | |
| ATTCCAGCTTCCCAGGCAGT+GGG | + | chr2_2:3044583-3044602 | Msa0230830:CDS | 55.0% | |
| AATACAGGTGCCCACTGCCT+GGG | - | chr2_2:3044596-3044615 | None:intergenic | 55.0% | |
| GAGCTCCGTTGCTTCCATTG+AGG | - | chr2_2:3044638-3044657 | None:intergenic | 55.0% | |
| GTAGGTAAGAGGCCAGTGAC+TGG | + | chr2_2:3045083-3045102 | Msa0230830:CDS | 55.0% | |
| TAGAGACGGAGACCAGTCAC+TGG | - | chr2_2:3045098-3045117 | None:intergenic | 55.0% | |
| TCATGTGTGCACTGCTCCTG+TGG | + | chr2_2:3045274-3045293 | Msa0230830:CDS | 55.0% | |
| CACTGCTCCTGTGGAATCTG+AGG | + | chr2_2:3045283-3045302 | Msa0230830:CDS | 55.0% | |
| TGCTCCTGTGGAATCTGAGG+AGG | + | chr2_2:3045286-3045305 | Msa0230830:CDS | 55.0% | |
| AGCTCCTCCTCAGATTCCAC+AGG | - | chr2_2:3045293-3045312 | None:intergenic | 55.0% | |
| AATTCAGCGGTCTATCCGGG+CGG | + | chr2_2:3045542-3045561 | Msa0230830:CDS | 55.0% | |
| GAGCTTGTACGGGAACAGGA+GGG | - | chr2_2:3045568-3045587 | None:intergenic | 55.0% | |
| TTGGGAGCTTGTACGGGAAC+AGG | - | chr2_2:3045572-3045591 | None:intergenic | 55.0% | |
| TGAGATGACTAGAGGACCGC+AGG | + | chr2_2:3045616-3045635 | Msa0230830:CDS | 55.0% | |
| CAATAGCCAGGAGTCTCCTG+CGG | - | chr2_2:3045635-3045654 | None:intergenic | 55.0% | |
| GCAGGAGACTCCTGGCTATT+GGG | + | chr2_2:3045634-3045653 | Msa0230830:CDS | 55.0% | |
| CCAGTGACAACCCAATAGCC+AGG | - | chr2_2:3045647-3045666 | None:intergenic | 55.0% | |
| ! | CCTGGCTATTGGGTTGTCAC+TGG | + | chr2_2:3045644-3045663 | Msa0230830:CDS | 55.0% |
| GAATACAGGTGCCCACTGCC+TGG | - | chr2_2:3044597-3044616 | None:intergenic | 60.0% | |
| ACATCTGCTGGACGAGGAGG+CGG | - | chr2_2:3045515-3045534 | None:intergenic | 60.0% | |
| GGAGCTTGTACGGGAACAGG+AGG | - | chr2_2:3045569-3045588 | None:intergenic | 60.0% | |
| CGCAGGAGACTCCTGGCTAT+TGG | + | chr2_2:3045633-3045652 | Msa0230830:CDS | 60.0% | |
| TCCAGACTTGGCCCCTAGCC+CGG | - | chr2_2:3045444-3045463 | None:intergenic | 65.0% | |
| AGAGGACCGCAGGAGACTCC+TGG | + | chr2_2:3045626-3045645 | Msa0230830:CDS | 65.0% | |
| GTGCCCACTGCCTGGGAAGC+TGG | - | chr2_2:3044589-3044608 | None:intergenic | 70.0% | |
| CCGGGAGACCCATCCCACTC+GGG | - | chr2_2:3045425-3045444 | None:intergenic | 70.0% | |
| CCCGAGTGGGATGGGTCTCC+CGG | + | chr2_2:3045422-3045441 | Msa0230830:CDS | 70.0% | |
| CCCGGGAGACCCATCCCACT+CGG | - | chr2_2:3045426-3045445 | None:intergenic | 70.0% | |
| CCGAGTGGGATGGGTCTCCC+GGG | + | chr2_2:3045423-3045442 | Msa0230830:CDS | 70.0% | |
| TGGGATGGGTCTCCCGGGCT+AGG | + | chr2_2:3045428-3045447 | Msa0230830:CDS | 70.0% | |
| GGGATGGGTCTCCCGGGCTA+GGG | + | chr2_2:3045429-3045448 | Msa0230830:CDS | 70.0% | |
| ! | GGATGGGTCTCCCGGGCTAG+GGG | + | chr2_2:3045430-3045449 | Msa0230830:CDS | 70.0% |
| CCAGACTTGGCCCCTAGCCC+GGG | - | chr2_2:3045443-3045462 | None:intergenic | 70.0% | |
| ! | CCCGGGCTAGGGGCCAAGTC+TGG | + | chr2_2:3045440-3045459 | Msa0230830:CDS | 75.0% |
| ACGGGAACAGGAGGGCCGCC+CGG | - | chr2_2:3045560-3045579 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 3043310 | 3045781 | 3043310 | ID=Msa0230830;Name=Msa0230830 |
| chr2_2 | mRNA | 3043310 | 3045781 | 3043310 | ID=Msa0230830-mRNA-1;Parent=Msa0230830;Name=Msa0230830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|4|0|417 |
| chr2_2 | exon | 3043310 | 3043414 | 3043310 | ID=Msa0230830-mRNA-1:exon:1083;Parent=Msa0230830-mRNA-1 |
| chr2_2 | exon | 3043520 | 3043706 | 3043520 | ID=Msa0230830-mRNA-1:exon:1084;Parent=Msa0230830-mRNA-1 |
| chr2_2 | exon | 3044546 | 3044802 | 3044546 | ID=Msa0230830-mRNA-1:exon:1085;Parent=Msa0230830-mRNA-1 |
| chr2_2 | exon | 3045077 | 3045781 | 3045077 | ID=Msa0230830-mRNA-1:exon:1086;Parent=Msa0230830-mRNA-1 |
| chr2_2 | CDS | 3043310 | 3043414 | 3043310 | ID=Msa0230830-mRNA-1:cds;Parent=Msa0230830-mRNA-1 |
| chr2_2 | CDS | 3043520 | 3043706 | 3043520 | ID=Msa0230830-mRNA-1:cds;Parent=Msa0230830-mRNA-1 |
| chr2_2 | CDS | 3044546 | 3044802 | 3044546 | ID=Msa0230830-mRNA-1:cds;Parent=Msa0230830-mRNA-1 |
| chr2_2 | CDS | 3045077 | 3045781 | 3045077 | ID=Msa0230830-mRNA-1:cds;Parent=Msa0230830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
